HHsearch alignment for GI: 254780960 and conserved domain: KOG3085
>KOG3085 consensus.
Probab=96.80 E-value=0.019 Score=33.71 Aligned_cols=179 Identities=20% Similarity=0.296 Sum_probs=95.5
Q ss_pred CCCCEEEECCCEEEEE--CCC---CHHHHHHHHCCCHHHHH---HHHHH-------------HCCCCCHHHHHHHHHHHH
Q ss_conf 5344487227502652--452---00278874122327788---87652-------------024410012345568764
Q gi|254780960|r 78 RRKNLLIADMDSTMIE--QEC---IDELADLIGIKEKVSLI---TARAM-------------NGEIPFQDSLRERISLFK 136 (297)
Q Consensus 78 ~~~~l~~~d~d~tli~--~~~---l~~~a~~~~~~~~~~~~---~~~~~-------------~~~~~~~~~~~~~~~~~~ 136 (297)
T Consensus 5 ~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~f 84 (237)
T KOG3085 5 MRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVESTF 84 (237)
T ss_pred CCEEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 42579999578723403785188999999995898787887676667787621358854545786668999999999983
Q ss_pred HHHHH----HHHH------HHH---HHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHH
Q ss_conf 20045----6898------874---2113454338999999841986999816723422322655086413431010000
Q gi|254780960|r 137 GTSTK----IIDS------LLE---KKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGFDQYYANRFIEKD 203 (297)
Q Consensus 137 ~~~~~----~~~~------~~~---~~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~~lgi~~~~a~~~~~~~ 203 (297)
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~vv~--- 160 (237)
T KOG3085 85 GKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDFVVE--- 160 (237)
T ss_pred CCCCCHHHHHHHHHHHHHEECCCCCCCCEECCHHHHHHHHHHHCCEEEEEECCCCHHH-HHHHHCCCHHHHHHHHHH---
T ss_conf 2255036788776530200102355572116379999999986793999952772777-777640187876335311---
Q ss_pred HCCCCCCCCCCCCHHHHH--HHHHHHHHHHCCCCCEEEEEECC-CCHHHHHHHCCCE-EEE-CCCHHHHHH
Q ss_conf 000000156310521138--87753233103776679999789-2348899848931-898-795789985
Q gi|254780960|r 204 DRLTGQVMEPIIDGTAKS--QILLEAIQKLQINPEDTIAVGDG-NNDLDMLRVAGYG-VAF-HAKPALAKQ 269 (297)
Q Consensus 204 ~~~~~~~~~~~~~~~~k~--~~~~~l~~~~~~~~~~v~avGDg-~ND~pmL~~AgvG-VA~-~a~~~v~~~ 269 (297)
T Consensus 161 ---------S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085 161 ---------SCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred ---------HHHHCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHCCCEEEEECCCCCHHHHH
T ss_conf ---------43424678986899999988189968868846853212276897497799972565232433