HHsearch alignment of GI: 254780959 and MMDB domain: 2rpb_A_

>2rpb_A (A:) Hypothetical membrane protein; SPFH domain; NMR {Pyrococcus horikoshii}
Probab=99.57  E-value=7.2e-16  Score=139.59  Aligned_cols=112  Identities=21%  Similarity=0.303  Sum_probs=104.5

Q ss_pred             EEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99987520134433100001122210124332101201101222013313346643467778765310112420000012
Q gi|254780959|r   64 VKYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLRTRLDASIRRVYGLRRFDDALSK  143 (302)
Q Consensus        64 v~~~~~r~~~~~~~~~~v~T~D~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~~~~~l~~~~~~~lr~v~~~~~~~e~l~~  143 (302)
                      |..+|+|.++++.++++++|+|++.+.++++++|||.||.++++++.+    ++..|.+.+++++|+++|+|+++++++ 
T Consensus         2 v~~vd~r~~~~~~~~~~v~T~D~~~v~v~~~v~yrI~d~~~~~~~~~~----~~~~l~~~~~~alr~~~~~~~~~el~~-   76 (113)
T 2rpb_A            2 SDHVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSD----FLMAIVKLAQTNLRAIIGEMELDETLS-   76 (113)
T ss_dssp             CSCCCCCCEEEECCCEEEECTTSCEEEECEEEEEEESCTTTCTTTTTH----HHHHHHHHHHHHHHHHHTSCCTTHHHH-
T ss_pred             CCCEEEEEEEECCCCCEEECCCCCEEEEEEEEEEEECCHHHHHEECCC----HHHHHHHHHHHHHHHHHHHCCHHHHHH-
T ss_conf             961752688225898576838999999989999998876887212799----999999999999999986553999982-


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
Q ss_conf             1001589999999887422144310000001111012
Q gi|254780959|r  144 QREKMMMEVCEDLRYDAEKLGISIEDVRVLRTDLTQE  180 (302)
Q Consensus       144 ~R~~i~~~v~~~l~~~~~~~GI~I~~V~I~~i~~p~~  180 (302)
                      +|+++++++++.+++.+++|||+|.+|+|++++||++
T Consensus        77 ~R~~i~~~i~~~l~~~l~~~Gi~i~~v~I~~i~~p~e  113 (113)
T 2rpb_A           77 GRDIINARLREELDKITDRWGVKITRVEIQRIDPPKD  113 (113)
T ss_dssp             CHHHHHHHHHHHHHHHHGGGTEECCCEEECCCBCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCC
T ss_conf             5999999999989877602698999999985219589