HHsearch alignment for GI: 254780959 and conserved domain: COG2268
>COG2268 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.73 E-value=3e-15 Score=135.29 Aligned_cols=164 Identities=20% Similarity=0.269 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHH--HEEEECCCCEEEEEEC---------CEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCCCC
Q ss_conf 99999999999983--0079578757999975---------857655228971898076322003799987520134433
Q gi|254780959|r 9 FFLFIFLLLGLSFS--SFFIVDARQQAIVTRF---------GKIHATYREPGIYFKMPFSFMNVDRVKYLQKQIMRLNLD 77 (302)
Q Consensus 9 ~~v~i~~~~~~~~~--~~~~V~~~e~~Vv~rf---------Gk~~~~~~~pGlhfk~P~~~~~i~~v~~~~~r~~~~~~~ 77 (302)
T Consensus 17 vvv~i~~ilv~if~~~~~y~~a~~~~aLI~~g~~~g~~~~~g~~~~vV~-gGg~~v~Pi----~q~~~r~~l~~i~l~v~ 91 (548)
T COG2268 17 VVVVILVILVLIFFGKRFYIIARPNEALIRTGSKLGSKDEAGGGQKVVR-GGGAIVMPI----FQTIERMSLTTIKLEVE 91 (548)
T ss_pred HHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEE-CCCEEEECE----EEEEEEEEEEEEEEEEE
T ss_conf 9999999999999742379961888469984564577643457753785-586488430----56667743157421003
Q ss_pred CCHHCCCCCCCCCCCCCCCEEEEC----CCHHHHHCCCC--HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 100001122210124332101201----10122201331--334664346777876531011242000001210015899
Q gi|254780959|r 78 NIRVQVSDGKFYEVDAMMTYRIID----PSLFCQSVSCD--RIAAESRLRTRLDASIRRVYGLRRFDDALSKQREKMMME 151 (302)
Q Consensus 78 ~~~v~T~D~~~v~vd~~v~yrI~d----p~~~~~~~~~~--~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~~R~~i~~~ 151 (302)
T Consensus 92 ~~~v~t~Dg~p~~v~~~a~v~i~~~~~dI~~aae~~g~Kg~~~~l~~~~~~~l~~~lR~i~a~~t~~el~-edR~~F~~~ 170 (548)
T COG2268 92 IDNVYTKDGMPLNVEAVAYVKIGDTFQDIATAAERFGGKGSREDLEQLAEDTLEGALRAVLAQMTVEELN-EDRLGFAQV 170 (548)
T ss_pred EEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHH
T ss_conf 4016735997443056899883687889999999854535799999999999999999998755999874-667627999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEHHHHHH
Q ss_conf 999998874221443100000011110
Q gi|254780959|r 152 VCEDLRYDAEKLGISIEDVRVLRTDLT 178 (302)
Q Consensus 152 v~~~l~~~~~~~GI~I~~V~I~~i~~p 178 (302)
T Consensus 171 V~~~v~~dL~k~Gl~l~s~~I~~i~d~ 197 (548)
T COG2268 171 VQEVVGDDLSKMGLVLDSLAINDINDT 197 (548)
T ss_pred HHHHHHHHHHHCCEEEEEEEECCCCCC
T ss_conf 999988888755736522342465455