HHsearch alignment for GI: 254780960 and conserved domain: KOG3128
>KOG3128 consensus.
Probab=94.94 E-value=0.035 Score=32.12 Aligned_cols=168 Identities=16% Similarity=0.219 Sum_probs=96.2
Q ss_pred HHHHCCCCC-HHHHHHHHHHHH--HHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCC
Q ss_conf 652024410-012345568764--2004568988-742113454338999999841986999816723422322655086
Q gi|254780960|r 116 RAMNGEIPF-QDSLRERISLFK--GTSTKIIDSL-LEKKITYNPGGYELVHTMKQNGASTLLVTGGFSIFARFIAQHLGF 191 (297)
Q Consensus 116 ~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~~g~~v~iisg~~~~~~~~ia~~lgi 191 (297)
T Consensus 98 ltieEKvp~MeeWW~kSH~Lliq~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~ 177 (298)
T KOG3128 98 LTIEEKVPHMEEWWTKSHELLIQGGFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLV 177 (298)
T ss_pred CCHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHC
T ss_conf 77665033899998306554345885778999999970499998799999999847986588733107899999998721
Q ss_pred ----CHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHH-HHHHHHHH--CCCCCEEEEEECCCCHHHHHHHC-CC----EEE
Q ss_conf ----41343101000000000015631052113887-75323310--37766799997892348899848-93----189
Q gi|254780960|r 192 ----DQYYANRFIEKDDRLTGQVMEPIIDGTAKSQI-LLEAIQKL--QINPEDTIAVGDGNNDLDMLRVA-GY----GVA 259 (297)
Q Consensus 192 ----~~~~a~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~l~~~~--~~~~~~v~avGDg~ND~pmL~~A-gv----GVA 259 (297)
T Consensus 178 ~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig 257 (298)
T KOG3128 178 LHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIG 257 (298)
T ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCCCEEEE
T ss_conf 27417765115543321003210278998870631887766678852168816999545213121302875556523541
Q ss_pred E-C-----CCHHHHHHCCEEEECCCHHHHH
Q ss_conf 8-7-----9578998589899569832767
Q gi|254780960|r 260 F-H-----AKPALAKQAKIRIDHSDLEALL 283 (297)
Q Consensus 260 ~-~-----a~~~v~~~Ad~~~~~~dl~~~l 283 (297)
T Consensus 258 ~l~d~vee~~~~ymd~ydIvL~~D~tldv~ 287 (298)
T KOG3128 258 YLNDSVEEALEKYMDSYDIVLVHDETLDVA 287 (298)
T ss_pred CCCCHHHHHHHHHHHHCCEEEECCCCCCHH
T ss_conf 023458999998776606588528531066