HHsearch alignment for GI: 254780959 and conserved domain: PRK11029
>PRK11029 FtsH protease regulator HflC; Provisional.
Probab=97.28 E-value=0.0027 Score=44.37 Aligned_cols=90 Identities=13% Similarity=0.210 Sum_probs=59.7
Q ss_pred HHCCCCCCCCEEHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 221443100000011110124455-------4311289999988776788999976557788999997689899998886
Q gi|254780959|r 161 EKLGISIEDVRVLRTDLTQEVSQQ-------TYDRMKAERLAEAEFIRARGREEGQKRMSIADRKATQILSEARRDSEIN 233 (302)
Q Consensus 161 ~~~GI~I~~V~I~~i~~p~~i~~a-------i~~~~~ae~~~~A~~~~a~~~~ea~~~~a~ae~~~~~i~AeA~~~a~~~ 233 (302)
T Consensus 204 eVvdV~ikrid~P~~-v~~av~~rM~aER~~~A~~~raeG~~~a~~Ira~ad~e~~~i~AeA~r~a~~irgegdAea~~i 282 (334)
T PRK11029 204 EVVDVRIKQINLPTE-VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKL 282 (334)
T ss_pred EEEEEEEEECCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999874489889-9999999999999999999998789999998988888889998889989999983788999999
Q ss_pred HHHHHHH-----HHHHHHHHHHH
Q ss_conf 3387899-----99999999875
Q gi|254780959|r 234 YGKGEAE-----RGRILSNVFQK 251 (302)
Q Consensus 234 ~A~aeA~-----a~~~~~~a~~~ 251 (302)
T Consensus 283 ya~Ay~kdpefy~f~rsLeay~~ 305 (334)
T PRK11029 283 FADAFSQDPDFYAFIRSLRAYEN 305 (334)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99997339899999999999999