>cd03404 Band_7_HflK Band_7_HflK: The band 7 domain of flotillin (reggie) like proteins. This group includes proteins similar to prokaryotic HlfK (High frequency of lysogenization K). Although many members of the band 7 family are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this band 7 domain family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflK is an integral membrane protein which may localize to the plasma membrane. HflK associates with another band 7 family member (HflC) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during la

Probab=100.00 E-value=0 Score=370.62 Aligned_cols=251 Identities=25% Similarity=0.327 Sum_probs=220.3 Q ss_pred HHHHHHHHHHHHHEEEECCCCEEEEEECCEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCC------------CCC Q ss_conf 99999999998300795787579999758576552289718980763220037999875201344------------331 Q gi|254780959|r 11 LFIFLLLGLSFSSFFIVDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNVDRVKYLQKQIMRLN------------LDN 78 (302) Q Consensus 11 v~i~~~~~~~~~~~~~V~~~e~~Vv~rfGk~~~~~~~pGlhfk~P~~~~~i~~v~~~~~r~~~~~------------~~~ 78 (302) T Consensus 2 i~~~~~~~~~~ss~~~V~~~e~~Vv~rfGk~~~~-~~pGlhf~iP~~~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (266) T cd03404 2 IAALLVILWLLSGFYIVQPGERGVVLRFGKYSRT-VEPGLHWKLPYPIEVVE---VVPVFQLRSVGIPVRVGSVRSVPGE 77 (266) T ss_pred CHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCC-CCCCEEEEECCEEEEEE---EEEEEEEEECCCCCCCCCCCCCCCC T ss_conf 2689999999966899889848998876986673-48976899477079999---9877899951576334444566521 Q ss_pred CHHCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 00001122210124332101201101222013313346643467778765310112420000012100158999999988 Q gi|254780959|r 79 IRVQVSDGKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSKQREKMMMEVCEDLRY 158 (302) Q Consensus 79 ~~v~T~D~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~~R~~i~~~v~~~l~~ 158 (302) T Consensus 78 ~~~lT~D~~~v~vd~~v~yrI~dp~~~~~~~~~----~~~~l~~~~~~~lR~~ig~~~lde~l~~~R~~i~~~i~~~l~~ 153 (266) T cd03404 78 SLMLTGDENIVDVEFAVQYRISDPYDYLFNVRD----PEGTLRQAAESAMREVVGRSTLDDVLTEGREEIAQDVRELLQA 153 (266) T ss_pred CEEECCCCCEEEEEEEEEEEECCHHHHHHHCCC----HHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHH T ss_conf 215616898899999999998868998886258----9999999999999999726606888643799999999999999 Q ss_pred HHHHC--CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74221--4431000000111101244554311289999988776788999976557788999997689899998886338 Q gi|254780959|r 159 DAEKL--GISIEDVRVLRTDLTQEVSQQTYDRMKAERLAEAEFIRARGREEGQKRMSIADRKATQILSEARRDSEINYGK 236 (302) Q Consensus 159 ~~~~~--GI~I~~V~I~~i~~p~~i~~ai~~~~~ae~~~~A~~~~a~~~~ea~~~~a~ae~~~~~i~AeA~~~a~~~~A~ 236 (302) T Consensus 154 ~~~~~~~GI~v~~V~i~~i~~P~~v~~a~~~~~~A~~e~~~~~~~ae~~a~~~~~~A~~ea~~~~~~Aea~~~~~~~~ae 233 (266) T cd03404 154 ILDAYKAGIEIVGVNLQDADPPEEVQDAFDDVNKARQDRERLINEAEAYANEVVPKARGEAARIIQEAEAYKEEVIAEAQ 233 (266) T ss_pred HHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 87345686799999975269989999999999999999999999999999999999888999999999999999998724 Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH Q ss_conf 789999999999875799999999999999983 Q gi|254780959|r 237 GEAERGRILSNVFQKDPEFFEFYRSMRAYTDSL 269 (302) Q Consensus 237 aeA~a~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 269 (302) T Consensus 234 geA~~~~~~~~ay~k~P~~~~~~~~l~~~~~~l 266 (266) T cd03404 234 GEAARFESLLAEYKKAPDVTRERLYLETMEEVL 266 (266) T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC T ss_conf 369999999999986979999999999999859

HHsearch alignment for GI: 254780959 and conserved domain: cd03404