BLAST/PSIBLAST alignment of GI: 254780959 and GI: 116252996 at iteration 1
>gi|116252996|ref|YP_768834.1| transmembrane serine protease [Rhizobium leguminosarum bv. viciae 3841] Length = 321
>gi|115257644|emb|CAK08741.1| putative transmembrane serine protease [Rhizobium leguminosarum bv. viciae 3841] Length = 321
Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/288 (57%), Positives = 224/288 (77%), Gaps = 1/288 (0%)
Query: 2 SNKSCISFFLFIFLLLGLSFSSFFIVDARQQAIVTRFGKIHATYREPGIYFKMPFSFMNV 61
SN+ I F + +L+GL +SS F+V+AR+QAIV RFG+I + EPGIYFK+PF FM+
Sbjct: 3 SNRLPIIFIILAIVLVGL-YSSIFVVNAREQAIVVRFGQIQSVKTEPGIYFKLPFGFMDA 61
Query: 62 DRVKYLQKQIMRLNLDNIRVQVSDGKFYEVDAMMTYRIIDPSLFCQSVSCDRIAAESRLR 121
DRV+ ++KQ +RL+LDNIRVQV DG+ ++VDA + Y I D F ++VS DR AAE+RLR
Sbjct: 62 DRVQLVEKQALRLDLDNIRVQVQDGQTFDVDAFVIYNIADVRRFRETVSGDREAAEARLR 121
Query: 122 TRLDASIRRVYGLRRFDDALSKQREKMMMEVCEDLRYDAEKLGISIEDVRVLRTDLTQEV 181
+LD+S+RRVYGLR ++ ALS++R MM+E+ +DLR DAE LG+ I+DVR+ RTDL+ EV
Sbjct: 122 AQLDSSLRRVYGLRDYNAALSEERVAMMLEIRDDLRTDAENLGLHIDDVRIRRTDLSPEV 181
Query: 182 SQQTYDRMKAERLAEAEFIRARGREEGQKRMSIADRKATQILSEARRDSEINYGKGEAER 241
+ TY+ M++ERLAEAE IRA G EEGQ+R +IADR+ + + A+RD+EI G+G+AER
Sbjct: 182 APNTYNAMRSERLAEAERIRAEGNEEGQRRRAIADRQVVEFTAGAQRDAEILRGQGDAER 241
Query: 242 GRILSNVFQKDPEFFEFYRSMRAYTDSLASSDTFLVLSPDSDFFKYFD 289
R+ + VF KDP FFEFYRSM AY+ +L+S DT LVLSP+S+FF+YFD
Sbjct: 242 NRVFAEVFSKDPAFFEFYRSMAAYSSALSSQDTTLVLSPNSEFFRYFD 289