HHsearch alignment of GI: 254780959 and MMDB domain: 2rpb_A_
>2rpb_A (A:) Hypothetical membrane protein; SPFH domain; NMR {Pyrococcus horikoshii}
Probab=99.57 E-value=7.2e-16 Score=139.59 Aligned_cols=112 Identities=21% Similarity=0.303 Sum_probs=104.5
Q ss_pred EEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99987520134433100001122210124332101201101222013313346643467778765310112420000012
Q gi|254780959|r 64 VKYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSK 143 (302)
Q Consensus 64 v~~~~~r~~~~~~~~~~v~T~D~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~ 143 (302)
|..+|+|.++++.++++++|+|++.+.++++++|||.||.++++++.+ ++..|.+.+++++|+++|+|+++++++
T Consensus 2 v~~vd~r~~~~~~~~~~v~T~D~~~v~v~~~v~yrI~d~~~~~~~~~~----~~~~l~~~~~~alr~~~~~~~~~el~~- 76 (113)
T 2rpb_A 2 SDHVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSD----FLMAIVKLAQTNLRAIIGEMELDETLS- 76 (113)
T ss_dssp CSCCCCCCEEEECCCEEEECTTSCEEEECEEEEEEESCTTTCTTTTTH----HHHHHHHHHHHHHHHHHTSCCTTHHHH-
T ss_pred CCCEEEEEEEECCCCCEEECCCCCEEEEEEEEEEEECCHHHHHEECCC----HHHHHHHHHHHHHHHHHHHCCHHHHHH-
T ss_conf 961752688225898576838999999989999998876887212799----999999999999999986553999982-
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
Q ss_conf 1001589999999887422144310000001111012
Q gi|254780959|r 144 QREKMMMEVCEDLRYDAEKLGISIEDVRVLRTDLTQE 180 (302)
Q Consensus 144 ~R~~i~~~v~~~l~~~~~~~GI~I~~V~I~~i~~p~~ 180 (302)
+|+++++++++.+++.+++|||+|.+|+|++++||++
T Consensus 77 ~R~~i~~~i~~~l~~~l~~~Gi~i~~v~I~~i~~p~e 113 (113)
T 2rpb_A 77 GRDIINARLREELDKITDRWGVKITRVEIQRIDPPKD 113 (113)
T ss_dssp CHHHHHHHHHHHHHHHHGGGTEECCCEEECCCBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCC
T ss_conf 5999999999989877602698999999985219589