HHsearch results for GI: 254780961 and protein with PDBid: 1lbu_A
>1lbu_A Muramoyl-pentapeptide carboxypeptidase; hydrolase, nuclear receptor; 1.80A {Streptomyces albus G} SCOP: a.20.1.1 d.65.1.1
Probab=99.75 E-value=9.9e-18 Score=126.24 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=93.1
Q ss_pred CCCEECHHHHHHHHHHHCCCCCCCC-----------------------CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 3983489999999887265427985-----------------------36788999999999998099887899513688
Q gi|254780961|r 76 RGSQYNQEGLSQLNRLLYDWHSKQS-----------------------IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132 (200)
Q Consensus 76 ~~g~y~~~~l~~l~~~lRD~R~~~~-----------------------~~mDp~lld~L~~i~~~~g~~~Pi~I~SGYRs 132 (200)
.+|...+.-+.+|+-..++.-+... ....+++...|..++..++. .|+.|+|+|||
T Consensus 61 ~dG~~g~~T~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~L~~~r~~~g~-~pi~i~s~~Rs 139 (213)
T 1lbu_A 61 ADGIAGPATFNKIYQLQDDDCTPVNFTYAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRHAMGD-KPITVNGGFRS 139 (213)
T ss_dssp CSSCBCHHHHHHHHHHBCTTSSBTTCCTTTTCSSCSSCCSSSSCHHHHHHHHHHHHHHHHHHHHHTTS-CCCCEEECCCC
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEECCCCCC
T ss_conf 99849999999998665246655566778876404777888666442210068999999999997488-42630576238
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEE---EEE--CCEEEEECCCCCCCC
Q ss_conf 56768986217888766731112899898289999999999996399847---873--884688669864479
Q gi|254780961|r 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV---GYY--SKFLHIDVGRVRSWT 200 (200)
Q Consensus 133 p~~N~~lr~~~~G~Ak~S~H~~G~A~Di~i~g~~~~~l~~~a~~~~~gGv---G~Y--s~FVHiD~gp~R~Wt 200 (200)
|.+|..+ +++++|+|+.|.|+||.+.+.+..++.+.++++++.|+ |+| ++|||+|++|.|.|+
T Consensus 140 ~~~n~~v-----~ga~~S~H~~G~A~DI~i~~~~~~~l~~~a~~~g~~gi~g~g~~~~~~fiHiD~~~~r~W~ 207 (213)
T 1lbu_A 140 VTCNSNV-----GGASNSRHMYGHAADLGAGSQGFCALAQAARNHGFTEILGPGYPGHNDHTHVAGGDGRFWS 207 (213)
T ss_dssp HHHHHHH-----TCCTTCGGGGTCEEEECCTTTCHHHHHHHGGGTTCSEEECTTSTTCSSSEEEECSSSCEEE
T ss_pred HHHHHHH-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCC
T ss_conf 8886764-----3688873235543314158869999999999769986502411799997881799987679