HHsearch alignment of GI: 254780961 and MMDB domain: 1vhh_A_
>1vhh_A (A:) Sonic hedgehog, HHG-1, VHH-1; signalling protein; 1.70A {Mus musculus}
Probab=97.14 E-value=0.0052 Score=38.14 Aligned_cols=88 Identities=19% Similarity=0.183 Sum_probs=68.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH-----CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHH-
Q ss_conf 27985367889999999999980-----998878995136885676898621788876673111289989828999999-
Q gi|254780961|r 96 HSKQSIDMDPQLFDFLWEIQQYF-----SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS- 169 (200)
Q Consensus 96 R~~~~~~mDp~lld~L~~i~~~~-----g~~~Pi~I~SGYRsp~~N~~lr~~~~G~Ak~S~H~~G~A~Di~i~g~~~~~- 169 (200)
.++.-.-|..++-+.|..+.... |. -+.|+-|+..+.+ -+.+|+|-.|+|+||...+.+..+
T Consensus 59 ~tgadR~MtkRck~kLn~La~~VmnqWpgV--kLrV~eaWde~~~----------~~~~sLHyeGRAvdittsd~d~sk~ 126 (162)
T 1vhh_A 59 NTGADRLMTQRCKDKLNALAISVMNQWPGV--KLRVTEGWDEDGH----------HSEESLHYEGRAVDITTSDRDRSKY 126 (162)
T ss_dssp SSSGGGEECHHHHHHHHHHHHHHHHHSTTC--CEEEEECSCSSCC----------SCTTCGGGGTCEEEEEETTCCGGGH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--EEEEEEEECCCCC----------CCCCCCCCCCEEEEEEECCCCHHHH
T ss_conf 877403563999999999999999867872--6887751326787----------7876534455167888357987899
Q ss_pred --HHHHHHHCCCCEEEEE-CCEEEEECCC
Q ss_conf --9999996399847873-8846886698
Q gi|254780961|r 170 --LYKIAIRLKRGGVGYY-SKFLHIDVGR 195 (200)
Q Consensus 170 --l~~~a~~~~~gGvG~Y-s~FVHiD~gp 195 (200)
|++.|...++.=|-|- .++||+-+-+
T Consensus 127 g~Larlav~AGFDWV~Yes~~hihcSVk~ 155 (162)
T 1vhh_A 127 GMLARLAVEAGFDWVYYESKAHIHCSVKA 155 (162)
T ss_dssp HHHHHHHHHTTCSEEEEEETTEEEEECCC
T ss_pred HHHHHHHHHCCCCEEEECCCCEEEEEEEC
T ss_conf 99999998718987986267459999853