HHsearch alignment for GI: 254780961 and conserved domain: TIGR01703
>TIGR01703 hybrid_clust hydroxylamine reductase; InterPro: IPR010048 Hybrid cluster proteins (HCP, or Prismane) have been identified in bacteria, archaea and eukaryotic protozoa. No specific function has yet been assigned to these proteins, but it may involve oxidoreductase enzymatic activity. These proteins contain one 4Fe-4S cluster, and one hybrid 4Fe-2O-2S cluster, the latter being similar to the Ni-Fe-S cluster found in carbon monoxide dehydrogenase enzymes (IPR010047 from INTERPRO) , . This subfamily is heterogeneous with respect to the presence or absence of a region of about 100 amino acids not far from the N terminus of the protein. Members have been described as monomeric. ; GO: 0016661 oxidoreductase activity acting on other nitrogenous compounds as donors, 0051536 iron-sulfur cluster binding, 0006118 electron transport, 0005737 cytoplasm.
Probab=90.31 E-value=0.54 Score=26.31 Aligned_cols=65 Identities=20% Similarity=0.319 Sum_probs=56.2
Q ss_pred CCCCCCCCHHHHHHHHHHH-HHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 7985367889999999999-980998878995136885676898621788876673111289989828999999999999
Q gi|254780961|r 97 SKQSIDMDPQLFDFLWEIQ-QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175 (200)
Q Consensus 97 ~~~~~~mDp~lld~L~~i~-~~~g~~~Pi~I~SGYRsp~~N~~lr~~~~G~Ak~S~H~~G~A~Di~i~g~~~~~l~~~a~ 175 (200)
T Consensus 209 ~LE~Gk~~l~~M~LLDkAnT~tyG~PepT~V~ig----------------------~~~g~a--ILvsGHDL~DL~~LL~ 264 (567)
T TIGR01703 209 ALEVGKMNLEAMKLLDKANTDTYGEPEPTEVNIG----------------------TLEGKA--ILVSGHDLKDLEELLE 264 (567)
T ss_pred HHCCCEECHHHHHHHHHHHHHCCCCCCCEEECCC----------------------CCCCCE--EEEECCCHHHHHHHHH
T ss_conf 7503700024765642352424789521055153----------------------466874--6875688899999999
Q ss_pred HCCC----CEEEEE
Q ss_conf 6399----847873
Q gi|254780961|r 176 RLKR----GGVGYY 185 (200)
Q Consensus 176 ~~~~----gGvG~Y 185 (200)
T Consensus 265 QT~gmGle~GinVY 278 (567)
T TIGR01703 265 QTEGMGLETGINVY 278 (567)
T ss_pred HHHHCCCCCCCCEE
T ss_conf 87415644575435