HHsearch alignment for GI: 254780960 and conserved domain: COG4087

Probab=99.29  E-value=1.3e-11  Score=89.87  Aligned_cols=108  Identities=18%  Similarity=0.194  Sum_probs=91.0

Q ss_pred             HHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             42113454338999999841986999816723422322655086413431010000000000156310521138877532
Q gi|254780960|r  148 EKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKDDRLTGQVMEPIIDGTAKSQILLEA  227 (297)
Q Consensus       148 ~~~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~~lgi~~~~a~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~l  227 (297)
T Consensus        26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------rv~a~a~~e~K~~i   85 (152)
T COG4087          26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------RVFAGADPEMKAKI   85 (152)
T ss_pred             CCCCEECHHHHHHHHHHHHH-HEEEEECCCCCHHHHHHHHHCCCCEE-------------------EEECCCCHHHHHHH
T ss_conf             01867707557899999876-13788428732379999987399605-------------------11034678789999


Q ss_pred             HHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEE----CCCHHHHHHCCEEEE
Q ss_conf             331037766799997892348899848931898----795789985898995
Q gi|254780960|r  228 IQKLQINPEDTIAVGDGNNDLDMLRVAGYGVAF----HAKPALAKQAKIRID  275 (297)
Q Consensus       228 ~~~~~~~~~~v~avGDg~ND~pmL~~AgvGVA~----~a~~~v~~~Ad~~~~  275 (297)
T Consensus        86 i~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik  137 (152)
T COG4087          86 IRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK  137 (152)
T ss_pred             HHHHCCCCCEEEEECCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHCHHHHH
T ss_conf             9984477717999647752277765312314896368841677751213445