HHsearch alignment for GI: 254780959 and conserved domain: cd03402

>cd03402 Band_7_2 A subgroup of the band 7 domain of flotillin (reggie) like proteins. This subgroup contains proteins similar to stomatin, prohibitin, flotillin, HlfK/C and podicin. Many of these band 7 domain-containing proteins are lipid raft-associated. Individual proteins of this band 7 domain family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic H
Probab=99.97  E-value=1.5e-30  Score=251.68  Aligned_cols=172  Identities=18%  Similarity=0.356  Sum_probs=155.5

Q ss_pred             HEEEECCCCEEEEEECCEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEECC
Q ss_conf             00795787579999758576552289718980763220037999875201344331000011222101243321012011
Q gi|254780959|r   23 SFFIVDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNVDRVKYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIIDP  102 (302)
Q Consensus        23 ~~~~V~~~e~~Vv~rfGk~~~~~~~pGlhfk~P~~~~~i~~v~~~~~r~~~~~~~~~~v~T~D~~~v~vd~~v~yrI~dp  102 (302)
T Consensus         1 G~~iV~p~ea~Vv~~FGky~gti~~pGL~~~~Pf----~~~~-~vd~R~~~~d~~~q~v~t~D~~~i~IdavV~wrV~Dp   75 (219)
T cd03402           1 GLFVVEPNQARVLVLFGRYIGTIRRTGLRWVNPF----SSKK-RVSLRVRNFESEKLKVNDANGNPIEIAAVIVWRVVDT   75 (219)
T ss_pred             CCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEE----EEEE-EEEEEEEEECCCCEEEECCCCCEEEEEEEEEEEECCH
T ss_conf             9389782655688733770575468982899626----8789-9730589751686575848999899989999998488


Q ss_pred             CHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHH
Q ss_conf             012220133133466434677787653101124200000------12100158999999988742214431000000111
Q gi|254780959|r  103 SLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDAL------SKQREKMMMEVCEDLRYDAEKLGISIEDVRVLRTD  176 (302)
Q Consensus       103 ~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l------~~~R~~i~~~v~~~l~~~~~~~GI~I~~V~I~~i~  176 (302)
T Consensus        76 ~kA~~~V~n~----~~~v~~~aetaLR~v~g~~~~D~~~~~~~~L~~~rd~I~~~l~~~l~e~~~~~GI~V~~vrIk~i~  151 (219)
T cd03402          76 AKAVFNVDDY----EEFVHIQSESALRHVASQYPYDDPVNKETSLRGNSDEVSDELARELQERLAVAGVEVVEARITHLA  151 (219)
T ss_pred             HHHHHHCCCH----HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf             9998742659----999999999999998623674101013455514899999999999877766309799999972535


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             101244554311289999988776788
Q gi|254780959|r  177 LTQEVSQQTYDRMKAERLAEAEFIRAR  203 (302)
Q Consensus       177 ~p~~i~~ai~~~~~ae~~~~A~~~~a~  203 (302)
T Consensus       152 ~p~eIa~AM~~r~qAea~~~aR~~ive  178 (219)
T cd03402         152 YAPEIAQAMLQRQQASAIIAARRKIVE  178 (219)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             989999999999999999999999987