BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780961|ref|YP_003065374.1| hypothetical protein
CLIBASIA_04310 [Candidatus Liberibacter asiaticus str. psy62]
(200 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780961|ref|YP_003065374.1| hypothetical protein CLIBASIA_04310 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040638|gb|ACT57434.1| hypothetical protein CLIBASIA_04310 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 200
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK 60
MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK
Sbjct: 1 MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK 60
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV
Sbjct: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG
Sbjct: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
Query: 181 GVGYYSKFLHIDVGRVRSWT 200
GVGYYSKFLHIDVGRVRSWT
Sbjct: 181 GVGYYSKFLHIDVGRVRSWT 200
>gi|150397880|ref|YP_001328347.1| hypothetical protein Smed_2682 [Sinorhizobium medicae WSM419]
gi|150029395|gb|ABR61512.1| protein of unknown function DUF882 [Sinorhizobium medicae WSM419]
Length = 608
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 74/149 (49%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTLK+Y + T KA +TFKR +Y+Q+GL Q+NR L DW + MDP+L D +WE+
Sbjct: 53 QTRTLKLYFIHTKEKAQITFKRNGRYDQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEV 112
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q +YI+++S YR+ TN ML R++ +A+KSQH+LGKA+DFYIP V L+SL +I
Sbjct: 113 YQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDVRLKSLREIG 172
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++ + GGVGYY S F+H+DVG VR+W
Sbjct: 173 MKFQVGGVGYYPTSGSPFVHMDVGGVRAW 201
>gi|332716496|ref|YP_004443962.1| hypothetical protein AGROH133_12131 [Agrobacterium sp. H13-3]
gi|325063181|gb|ADY66871.1| hypothetical protein AGROH133_12131 [Agrobacterium sp. H13-3]
Length = 624
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/149 (48%), Positives = 106/149 (71%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + T KA++TFKR +Y+Q+GL +LNR L DW Q MDP+LFD +WE+
Sbjct: 54 ETRSLKLYYIHTREKAVITFKRNGKYDQKGLQELNRFLRDWRRNQPTRMDPRLFDLVWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++S +R+ ETN +L R + +A KSQH+LGKA+DFYIPGV L +L +I
Sbjct: 114 YRRSGATDYINVVSAFRSPETNGLLRTRTKGVAEKSQHMLGKAMDFYIPGVKLSTLREIG 173
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 174 MQMQIGGVGFYPTSGSPFVHMDVGGVRAW 202
>gi|159185889|ref|NP_356859.2| hypothetical protein Atu3763 [Agrobacterium tumefaciens str. C58]
gi|159141023|gb|AAK89644.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 587
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 106/149 (71%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + T KA++TFKR +Y+Q+GL +LNR L DW Q MDP+LFD +WE+
Sbjct: 18 ETRSLKLYYIHTREKAVITFKRNGKYDQKGLQELNRFLRDWRRNQPTRMDPRLFDLVWEV 77
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++S +R+ ETN +L R + +A KSQH+LGKA+DFYIPGV L +L +I
Sbjct: 78 YRRSGATDYINVVSAFRSPETNGLLRTRTKGVAEKSQHMLGKAMDFYIPGVKLATLREIG 137
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 138 MQMQIGGVGFYPTSGSPFVHMDVGGVRAW 166
>gi|307300416|ref|ZP_07580196.1| protein of unknown function DUF882 [Sinorhizobium meliloti BL225C]
gi|307318281|ref|ZP_07597716.1| protein of unknown function DUF882 [Sinorhizobium meliloti AK83]
gi|306895963|gb|EFN26714.1| protein of unknown function DUF882 [Sinorhizobium meliloti AK83]
gi|306904582|gb|EFN35166.1| protein of unknown function DUF882 [Sinorhizobium meliloti BL225C]
Length = 605
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 71/149 (47%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTLK+Y + T KA +T+KR +Y+Q+GL Q+NR L DW + MDP+L D +WE+
Sbjct: 53 QTRTLKLYFIHTKEKAQITYKRNGRYDQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEV 112
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q +YI+++S YR+ TN ML R++ +A+KSQH+LGKA+DFYIP V L++L ++
Sbjct: 113 YQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDVKLKTLREVG 172
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++ + GGVGYY S F+H+DVG VR+W
Sbjct: 173 MKFQVGGVGYYPTSGSPFVHMDVGGVRAW 201
>gi|227823367|ref|YP_002827339.1| hypothetical protein NGR_c28400 [Sinorhizobium fredii NGR234]
gi|227342368|gb|ACP26586.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 620
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 71/149 (47%), Positives = 104/149 (69%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTLK+Y + T KA +TFKR +Y+ +GL Q+NR L DW + MDP+L D +WE+
Sbjct: 53 QTRTLKLYFIHTKEKAQITFKRNGRYDSKGLQQINRFLRDWRRNEPTKMDPRLLDLIWEV 112
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q +YI+++S YR+ TN ML R++ +A+KSQH+LGKA+DFY+P V L++L +I
Sbjct: 113 YQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYLPDVRLKTLREIG 172
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++ + GGVGYY S F+H+DVG VR+W
Sbjct: 173 MKFQVGGVGYYPTSGSPFVHMDVGGVRAW 201
>gi|15966547|ref|NP_386900.1| hypothetical protein SMc04010 [Sinorhizobium meliloti 1021]
gi|15075818|emb|CAC47373.1| Hypothetical protein SMc04010 [Sinorhizobium meliloti 1021]
Length = 562
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 108/158 (68%), Gaps = 4/158 (2%)
Query: 46 MSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDP 105
M+ + + RTLK+Y + T KA +T+KR +Y+Q+GL Q+NR L DW + MDP
Sbjct: 1 MAPPVEAAGQTRTLKLYFIHTKEKAQITYKRNGRYDQKGLQQINRFLRDWRRNEPTKMDP 60
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L D +WE+ Q +YI+++S YR+ TN ML R++ +A+KSQH+LGKA+DFYIP V
Sbjct: 61 RLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDV 120
Query: 166 SLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
L++L ++ ++ + GGVGYY S F+H+DVG VR+W
Sbjct: 121 KLKTLREVGMKFQVGGVGYYPTSGSPFVHMDVGGVRAW 158
>gi|218463502|ref|ZP_03503593.1| hypothetical protein RetlK5_30543 [Rhizobium etli Kim 5]
Length = 613
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 20/180 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P S + D R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVSTP--------SQAAGD------TRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+RK
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPATNEMLRGRSRK 144
Query: 146 --IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRAIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
>gi|86358784|ref|YP_470676.1| hypothetical protein RHE_CH03184 [Rhizobium etli CFN 42]
gi|86282886|gb|ABC91949.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 454
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 6/155 (3%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L E R LK++ TG +A +T+KR +++ GL+Q+NR L DW + MDP+L D
Sbjct: 48 LASAEDRALKLFFTHTGERATITYKRDGKFDSRGLAQINRFLRDWRRNEPTRMDPRLLDL 107
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLR 168
+WE+ Q +YI+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L
Sbjct: 108 VWEVYQRSGGKDYIHVVSAYRSPATNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLA 167
Query: 169 SLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+L IA++++ GGVGYY S F+H+DVG VR+W
Sbjct: 168 TLRAIAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 202
>gi|222087064|ref|YP_002545599.1| hypothetical protein Arad_3804 [Agrobacterium radiobacter K84]
gi|221724512|gb|ACM27668.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 646
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 25/203 (12%)
Query: 4 TEIFR-ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIY 62
+EIFR + KV+ +GL + V++P++ SP S S E R+LKIY
Sbjct: 20 SEIFRKVAKVLAVGLL----ALAVSTPVFVGSP--------SKASG------ETRSLKIY 61
Query: 63 VVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE 122
V TG KA++T+KR +++ GL +LNR+L DW Q M+P LFD +W++ + E
Sbjct: 62 FVHTGEKAVITYKRDGKFDPAGLEKLNRILRDWRKNQPTKMNPHLFDLIWQVYRESGSHE 121
Query: 123 YIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
+I ++ G+R+ TN+ML R+ +A+KSQH+LG A+DFYIP V L L +I ++L+ G
Sbjct: 122 FINVVCGFRSPGTNEMLRTRSAHTGVAKKSQHMLGNAMDFYIPDVKLTKLREIGMKLQVG 181
Query: 181 GVGYY----SKFLHIDVGRVRSW 199
GVGYY S F+H+DVG VR+W
Sbjct: 182 GVGYYPTSGSPFVHMDVGGVRAW 204
>gi|327190399|gb|EGE57495.1| hypothetical protein RHECNPAF_430014 [Rhizobium etli CNPAF512]
Length = 468
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L E R LK++ TG KA +T+KR +++ +GL+Q+NR L DW + MDP+L D
Sbjct: 61 LASAEDRALKLFFTHTGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDL 120
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLR 168
+WE+ + +YI+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L
Sbjct: 121 VWEVYKRSGGKDYIHVVSAYRSPATNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLA 180
Query: 169 SLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+L IA++++ GGVGYY S F+H+DVG VR+W
Sbjct: 181 TLRAIAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 215
>gi|222149714|ref|YP_002550671.1| hypothetical protein Avi_3698 [Agrobacterium vitis S4]
gi|221736696|gb|ACM37659.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 497
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 4/150 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LKI V TG K +TFKR +Y+ +GL QLN ++ DW ++ MDP+LFD +W +
Sbjct: 18 ETRSLKILFVHTGEKQEITFKRNGRYDPKGLQQLNNIVRDWRRNEATKMDPRLFDLVWSV 77
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q YIY++SGYR+ TN ML R+ +A++SQH+ G A+DF+IPGV L+SL I
Sbjct: 78 YQKAGASGYIYVVSGYRSPATNAMLRSRSSGVAKESQHMNGTAMDFFIPGVPLKSLRDIG 137
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++ + GGVGYY S F+H+DV VRSW
Sbjct: 138 MKFQAGGVGYYPNSGSPFVHMDVAGVRSWP 167
>gi|116253804|ref|YP_769642.1| hypothetical protein RL4066 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258452|emb|CAK09555.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 615
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 20/180 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P S + D R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVGTP--------SQAAGD------TRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+RK
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNEMLRGRSRK 144
Query: 146 --IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRAIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
>gi|86359138|ref|YP_471030.1| hypothetical protein RHE_CH03547 [Rhizobium etli CFN 42]
gi|86283240|gb|ABC92303.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 613
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 71/151 (47%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 54 ETRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 114 YRQSGSRDYINVVCGFRSPATNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRA 173
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 174 IGMKMQIGGVGFYPKSGSPFVHMDVGGVRAW 204
>gi|327188782|gb|EGE55976.1| hypothetical protein RHECNPAF_77005 [Rhizobium etli CNPAF512]
Length = 612
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/151 (47%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 54 ETRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 114 YRQSGSRDYINVVCGFRSPATNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRG 173
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 174 IGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
>gi|190893374|ref|YP_001979916.1| hypothetical protein RHECIAT_CH0003800 [Rhizobium etli CIAT 652]
gi|190698653|gb|ACE92738.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 612
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/151 (47%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 54 ETRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 114 YRQSGSRDYINVVCGFRSPATNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRG 173
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 174 IGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
>gi|209550870|ref|YP_002282787.1| hypothetical protein Rleg2_3294 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536626|gb|ACI56561.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 597
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 38 DTRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 97
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 98 YRQSGSRDYINVVCGFRSPGTNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRG 157
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 158 IGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 188
>gi|218515849|ref|ZP_03512689.1| hypothetical protein Retl8_20271 [Rhizobium etli 8C-3]
Length = 317
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 54 ETRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 114 YRQSGSRDYINVVCGFRSPATNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRG 173
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 174 IGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
>gi|163758857|ref|ZP_02165944.1| hypothetical protein HPDFL43_15577 [Hoeflea phototrophica DFL-43]
gi|162284147|gb|EDQ34431.1| hypothetical protein HPDFL43_15577 [Hoeflea phototrophica DFL-43]
Length = 633
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/149 (47%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + T +A + FKR +Y+Q GL++LNR L DW + MDP+LFD +WE+
Sbjct: 89 ETRSLKLYYIHTKERAEIVFKRNGRYDQAGLNKLNRFLRDWRRNEPTKMDPRLFDLVWEV 148
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + +YI+++S YR+ TN ML R A KSQH+LGKA+DFYIPGV + L +I
Sbjct: 149 YRQANARDYIHVVSAYRSPATNAMLRRTRGGQATKSQHMLGKAIDFYIPGVKVSKLREIG 208
Query: 175 IRLKRGGVGYYSK----FLHIDVGRVRSW 199
++L+ GGVGYY K F+H+DV VR+W
Sbjct: 209 MKLQGGGVGYYPKSGSPFVHLDVAGVRAW 237
>gi|209550509|ref|YP_002282426.1| hypothetical protein Rleg2_2932 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536265|gb|ACI56200.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 452
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LK++ TG KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+
Sbjct: 47 EDRALKLFFTHTGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEV 106
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI+I+S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L
Sbjct: 107 YKRSGGKDYIHIVSAYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRA 166
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A++++ GGVGYY S F+H+DVG VR+W
Sbjct: 167 LAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 197
>gi|110635066|ref|YP_675274.1| hypothetical protein Meso_2732 [Mesorhizobium sp. BNC1]
gi|110286050|gb|ABG64109.1| protein of unknown function DUF882 [Chelativorans sp. BNC1]
Length = 635
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q E RTL++Y + T +A +TFKR +Y + GL Q+NR L DW + +MDP+L D +W
Sbjct: 50 QAETRTLRLYFIHTKERAEITFKRNGRYVKSGLDQINRFLRDWRRNEPANMDPRLLDLVW 109
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+ + +YI ++S YR+ +TN ML R+ +A KSQH+LGKA+DF+IP V L +L
Sbjct: 110 EVYRESGSRDYINVVSAYRSPQTNAMLRSRSSGVAEKSQHMLGKAMDFFIPDVKLSTLRA 169
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
IA+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 IALRKQMGGVGYYPRSGSPFVHLDVGGVRYW 200
>gi|218682462|ref|ZP_03530063.1| hypothetical protein RetlC8_26840 [Rhizobium etli CIAT 894]
Length = 460
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%), Gaps = 6/152 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 54 DTRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 114 YRQSGSKDYINVVCGFRSPGTNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRG 173
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSWT 200
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 174 IGMKMQVGGVGFYPKSGSPFVHMDVGGVRAWP 205
>gi|218672878|ref|ZP_03522547.1| hypothetical protein RetlG_15208 [Rhizobium etli GR56]
Length = 220
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 46 MSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDP 105
+ S L E R LK++ TG KA +T+KR +++ +GL+Q+NR L DW + MDP
Sbjct: 31 VGSASLASAEDRALKLFFTHTGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDP 90
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIP 163
+L D +WE+ + +YI+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+P
Sbjct: 91 RLLDLVWEVYKRSGGKDYIHVVSAYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVP 150
Query: 164 GVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
GV L +L IA++++ GGVGYY S F+H+DVG VR+W
Sbjct: 151 GVKLTTLRAIAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 190
>gi|116253370|ref|YP_769208.1| hypothetical protein RL3627 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258018|emb|CAK09116.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 456
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 11/191 (5%)
Query: 15 IGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
I + +S A FV I P L + + + S E R LK++ TG +A +T+
Sbjct: 19 IAMLLSCAERFVAKTIL---PAL--FALPALVGSASFASAEDRALKLFFTHTGERATITY 73
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+I+S YR+
Sbjct: 74 KRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPT 133
Query: 135 TNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L +A++++ GGVGYY S F
Sbjct: 134 TNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLSTLRALAMQMQVGGVGYYPTSGSPF 193
Query: 189 LHIDVGRVRSW 199
+H+DVG VR+W
Sbjct: 194 VHLDVGNVRAW 204
>gi|241206284|ref|YP_002977380.1| hypothetical protein Rleg_3595 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860174|gb|ACS57841.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 598
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R+LK+Y + TG KA++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+
Sbjct: 37 DTRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEV 96
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++ G+R+ TN++L R+R +A KSQH+LGKA+DF+IP V L +L
Sbjct: 97 YRQSGSRDYINVVCGFRSPGTNELLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRG 156
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 157 IGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 187
>gi|190893009|ref|YP_001979551.1| hypothetical protein RHECIAT_CH0003426 [Rhizobium etli CIAT 652]
gi|190698288|gb|ACE92373.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 451
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 104/151 (68%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LK++ TG KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+
Sbjct: 48 EDRALKLFFTHTGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEV 107
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L
Sbjct: 108 YKRSGGKDYIHVVSAYRSPATNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLSTLRA 167
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
A++++ GGVGYY S F+H+DVG VR+W
Sbjct: 168 SAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 198
>gi|241205885|ref|YP_002976981.1| hypothetical protein Rleg_3189 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859775|gb|ACS57442.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 458
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LK++ TG +A +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+
Sbjct: 54 EDRALKLFFTHTGERATITYKRDGKFDPKGLTQINRFLRDWRRNEPTRMDPRLLDLVWEV 113
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI+I+S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L
Sbjct: 114 YKRSGGKDYIHIVSAYRSPTTNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLSTLRA 173
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A++++ GGVGYY S F+H+DVG VR+W
Sbjct: 174 LAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 204
>gi|239834489|ref|ZP_04682817.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822552|gb|EEQ94121.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 687
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 73/151 (48%), Positives = 100/151 (66%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FKR +++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 75 ETRSLKLYYVHTGEKAEIVFKRNGRFDAQGLKKLNVFLRDWRRNEPTKMDPRLFDLIWQV 134
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRR--NRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++S YR+ TN ML R N +A+KSQH+LG+A+DFYIPGV L L
Sbjct: 135 YRSTGSSQYITVVSAYRSPATNAMLRSRSANTGVAKKSQHMLGRAMDFYIPGVPLAKLRG 194
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
I +R + GGVGYY S F+H+DVG VRSW
Sbjct: 195 IGMRYQIGGVGYYPRSGSPFVHMDVGNVRSW 225
>gi|153011573|ref|YP_001372787.1| hypothetical protein Oant_4258 [Ochrobactrum anthropi ATCC 49188]
gi|151563461|gb|ABS16958.1| protein of unknown function DUF882 [Ochrobactrum anthropi ATCC
49188]
Length = 636
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FKR +++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 24 ETRSLKLYYVHTGEKAEIVFKRNGRFDAQGLKKLNVFLRDWRRNEPTKMDPRLFDLVWQV 83
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI ++S YR+ TN ML R+ K +A+KSQH+LG+A+DFYIPGV L L
Sbjct: 84 YRSTGSSQYITVVSAYRSPATNAMLRSRSAKTGVAKKSQHMLGRAMDFYIPGVPLAKLRG 143
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
I +R + GGVGYY S F+H+DVG VRSW
Sbjct: 144 IGMRYQIGGVGYYPRSGSPFVHMDVGNVRSW 174
>gi|218661613|ref|ZP_03517543.1| hypothetical protein RetlI_20010 [Rhizobium etli IE4771]
Length = 209
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 105/151 (69%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LK++ TG KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+
Sbjct: 43 EDRALKLFFTHTGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEV 102
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L
Sbjct: 103 YKRSGGRDYIHVVSAYRSPATNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRA 162
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A++++ GGVGYY S F+H+DVG VR+W
Sbjct: 163 VAMQMQVGGVGYYPTSGSPFVHLDVGNVRAW 193
>gi|260460649|ref|ZP_05808900.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
gi|259033754|gb|EEW35014.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
Length = 647
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
EVR+LK+Y + T KA + +KR +Y EGL ++N +L DW + MDP+L D +WE
Sbjct: 42 EVRSLKLYHLHTHEKAEIVYKRNGRYIPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEA 101
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++ GYR+ TN ML R+R +A KSQH+LGKA+DFYIPGV L+ L I
Sbjct: 102 YRESGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIG 161
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++++ GGVGYY S F+H+DVG VR W
Sbjct: 162 LKMQGGGVGYYPSSGSPFVHMDVGNVRHW 190
>gi|298293067|ref|YP_003695006.1| hypothetical protein Snov_3112 [Starkeya novella DSM 506]
gi|296929578|gb|ADH90387.1| protein of unknown function DUF882 [Starkeya novella DSM 506]
Length = 549
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D + + RTL + V +G+ A VTFKR +Y+ L QLN L+ DW K+ +MDPQLF
Sbjct: 32 DAVANGDTRTLSFHHVHSGAAATVTFKRNGRYDPAALKQLNVLMQDWRRKEPTNMDPQLF 91
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D +WE+ + I I+ GYR+ TN ML R+R +A+ S H+ GKA+DFYIPGV L
Sbjct: 92 DIVWEVYRETGATAPIEIIGGYRSPATNAMLRSRSRGVAQTSLHMQGKAMDFYIPGVPLS 151
Query: 169 SLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+ + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 152 KIREAGLRLQRGGVGFYPTSGSPFVHLDTGGIRHW 186
>gi|222081765|ref|YP_002541130.1| hypothetical protein Arad_8202 [Agrobacterium radiobacter K84]
gi|221726444|gb|ACM29533.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 423
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LK++ TG KA + FKR +++ +GL+Q+NR L DW + +DP+L D +WE+
Sbjct: 30 EDRALKLFFTHTGEKATIVFKRDGKFDPKGLAQINRFLRDWRKNEPTRIDPELLDLVWEV 89
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ S E I+++S YR+ TN ML R+R +A+ SQH LGKA+DFYIPGV L +L
Sbjct: 90 YRRSSAREAIHVVSAYRSPSTNNMLRGRSRSSGVAKHSQHTLGKAMDFYIPGVKLATLRA 149
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 150 VAMQMQAGGVGFYPNSGSPFVHLDVGNVRAW 180
>gi|319781624|ref|YP_004141100.1| hypothetical protein Mesci_1897 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167512|gb|ADV11050.1| protein of unknown function DUF882 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 608
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + T KA + +KR +Y EGL ++N +L DW + MDP+L D +WE
Sbjct: 28 ETRSLKLYHLHTHEKAEIVYKRNGRYVPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEA 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++ GYR+ TN ML R+R +A KSQH+LGKA+DFYIPGV L+ L I
Sbjct: 88 YREAGATDYIQVVCGYRSPSTNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++++ GGVGYY S F+H+DVG VR W
Sbjct: 148 LKMQGGGVGYYPSSGSPFVHMDVGNVRHW 176
>gi|254472969|ref|ZP_05086367.1| hypothetical protein PJE062_2040 [Pseudovibrio sp. JE062]
gi|211957690|gb|EEA92892.1| hypothetical protein PJE062_2040 [Pseudovibrio sp. JE062]
Length = 563
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 96/148 (64%), Gaps = 4/148 (2%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
RTLK+Y T +A +TFKR +Y++EGL +LN L DW + MDP+LFD +WE+
Sbjct: 39 TRTLKLYFTHTKERAEITFKRNGRYDKEGLRKLNNFLRDWRQNEPTKMDPELFDLIWEVY 98
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
Q +YI+++S YR+ +TN ML +R+ +A+ SQH G+A+DF+IPGVS L + +
Sbjct: 99 QKAGTSKYIHVVSAYRSPKTNNMLRKRSSGVAKNSQHTRGRAMDFFIPGVSTAKLRALGL 158
Query: 176 RLKRGGVGYYSK----FLHIDVGRVRSW 199
R GGVGYY + F+H+D G VR W
Sbjct: 159 RQHVGGVGYYPRSNTPFVHMDTGSVRHW 186
>gi|307944486|ref|ZP_07659826.1| ATP/GTP-binding site motif A [Roseibium sp. TrichSKD4]
gi|307772235|gb|EFO31456.1| ATP/GTP-binding site motif A [Roseibium sp. TrichSKD4]
Length = 612
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 70/151 (46%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
+ E RTLK+Y T K VTFK+ +Y GL + NR L DW + +DP+L D +W
Sbjct: 24 EAETRTLKLYNTHTKEKVSVTFKKNGRYVSSGLREANRFLRDWRRNEITKIDPKLLDLVW 83
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+ + +YIY++S YR+ TN ML +R++ +A+KSQH LGKA+DFYIPGV+L L K
Sbjct: 84 EVYKEVGARDYIYVVSSYRSPATNNMLRKRSKGVAKKSQHTLGKAMDFYIPGVNLSKLRK 143
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+ + GGVGYY S F+H+D G VR W
Sbjct: 144 TGMLKQVGGVGYYPRSGSPFVHMDTGSVRHW 174
>gi|13472639|ref|NP_104206.1| hypothetical protein mll2999 [Mesorhizobium loti MAFF303099]
gi|14023385|dbj|BAB49992.1| mll2999 [Mesorhizobium loti MAFF303099]
Length = 622
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + T KA + +KR +Y EGL ++N +L DW + MDP+L D +WE
Sbjct: 18 ETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEA 77
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++ GYR+ TN ML R+R +A KSQH+LGKA+DFYIPGV L+ L I
Sbjct: 78 YRESGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIG 137
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++++ GGVGYY S F+H+DVG VR W
Sbjct: 138 LKMQGGGVGYYPTSGSPFVHMDVGNVRHW 166
>gi|225628563|ref|ZP_03786597.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261215592|ref|ZP_05929873.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|225616409|gb|EEH13457.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260917199|gb|EEX84060.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|326410271|gb|ADZ67335.1| ATP/GTP-binding site motif A (P-loop) [Brucella melitensis M28]
gi|326553564|gb|ADZ88203.1| ATP/GTP-binding site motif A (P-loop) [Brucella melitensis M5-90]
Length = 659
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|189022309|ref|YP_001932050.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
gi|237816605|ref|ZP_04595597.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus str. 2308
A]
gi|189020883|gb|ACD73604.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
gi|237787418|gb|EEP61634.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus str. 2308
A]
Length = 659
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|163844282|ref|YP_001621937.1| hypothetical protein BSUIS_B0088 [Brucella suis ATCC 23445]
gi|163675005|gb|ABY39115.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 637
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|161620172|ref|YP_001594058.1| angiomotin [Brucella canis ATCC 23365]
gi|161336983|gb|ABX63287.1| Angiomotin [Brucella canis ATCC 23365]
Length = 637
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|148557908|ref|YP_001257158.1| hypothetical protein BOV_A0078 [Brucella ovis ATCC 25840]
gi|148369193|gb|ABQ62065.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 659
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|23499850|ref|NP_699290.1| hypothetical protein BRA0083 [Brucella suis 1330]
gi|225685949|ref|YP_002733921.1| hypothetical protein BMEA_B0087 [Brucella melitensis ATCC 23457]
gi|254695231|ref|ZP_05157059.1| hypothetical protein Babob3T_11403 [Brucella abortus bv. 3 str.
Tulya]
gi|256112008|ref|ZP_05452953.1| hypothetical protein Bmelb3E_04980 [Brucella melitensis bv. 3 str.
Ether]
gi|265993454|ref|ZP_06106011.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|23463421|gb|AAN33295.1| conserved hypothetical protein [Brucella suis 1330]
gi|225642054|gb|ACO01967.1| protein of unknown function DUF882 [Brucella melitensis ATCC 23457]
gi|262764324|gb|EEZ10356.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 637
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|17988354|ref|NP_540987.1| hypothetical protein BMEII0010 [Brucella melitensis bv. 1 str. 16M]
gi|256043008|ref|ZP_05445954.1| hypothetical protein Bmelb1R_00920 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265989446|ref|ZP_06102003.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17984130|gb|AAL53251.1| hypothetical membrane associated protein [Brucella melitensis bv. 1
str. 16M]
gi|263000115|gb|EEZ12805.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 637
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|62317042|ref|YP_222895.1| hypothetical protein BruAb2_0083 [Brucella abortus bv. 1 str.
9-941]
gi|83269036|ref|YP_418327.1| ATP/GTP-binding motif-containing protein [Brucella melitensis
biovar Abortus 2308]
gi|62197235|gb|AAX75534.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939310|emb|CAJ12248.1| ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar
Abortus 2308]
Length = 637
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|304393279|ref|ZP_07375207.1| ATP/GTP-binding site motif A [Ahrensia sp. R2A130]
gi|303294286|gb|EFL88658.1| ATP/GTP-binding site motif A [Ahrensia sp. R2A130]
Length = 641
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/146 (47%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E RTLK+Y T A +TFK+ +Y GL Q NR L DW K+ MDP L D +WE+
Sbjct: 36 ETRTLKMYFTHTRESATITFKKNGKYIPSGLRQANRFLRDWRRKEPTKMDPALLDLVWEV 95
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q + I+++S YR+ TNKML RR R +A+ SQH GKA+DF IPGVS+ + +
Sbjct: 96 YQKSGGRKGIHVISAYRSPRTNKMLRRRGRNVAKTSQHTRGKAMDFAIPGVSVNKIRALG 155
Query: 175 IRLKRGGVGYY-SKFLHIDVGRVRSW 199
++ RGGVG+Y F+H+D GRVR W
Sbjct: 156 LKAHRGGVGFYRGAFVHLDTGRVRHW 181
>gi|254500787|ref|ZP_05112938.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436858|gb|EEE43537.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 575
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q E RTLK+Y T + +TFK+ +Y GL + NR L DW + +DP+L D +W
Sbjct: 14 QAETRTLKLYNTHTKERVSITFKKNGRYIPSGLREANRFLRDWRRNEITKIDPELLDLVW 73
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+ Q +YI+++S YR+ TN ML +R++ +AR SQH LGKA+DF+IPGV++R L +
Sbjct: 74 EVYQKVRAGDYIHVVSSYRSPATNNMLRKRSKGVARNSQHTLGKAMDFFIPGVNIRKLRE 133
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+D G VR W
Sbjct: 134 TGLRKQVGGVGYYPRSGSPFVHLDTGSVRHW 164
>gi|297250015|ref|ZP_06933716.1| ATP/GTP-binding site-containing protein A [Brucella abortus bv. 5
str. B3196]
gi|297173884|gb|EFH33248.1| ATP/GTP-binding site-containing protein A [Brucella abortus bv. 5
str. B3196]
Length = 283
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|265987040|ref|ZP_06099597.1| peptidase M15 [Brucella pinnipedialis M292/94/1]
gi|264659237|gb|EEZ29498.1| peptidase M15 [Brucella pinnipedialis M292/94/1]
Length = 302
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|294853111|ref|ZP_06793783.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|294818766|gb|EFG35766.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
Length = 285
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|260544278|ref|ZP_05820099.1| ATP/GTP-binding site-containing protein [Brucella abortus NCTC
8038]
gi|260097549|gb|EEW81423.1| ATP/GTP-binding site-containing protein [Brucella abortus NCTC
8038]
Length = 299
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|256158190|ref|ZP_05456099.1| ATP/GTP-binding motif-containing protein [Brucella ceti M490/95/1]
Length = 240
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|265996702|ref|ZP_06109259.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262550999|gb|EEZ07160.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 262
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|265998934|ref|ZP_06111491.1| ATP/GTP-binding site domain-containing protein A [Brucella
melitensis bv. 2 str. 63/9]
gi|263091313|gb|EEZ15849.1| ATP/GTP-binding site domain-containing protein A [Brucella
melitensis bv. 2 str. 63/9]
Length = 280
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|260759536|ref|ZP_05871884.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 4 str. 292]
gi|261753090|ref|ZP_05996799.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 3 str. 686]
gi|260669854|gb|EEX56794.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 4 str. 292]
gi|261742843|gb|EEY30769.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 3 str. 686]
Length = 258
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|265985716|ref|ZP_06098451.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264664308|gb|EEZ34569.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 288
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|261313803|ref|ZP_05953000.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261302829|gb|EEY06326.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 288
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|260568577|ref|ZP_05839046.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
40]
gi|260155242|gb|EEW90323.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
40]
Length = 290
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|260564241|ref|ZP_05834726.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
1 str. 16M]
gi|260151884|gb|EEW86977.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
1 str. 16M]
Length = 294
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|260757094|ref|ZP_05869442.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 6 str. 870]
gi|261219955|ref|ZP_05934236.1| LOW QUALITY PROTEIN: peptidase M15 [Brucella ceti B1/94]
gi|261756316|ref|ZP_06000025.1| LOW QUALITY PROTEIN: ATP/GTP-binding site domain-containing protein
A [Brucella sp. F5/99]
gi|260677202|gb|EEX64023.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 6 str. 870]
gi|260918539|gb|EEX85192.1| LOW QUALITY PROTEIN: peptidase M15 [Brucella ceti B1/94]
gi|261736300|gb|EEY24296.1| LOW QUALITY PROTEIN: ATP/GTP-binding site domain-containing protein
A [Brucella sp. F5/99]
Length = 260
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|260762781|ref|ZP_05875113.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 2 str. 86/8/59]
gi|261749848|ref|ZP_05993557.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 5 str. 513]
gi|260673202|gb|EEX60023.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 2 str. 86/8/59]
gi|261739601|gb|EEY27527.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 5 str. 513]
Length = 238
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|260882903|ref|ZP_05894517.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260872431|gb|EEX79500.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 272
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|254720667|ref|ZP_05182478.1| ATP/GTP-binding motif-containing protein [Brucella sp. 83/13]
Length = 266
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 28 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 88 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 147
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 148 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 176
>gi|256030017|ref|ZP_05443631.1| ATP/GTP-binding motif-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 263
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|261323641|ref|ZP_05962838.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299621|gb|EEY03118.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 285
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKCLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSAGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|254711354|ref|ZP_05173165.1| hypothetical protein BpinB_14075 [Brucella pinnipedialis B2/94]
gi|261318956|ref|ZP_05958153.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298179|gb|EEY01676.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 224
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|260467507|ref|ZP_05813675.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
gi|259028734|gb|EEW30042.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
Length = 499
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 99/150 (66%), Gaps = 4/150 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LKI + TG KA + FKR +Y+Q GL ++N +L DW + MDP+L D +W+
Sbjct: 19 ETRSLKIQHLHTGEKAEIVFKRNGRYDQAGLKKINVMLRDWRRNEPTRMDPRLLDLVWQA 78
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ YI+I+S YR+ TN ML R++ +AR+SQH++G+A+DF++P V L+ L I
Sbjct: 79 YRASGSTAYIHIVSAYRSPATNAMLRGRSKGVARESQHMVGRAMDFFLPDVPLKKLRDIG 138
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 139 LKMQGGGVGYYPTSGSPFIHMDVGNVRHWP 168
>gi|256252869|ref|ZP_05458405.1| hypothetical protein BcetB_00850 [Brucella ceti B1/94]
Length = 258
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|256256658|ref|ZP_05462194.1| hypothetical protein Babob9C_04715 [Brucella abortus bv. 9 str.
C68]
Length = 233
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|260166932|ref|ZP_05753743.1| hypothetical protein BruF5_00835 [Brucella sp. F5/99]
Length = 253
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254731773|ref|ZP_05190351.1| hypothetical protein Babob42_11415 [Brucella abortus bv. 4 str.
292]
Length = 253
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254706355|ref|ZP_05168183.1| hypothetical protein BpinM_05030 [Brucella pinnipedialis
M163/99/10]
Length = 249
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254698330|ref|ZP_05160158.1| hypothetical protein Babob28_11615 [Brucella abortus bv. 2 str.
86/8/59]
Length = 255
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254691473|ref|ZP_05154727.1| hypothetical protein Babob68_15275 [Brucella abortus bv. 6 str.
870]
gi|254699400|ref|ZP_05161228.1| hypothetical protein Bsuib55_00854 [Brucella suis bv. 5 str. 513]
Length = 250
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254702518|ref|ZP_05164346.1| hypothetical protein Bsuib36_00877 [Brucella suis bv. 3 str. 686]
Length = 237
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|261319592|ref|ZP_05958789.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261292282|gb|EEX95778.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 289
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLVKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|261216725|ref|ZP_05931006.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260921814|gb|EEX88382.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 294
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 50 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 109
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 110 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLVKLRAIG 169
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 170 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 198
>gi|256059669|ref|ZP_05449864.1| hypothetical protein Bneo5_04885 [Brucella neotomae 5K33]
Length = 246
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKCLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSAGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254715023|ref|ZP_05176834.1| hypothetical protein BcetM_00877 [Brucella ceti M13/05/1]
Length = 255
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLVKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|254711953|ref|ZP_05173764.1| hypothetical protein BcetM6_00867 [Brucella ceti M644/93/1]
Length = 250
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++
Sbjct: 11 ETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQV 70
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I
Sbjct: 71 YQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLVKLRAIG 130
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MRYQIGGVGYYPRSGSPFVHMDVGNVRHW 159
>gi|319782093|ref|YP_004141569.1| hypothetical protein Mesci_2372 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167981|gb|ADV11519.1| protein of unknown function DUF882 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 551
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 98/150 (65%), Gaps = 4/150 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LKI + TG KA + FKR +Y+ GL ++N +L DW + MDP+L D +W+
Sbjct: 64 ETRALKIQHLHTGEKAEIVFKRNGRYDPAGLKKINLMLRDWRRNEPTKMDPRLLDLVWQA 123
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ YI+++S YR+ TN ML R++ +AR+SQH++G+A+DF++P VSL+ L I
Sbjct: 124 YRASGSTAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVSLKKLRDIG 183
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 184 LKMQGGGVGYYPTSGSPFIHMDVGNVRHWP 213
>gi|86748552|ref|YP_485048.1| hypothetical protein RPB_1427 [Rhodopseudomonas palustris HaA2]
gi|86571580|gb|ABD06137.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 529
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + +G VTFKR +Y++E L +LN L DW S+ MD LFD LWE+
Sbjct: 43 DSRTLSFHHTHSGEDLTVTFKRNGRYDEEALGKLNHFLRDWRSQDKTAMDRSLFDILWEV 102
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH +G+A+DF+IPGV+L +
Sbjct: 103 YRDVDGKQPIQIISAYRSPATNAMLRRRSSGVARHSQHTMGQAMDFFIPGVALEKIRFAG 162
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D GRVR W
Sbjct: 163 LRLQRGGVGFYPTSGSPFVHLDTGRVRHW 191
>gi|13475429|ref|NP_106993.1| hypothetical protein mlr6494 [Mesorhizobium loti MAFF303099]
gi|14026181|dbj|BAB52779.1| mlr6494 [Mesorhizobium loti MAFF303099]
Length = 523
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LKI + TG KA + FKR +Y+Q GL +++ +L DW + MDP+L D +W+
Sbjct: 19 ETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWRRNEPTRMDPRLLDLVWQA 78
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ YI+++S YR+ TN ML R++ +AR+SQH++G+A+DF++P V L+ L I
Sbjct: 79 YRASGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVPLKKLRDIG 138
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
++++ GGVGYY S F+H+DVG VR W
Sbjct: 139 LKMQGGGVGYYPTSGSPFIHMDVGNVRHW 167
>gi|118588386|ref|ZP_01545795.1| hypothetical protein SIAM614_23932 [Stappia aggregata IAM 12614]
gi|118439092|gb|EAV45724.1| hypothetical protein SIAM614_23932 [Stappia aggregata IAM 12614]
Length = 609
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 4/151 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q E RTLK+Y T + +TFK+ +Y +GL + NR L DW + +DP+L D +W
Sbjct: 36 QAETRTLKLYNTHTKERVSITFKKNGRYLPDGLREANRFLRDWRRNEMTKIDPELLDLVW 95
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+ Q + I+++S YR+ TN ML +R+ +A+ SQH LGKA+D++IPGV L +L
Sbjct: 96 EVYQQVGASQPIHVVSSYRSPATNNMLRKRSSGVAKNSQHTLGKAMDYFIPGVKLATLRA 155
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+R + GGVGYY S F+H+D G VR W
Sbjct: 156 TGLRKEVGGVGYYPRSGSPFVHMDTGSVRHW 186
>gi|170749213|ref|YP_001755473.1| hypothetical protein Mrad2831_2806 [Methylobacterium radiotolerans
JCM 2831]
gi|170655735|gb|ACB24790.1| protein of unknown function DUF882 [Methylobacterium radiotolerans
JCM 2831]
Length = 499
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
++ + D + + R+L IY T A +TFKR +Y++ L QLN LL DW + M
Sbjct: 26 TAETEDAVANGDTRSLTIYHTHTQESATITFKRDGRYDRAALEQLNWLLRDWRVNEPTKM 85
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
DP+LFD +WE + + I+++S YR+ TN ML RR++ +A SQH+LGKA+DF++P
Sbjct: 86 DPRLFDTVWEAYRQVGATQPIHVVSAYRSPGTNAMLRRRSKMVAEYSQHMLGKAMDFFLP 145
Query: 164 GVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
VS+ + ++ +R++RGGVG+Y + F+H+DVG VR W
Sbjct: 146 DVSIDRIREVGLRMQRGGVGWYPHAGTPFVHLDVGSVRMW 185
>gi|170741336|ref|YP_001769991.1| hypothetical protein M446_3151 [Methylobacterium sp. 4-46]
gi|168195610|gb|ACA17557.1| protein of unknown function DUF882 [Methylobacterium sp. 4-46]
Length = 501
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+ D + + RT+ I+ T A VTFKR +Y++ L QLN LL DW Q MDP+
Sbjct: 49 TQDAVANGDTRTITIFHEHTKESATVTFKRDGRYDRAALEQLNWLLRDWRIDQPTRMDPR 108
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
LFD +WE + + I+++S YR+ +TN L RR+R +A SQH+LGKA+DFY+ VS
Sbjct: 109 LFDVVWEAHRATGSQDAIHVVSAYRSPQTNAALRRRSRAVAEHSQHMLGKAMDFYLSDVS 168
Query: 167 LRSLYKIAIRLKRGGVGY----YSKFLHIDVGRVRSW 199
+ + +I +R++RGGVG+ Y+ F+H+DVG VRSW
Sbjct: 169 VDQVREIGMRMQRGGVGWYPHAYNPFVHLDVGSVRSW 205
>gi|328542489|ref|YP_004302598.1| ATP/GTP-binding site-containing protein A [polymorphum gilvum
SL003B-26A1]
gi|326412236|gb|ADZ69299.1| ATP/GTP-binding site-containing protein A [Polymorphum gilvum
SL003B-26A1]
Length = 582
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 16/169 (9%)
Query: 35 PDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYD 94
PDL H E RTLK+Y T + +TFK+ +Y GL +NR L D
Sbjct: 13 PDLSAAH------------AETRTLKLYNTHTKERVEITFKKNGRYVPSGLRDINRFLRD 60
Query: 95 WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
W + +DPQL D +WE+ Q +YI+++S YR+ TN ML +R+R +A+ SQH
Sbjct: 61 WRRNEMTTIDPQLLDLVWEVYQEVGGRDYIHVVSSYRSPATNNMLRQRSRGVAQNSQHTR 120
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
GKA+DF+IPGV L +L +R + GGVG+Y S F+H+D G VR W
Sbjct: 121 GKAMDFFIPGVDLTTLRATGLRKQVGGVGFYPTSGSPFVHLDTGSVRHW 169
>gi|154246010|ref|YP_001416968.1| hypothetical protein Xaut_2067 [Xanthobacter autotrophicus Py2]
gi|154160095|gb|ABS67311.1| protein of unknown function DUF882 [Xanthobacter autotrophicus Py2]
Length = 502
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RT+ ++ +G TFK+ +Y+ E L+QLN L DW +++S MDP LFD +WE+
Sbjct: 51 DTRTITLHHTHSGESGSFTFKKNGRYDAEVLAQLNHFLRDWRNQKSTQMDPGLFDIVWEV 110
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ I I+S YR+ ETN ML R+ +A+ SQH+LG+A+DFYIPGV+L L
Sbjct: 111 YRETDATAPIQIVSSYRSPETNSMLRARSSGVAKFSQHMLGRAMDFYIPGVNLTDLRVAG 170
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G VR W
Sbjct: 171 LRLQRGGVGFYPTSGSPFVHMDTGNVRHW 199
>gi|188582119|ref|YP_001925564.1| hypothetical protein Mpop_2874 [Methylobacterium populi BJ001]
gi|179345617|gb|ACB81029.1| protein of unknown function DUF882 [Methylobacterium populi BJ001]
Length = 502
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 101/160 (63%), Gaps = 4/160 (2%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
++ + D + + RTL + TG VTFKR +Y++ L Q+N L+ DW +S+ M
Sbjct: 38 TAETQDAIANGDTRTLSMVHQHTGESLTVTFKRDGRYDRAALDQINWLMRDWRENESVKM 97
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
DP+LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF++
Sbjct: 98 DPRLFDVVWEAQRSVGSSAPLRIVCGYRSPKTNGMLRRRSSGVAETSQHMLGKAMDFFMT 157
Query: 164 GVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
S+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 158 DASIDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSW 197
>gi|299132063|ref|ZP_07025258.1| protein of unknown function DUF882 [Afipia sp. 1NLS2]
gi|298592200|gb|EFI52400.1| protein of unknown function DUF882 [Afipia sp. 1NLS2]
Length = 499
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 6/157 (3%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D + RTL + + VTFKR +Y+ + L +LN L DW S+ S MDP LF
Sbjct: 13 DATASNDTRTLSFHHTHSSEDLTVTFKRNGRYDADALKKLNHFLRDWRSQDSTTMDPHLF 72
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVS 166
D LWE+ + + I I+S YR+ +TN ML RR+ +AR SQH+LG A+DF+IPGV
Sbjct: 73 DILWEVTRDVDAKQPIQIISAYRSPKTNAMLRRRSAHSGVARFSQHMLGHAMDFFIPGVP 132
Query: 167 LRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
L + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 133 LEKIRFAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHW 169
>gi|39937249|ref|NP_949525.1| hypothetical protein RPA4189 [Rhodopseudomonas palustris CGA009]
gi|39651107|emb|CAE29630.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 553
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + +G VTFKR +Y+++ L QLN L DW S++ MD QLFD LWE+
Sbjct: 43 DSRTLSFHHTHSGESLTVTFKRSGRYDEDALKQLNHFLRDWRSQEQTVMDRQLFDILWEV 102
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH+ G A+DF+IPGV+L +
Sbjct: 103 YRDVDAKQPIQIISAYRSPATNAMLRRRSSGVARHSQHMQGHAMDFFIPGVALEQIRFAG 162
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G +R W
Sbjct: 163 LRLQRGGVGFYPTSGSPFVHLDTGGIRHW 191
>gi|91975885|ref|YP_568544.1| hypothetical protein RPD_1406 [Rhodopseudomonas palustris BisB5]
gi|91682341|gb|ABE38643.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
BisB5]
Length = 589
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + +G VTFKR +Y++E L +LN L DW S+ MD LFD LWE+
Sbjct: 98 DSRTLSFHHTHSGEDLTVTFKRNGRYDEEALGKLNHFLRDWRSQDKTVMDRTLFDILWEV 157
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH LG A+DF+IPGV+L +
Sbjct: 158 YRDVDGKQPIQIISAYRSPATNAMLRRRSSGVARHSQHTLGHAMDFHIPGVALEQIRFAG 217
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D GR+R W
Sbjct: 218 LRLQRGGVGFYPTSGSPFVHLDTGRIRHW 246
>gi|192293030|ref|YP_001993635.1| hypothetical protein Rpal_4669 [Rhodopseudomonas palustris TIE-1]
gi|192286779|gb|ACF03160.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
TIE-1]
Length = 540
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + +G VTFKR +Y+++ L QLN L DW S++ MD QLFD LWE+
Sbjct: 30 DSRTLSFHHTHSGESLTVTFKRSGRYDEDALKQLNHFLRDWRSQEQTVMDRQLFDILWEV 89
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH+ G A+DF+IPGV+L +
Sbjct: 90 YRDVDAKQPIQIISAYRSPATNAMLRRRSSGVARHSQHMQGHAMDFFIPGVALEQIRFAG 149
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G +R W
Sbjct: 150 LRLQRGGVGFYPTSGSPFVHLDTGGIRHW 178
>gi|158422064|ref|YP_001523356.1| hypothetical protein AZC_0440 [Azorhizobium caulinodans ORS 571]
gi|158328953|dbj|BAF86438.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 518
Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL TG TFK+ +Y+ E L QLN L DW + I+MDP LFD LWE+
Sbjct: 56 DTRTLTFTNPHTGEAGSFTFKKDGRYDPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEV 115
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ I +L GYR+ TN ML R++ +A SQH+ G+A+DFYIPGV L L +
Sbjct: 116 YREVGATAPITLLCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMDFYIPGVRLAELRETG 175
Query: 175 IRLKRGGVGYYS--KFLHIDVGRVRSW 199
+RL+RGGVG+Y F+H+D G VR W
Sbjct: 176 LRLQRGGVGFYPSQNFVHMDTGGVRMW 202
>gi|209884230|ref|YP_002288087.1| ATP/GTP-binding site motif A [Oligotropha carboxidovorans OM5]
gi|209872426|gb|ACI92222.1| ATP/GTP-binding site motif A [Oligotropha carboxidovorans OM5]
Length = 519
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 95/157 (60%), Gaps = 6/157 (3%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D + RTL + +G VTFKR +Y+ + L +LN L DW S+ S M+P LF
Sbjct: 18 DATASNDTRTLSFHHTHSGEDLTVTFKRNGRYDSDALKKLNHFLRDWRSQDSTTMNPHLF 77
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVS 166
D LWE+ + + I I+S YR+ +TN ML RR+ +AR SQH+LG A+DF+IPGV
Sbjct: 78 DILWEVYRDVDGKQPIQIISAYRSPKTNAMLRRRSAHSGVARFSQHMLGHAMDFFIPGVP 137
Query: 167 LRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
L + +RL+RGGVG+Y S F+H+D G VR W
Sbjct: 138 LEKIRFAGLRLQRGGVGFYPSSGSPFVHLDTGSVRHW 174
>gi|90425453|ref|YP_533823.1| hypothetical protein RPC_3978 [Rhodopseudomonas palustris BisB18]
gi|90107467|gb|ABD89504.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
BisB18]
Length = 541
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + + VTFKR +Y++ L ++N L DW S+ MD +LFD LWE+
Sbjct: 43 DTRTLSFHHTHSDENLTVTFKRNGRYDEAALREINHFLRDWRSQDQTTMDRRLFDILWEV 102
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH+LG+A+DFYIPGV+L +
Sbjct: 103 YRDVDAKQPIQIISAYRSPATNAMLRRRSSGVARASQHMLGQAMDFYIPGVALEQIRFAG 162
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G +R W
Sbjct: 163 LRLQRGGVGFYPTSGSPFVHLDTGNIRHW 191
>gi|254561916|ref|YP_003069011.1| hypothetical protein METDI3517 [Methylobacterium extorquens DM4]
gi|254269194|emb|CAX25160.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 496
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D + + R+L + TG VTFKR +Y++ L Q+N L+ DW +SI MDP+LF
Sbjct: 43 DAIANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWLMRDWRENESIKMDPRLF 102
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF++ S+
Sbjct: 103 DVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQHMLGKAMDFFMTDASID 162
Query: 169 SLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+ + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 163 QIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSW 197
>gi|240139502|ref|YP_002963977.1| hypothetical protein MexAM1_META1p2948 [Methylobacterium extorquens
AM1]
gi|240009474|gb|ACS40700.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 496
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D + + R+L + TG VTFKR +Y++ L Q+N L+ DW +SI MDP+LF
Sbjct: 43 DAIANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWLMRDWRENESIKMDPRLF 102
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF++ S+
Sbjct: 103 DVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQHMLGKAMDFFMTDASID 162
Query: 169 SLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+ + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 163 QIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSW 197
>gi|163852170|ref|YP_001640213.1| hypothetical protein Mext_2751 [Methylobacterium extorquens PA1]
gi|163663775|gb|ABY31142.1| protein of unknown function DUF882 [Methylobacterium extorquens
PA1]
Length = 496
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D + + R+L + TG VTFKR +Y++ L Q+N L+ DW +SI MDP+LF
Sbjct: 43 DAVANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWLMRDWRENESIKMDPRLF 102
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF++ S+
Sbjct: 103 DVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQHMLGKAMDFFMTDASID 162
Query: 169 SLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+ + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 163 QIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSW 197
>gi|115526101|ref|YP_783012.1| hypothetical protein RPE_4106 [Rhodopseudomonas palustris BisA53]
gi|115520048|gb|ABJ08032.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
BisA53]
Length = 539
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + + VTFKR +Y++E L ++N L DW S++ MD +LFD LWE+
Sbjct: 43 DSRTLTFHHTHSDENLTVTFKRNGRYDEEALGKINHFLRDWRSQEKTTMDRRLFDILWEV 102
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH LG A+DFYIPGV L +
Sbjct: 103 YRDVDGKQPIKIISAYRSPATNAMLRRRSSGVARFSQHTLGHAMDFYIPGVPLEQIRAAG 162
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G +R W
Sbjct: 163 LRLQRGGVGFYPTSGSPFVHLDTGNIRHW 191
>gi|218530928|ref|YP_002421744.1| hypothetical protein Mchl_2978 [Methylobacterium chloromethanicum
CM4]
gi|218523231|gb|ACK83816.1| protein of unknown function DUF882 [Methylobacterium
chloromethanicum CM4]
Length = 496
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+ D + + R+L + TG VTFKR +Y++ L Q+N L+ DW +SI MDP+
Sbjct: 41 TQDAVANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWLMRDWRENESIKMDPR 100
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF++ S
Sbjct: 101 LFDVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQHMLGKAMDFFMTDAS 160
Query: 167 LRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 161 IDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSW 197
>gi|220920263|ref|YP_002495564.1| hypothetical protein Mnod_0216 [Methylobacterium nodulans ORS 2060]
gi|219944869|gb|ACL55261.1| protein of unknown function DUF882 [Methylobacterium nodulans ORS
2060]
Length = 510
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+ D + RTL I T A VTFKR +Y++ L QLN LL DW + MDP+
Sbjct: 68 TQDAAANGDTRTLSIIHEHTKESATVTFKRDGRYDRAALEQLNWLLRDWRIDEPTKMDPR 127
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
LFD +WE + + ++I+S YR+ +TN L RR+R +A SQH+LGKA+DF++ VS
Sbjct: 128 LFDVVWEAHRASGSRDAVHIVSAYRSPQTNAALRRRSRAVAEHSQHMLGKAMDFFLTDVS 187
Query: 167 LRSLYKIAIRLKRGGVGY----YSKFLHIDVGRVRSW 199
+ + +I +R++RGGVG+ Y+ F+H+DVG VR+W
Sbjct: 188 VDQIREIGMRMQRGGVGWYPHAYNPFVHLDVGSVRAW 224
>gi|316935703|ref|YP_004110685.1| hypothetical protein Rpdx1_4401 [Rhodopseudomonas palustris DX-1]
gi|315603417|gb|ADU45952.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
DX-1]
Length = 535
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + + VTFKR +Y+++ L QLN L DW S++ MD +LFD LWE+
Sbjct: 30 DSRTLSFHHTHSRESLTVTFKRNGRYDEDALRQLNHFLRDWRSQEKTTMDRRLFDILWEV 89
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I+S YR+ TN ML RR+ +AR SQH LG A+DF+IPGV L +
Sbjct: 90 YRDVDAKQPIQIISAYRSPSTNAMLRRRSSGVARHSQHTLGHAMDFFIPGVPLEQIRFAG 149
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G VR W
Sbjct: 150 LRLQRGGVGFYPTSGSPFVHLDTGGVRHW 178
>gi|217978309|ref|YP_002362456.1| protein of unknown function DUF882 [Methylocella silvestris BL2]
gi|217503685|gb|ACK51094.1| protein of unknown function DUF882 [Methylocella silvestris BL2]
Length = 625
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL +Y TG TF+ Y+ L +LN L DW + MDP+LFD +WE+
Sbjct: 43 DTRTLNLYHSHTGESIQATFRVNGSYDPAVLEKLNYFLRDWRNNDRTRMDPRLFDTVWEV 102
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I I S YR+ ETN ML RR+ +A SQH+LGKA+D +PG+S+ + +I
Sbjct: 103 YRTAGATQPIVIFSAYRSPETNAMLRRRSSAVAEYSQHMLGKAMDTTMPGMSMEQIREIG 162
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
I+++RGGVG+YS+ F+H+DVG VRSW
Sbjct: 163 IKMQRGGVGFYSRENFVHLDVGGVRSW 189
>gi|75675183|ref|YP_317604.1| hypothetical protein Nwi_0990 [Nitrobacter winogradskyi Nb-255]
gi|74420053|gb|ABA04252.1| Protein of unknown function DUF882 [Nitrobacter winogradskyi
Nb-255]
Length = 529
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 90/152 (59%), Gaps = 6/152 (3%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E RTL + + VTFKR +Y++ L QLN L DW S++ MD LFD LWE
Sbjct: 42 NETRTLSFHHTHSSENLTVTFKRNGRYDEGALKQLNHFLRDWRSQEQTTMDRHLFDILWE 101
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRR--NRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
+ + + I I+S YR+ TN ML RR N +AR SQH LG A+DFYIPGV L +
Sbjct: 102 VYRDVDGRQPINIISAYRSPATNAMLRRRSKNSGVARFSQHTLGHAMDFYIPGVQLEKIR 161
Query: 172 KIAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
+RL+RGGVG+Y K F+H+D G VR W
Sbjct: 162 FAGLRLQRGGVGFYPKSGSPFVHLDTGHVRHW 193
>gi|92116781|ref|YP_576510.1| hypothetical protein Nham_1222 [Nitrobacter hamburgensis X14]
gi|91799675|gb|ABE62050.1| protein of unknown function DUF882 [Nitrobacter hamburgensis X14]
Length = 526
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 93/157 (59%), Gaps = 6/157 (3%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D E RTL + + VTFKR +Y++ L QLN L DW S++ MD LF
Sbjct: 37 DAAALNETRTLSFHHTHSSEDLTVTFKRNGRYDEAALKQLNHFLRDWRSQEQTTMDRHLF 96
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK--IARKSQHVLGKAVDFYIPGVS 166
D LWE+ + + I I+S YR+ TN ML RR++ +AR SQH+LG A+DF+IPGV
Sbjct: 97 DILWEVYRDVDARQPINIVSAYRSPATNAMLRRRSKHTGVARFSQHMLGHAMDFFIPGVP 156
Query: 167 LRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
L + +RL+RGGVG+Y K F+H+D G VR W
Sbjct: 157 LEKIRFAGLRLQRGGVGFYPKSGSPFVHLDTGHVRHW 193
>gi|27382243|ref|NP_773772.1| hypothetical protein blr7132 [Bradyrhizobium japonicum USDA 110]
gi|27355414|dbj|BAC52397.1| blr7132 [Bradyrhizobium japonicum USDA 110]
Length = 538
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E +TL + +G VTFKR +Y+ L QLN L DW ++ MD LFD LWE
Sbjct: 50 NETKTLSFHHTHSGEDLTVTFKRDGRYDDASLKQLNHFLRDWRTQDETVMDRHLFDILWE 109
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ + + I I+S YR+ TN ML RR+ +AR SQH+LG A+DFYIPGV L +
Sbjct: 110 VYRDVDGKQPIQIISSYRSPATNAMLRRRSSGVARFSQHMLGHAMDFYIPGVPLEQIRFA 169
Query: 174 AIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G +R W
Sbjct: 170 GLRLQRGGVGFYPTSGSPFVHLDTGSIRHW 199
>gi|296448822|ref|ZP_06890665.1| protein of unknown function DUF882 [Methylosinus trichosporium
OB3b]
gi|296253674|gb|EFH00858.1| protein of unknown function DUF882 [Methylosinus trichosporium
OB3b]
Length = 301
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S + + E RTL +Y T + T+ +Y++ L QLN L DW + MD
Sbjct: 33 SFTESAVANGETRTLYLYHAHTHEQIAATYLVNGRYDESVLEQLNWFLRDWRRDEPTKMD 92
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+LFD +W+ + E ++++S YR+ ETN ML R+R +AR SQH+LGKA+D +PG
Sbjct: 93 PRLFDVVWQAYRDAGANEPVHVVSAYRSPETNAMLRSRSRAVARHSQHMLGKAMDTTMPG 152
Query: 165 VSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+S+ ++ +I +R++RGGVGYY + F+H+DVG VRSW
Sbjct: 153 MSMSTIREIGMRMQRGGVGYYPNAGTPFVHLDVGSVRSW 191
>gi|85716084|ref|ZP_01047060.1| hypothetical protein NB311A_10910 [Nitrobacter sp. Nb-311A]
gi|85697083|gb|EAQ34965.1| hypothetical protein NB311A_10910 [Nitrobacter sp. Nb-311A]
Length = 536
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 6 IFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+FR+ + G + S ++ Y + + + D E RTL +
Sbjct: 3 VFRVGSYVLAGFARGLKSLSISRTGYRIGLSSLLLLAGAGSVHDAAALNETRTLSFHHTH 62
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
+ VTFKR +Y++ L QLN L DW S++ MD LFD LWE+ + + I
Sbjct: 63 SKENLTVTFKRDGRYDEGALKQLNHFLRDWRSQEQTTMDRHLFDILWEVYRDVGARQPIN 122
Query: 126 ILSGYRTQETNKMLSRR--NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
I+S YR+ TN +L RR N +AR SQH+LG A+DF+IPGV L + +RL+RGGVG
Sbjct: 123 IISAYRSPATNALLRRRSKNSGVARFSQHMLGHAMDFFIPGVQLEKIRFAGLRLQRGGVG 182
Query: 184 YYSK----FLHIDVGRVRSW 199
+Y K F+H+D G VR W
Sbjct: 183 FYPKSGSPFVHLDTGHVRHW 202
>gi|90418905|ref|ZP_01226816.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336985|gb|EAS50690.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 593
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
+ E R LK Y + T KA ++K +YN L +LN + DW + ++MDP+L D +W
Sbjct: 63 KAETRVLKFYNLHTHEKASFSYKSNGRYNGSELKKLNWFMRDWRKSKQVEMDPRLLDLIW 122
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E + YI ++ GYR+ TN ML R+ +A++SQH LGKA+DFYIP V L L +
Sbjct: 123 EAYRQSGSSAYINVICGYRSPATNSMLRSRSSGVAKQSQHTLGKALDFYIPDVPLAKLRE 182
Query: 173 IAIRLKRGGVGYYSK----FLHIDVGRVRSW 199
I ++++ GGVGYY K F+H DVG R W
Sbjct: 183 IGLKMQVGGVGYYPKSGSPFVHFDVGNARHW 213
>gi|146338285|ref|YP_001203333.1| hypothetical protein BRADO1189 [Bradyrhizobium sp. ORS278]
gi|146191091|emb|CAL75096.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 516
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 6/151 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL + +G VTFKR +Y+++ L +LN L DW ++ MD +LFD LWE+
Sbjct: 14 DTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDETVMDRRLFDILWEV 73
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ + I I+S YR+ TN ML RR+ +AR SQH+LG A+DFYIPGV L +
Sbjct: 74 YRDVDGKQPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMDFYIPGVPLEQIRY 133
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+RL+RGGVG+Y S F+H+D G +R W
Sbjct: 134 AGLRLQRGGVGFYPTSGSPFVHLDTGNIRHW 164
>gi|148258073|ref|YP_001242658.1| hypothetical protein BBta_6865 [Bradyrhizobium sp. BTAi1]
gi|146410246|gb|ABQ38752.1| hypothetical protein BBta_6865 [Bradyrhizobium sp. BTAi1]
Length = 544
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 6/157 (3%)
Query: 49 DLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
D E RTL + +G VTFKR +Y+++ L +LN L DW ++ MD +LF
Sbjct: 39 DAAALNETRTLSFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDETVMDRRLF 98
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVS 166
D LWE+ + + I I+S YR+ TN ML RR+ +AR SQH+LG A+DFYIP V
Sbjct: 99 DILWEVYRDVDAKQPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMDFYIPNVP 158
Query: 167 LRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
L + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 159 LEQIRFAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHW 195
>gi|182680348|ref|YP_001834494.1| hypothetical protein Bind_3448 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636231|gb|ACB97005.1| protein of unknown function DUF882 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 659
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RT+ +Y TG TF+ Y+ L +LN L D+ + +MDP+LFD +WE
Sbjct: 44 DTRTISLYHSHTGESIEATFRVNGHYDPSVLHKLNWFLRDFRRDEQTNMDPRLFDVIWEA 103
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I + S YR+ ETN ML RR+R +A SQH+LGKA+D +PG+ + + +I
Sbjct: 104 YRAAGANQPIVVYSAYRSPETNAMLRRRSRAVAEFSQHMLGKAMDTTMPGMPMERIREIG 163
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+R++RGGVGYY S F+H+DVG VRSW
Sbjct: 164 MRMQRGGVGYYPSSNFVHLDVGHVRSW 190
>gi|114706843|ref|ZP_01439743.1| ATP/GTP-binding site motif A (P-loop) [Fulvimarina pelagi HTCC2506]
gi|114537791|gb|EAU40915.1| ATP/GTP-binding site motif A (P-loop) [Fulvimarina pelagi HTCC2506]
Length = 509
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E RTLK Y + T + +KR +Y Q + ++N L DW ++ MDPQL D LWE
Sbjct: 28 ETRTLKFYNLHTKERGSFAYKRNGRYVQSEVKKINWFLRDWRQGKATTMDPQLLDLLWEA 87
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++S YR+ TN ML R A+KSQH++G+A+DF+IPGV L +L I
Sbjct: 88 YRQAGARDYINVVSAYRSPATNGMLRRTRGGQAKKSQHMVGRALDFFIPGVKLSTLRAIG 147
Query: 175 IRLKRGGVGYYSK----FLHIDVGRVRSW 199
++++ GGVGYY K F+H D G R W
Sbjct: 148 LKMQVGGVGYYPKSGSPFVHFDTGNARHW 176
>gi|323139812|ref|ZP_08074846.1| protein of unknown function DUF882 [Methylocystis sp. ATCC 49242]
gi|322394948|gb|EFX97515.1| protein of unknown function DUF882 [Methylocystis sp. ATCC 49242]
Length = 599
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 5/160 (3%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S++ + + RT+ ++ TG T+ QY+ L QLN L DW + +MD
Sbjct: 29 SLTETAIANGDTRTIYLHHAHTGEDIAATYLVNGQYDSNVLRQLNWFLRDWRRDEPTNMD 88
Query: 105 PQLFDFLWEI-QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
P+LFD +WE + + + I ++S YR+ ETN ML R+R +A+ SQH+LGKA+D +P
Sbjct: 89 PRLFDVVWEAYRTAGAGNQVINVVSAYRSPETNAMLRSRSRAVAKYSQHMLGKAMDTTMP 148
Query: 164 GVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
G+ + + +I +R++RGGVGYY + F+H+DVG VRSW
Sbjct: 149 GMPMSHIREIGMRMQRGGVGYYPTAGTPFVHLDVGNVRSW 188
>gi|218677356|ref|ZP_03525253.1| hypothetical protein RetlC8_00295 [Rhizobium etli CIAT 894]
Length = 160
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
+ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+I+S YR+ TN ML
Sbjct: 1 DPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPATNNMLR 60
Query: 141 RRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVG 194
R+R +A+KSQH+LGKA+DFY+PGV L +L A++++ GGVGYY S F+H+DVG
Sbjct: 61 NRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRATAMQMQVGGVGYYPTSGSPFVHLDVG 120
Query: 195 RVRSW 199
VR+W
Sbjct: 121 NVRAW 125
>gi|218514618|ref|ZP_03511458.1| hypothetical protein Retl8_13432 [Rhizobium etli 8C-3]
Length = 184
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R LK++ TG KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+
Sbjct: 40 EDRALKLFFTHTGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEV 99
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +YI+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L
Sbjct: 100 YKRSGGKDYIHVVSAYRSPATNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLSTLRA 159
Query: 173 IAIRLK 178
IA++++
Sbjct: 160 IAMQMQ 165
>gi|238897531|ref|YP_002923210.1| hypothetical protein HDEF_0299 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465288|gb|ACQ67062.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 185
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
+ + R L+I TG F G +YN++GLS+LN + D+ + + +D QLF+ L+
Sbjct: 33 RPKPRILEINHTPTGEFIKTEFFDGRKYNKKGLSRLNYIFRDFRANKLKSIDSQLFNQLY 92
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+Q + I ++SGYRT++TN +L + + +A S H LG+AVDFYI G+ L +YK
Sbjct: 93 RLQNLLGTNKPIQLISGYRTKKTNNLLRKSSSAVAINSFHTLGRAVDFYIEGIPLNKIYK 152
Query: 173 IAIRLKRGGVGYYSK--FLHIDVGRVRSWT 200
A+R++ GGVGYY K F+HID G VR+W+
Sbjct: 153 AALRMRAGGVGYYPKSHFIHIDTGPVRNWS 182
>gi|251789272|ref|YP_003003993.1| hypothetical protein Dd1591_1661 [Dickeya zeae Ech1591]
gi|247537893|gb|ACT06514.1| protein of unknown function DUF882 [Dickeya zeae Ech1591]
Length = 182
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + V F G +YN+E LS+LN D+ + + +DP LFD
Sbjct: 32 LSTARPRILTLNNLNTGERIKVEFFDGRRYNKEELSRLNHFFRDYRANKVKTIDPSLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN+ L ++ +A++S H LGKA+DF+I GV L ++
Sbjct: 92 LYRLQVMLGTTKPVQLISGYRSYSTNEDLRSHSKGVAKQSYHTLGKAMDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G +R+W
Sbjct: 152 RKAAVKMRAGGVGYYPQSNFVHIDTGAIRTW 182
>gi|119945330|ref|YP_943010.1| hypothetical protein Ping_1614 [Psychromonas ingrahamii 37]
gi|119863934|gb|ABM03411.1| hypothetical protein DUF882 [Psychromonas ingrahamii 37]
Length = 183
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
+ R L + + TG + + + G Y + + ++N D+ ++I+MD +LFD L
Sbjct: 34 KNNPRELNLNNLHTGEELLTEYFDGKHYQRSEMKKINHFCRDFRRNETINMDKRLFDHLM 93
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
IQ+ + ++SGYR+ TNKMLS ++ +A+KS H+LG+A+DF + GV L + K
Sbjct: 94 AIQKTIGSNSQVQLISGYRSPATNKMLSAQSGGVAKKSLHMLGRAIDFRLEGVPLIEVKK 153
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 154 AALSLKVGGVGYYPKSNFVHIDTGNVRSW 182
>gi|312112857|ref|YP_004010453.1| hypothetical protein Rvan_0064 [Rhodomicrobium vannielii ATCC
17100]
gi|311217986|gb|ADP69354.1| protein of unknown function DUF882 [Rhodomicrobium vannielii ATCC
17100]
Length = 409
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 4/150 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E RT+ +Y + T K +TFK+ +Y E L +LN + DW +I +DP L D +WE+
Sbjct: 35 EERTISMYNIHTKDKISITFKKDGRYIPEALEKLNYFMRDWRRNMTIRIDPGLIDLMWEL 94
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
E I+++ GYR+ TN++L + AR S+H+ G+A D P V L+ L A
Sbjct: 95 HNELGSKEPIHLICGYRSGGTNELLRQTRGGQARNSRHITGQAADLMFPDVPLKQLRYSA 154
Query: 175 IRLKRGGVGYYSK----FLHIDVGRVRSWT 200
+ +RGGVGYY + F+H+D G VR W
Sbjct: 155 LVRERGGVGYYPESGLPFVHVDTGNVRHWP 184
>gi|197335748|ref|YP_002155959.1| twin-arginine translocation pathway signal [Vibrio fischeri MJ11]
gi|197317238|gb|ACH66685.1| twin-arginine translocation pathway signal [Vibrio fischeri MJ11]
Length = 183
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R L + + TG + + G QY L +LN L D+ +SI+MD +LFD L
Sbjct: 35 ETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHLCRDFRRNESIEMDKRLFDQLSA 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
IQ + I+SGYR+ TN+ML + + +A+KS H+LGKA+DF + GV L + K
Sbjct: 95 IQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEIRK 154
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID GRVR W
Sbjct: 155 AALSLKAGGVGYYPGSNFVHIDTGRVRFW 183
>gi|238749752|ref|ZP_04611257.1| hypothetical protein yrohd0001_30720 [Yersinia rohdei ATCC 43380]
gi|238712407|gb|EEQ04620.1| hypothetical protein yrohd0001_30720 [Yersinia rohdei ATCC 43380]
Length = 182
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRGYNKDELSRLNHLFRDYRANKVKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + + +LSGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGFLGTTKPVQLLSGYRSIDTNNELRGRSRGVAKHSYHTKGQAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPVRTW 182
>gi|59711765|ref|YP_204541.1| hypothetical protein VF_1158 [Vibrio fischeri ES114]
gi|59479866|gb|AAW85653.1| conserved protein [Vibrio fischeri ES114]
Length = 183
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R L + + TG + + G QY L +LN L D+ +SI+MD +LFD L
Sbjct: 35 ETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHLCRDFRRNESIEMDKRLFDQLSA 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
IQ + I+SGYR+ TN+ML + + +A+KS H+LGKA+DF + GV L + K
Sbjct: 95 IQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEVRK 154
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID GRVR W
Sbjct: 155 AALSLKAGGVGYYPGSNFVHIDTGRVRFW 183
>gi|89092900|ref|ZP_01165852.1| hypothetical protein MED92_10579 [Oceanospirillum sp. MED92]
gi|89082925|gb|EAR62145.1| hypothetical protein MED92_10579 [Oceanospirillum sp. MED92]
Length = 188
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ + + R+L + + TG TF G +Y + L+ LN +L D + Q+++MD QL
Sbjct: 36 IHKPQERSLSLLNLHTGESINSTFLAGGEYQYDSLADLNHVLRDHRTDQAMNMDKQLLLL 95
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L E+QQ F I+++S YR+ +TN MLS++N K+A+KS H+ G+A+D IPGV L+ L
Sbjct: 96 LNELQQTFGEHNPIHVISAYRSPKTNAMLSQKNSKVAKKSYHMKGQAIDIRIPGVELKDL 155
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+K ++ LK GGVG Y S F+H+DVGRVR W
Sbjct: 156 HKASLDLKAGGVGLYTRSNFIHLDVGRVRRW 186
>gi|238795868|ref|ZP_04639381.1| hypothetical protein ymoll0001_25400 [Yersinia mollaretii ATCC
43969]
gi|238720331|gb|EEQ12134.1| hypothetical protein ymoll0001_25400 [Yersinia mollaretii ATCC
43969]
Length = 182
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G +YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESLKAEFFDGRRYNKDELSRLNHLFRDYRANKVKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + I ++SGYR+ +TN L R+R +A+ S H GKA+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTTKPIQLISGYRSLDTNNELRERSRGVAKHSFHTQGKAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|238753520|ref|ZP_04614883.1| hypothetical protein yruck0001_20500 [Yersinia ruckeri ATCC 29473]
gi|238708473|gb|EEQ00828.1| hypothetical protein yruck0001_20500 [Yersinia ruckeri ATCC 29473]
Length = 182
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G YN+E L++LN + D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGKGYNKEELTRLNHIFRDYRANKVKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN + R+ +A+ S H LGKA+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLNTNNEMRERSSGVAKHSYHTLGKAMDFHIEGIQLNNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S FLHID G VR+W
Sbjct: 152 RKAALKMRAGGVGYYVRSNFLHIDTGPVRAW 182
>gi|292487844|ref|YP_003530719.1| hypothetical protein EAMY_1361 [Erwinia amylovora CFBP1430]
gi|292899071|ref|YP_003538440.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291198919|emb|CBJ46029.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291553266|emb|CBA20311.1| Uncharacterized protein ycbK [Erwinia amylovora CFBP1430]
gi|312171966|emb|CBX80223.1| Uncharacterized protein ycbK [Erwinia amylovora ATCC BAA-2158]
Length = 182
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y++ L++LN D+ + +S +DP LFD
Sbjct: 32 LSTARPRMLTLNNLHTGESLKTEFFNGKTYDKSELTRLNHFFRDYRANKSKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + + ++SGYR+ TN ML R+ +A+ S H LG+A+DF+I G+SL ++
Sbjct: 92 LFRLQTLLNTRKPVQLISGYRSLATNNMLRERSDGVAKHSYHTLGQAMDFHIEGISLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPVRRW 182
>gi|238757636|ref|ZP_04618820.1| hypothetical protein yaldo0001_19570 [Yersinia aldovae ATCC 35236]
gi|238704141|gb|EEP96674.1| hypothetical protein yaldo0001_19570 [Yersinia aldovae ATCC 35236]
Length = 196
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN+E LS+LN L D+ + + +DP+LFD
Sbjct: 46 LSTPRPRILTLNNLNTGESIKAEFFDGHGYNKEELSRLNHLFRDYRANKVKSIDPRLFDQ 105
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R R +A+ S H G+A+DF+I G+ L ++
Sbjct: 106 LYRLQGLLGTTKPVQLISGYRSLDTNNELRERGRGVAKHSFHTQGRAMDFHIEGIQLSNI 165
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 166 RKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 196
>gi|238785819|ref|ZP_04629789.1| hypothetical protein yberc0001_25510 [Yersinia bercovieri ATCC
43970]
gi|238713272|gb|EEQ05314.1| hypothetical protein yberc0001_25510 [Yersinia bercovieri ATCC
43970]
Length = 182
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNHLFRDYRANKVKTIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H GKA+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHSFHTQGKAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|318606243|emb|CBY27741.1| exported protein [Yersinia enterocolitica subsp. palearctica Y11]
Length = 182
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNHLFRDYRANKVKTIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHSFHTQGRAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G RSW
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRSW 182
>gi|123441869|ref|YP_001005852.1| hypothetical protein YE1558 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332162189|ref|YP_004298766.1| hypothetical protein YE105_C2567 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122088830|emb|CAL11636.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|325666419|gb|ADZ43063.1| hypothetical protein YE105_C2567 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860171|emb|CBX70492.1| uncharacterized protein ycbK [Yersinia enterocolitica W22703]
Length = 182
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNHLFRDYRANKVKTIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHSFHTQGRAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G RSW
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRSW 182
>gi|167624265|ref|YP_001674559.1| hypothetical protein Shal_2341 [Shewanella halifaxensis HAW-EB4]
gi|167354287|gb|ABZ76900.1| protein of unknown function DUF882 [Shewanella halifaxensis
HAW-EB4]
Length = 182
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+L Y TG + ++ Y E L+ +++L D ++ MD +LFDF ++++
Sbjct: 37 VRSLGFYNRHTGERGQGSYWIDGDYQSEILTDFSQVLRDHRQNEAAPMDKRLFDFAYQLR 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
Q S + ++I+SGYR+ +TN ML++R+ +A+KS H+ G A+D +PGV L + + AI
Sbjct: 97 QSLSFEDELHIISGYRSPKTNAMLAKRSNGVAKKSYHMKGMALDLALPGVKLADIREAAI 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+HID G VR W
Sbjct: 157 ELKLGGVGYYPSSGFVHIDTGPVRHW 182
>gi|149191673|ref|ZP_01869916.1| hypothetical protein VSAK1_04605 [Vibrio shilonii AK1]
gi|148834514|gb|EDL51508.1| hypothetical protein VSAK1_04605 [Vibrio shilonii AK1]
Length = 181
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
RTL + + TG + G++Y Q L++LN L D ++ MD +LFD + EIQ
Sbjct: 37 RTLAMNNLHTGESLESRYFDGAKYIQAELARLNTLCRDHRRNETHSMDKRLFDQISEIQS 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
V + I+SGYR+ ETN L + +A+KS H+LG+A+DF + GV L L++ A+
Sbjct: 97 LLGVKSEVLIISGYRSPETNASLRSGSNGVAKKSLHMLGQAIDFRLDGVKLSHLHEAALT 156
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+K GGVGYY S+F+HID G VR+W
Sbjct: 157 IKAGGVGYYPRSQFVHIDTGPVRNW 181
>gi|238789299|ref|ZP_04633086.1| hypothetical protein yfred0001_41080 [Yersinia frederiksenii ATCC
33641]
gi|238722631|gb|EEQ14284.1| hypothetical protein yfred0001_41080 [Yersinia frederiksenii ATCC
33641]
Length = 182
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNHLFRDYRANKVKTIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + I ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTTKPIQLISGYRSLDTNNELRERSRGVAKHSFHTQGRAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|238763356|ref|ZP_04624320.1| hypothetical protein ykris0001_3120 [Yersinia kristensenii ATCC
33638]
gi|238698455|gb|EEP91208.1| hypothetical protein ykris0001_3120 [Yersinia kristensenii ATCC
33638]
Length = 182
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHLFRDYRANKVKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTTKPVQLISGYRSLDTNNELRERGRGVAKHSYHTKGQAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|259908906|ref|YP_002649262.1| hypothetical protein EpC_22590 [Erwinia pyrifoliae Ep1/96]
gi|224964528|emb|CAX56038.1| Putative exported protein [Erwinia pyrifoliae Ep1/96]
gi|283478901|emb|CAY74817.1| Uncharacterized protein ycbK [Erwinia pyrifoliae DSM 12163]
Length = 182
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y++ L++LN D+ + +S +DP LFD
Sbjct: 32 LSTARPRVLTLNNLHTGESLKTEFFNGKTYDKSELTRLNHFFRDYRANKSKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + + ++SGYR+ TN ML R+ +AR S H G+A+DF+I G+SL ++
Sbjct: 92 LFRLQTLLNTRKPVQLISGYRSLATNNMLRERSDGVARHSYHTKGQAMDFHIEGISLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPVRRW 182
>gi|157961781|ref|YP_001501815.1| hypothetical protein Spea_1958 [Shewanella pealeana ATCC 700345]
gi|157846781|gb|ABV87280.1| protein of unknown function DUF882 [Shewanella pealeana ATCC
700345]
Length = 182
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+L Y TG + ++ Y E L+ +++L D ++ MD +LFDF ++++
Sbjct: 37 VRSLGFYNRHTGERGQGSYWVDGDYQSEILTDFSQVLRDHRQNEAAPMDKRLFDFAYQLR 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ S E ++++SGYR+ +TN ML+ R+ +A+KS H+ G A+D +PGV L + + A+
Sbjct: 97 ESLSFKEDLHVISGYRSPKTNAMLANRSNGVAKKSYHMKGMALDLALPGVKLAHIREAAL 156
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY K F+HID G VRSW
Sbjct: 157 ELKLGGVGYYPKSGFIHIDTGPVRSW 182
>gi|253990245|ref|YP_003041601.1| hypothetical protein PAU_02768 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781695|emb|CAQ84858.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 195
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + TG F G +YN+E L++LN L D+ + +DP+LFD ++ +Q
Sbjct: 51 RILHFDNLHTGETIKAEFFDGHRYNKEELARLNHLFRDYRQNRVKTIDPKLFDQIYLLQM 110
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
V + + ++SGYR+ TN L ++++ +A++S H LG+A+DF+I G+ L + K A++
Sbjct: 111 MLGVNKPVQLISGYRSLMTNNQLRKQSKGVAKQSYHTLGRAMDFHIEGIELSRIRKAALK 170
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+K GGVGYY S F+HID G VR+W
Sbjct: 171 MKAGGVGYYPNSNFIHIDTGPVRTW 195
>gi|85058982|ref|YP_454684.1| hypothetical protein SG1004 [Sodalis glossinidius str. 'morsitans']
gi|84779502|dbj|BAE74279.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 182
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG F G Y+Q LS+LN D+ + + +DPQLFD L+ +Q
Sbjct: 38 RMLTLNNLHTGETLKTEFFNGKSYDQSELSRLNHFFCDFRANKITTIDPQLFDHLYRLQT 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + ++SGYRT +TN L ++ +A+ S H LGKA+DF+I G L + K A++
Sbjct: 98 VLQTRKPVQLISGYRTVQTNNSLRAKSEGVAKHSYHTLGKAMDFHIEGTPLSLILKAALK 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+HID G R+W
Sbjct: 158 LHMGGVGYYPRSNFVHIDTGPERTW 182
>gi|127512757|ref|YP_001093954.1| hypothetical protein Shew_1829 [Shewanella loihica PV-4]
gi|126638052|gb|ABO23695.1| protein of unknown function DUF882 [Shewanella loihica PV-4]
Length = 163
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+ VR+L Y TG + ++ Y L+ N LL D ++ MD +LFD L+
Sbjct: 16 QGVRSLGFYNRHTGERGQGSYWIDGDYQTNTLNDFNHLLRDHRQNETAPMDKRLFDLLFS 75
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
++Q V E +++SGYR+ +TN+ML+ R+ +A+KS H+ G A+D +P V+L+ L
Sbjct: 76 LKQTLQVDEDFHVISGYRSPKTNQMLANRSSAVAKKSYHMKGMAMDIALPDVNLKDLRDA 135
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+H+D G +R+W
Sbjct: 136 AISLKLGGVGYYPSSGFVHVDTGPIRTW 163
>gi|209965709|ref|YP_002298624.1| hypothetical protein RC1_2427 [Rhodospirillum centenum SW]
gi|209959175|gb|ACI99811.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 219
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R+L+ + T + VT+ +Y + L +N +L DW + + D DP L D L+ +QQ
Sbjct: 74 RSLEFRHLHTNERLRVTYWSEGRYLPDALVDVNHVLRDWRTGEVGDTDPGLLDILFRMQQ 133
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
E +++ GYR +TN ML+ R+ +A KS H++GKA+D +PG L+ + ++A+
Sbjct: 134 RLRTTEPFHVICGYRCPQTNAMLASRSGGVATKSLHMVGKAIDIDVPGRQLQQIRQVALD 193
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
L+ GGVGYY K F+H+D GRVR W
Sbjct: 194 LQMGGVGYYPKSGFVHVDTGRVRHW 218
>gi|262275621|ref|ZP_06053430.1| hypothetical protein VHA_002602 [Grimontia hollisae CIP 101886]
gi|262219429|gb|EEY70745.1| hypothetical protein VHA_002602 [Grimontia hollisae CIP 101886]
Length = 183
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L ++ V+T V + G Y + L LN L D S DMDP+L+D L I
Sbjct: 39 RNLDMFSVNTREHVDVCYFNGQTYLESELGSLNHLCRDHRRNASTDMDPRLYDQLAAIYD 98
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I ++SGYR+ TN+ML +R A+KS H+ G+A+DF+I V L L K A+
Sbjct: 99 FVDARNPITMVSGYRSPVTNEMLRKRGGGQAKKSYHMTGQAIDFFIEDVPLSKLRKAAVE 158
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
L+ GGVGYY K F+H+D G VRSW
Sbjct: 159 LQAGGVGYYPKSGFIHVDTGPVRSW 183
>gi|310767193|gb|ADP12143.1| hypothetical protein EJP617_24620 [Erwinia sp. Ejp617]
Length = 182
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y++ L++LN D+ + +S +DP LFD
Sbjct: 32 LSTARPRVLTLNNLHTGESLKTEFFNGKTYDKSELTRLNHFFRDYRANKSKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + + ++SGYR+ TN ML R+ +AR S H G+A+DF+I G++L ++
Sbjct: 92 LFRLQTLLNTRKPVQLISGYRSLATNNMLRERSDGVARHSYHTKGQAMDFHIEGITLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPVRRW 182
>gi|300024144|ref|YP_003756755.1| hypothetical protein Hden_2638 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525965|gb|ADJ24434.1| protein of unknown function DUF882 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 514
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q RT+ Y + T + VT+KRG+QY+ L Q+N ++ DW + ++ P D W
Sbjct: 31 QANERTISFYHIHTHERLTVTYKRGTQYDPAALKQINWIMRDWRKNEVKEISPATIDLAW 90
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+ + E I I+ G+R+ TN+ML + A+ SQH+ GKA+D P V L+ +
Sbjct: 91 EMHEELGSKEPISIICGFRSSGTNEMLRQTRGGQAKASQHITGKAIDITFPDVPLKKMRY 150
Query: 173 IAIRLKRGGVGYYS----KFLHIDVGRVRSW 199
A+ +RGGVGYY F+H+D VR W
Sbjct: 151 SALIRERGGVGYYPTSGIPFVHVDTANVRMW 181
>gi|227111942|ref|ZP_03825598.1| hypothetical protein PcarbP_03203 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|227329503|ref|ZP_03833527.1| hypothetical protein PcarcW_20026 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 182
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + F G +YN+ LS+LN D+ + + +DPQLFD
Sbjct: 32 LSTPRPRILTLNNLNTGERLKTEFFDGKRYNKSELSRLNHFFRDYRANKVKTIDPQLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR +TN L +R +A++S H G+A+DF+I GV L ++
Sbjct: 92 LYRLQVMLGTNKPVQLISGYRAIDTNNELRAHSRGVAKQSYHTKGQAMDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAAMKMRAGGVGYYPRSDFVHIDTGPVRTW 182
>gi|209694859|ref|YP_002262787.1| putative membrane associated peptidase [Aliivibrio salmonicida
LFI1238]
gi|208008810|emb|CAQ79013.1| putative membrane associated peptidase [Aliivibrio salmonicida
LFI1238]
Length = 183
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R L + TG K + G QY+ L +LN L D+ ++IDMD LFD L
Sbjct: 35 ESPRELAFKNLHTGEKLQSEYFNGQQYSNSELLKLNHLCRDFRRNETIDMDTGLFDQLSA 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
IQ+ + I+SGYR+ TN+ML + + +A+KS H+LGKA+DF + V L + K
Sbjct: 95 IQKVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEDVPLIEVRK 154
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID GRVR W
Sbjct: 155 AALSLKAGGVGYYPGSNFVHIDTGRVRFW 183
>gi|238792382|ref|ZP_04636016.1| hypothetical protein yinte0001_13100 [Yersinia intermedia ATCC
29909]
gi|238728308|gb|EEQ19828.1| hypothetical protein yinte0001_13100 [Yersinia intermedia ATCC
29909]
Length = 182
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRGYNKDELSRLNHLFRDYRANKVKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQVLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHSFHTKGQAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRNW 182
>gi|330722117|gb|EGH00027.1| exported protein [gamma proteobacterium IMCC2047]
Length = 186
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L+ Y + TG TF + ++ L +N LL D + + MDPQL L +++
Sbjct: 40 RHLQFYNLHTGESLNTTFCVDGVFVEDSLRDINTLLRDHRTGEVCVMDPQLLILLDDLKT 99
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ +I+SGYR+ TN MLS ++ +A+KS H+ GKA+D +PGV +R+L K A+
Sbjct: 100 LMGNKQPFHIVSGYRSPATNNMLSAQSNGVAKKSLHMQGKAIDVRVPGVDVRALQKSALA 159
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVG Y S F+H+DVGRVR W
Sbjct: 160 LKGGGVGLYTRSDFVHLDVGRVRYW 184
>gi|307131495|ref|YP_003883511.1| hypothetical protein Dda3937_03654 [Dickeya dadantii 3937]
gi|306529024|gb|ADM98954.1| conserved protein [Dickeya dadantii 3937]
Length = 182
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + V F G +YN++ LS+LN D+ + + +DP LFD
Sbjct: 32 LSTARPRILTLNNINTGERLKVEFFDGRRYNKDELSRLNHFFRDYRANKVKTIDPALFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN+ L ++ +A++S H GKA+DF+I G+ L ++
Sbjct: 92 LYRLQVMLGSTKPVQLISGYRSYSTNEDLRSHSKGVAKQSYHTQGKAMDFHIEGIQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G +R+W
Sbjct: 152 RKAAMKMRAGGVGYYPQSNFVHIDTGAIRTW 182
>gi|271500171|ref|YP_003333196.1| hypothetical protein Dd586_1625 [Dickeya dadantii Ech586]
gi|270343726|gb|ACZ76491.1| protein of unknown function DUF882 [Dickeya dadantii Ech586]
Length = 182
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG V F G +YN+ LS+LN D+ + + +DP LFD
Sbjct: 32 LSTARPRILTLNNINTGEHIKVEFFDGRRYNKAELSRLNHFFRDYRANKVKTIDPALFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN+ L ++ +A++S H GKA+DF+I GV L ++
Sbjct: 92 LYRLQVMLGTTKPVQLISGYRSYSTNEDLRSHSKGVAKQSYHTQGKAMDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAALKMRAGGVGYYPQSNFVHIDTGAVRTW 182
>gi|269139501|ref|YP_003296202.1| hypothetical protein ETAE_2156 [Edwardsiella tarda EIB202]
gi|267985162|gb|ACY84991.1| hypothetical protein ETAE_2156 [Edwardsiella tarda EIB202]
gi|304559390|gb|ADM42054.1| Putative exported protein [Edwardsiella tarda FL6-60]
Length = 182
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + F G Y E L++LN D+ + Q +DP+LFD
Sbjct: 32 LSTPRPRVLVLNNLNTGERLRAEFFDGRAYIPEELARLNHFFRDYRANQVKRIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + I ++SGYR+ TN L R+R +A++S H G+A+DF+I GV+L ++
Sbjct: 92 IFRLQVMLGSKKPIQLVSGYRSPHTNSELRERSRGVAKQSFHTKGQAMDFHIDGVTLANV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+R++ GGVGYY S F+HID G VRSW
Sbjct: 152 RKAAMRMRAGGVGYYPRSNFVHIDTGPVRSW 182
>gi|253688168|ref|YP_003017358.1| hypothetical protein PC1_1781 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754746|gb|ACT12822.1| protein of unknown function DUF882 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 182
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + F G +YN+ LS+LN D+ + + +DPQLFD
Sbjct: 32 LSTPRPRILTLDNLNTGERLKTEFFDGKRYNKSELSRLNHFFRDYRANKIKTIDPQLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR +TN L +R +A++S H G+A+DF+I GV L ++
Sbjct: 92 LYRLQVMLGTNKPVQLISGYRAIDTNNELRAHSRGVAKQSYHTKGQAMDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAAMKMRAGGVGYYPRSDFVHIDTGPVRTW 182
>gi|317491481|ref|ZP_07949917.1| peptidase M15 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921028|gb|EFV42351.1| peptidase M15 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 182
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + F G Y QE L++LN L D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILVLNNLNTGEQLKAEFFDGKNYIQEELARLNHLFRDYRANKVKRIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + I ++SGYR+ TN L R +A+ S H LG+A+DF+I GV L ++
Sbjct: 92 IFRLQAMIGTRKPIQLISGYRSPRTNSELRERGSGVAKHSYHTLGQAMDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPVRNW 182
>gi|119774750|ref|YP_927490.1| hypothetical protein Sama_1613 [Shewanella amazonensis SB2B]
gi|119767250|gb|ABL99820.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 163
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 90/149 (60%), Gaps = 14/149 (9%)
Query: 65 STGSKAIVTFKRGSQ------------YNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
+ GS+ + F R +Q Y +E L+ + LL D + + MD +L+D L+
Sbjct: 15 TQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRANIAAPMDKRLYDLLF 74
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+Q+ + I+I+SGYR+ +TN ML++++ +A+KS H+ GKA+D IPG+ L L
Sbjct: 75 HLQENLKTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAIDIAIPGIRLDRLRD 134
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A LK GGVGYY S F+H+DVGRVRSW
Sbjct: 135 AAKELKLGGVGYYPQSGFVHVDVGRVRSW 163
>gi|320109077|ref|YP_004184667.1| hypothetical protein AciPR4_3924 [Terriglobus saanensis SP1PR4]
gi|319927598|gb|ADV84673.1| protein of unknown function DUF882 [Terriglobus saanensis SP1PR4]
Length = 244
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
L++ + TG V +++G++Y+ EG+++LN L D + + + DP F+ L ++
Sbjct: 75 LRLRHLHTGEALNVVYRQGTEYSAEGIAKLNTFLRDHRTMDTANYDPAEFELLHKLMAKL 134
Query: 119 SVPE-YIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
P I I+ GYRT ETN ML R +A SQH+L KA+D +PG+S R+L A+
Sbjct: 135 GRPNGEIDIVCGYRTPETNHMLRTRAALTGVAEHSQHMLSKAIDIRVPGISTRALRDAAL 194
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSWT 200
L GGVGYY S+F+H+DVG VR W+
Sbjct: 195 SLGLGGVGYYPISQFVHVDVGPVRQWS 221
>gi|84393106|ref|ZP_00991871.1| hypothetical protein V12B01_23579 [Vibrio splendidus 12B01]
gi|84376263|gb|EAP93146.1| hypothetical protein V12B01_23579 [Vibrio splendidus 12B01]
Length = 182
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RT+ + + TG + + G+ Y + +++L++L D+ + MD LFD + +
Sbjct: 35 DQPRTISMNNLHTGERLETCYFDGTNYVGDEMARLSKLCRDFRRNEIHPMDKNLFDQITQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ + + + I+SGYR+ TN+ L ++ +A+KS H+LGKA+DF I GV+L+ L +
Sbjct: 95 IQNVLGIQKEVQIISGYRSPATNEALRSKSSGVAKKSYHMLGKAIDFRIDGVNLKELRDV 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A L GGVGYY S F+HID G VRSW
Sbjct: 155 AKSLNAGGVGYYARSNFIHIDTGPVRSW 182
>gi|148978884|ref|ZP_01815204.1| hypothetical protein VSWAT3_22275 [Vibrionales bacterium SWAT-3]
gi|145962082|gb|EDK27368.1| hypothetical protein VSWAT3_22275 [Vibrionales bacterium SWAT-3]
Length = 182
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RT+ + + TG + + G+ Y + +++L++L D+ + MD LFD + +
Sbjct: 35 DQPRTISMNNLHTGERLETCYFDGTNYIGDEMARLSKLCRDFRRNEIHPMDKNLFDQITQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ + + + I+SGYR+ TN+ L ++ +A+KS H+LGKA+DF I GV L+ L +
Sbjct: 95 IQNILGIQKEVQIISGYRSPATNEALRSKSSGVAKKSYHMLGKAIDFRIDGVDLKELRDV 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A L+ GGVGYY S F+HID G VRSW
Sbjct: 155 AKSLQAGGVGYYARSNFIHIDTGPVRSW 182
>gi|291616921|ref|YP_003519663.1| YcbK [Pantoea ananatis LMG 20103]
gi|291151951|gb|ADD76535.1| YcbK [Pantoea ananatis LMG 20103]
gi|327393348|dbj|BAK10770.1| twin-arginine translocation Pathway signal YcbK [Pantoea ananatis
AJ13355]
Length = 182
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
+++M+S L R L + + TG F G Y++ LS+LN D+ + ++
Sbjct: 26 ETAMAS--LSTSRPRILTLNNLHTGETLKTEFFNGKSYDKSELSRLNHFFRDYRANKTKS 83
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+DP LFD L+ +Q + + ++SGYR+ TN ML +A+ S H G+A+DF+I
Sbjct: 84 IDPHLFDQLYRLQALLETRKPVQLVSGYRSLATNNMLRESGPGVAKHSYHTKGQAMDFHI 143
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GV+L ++ K A++++ GGVGYY S F+HID G VR W
Sbjct: 144 EGVTLANVRKAALKMRAGGVGYYPSSNFVHIDTGPVRHW 182
>gi|157369970|ref|YP_001477959.1| hypothetical protein Spro_1727 [Serratia proteamaculans 568]
gi|157321734|gb|ABV40831.1| protein of unknown function DUF882 [Serratia proteamaculans 568]
Length = 182
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G YN++ L +LN L D+ + + +DP+LFD
Sbjct: 32 LSTSRPRILVVNNMHTGESLKAEFFDGKGYNKDELVRLNHLFRDYRANKVKSIDPRLFDH 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTNKPVQLVSGYRSLDTNNELRARSRGVAKHSYHTKGQAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAALKMSAGGVGYYPRSNFVHIDTGPVRTW 182
>gi|295688992|ref|YP_003592685.1| hypothetical protein Cseg_1580 [Caulobacter segnis ATCC 21756]
gi|295430895|gb|ADG10067.1| protein of unknown function DUF882 [Caulobacter segnis ATCC 21756]
Length = 212
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R + ++ + TG K + Y + + LN++L D+ + Q MDP L+D L +I
Sbjct: 63 ETRWVHLHNIHTGEKLEAAYWENGDYVPDAVQALNKVLRDYRNDQVHPMDPGLYDILAKI 122
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q ++SGYR+ TNKML+ R+ ++A+ S H+ GKA+D Y+ V+L + A
Sbjct: 123 QARTEAKSPFQVISGYRSPATNKMLANRSGEVAKHSLHMEGKAMDIYLEDVALEHVRAAA 182
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ L GGVGYY S+F+H+DVGRVR W
Sbjct: 183 LDLGMGGVGYYPQSRFVHVDVGRVRQW 209
>gi|320540486|ref|ZP_08040136.1| putative conserved protein [Serratia symbiotica str. Tucson]
gi|320029417|gb|EFW11446.1| putative conserved protein [Serratia symbiotica str. Tucson]
Length = 164
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG F G YN+E L +LN L D+ S + +DP LFD L+ +Q
Sbjct: 20 RILVVNNLNTGESIKAEFFDGKGYNKEELVRLNYLFRDYRSHKIKSIDPCLFDHLYRLQG 79
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + ++SGYR+ +TN L +R +AR S H G+A+DF+I G+ L ++ K A++
Sbjct: 80 LLGTSKPVQLISGYRSLDTNNELRAHSRGVARHSYHTKGQAMDFHIEGIQLSNIRKAALK 139
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVGYY S F+HID G RSW
Sbjct: 140 MHAGGVGYYPRSNFVHIDTGPARSW 164
>gi|294636884|ref|ZP_06715214.1| nonpeptidase, peptidase M15 family [Edwardsiella tarda ATCC 23685]
gi|291089914|gb|EFE22475.1| nonpeptidase, peptidase M15 family [Edwardsiella tarda ATCC 23685]
Length = 182
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+L I + ++ L R L + ++TG + F G Y E L++LN
Sbjct: 13 ALGGAAIGFALLPGVAQATLSTPRPRVLVLNNLNTGERLRAEFFDGQAYIPEELARLNHF 72
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
D+ + Q +DP+LFD ++ +Q + I ++SGYR+ TN+ L R+R +A++S
Sbjct: 73 FRDYRANQVKRIDPRLFDQIFRLQLLLGNQKPIQLVSGYRSPLTNRELRARSRGVAKQSY 132
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV+L ++ K A++++ GGVGYY S F+HID G VRSW
Sbjct: 133 HTKGQAMDFHIEGVALANIRKAALKMRAGGVGYYPRSNFVHIDTGPVRSW 182
>gi|50121469|ref|YP_050636.1| hypothetical protein ECA2545 [Pectobacterium atrosepticum SCRI1043]
gi|261821333|ref|YP_003259439.1| hypothetical protein Pecwa_2053 [Pectobacterium wasabiae WPP163]
gi|49611995|emb|CAG75444.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
gi|261605346|gb|ACX87832.1| protein of unknown function DUF882 [Pectobacterium wasabiae WPP163]
Length = 182
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG + F G +YN+ LS+LN D+ + + +DPQLFD
Sbjct: 32 LSTPRPRILTLDNLNTGERLKTEFFDGKRYNKSELSRLNHFFRDYRANKVKMIDPQLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR +TN L +R +A++S H G+A+DF+I GV L ++
Sbjct: 92 LYRLQVMLGTNKPVQLISGYRAIDTNNELRAHSRGVAKQSYHTKGQAMDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A +++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAATKMRAGGVGYYPRSDFVHIDTGPVRTW 182
>gi|293396753|ref|ZP_06641029.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421017|gb|EFE94270.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 182
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G YN+E L++LN L D+ + + +DP+LFD
Sbjct: 32 LSTSRPRILVVNNLHTGESLKAEFFDGKGYNKEELARLNHLFRDYRANKVKSIDPRLFDH 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN L +R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTSKPVQLVSGYRSLGTNNELRSHSRGVAKHSYHTKGQAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPARTW 182
>gi|167945933|ref|ZP_02533007.1| hypothetical protein Epers_05057 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 155
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ +++ R++ ++ + TG + + + +Y E L +LN+LL D + S MDP+L D
Sbjct: 5 IGKQQERSIALHHLHTGEREKLAYWADGEYLAENLRRLNQLLRDHRTGDSTLMDPKLLDL 64
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q ++SGYR+ ++N ML ++ +A++S H+ GKA+D +PG L+ L
Sbjct: 65 LYRLQSSVGRVGEFQVISGYRSPKSNAMLRGKSNGVAKRSLHMQGKAIDVRLPGTELKEL 124
Query: 171 YKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
K A+ LK GGVG+Y K F+H+D GRVR W
Sbjct: 125 RKAALALKAGGVGFYPKSNFIHVDTGRVRFW 155
>gi|270261209|ref|ZP_06189482.1| putative exported protein, Tat-dependent [Serratia odorifera 4Rx13]
gi|270044693|gb|EFA17784.1| putative exported protein, Tat-dependent [Serratia odorifera 4Rx13]
Length = 182
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G YN++ L +LN L D+ + + +DP+LFD
Sbjct: 32 LSTSRPRILVVNNMHTGETLKAEFFDGKGYNKDELVRLNHLFRDYRANKIKPIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+ L ++
Sbjct: 92 LYRLQGLLGTNKPVQLVSGYRSLDTNNELRERSRGVAKHSYHTKGQAMDFHIEGIQLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR+W
Sbjct: 152 RKAALKMRGGGVGYYPRSNFVHIDTGPVRTW 182
>gi|261344275|ref|ZP_05971919.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
gi|282567878|gb|EFB73413.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
Length = 182
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 98/165 (59%), Gaps = 7/165 (4%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
L+ H ++MS+ R L+ + TG F G +YN+ L++LN L D
Sbjct: 23 LLPNHVLAAMST-----PRPRILRFQNIHTGEFLKTEFFDGRRYNKSELARLNHLFRDHR 77
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
S + +DP+LFD ++ +Q + + + ++SGYR+ ETN L R++ +A++S H G+
Sbjct: 78 SDKVKTIDPKLFDQIYILQMMMGINKPVQLISGYRSLETNNELRRKSSGVAKQSYHTRGQ 137
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
A+DF+I G+ L ++ K A+++ GGVGYY K F+HID G VR+W
Sbjct: 138 AMDFHIEGLQLSNVRKAALKMSAGGVGYYPKSNFIHIDTGPVRTW 182
>gi|86148446|ref|ZP_01066736.1| hypothetical protein MED222_11803 [Vibrio sp. MED222]
gi|85833743|gb|EAQ51911.1| hypothetical protein MED222_11803 [Vibrio sp. MED222]
Length = 182
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RT+ + + TG + + G+ Y + +++L++L D+ + MD LFD + +
Sbjct: 35 DQPRTISMNNLHTGERLETCYFDGTNYVGDEMARLSKLCRDFRRNEIHPMDKNLFDQITQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ + + + I+SGYR+ TN+ L ++ +A+KS H+LGKA+DF I GV+L+ L +
Sbjct: 95 IQNVLGIQKEVQIISGYRSPATNEALRSKSSGVAKKSYHMLGKAIDFRIDGVNLKELRDV 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A L GGVGYY S F+HID G RSW
Sbjct: 155 AKSLNAGGVGYYARSNFIHIDTGPARSW 182
>gi|296103071|ref|YP_003613217.1| hypothetical protein ECL_02727 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057530|gb|ADF62268.1| hypothetical protein ECL_02727 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 183
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELARLNHFFRDFRANKVKAIDPGLFDQ 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I GVSL ++
Sbjct: 93 LFRLQGLLGTSKPVQLISGYRSIDTNNELRARSRGVAKKSYHTRGQAMDFHIEGVSLANI 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 153 RKAALSMRAGGVGYYPSSNFVHIDTGPVRHW 183
>gi|262171697|ref|ZP_06039375.1| hypothetical protein VII_002520 [Vibrio mimicus MB-451]
gi|261892773|gb|EEY38759.1| hypothetical protein VII_002520 [Vibrio mimicus MB-451]
Length = 182
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG + G Y + L +LN L D+ + MD LFD L +IQQ
Sbjct: 35 RELALSNLHTGESIETRYFNGKDYVRSELKRLNHLCRDFRRDEVHAMDRVLFDHLCQIQQ 94
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI
Sbjct: 95 LLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAIS 154
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S+F+HID G VR W
Sbjct: 155 LQAGGVGYYPKSRFIHIDTGPVRQW 179
>gi|329298735|ref|ZP_08256071.1| hypothetical protein Pstas_23589 [Plautia stali symbiont]
Length = 183
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 2/146 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG F G Y+++ L++LN D+ + Q +DP LFD L+ +Q
Sbjct: 38 RVLTLSNMHTGETLKTEFFNGKSYDKDELARLNHFFRDYRANQVKHIDPHLFDQLYRLQT 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + + ++SGYRT TN ML +A+ S H+ G+A+DF+I G+SL ++ K A+
Sbjct: 98 LLNTRKPVQLISGYRTLATNNMLRESGPGVAKHSYHIKGQAMDFHIEGISLSNVRKAALS 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSWT 200
++ GG+GYY S F+HID G R W+
Sbjct: 158 MRAGGIGYYPRSNFVHIDTGPARHWS 183
>gi|320177117|gb|EFW52132.1| hypothetical protein SDB_00380 [Shigella dysenteriae CDC 74-1112]
Length = 182
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 HKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|188534255|ref|YP_001908052.1| hypothetical protein ETA_21280 [Erwinia tasmaniensis Et1/99]
gi|188029297|emb|CAO97174.1| Putative exported protein [Erwinia tasmaniensis Et1/99]
Length = 182
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y++ L++LN D+ + +S +DP LFD
Sbjct: 32 LSTARPRILTLNNLHTGESLKTEFFNGKSYDKSELARLNHFFRDYRANKSKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L +Q + + + ++SGYR+ TN ML +A+ S H LG+A+DF+I G++L ++
Sbjct: 92 LSRLQALLNTRKPVQLISGYRSLVTNNMLRENGDGVAKHSYHTLGQAMDFHIEGITLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 152 RKAALALRSGGVGYYPKSNFVHIDTGPVRHW 182
>gi|218709905|ref|YP_002417526.1| hypothetical protein VS_1918 [Vibrio splendidus LGP32]
gi|218322924|emb|CAV19101.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RT+ + + TG + + G+ Y + +++L++L D+ + MD LFD + +
Sbjct: 59 DQPRTISMNNLHTGERLETCYFDGANYVGDEMARLSKLCRDFRRNEIHPMDKNLFDQITQ 118
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ + + + I+SGYR+ TN+ L ++ +A+KS H+LGKA+DF I GV+L+ L +
Sbjct: 119 IQNVLGIQKEVQIISGYRSPATNEALRSKSSGVAKKSYHMLGKAIDFRIDGVNLKELRDV 178
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A L GGVGYY S F+HID G RSW
Sbjct: 179 AKSLNAGGVGYYARSNFIHIDTGPARSW 206
>gi|308273622|emb|CBX30224.1| Uncharacterized protein ycbK [uncultured Desulfobacterium sp.]
Length = 181
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E +TL Y + T + +Y + LS++N +L D + + +DPQL D L +
Sbjct: 35 EKKTLSFYNIHTQETLSADYWVNGEYMPDALSRINYILRDHRTDKIQPIDPQLLDILHVL 94
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + + +I+SGYR+QETN +L ++ R +AR S H+LGKA+D +PG L L A
Sbjct: 95 RTQITENQPFHIISGYRSQETNALLRKQGRGVARHSYHILGKAIDIRLPGCCLPELRDAA 154
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+L+ GGVGYY S+F+H+D G VR W
Sbjct: 155 RKLEMGGVGYYPRSEFIHVDTGPVRHW 181
>gi|152969510|ref|YP_001334619.1| hypothetical protein KPN_00953 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|330013903|ref|ZP_08307827.1| Tat pathway signal sequence domain protein [Klebsiella sp. MS 92-3]
gi|150954359|gb|ABR76389.1| hypothetical protein KPN_00953 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|328533308|gb|EGF60057.1| Tat pathway signal sequence domain protein [Klebsiella sp. MS 92-3]
Length = 218
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 68 LSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDH 127
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+SL ++
Sbjct: 128 LYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEGISLSNI 187
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 188 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 218
>gi|317047573|ref|YP_004115221.1| hypothetical protein Pat9b_1344 [Pantoea sp. At-9b]
gi|316949190|gb|ADU68665.1| protein of unknown function DUF882 [Pantoea sp. At-9b]
Length = 183
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG F G Y+++ L++LN D+ + Q +DP LFD ++ +Q
Sbjct: 38 RILTLNNLHTGETLKTEFFNGKSYDKDELARLNHFFRDYRANQIRTIDPHLFDQIYRLQA 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I ++SGYRT TN ML +A+ S H G+A+DF+I G+SL ++ K A+
Sbjct: 98 ALGTRKPIQLVSGYRTIATNNMLRESGPGVAKHSYHTKGQAMDFHIEGISLSNVRKAALS 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSWT 200
L+ GGVGYY S F+HID G VR W+
Sbjct: 158 LRAGGVGYYPRSNFVHIDTGPVRHWS 183
>gi|145298229|ref|YP_001141070.1| hypothetical protein ASA_1214 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851001|gb|ABO89322.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 181
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG + ++ +Y Q+GL++LN + D+ + ++D +LFD L+ +Q
Sbjct: 37 RELSFFNLNTGERVQASYWENGRYLQDGLAELNHIFRDYRRNEVFNIDKKLFDQLYLLQH 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I ++SGYR+ TN+ ++R +A+ S H LG+AVD IPGV L L K A+
Sbjct: 97 KLGRNGEIQLISGYRSPATNRQKRSKSRGVAKHSYHTLGQAVDVRIPGVQLAHLRKAALN 156
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY F+H+D G VRSW
Sbjct: 157 LKVGGVGYYPSDNFVHLDTGPVRSW 181
>gi|206575875|ref|YP_002239426.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Klebsiella
pneumoniae 342]
gi|288936276|ref|YP_003440335.1| hypothetical protein Kvar_3423 [Klebsiella variicola At-22]
gi|206564933|gb|ACI06709.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Klebsiella
pneumoniae 342]
gi|288890985|gb|ADC59303.1| protein of unknown function DUF882 [Klebsiella variicola At-22]
Length = 183
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDH 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+SL ++
Sbjct: 93 LYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEGISLSNI 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 153 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|290510668|ref|ZP_06550038.1| hypothetical protein HMPREF0485_02438 [Klebsiella sp. 1_1_55]
gi|289777384|gb|EFD85382.1| hypothetical protein HMPREF0485_02438 [Klebsiella sp. 1_1_55]
Length = 208
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 58 LSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDH 117
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+SL ++
Sbjct: 118 LYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEGISLSNI 177
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 178 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 208
>gi|238893982|ref|YP_002918716.1| hypothetical protein KP1_1926 [Klebsiella pneumoniae NTUH-K2044]
gi|238546298|dbj|BAH62649.1| hypothetical protein KP1_1926 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 186
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 36 LSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDH 95
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+SL ++
Sbjct: 96 LYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEGISLSNI 155
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 156 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 186
>gi|315180000|gb|ADT86914.1| lipoprotein, hypothetical [Vibrio furnissii NCTC 11218]
Length = 182
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ R L + + TG + G +Y + L +LN + D+ + MD +LFD +
Sbjct: 32 DKPRVLAMNNLHTGETLETCYFNGQRYVRSELQRLNHICRDFRQNEVHQMDKKLFDQISR 91
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ + I+SGYR+ TN+ML ++ +A+KS H+LG+A+DF + GVSL+ +++
Sbjct: 92 IQAVLGTEAEVQIISGYRSPATNEMLRGKSSGVAKKSFHMLGQAIDFRLDGVSLKQIHEA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S+F+HID G VR W
Sbjct: 152 ALSLKAGGVGYYPKSQFVHIDTGPVRQW 179
>gi|262040974|ref|ZP_06014196.1| tat pathway signal sequence domain protein [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259041668|gb|EEW42717.1| tat pathway signal sequence domain protein [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 183
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDH 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+SL ++
Sbjct: 93 LYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEGISLSNI 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 153 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|194434378|ref|ZP_03066641.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Shigella
dysenteriae 1012]
gi|194417362|gb|EDX33468.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Shigella
dysenteriae 1012]
gi|320182005|gb|EFW56910.1| hypothetical protein SGB_00727 [Shigella boydii ATCC 9905]
gi|332095861|gb|EGJ00868.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella dysenteriae 155-74]
Length = 182
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|258620189|ref|ZP_05715228.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624451|ref|ZP_05719398.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258583298|gb|EEW08100.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258587547|gb|EEW12257.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 182
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG + G Y + L +LN L D+ + MD LFD L +IQQ
Sbjct: 35 RELALSNLHTGESIETRYFNGKDYVRSELKRLNHLCRDFRRDEVHAMDRVLFDQLCQIQQ 94
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI
Sbjct: 95 LLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAIS 154
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S+F+HID G VR W
Sbjct: 155 LQAGGVGYYPKSRFIHIDTGPVRQW 179
>gi|332092542|gb|EGI97615.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella boydii 5216-82]
Length = 182
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|268590140|ref|ZP_06124361.1| nonpeptidase, peptidase M15 family [Providencia rettgeri DSM 1131]
gi|291314413|gb|EFE54866.1| nonpeptidase, peptidase M15 family [Providencia rettgeri DSM 1131]
Length = 182
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L+ ++TG F G +YN+ L++LN D+ + +DP+LFD ++ +Q
Sbjct: 38 RILRFQNINTGESLKTEFFDGRRYNKSELARLNHFFRDYRCDKVKTIDPKLFDQIYLLQM 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + ++SGYR+ ETN L ++ +A+KS H G+A+DF+I G+ L ++ K A++
Sbjct: 98 MMGTNKPVQLISGYRSLETNNKLRSKSSGVAKKSYHTRGQAMDFHIEGLQLSNIRKAALK 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+K GGVGYY S F+HID G R+W
Sbjct: 158 MKAGGVGYYPRSNFIHIDTGPARTW 182
>gi|256830356|ref|YP_003159084.1| hypothetical protein Dbac_2591 [Desulfomicrobium baculatum DSM
4028]
gi|256579532|gb|ACU90668.1| protein of unknown function DUF882 [Desulfomicrobium baculatum DSM
4028]
Length = 184
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q R+L T K + + G +Y E L +LN LL D +S Q MDP+LFD+L+
Sbjct: 35 QTGARSLAFEHTHTREKLRIVYAVGDKYVPEALKKLNHLLRDHYSGQVCRMDPKLFDYLF 94
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNR-KIARKSQHVLGKAVDFYIPGVSLRSLY 171
++Q ++SGYR TN L +++R +A++S H+ GKA+D I GVSL L
Sbjct: 95 RLKQTLGSDAPFQVISGYRCPATNTKLRQKSRGGVAKRSLHMEGKALDIRISGVSLHDLR 154
Query: 172 KIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A +RGGVG+Y KF+H+D G VRSW
Sbjct: 155 DAAKASRRGGVGFYPQDKFVHVDTGAVRSW 184
>gi|53804851|ref|YP_113297.1| Tat pathway signal sequence domain-containing protein
[Methylococcus capsulatus str. Bath]
gi|53758612|gb|AAU92903.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Methylococcus capsulatus str. Bath]
Length = 195
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
RTL +Y TG + Y++ L Q + L D H+ +S MDP L D L+ I
Sbjct: 51 RTLYLYNKHTGEDMTLVCCPERNYDRALLRQFSHFLRDHHADESYPMDPGLIDILYAISA 110
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I+SGYRT ETN+ML R + +A S H+ GKA+D + VS R++ K A+
Sbjct: 111 MTRSSGTFEIISGYRTPETNRMLRRHSHGVAEHSLHMEGKAIDLRMSDVSTRTIRKTALA 170
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY + F+H+D GR+RSW
Sbjct: 171 LQYGGVGYYRRADFVHLDTGRIRSW 195
>gi|320156748|ref|YP_004189127.1| hypothetical protein VVM_03484 [Vibrio vulnificus MO6-24/O]
gi|319932060|gb|ADV86924.1| exported protein [Vibrio vulnificus MO6-24/O]
Length = 169
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RTL + + TG + GS Y E L++++++ D+ + MD +LFD L +
Sbjct: 22 DQPRTLALNNLHTGELLETCYFDGSTYLIEELARIDKICRDFRQNEVHPMDRRLFDHLTQ 81
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + I+SGYR+ +TN L ++ +A+KS H+LG+A+DF + GV L ++
Sbjct: 82 IQKLIGTENEVQIISGYRSPQTNAALRAKSSGVAKKSYHMLGRAIDFRLDGVKLSTVRDA 141
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ L+ GGVGYY S F+HID G VRSW
Sbjct: 142 ALSLEAGGVGYYPGSNFVHIDTGPVRSW 169
>gi|212635581|ref|YP_002312106.1| hypothetical protein swp_2793 [Shewanella piezotolerans WP3]
gi|212557065|gb|ACJ29519.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 163
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+L Y TG + ++ Y + L+ +++L D +S MD +LFDF + ++
Sbjct: 18 VRSLGFYNRHTGERGQGSYWIDGDYQSDILTDFSQVLRDHRQNESAPMDKRLFDFAYLLK 77
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ + ++I+SGYR+ +TN+ML++R+ +A+KS H+ G A+D +PGV L + A+
Sbjct: 78 ESLGYDDELHIISGYRSPKTNQMLAKRSNGVAKKSYHMKGMALDIAVPGVKLAEVRSAAL 137
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+HID G +RSW
Sbjct: 138 ALKLGGVGYYPNSGFVHIDTGPIRSW 163
>gi|170726507|ref|YP_001760533.1| hypothetical protein Swoo_2154 [Shewanella woodyi ATCC 51908]
gi|169811854|gb|ACA86438.1| protein of unknown function DUF882 [Shewanella woodyi ATCC 51908]
Length = 171
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+L + TG + ++ Y ++ LS+ + L D +S MD +L+D L++++
Sbjct: 26 VRSLGFNNLHTGERGFGSYWIDGNYQEKTLSEFSHTLRDHRRNESAPMDKRLYDLLFKLK 85
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+V E ++SGYR+ +TN ML+ +N +A+KS H+ G A+D +P V+L L AI
Sbjct: 86 LSLNVEEDFNVISGYRSPQTNAMLASKNNGVAKKSYHMKGMAMDIALPNVNLSDLRDAAI 145
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+H+D G VR+W
Sbjct: 146 ELKLGGVGYYPRSGFIHVDTGPVRTW 171
>gi|37680298|ref|NP_934907.1| hypothetical protein VV2114 [Vibrio vulnificus YJ016]
gi|326424106|ref|NP_761767.2| hypothetical protein VV1_2963 [Vibrio vulnificus CMCP6]
gi|37199045|dbj|BAC94878.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319999487|gb|AAO11294.2| Putative exported protein [Vibrio vulnificus CMCP6]
Length = 186
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RTL + + TG + GS Y E L++++++ D+ + MD +LFD L +
Sbjct: 39 DQPRTLALNNLHTGELLETCYFDGSTYLIEELARIDKICRDFRQNEVHPMDRRLFDHLTQ 98
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + I+SGYR+ +TN L ++ +A+KS H+LG+A+DF + GV L ++
Sbjct: 99 IQKLIGTENEVQIISGYRSPQTNAALRAKSSGVAKKSYHMLGRAIDFRLDGVKLSTVRDA 158
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ L+ GGVGYY S F+HID G VRSW
Sbjct: 159 ALSLEAGGVGYYPGSNFVHIDTGPVRSW 186
>gi|222109388|ref|YP_002551652.1| hypothetical protein Dtpsy_0167 [Acidovorax ebreus TPSY]
gi|221728832|gb|ACM31652.1| protein of unknown function DUF882 [Acidovorax ebreus TPSY]
Length = 190
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
+Q+ R L + T + + + +G Q+ L LN L D +S MDP LF L
Sbjct: 40 EQDLARRLAFNHLHTHERLALVYAQGEQFIPAALPTLNHFLRDHYSGDVGVMDPDLFHLL 99
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++Q + ++SGYR+ TN+ L + R +AR+S H+ GKA+D +PGVSL L
Sbjct: 100 HRVRQTLQTQQPFEVISGYRSPHTNETLRTTRGGGVARRSLHMDGKAIDVRLPGVSLSDL 159
Query: 171 YKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
AI L+ GGVGYY++ F+HID GRVRSW
Sbjct: 160 RDAAISLRAGGVGYYAREQFVHIDTGRVRSW 190
>gi|26246953|ref|NP_752993.1| hypothetical protein c1068 [Escherichia coli CFT073]
gi|91210028|ref|YP_540014.1| hypothetical protein UTI89_C0998 [Escherichia coli UTI89]
gi|26107353|gb|AAN79536.1|AE016758_140 Hypothetical protein ycbK [Escherichia coli CFT073]
gi|91071602|gb|ABE06483.1| conserved hypothetical protein [Escherichia coli UTI89]
gi|281600286|gb|ADA73270.1| hypothetical protein SFxv_0998 [Shigella flexneri 2002017]
Length = 185
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 35 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 94
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 95 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 154
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 155 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 185
>gi|113970170|ref|YP_733963.1| hypothetical protein Shewmr4_1832 [Shewanella sp. MR-4]
gi|114047640|ref|YP_738190.1| hypothetical protein Shewmr7_2145 [Shewanella sp. MR-7]
gi|117920335|ref|YP_869527.1| hypothetical protein Shewana3_1890 [Shewanella sp. ANA-3]
gi|113884854|gb|ABI38906.1| protein of unknown function DUF882 [Shewanella sp. MR-4]
gi|113889082|gb|ABI43133.1| protein of unknown function DUF882 [Shewanella sp. MR-7]
gi|117612667|gb|ABK48121.1| protein of unknown function DUF882 [Shewanella sp. ANA-3]
Length = 182
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 86/146 (58%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR L +Y TG ++ Y E L+ + LL D + MD +LFD L+ ++
Sbjct: 37 VRDLSLYNRHTGEHNNGSYWIDGHYQSEVLNDFSHLLRDHRQNVAAPMDKRLFDLLYTLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I+++SGYR+ +TN ML+ ++ +A+KS H+ G A+D IPGV+L++L A+
Sbjct: 97 STLNTENEIHVISGYRSPKTNAMLAGKSSGVAKKSYHMQGMAMDIAIPGVNLKTLRDAAL 156
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY K F+H+D G VR W
Sbjct: 157 SLKLGGVGYYPKSGFVHVDCGPVRHW 182
>gi|242239071|ref|YP_002987252.1| hypothetical protein Dd703_1633 [Dickeya dadantii Ech703]
gi|242131128|gb|ACS85430.1| protein of unknown function DUF882 [Dickeya dadantii Ech703]
Length = 182
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G +YN++ L++LN D+ + + +DP+LF+
Sbjct: 32 LSTSRPRMLTLNNLNTGEHLKAEFFDGRRYNKDELARLNHFFRDYRANKIKTIDPKLFEQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + ++SGYR+ TN+ L ++ +A++S H GKAVDF+I GV L ++
Sbjct: 92 LYRLQVMLGTQRPVQLISGYRSHNTNEDLRASSKGVAKQSYHTQGKAVDFHIEGVQLANI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++L GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKLGAGGVGYYPQSNFVHIDTGPARTW 182
>gi|15830263|ref|NP_309036.1| hypothetical protein ECs1009 [Escherichia coli O157:H7 str. Sakai]
gi|16128893|ref|NP_415446.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|30062461|ref|NP_836632.1| hypothetical protein S0987 [Shigella flexneri 2a str. 2457T]
gi|56479773|ref|NP_706845.2| hypothetical protein SF0923 [Shigella flexneri 2a str. 301]
gi|74311484|ref|YP_309903.1| hypothetical protein SSON_0929 [Shigella sonnei Ss046]
gi|82544668|ref|YP_408615.1| hypothetical protein SBO_2217 [Shigella boydii Sb227]
gi|82777550|ref|YP_403899.1| hypothetical protein SDY_2331 [Shigella dysenteriae Sd197]
gi|89107776|ref|AP_001556.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|110641123|ref|YP_668853.1| putative exported protein YcbK [Escherichia coli 536]
gi|110804935|ref|YP_688455.1| hypothetical protein SFV_0928 [Shigella flexneri 5 str. 8401]
gi|117623144|ref|YP_852057.1| YcbK [Escherichia coli APEC O1]
gi|157156554|ref|YP_001462145.1| Tat pathway signal sequence domain-containing protein [Escherichia
coli E24377A]
gi|157160447|ref|YP_001457765.1| Tat pathway signal sequence domain-containing protein [Escherichia
coli HS]
gi|168751190|ref|ZP_02776212.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4113]
gi|168757019|ref|ZP_02782026.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4401]
gi|168762936|ref|ZP_02787943.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4501]
gi|168769922|ref|ZP_02794929.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4486]
gi|168776220|ref|ZP_02801227.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4196]
gi|168787356|ref|ZP_02812363.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC869]
gi|170020672|ref|YP_001725626.1| hypothetical protein EcolC_2670 [Escherichia coli ATCC 8739]
gi|170080584|ref|YP_001729904.1| hypothetical protein ECDH10B_0996 [Escherichia coli str. K-12
substr. DH10B]
gi|170680996|ref|YP_001744244.1| Tat pathway signal sequence domain-containing protein [Escherichia
coli SMS-3-5]
gi|187730752|ref|YP_001880873.1| putative exported protein, Tat-dependent [Shigella boydii CDC
3083-94]
gi|188492466|ref|ZP_02999736.1| putative exported protein, Tat-dependent [Escherichia coli 53638]
gi|191166984|ref|ZP_03028807.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B7A]
gi|191172130|ref|ZP_03033674.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
F11]
gi|193064649|ref|ZP_03045728.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E22]
gi|193070747|ref|ZP_03051682.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E110019]
gi|194428400|ref|ZP_03060941.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B171]
gi|194438731|ref|ZP_03070818.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
101-1]
gi|195939659|ref|ZP_03085041.1| hypothetical protein EscherichcoliO157_25180 [Escherichia coli
O157:H7 str. EC4024]
gi|208809048|ref|ZP_03251385.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4206]
gi|208815947|ref|ZP_03257126.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4045]
gi|208822691|ref|ZP_03263010.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4042]
gi|209396717|ref|YP_002269598.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4115]
gi|209918176|ref|YP_002292260.1| hypothetical protein ECSE_0985 [Escherichia coli SE11]
gi|215486051|ref|YP_002328482.1| hypothetical protein E2348C_0919 [Escherichia coli O127:H6 str.
E2348/69]
gi|217324945|ref|ZP_03441029.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. TW14588]
gi|218553513|ref|YP_002386426.1| hypothetical protein ECIAI1_0967 [Escherichia coli IAI1]
gi|218557831|ref|YP_002390744.1| hypothetical protein ECS88_0954 [Escherichia coli S88]
gi|218688769|ref|YP_002396981.1| hypothetical protein ECED1_0956 [Escherichia coli ED1a]
gi|218694400|ref|YP_002402067.1| hypothetical protein EC55989_0972 [Escherichia coli 55989]
gi|218700555|ref|YP_002408184.1| hypothetical protein ECIAI39_2221 [Escherichia coli IAI39]
gi|218704354|ref|YP_002411873.1| hypothetical protein ECUMN_1120 [Escherichia coli UMN026]
gi|227884109|ref|ZP_04001914.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
83972]
gi|237707086|ref|ZP_04537567.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238900184|ref|YP_002925980.1| hypothetical protein BWG_0778 [Escherichia coli BW2952]
gi|253774045|ref|YP_003036876.1| hypothetical protein ECBD_2669 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161040|ref|YP_003044148.1| hypothetical protein ECB_00930 [Escherichia coli B str. REL606]
gi|254792125|ref|YP_003076962.1| hypothetical protein ECSP_1030 [Escherichia coli O157:H7 str.
TW14359]
gi|256020946|ref|ZP_05434811.1| hypothetical protein ShiD9_18657 [Shigella sp. D9]
gi|256023373|ref|ZP_05437238.1| hypothetical protein E4_08364 [Escherichia sp. 4_1_40B]
gi|260843175|ref|YP_003220953.1| hypothetical protein ECO103_0970 [Escherichia coli O103:H2 str.
12009]
gi|260854217|ref|YP_003228108.1| hypothetical protein ECO26_1052 [Escherichia coli O26:H11 str.
11368]
gi|260867098|ref|YP_003233500.1| hypothetical protein ECO111_0994 [Escherichia coli O111:H- str.
11128]
gi|261227429|ref|ZP_05941710.1| hypothetical protein EscherichiacoliO157_22956 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256148|ref|ZP_05948681.1| hypothetical protein EscherichiacoliO157EcO_10009 [Escherichia coli
O157:H7 str. FRIK966]
gi|291281927|ref|YP_003498745.1| hypothetical protein G2583_1161 [Escherichia coli O55:H7 str.
CB9615]
gi|293404230|ref|ZP_06648224.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|293409303|ref|ZP_06652879.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414206|ref|ZP_06656855.1| ycbK protein [Escherichia coli B185]
gi|293433223|ref|ZP_06661651.1| ycbK protein [Escherichia coli B088]
gi|297521035|ref|ZP_06939421.1| hypothetical protein EcolOP_25602 [Escherichia coli OP50]
gi|298380011|ref|ZP_06989616.1| ycbK protein [Escherichia coli FVEC1302]
gi|300823666|ref|ZP_07103793.1| Tat pathway signal sequence protein [Escherichia coli MS 119-7]
gi|300901644|ref|ZP_07119704.1| Tat pathway signal sequence protein [Escherichia coli MS 198-1]
gi|300902915|ref|ZP_07120860.1| Tat pathway signal sequence protein [Escherichia coli MS 84-1]
gi|300921036|ref|ZP_07137423.1| Tat pathway signal sequence [Escherichia coli MS 115-1]
gi|300925396|ref|ZP_07141281.1| Tat pathway signal sequence protein [Escherichia coli MS 182-1]
gi|300929621|ref|ZP_07145083.1| Tat pathway signal sequence protein [Escherichia coli MS 187-1]
gi|300937729|ref|ZP_07152530.1| Tat pathway signal sequence protein [Escherichia coli MS 21-1]
gi|300949711|ref|ZP_07163690.1| Tat pathway signal sequence [Escherichia coli MS 116-1]
gi|300955426|ref|ZP_07167800.1| Tat pathway signal sequence [Escherichia coli MS 175-1]
gi|300978415|ref|ZP_07174263.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1]
gi|300983087|ref|ZP_07176431.1| Tat pathway signal sequence [Escherichia coli MS 200-1]
gi|301022420|ref|ZP_07186303.1| Tat pathway signal sequence [Escherichia coli MS 196-1]
gi|301023048|ref|ZP_07186857.1| Tat pathway signal sequence protein [Escherichia coli MS 69-1]
gi|301047813|ref|ZP_07194865.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1]
gi|301302464|ref|ZP_07208595.1| Tat pathway signal sequence protein [Escherichia coli MS 124-1]
gi|301326640|ref|ZP_07219970.1| Tat pathway signal sequence [Escherichia coli MS 78-1]
gi|301643446|ref|ZP_07243494.1| Tat pathway signal sequence protein [Escherichia coli MS 146-1]
gi|306812621|ref|ZP_07446814.1| hypothetical protein ECNC101_11932 [Escherichia coli NC101]
gi|307137555|ref|ZP_07496911.1| hypothetical protein EcolH7_05411 [Escherichia coli H736]
gi|307311687|ref|ZP_07591327.1| protein of unknown function DUF882 [Escherichia coli W]
gi|309787799|ref|ZP_07682409.1| twin-arginine translocation pathway signal sequence domain protein
[Shigella dysenteriae 1617]
gi|309795088|ref|ZP_07689508.1| Tat pathway signal sequence [Escherichia coli MS 145-7]
gi|312969008|ref|ZP_07783215.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 2362-75]
gi|312971056|ref|ZP_07785235.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 1827-70]
gi|331641452|ref|ZP_08342587.1| putative outer membrane protein [Escherichia coli H736]
gi|331646191|ref|ZP_08347294.1| putative outer membrane protein [Escherichia coli M605]
gi|331651946|ref|ZP_08352965.1| putative outer membrane protein [Escherichia coli M718]
gi|331656997|ref|ZP_08357959.1| putative outer membrane protein [Escherichia coli TA206]
gi|331662340|ref|ZP_08363263.1| putative outer membrane protein [Escherichia coli TA143]
gi|331667304|ref|ZP_08368169.1| putative outer membrane protein [Escherichia coli TA271]
gi|331672462|ref|ZP_08373252.1| putative outer membrane protein [Escherichia coli TA280]
gi|331676714|ref|ZP_08377410.1| putative outer membrane protein [Escherichia coli H591]
gi|331682435|ref|ZP_08383054.1| putative outer membrane protein [Escherichia coli H299]
gi|332282169|ref|ZP_08394582.1| conserved hypothetical protein [Shigella sp. D9]
gi|77416811|sp|P0AB08|YCBK_ECO57 RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|77416812|sp|P0AB07|YCBK_ECOL6 RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|77416813|sp|P0AB06|YCBK_ECOLI RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|77416814|sp|P0AB09|YCBK_SHIFL RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|1787157|gb|AAC74012.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|4062493|dbj|BAA35672.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|13360468|dbj|BAB34432.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|30040707|gb|AAP16438.1| hypothetical protein S0987 [Shigella flexneri 2a str. 2457T]
gi|56383324|gb|AAN42552.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|73854961|gb|AAZ87668.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81241698|gb|ABB62408.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81246079|gb|ABB66787.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|110342715|gb|ABG68952.1| putative exported protein YcbK [Escherichia coli 536]
gi|110614483|gb|ABF03150.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115512268|gb|ABJ00343.1| YcbK [Escherichia coli APEC O1]
gi|157066127|gb|ABV05382.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
HS]
gi|157078584|gb|ABV18292.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E24377A]
gi|169755600|gb|ACA78299.1| protein of unknown function DUF882 [Escherichia coli ATCC 8739]
gi|169888419|gb|ACB02126.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170518714|gb|ACB16892.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
SMS-3-5]
gi|187427744|gb|ACD07018.1| putative exported protein, Tat-dependent [Shigella boydii CDC
3083-94]
gi|187768341|gb|EDU32185.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4196]
gi|188014716|gb|EDU52838.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4113]
gi|188487665|gb|EDU62768.1| putative exported protein, Tat-dependent [Escherichia coli 53638]
gi|189355947|gb|EDU74366.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4401]
gi|189361182|gb|EDU79601.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4486]
gi|189366785|gb|EDU85201.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4501]
gi|189372770|gb|EDU91186.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC869]
gi|190902978|gb|EDV62704.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B7A]
gi|190907657|gb|EDV67252.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
F11]
gi|192927706|gb|EDV82321.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E22]
gi|192955940|gb|EDV86408.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E110019]
gi|194413615|gb|EDX29896.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B171]
gi|194422363|gb|EDX38363.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
101-1]
gi|208728849|gb|EDZ78450.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4206]
gi|208732595|gb|EDZ81283.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4045]
gi|208738176|gb|EDZ85859.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4042]
gi|209158117|gb|ACI35550.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4115]
gi|209774738|gb|ACI85681.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774740|gb|ACI85682.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774742|gb|ACI85683.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774744|gb|ACI85684.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774746|gb|ACI85685.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209911435|dbj|BAG76509.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215264123|emb|CAS08467.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217321166|gb|EEC29590.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. TW14588]
gi|218351132|emb|CAU96836.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218360281|emb|CAQ97831.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218364600|emb|CAR02286.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370541|emb|CAR18348.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218426333|emb|CAR07158.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|218431451|emb|CAR12329.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222032657|emb|CAP75396.1| Uncharacterized protein ycbK [Escherichia coli LF82]
gi|226898296|gb|EEH84555.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227838861|gb|EEJ49327.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
83972]
gi|238860455|gb|ACR62453.1| conserved protein [Escherichia coli BW2952]
gi|242376741|emb|CAQ31454.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253325089|gb|ACT29691.1| protein of unknown function DUF882 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972941|gb|ACT38612.1| hypothetical protein ECB_00930 [Escherichia coli B str. REL606]
gi|253977155|gb|ACT42825.1| hypothetical protein ECD_00930 [Escherichia coli BL21(DE3)]
gi|254591525|gb|ACT70886.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|257752866|dbj|BAI24368.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257758322|dbj|BAI29819.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257763454|dbj|BAI34949.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260449928|gb|ACX40350.1| protein of unknown function DUF882 [Escherichia coli DH1]
gi|281178057|dbj|BAI54387.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920777|emb|CBG33840.1| putative exported protein [Escherichia coli 042]
gi|290761800|gb|ADD55761.1| hypothetical protein G2583_1161 [Escherichia coli O55:H7 str.
CB9615]
gi|291324042|gb|EFE63464.1| ycbK protein [Escherichia coli B088]
gi|291428816|gb|EFF01841.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|291434264|gb|EFF07237.1| ycbK protein [Escherichia coli B185]
gi|291469771|gb|EFF12255.1| conserved hypothetical protein [Escherichia coli B354]
gi|294490812|gb|ADE89568.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
IHE3034]
gi|298279709|gb|EFI21217.1| ycbK protein [Escherichia coli FVEC1302]
gi|299881261|gb|EFI89472.1| Tat pathway signal sequence [Escherichia coli MS 196-1]
gi|300300305|gb|EFJ56690.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1]
gi|300306991|gb|EFJ61511.1| Tat pathway signal sequence [Escherichia coli MS 200-1]
gi|300317649|gb|EFJ67433.1| Tat pathway signal sequence [Escherichia coli MS 175-1]
gi|300354937|gb|EFJ70807.1| Tat pathway signal sequence protein [Escherichia coli MS 198-1]
gi|300397254|gb|EFJ80792.1| Tat pathway signal sequence protein [Escherichia coli MS 69-1]
gi|300405057|gb|EFJ88595.1| Tat pathway signal sequence protein [Escherichia coli MS 84-1]
gi|300409657|gb|EFJ93195.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1]
gi|300412027|gb|EFJ95337.1| Tat pathway signal sequence [Escherichia coli MS 115-1]
gi|300418466|gb|EFK01777.1| Tat pathway signal sequence protein [Escherichia coli MS 182-1]
gi|300450892|gb|EFK14512.1| Tat pathway signal sequence [Escherichia coli MS 116-1]
gi|300457236|gb|EFK20729.1| Tat pathway signal sequence protein [Escherichia coli MS 21-1]
gi|300462458|gb|EFK25951.1| Tat pathway signal sequence protein [Escherichia coli MS 187-1]
gi|300523866|gb|EFK44935.1| Tat pathway signal sequence protein [Escherichia coli MS 119-7]
gi|300842303|gb|EFK70063.1| Tat pathway signal sequence protein [Escherichia coli MS 124-1]
gi|300846685|gb|EFK74445.1| Tat pathway signal sequence [Escherichia coli MS 78-1]
gi|301078160|gb|EFK92966.1| Tat pathway signal sequence protein [Escherichia coli MS 146-1]
gi|305853384|gb|EFM53823.1| hypothetical protein ECNC101_11932 [Escherichia coli NC101]
gi|306908242|gb|EFN38741.1| protein of unknown function DUF882 [Escherichia coli W]
gi|307552765|gb|ADN45540.1| putative exported protein YcbK [Escherichia coli ABU 83972]
gi|307627647|gb|ADN71951.1| hypothetical protein UM146_12920 [Escherichia coli UM146]
gi|308121392|gb|EFO58654.1| Tat pathway signal sequence [Escherichia coli MS 145-7]
gi|308924198|gb|EFP69695.1| twin-arginine translocation pathway signal sequence domain protein
[Shigella dysenteriae 1617]
gi|309701202|emb|CBJ00502.1| putative exported protein [Escherichia coli ETEC H10407]
gi|310336817|gb|EFQ01984.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 1827-70]
gi|312286410|gb|EFR14323.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 2362-75]
gi|312945446|gb|ADR26273.1| hypothetical protein NRG857_04225 [Escherichia coli O83:H1 str. NRG
857C]
gi|313650832|gb|EFS15233.1| twin-arginine translocation pathway signal sequence domain protein
[Shigella flexneri 2a str. 2457T]
gi|315060211|gb|ADT74538.1| conserved hypothetical protein [Escherichia coli W]
gi|315135574|dbj|BAJ42733.1| hypothetical protein ECDH1ME8569_0877 [Escherichia coli DH1]
gi|315257967|gb|EFU37935.1| Tat pathway signal sequence [Escherichia coli MS 85-1]
gi|315287547|gb|EFU46953.1| Tat pathway signal sequence [Escherichia coli MS 110-3]
gi|315291224|gb|EFU50584.1| Tat pathway signal sequence [Escherichia coli MS 153-1]
gi|315296217|gb|EFU55524.1| Tat pathway signal sequence [Escherichia coli MS 16-3]
gi|315619120|gb|EFU99700.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 3431]
gi|320183825|gb|EFW58658.1| hypothetical protein SGF_03997 [Shigella flexneri CDC 796-83]
gi|320192588|gb|EFW67229.1| hypothetical protein ECoD_00515 [Escherichia coli O157:H7 str.
EC1212]
gi|320196579|gb|EFW71202.1| hypothetical protein EcoM_01120 [Escherichia coli WV_060327]
gi|320202322|gb|EFW76893.1| hypothetical protein ECoL_00368 [Escherichia coli EC4100B]
gi|320637794|gb|EFX07586.1| hypothetical protein ECO5101_23355 [Escherichia coli O157:H7 str.
G5101]
gi|320642919|gb|EFX12120.1| hypothetical protein ECO9389_03106 [Escherichia coli O157:H- str.
493-89]
gi|320648376|gb|EFX17031.1| hypothetical protein ECO2687_19216 [Escherichia coli O157:H- str. H
2687]
gi|320653692|gb|EFX21766.1| hypothetical protein ECO7815_15543 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659837|gb|EFX27393.1| hypothetical protein ECO5905_25053 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664306|gb|EFX31457.1| hypothetical protein ECOSU61_01708 [Escherichia coli O157:H7 str.
LSU-61]
gi|323157187|gb|EFZ43310.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli EPECa14]
gi|323159553|gb|EFZ45533.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli E128010]
gi|323165399|gb|EFZ51186.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella sonnei 53G]
gi|323174973|gb|EFZ60588.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli LT-68]
gi|323175451|gb|EFZ61046.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli 1180]
gi|323185368|gb|EFZ70732.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli 1357]
gi|323190746|gb|EFZ76015.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli RN587/1]
gi|323379229|gb|ADX51497.1| protein of unknown function DUF882 [Escherichia coli KO11]
gi|323938032|gb|EGB34294.1| peptidase M15 [Escherichia coli E1520]
gi|323942842|gb|EGB39007.1| peptidase M15 [Escherichia coli E482]
gi|323947285|gb|EGB43293.1| peptidase M15 [Escherichia coli H120]
gi|323953366|gb|EGB49232.1| peptidase M15 [Escherichia coli H252]
gi|323958231|gb|EGB53940.1| peptidase M15 [Escherichia coli H263]
gi|323962918|gb|EGB58492.1| peptidase M15 [Escherichia coli H489]
gi|323967173|gb|EGB62597.1| peptidase M15 [Escherichia coli M863]
gi|323973199|gb|EGB68391.1| peptidase M15 [Escherichia coli TA007]
gi|323976687|gb|EGB71775.1| peptidase M15 [Escherichia coli TW10509]
gi|324009853|gb|EGB79072.1| Tat pathway signal sequence [Escherichia coli MS 57-2]
gi|324012953|gb|EGB82172.1| Tat pathway signal sequence [Escherichia coli MS 60-1]
gi|324019065|gb|EGB88284.1| Tat pathway signal sequence [Escherichia coli MS 117-3]
gi|324117209|gb|EGC11117.1| peptidase M15 [Escherichia coli E1167]
gi|326338179|gb|EGD62008.1| hypothetical protein ECF_05130 [Escherichia coli O157:H7 str. 1125]
gi|326346156|gb|EGD69894.1| hypothetical protein ECoA_01409 [Escherichia coli O157:H7 str.
1044]
gi|327253716|gb|EGE65345.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli STEC_7v]
gi|330910706|gb|EGH39216.1| exported protein [Escherichia coli AA86]
gi|331038250|gb|EGI10470.1| putative outer membrane protein [Escherichia coli H736]
gi|331044943|gb|EGI17070.1| putative outer membrane protein [Escherichia coli M605]
gi|331050224|gb|EGI22282.1| putative outer membrane protein [Escherichia coli M718]
gi|331055245|gb|EGI27254.1| putative outer membrane protein [Escherichia coli TA206]
gi|331060762|gb|EGI32726.1| putative outer membrane protein [Escherichia coli TA143]
gi|331065660|gb|EGI37553.1| putative outer membrane protein [Escherichia coli TA271]
gi|331070368|gb|EGI41733.1| putative outer membrane protein [Escherichia coli TA280]
gi|331075403|gb|EGI46701.1| putative outer membrane protein [Escherichia coli H591]
gi|331080066|gb|EGI51245.1| putative outer membrane protein [Escherichia coli H299]
gi|332093380|gb|EGI98438.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella boydii 3594-74]
gi|332104521|gb|EGJ07867.1| conserved hypothetical protein [Shigella sp. D9]
gi|332342368|gb|AEE55702.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332759014|gb|EGJ89324.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri 4343-70]
gi|332760125|gb|EGJ90423.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri 2747-71]
gi|332762698|gb|EGJ92961.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-671]
gi|332767713|gb|EGJ97904.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri 2930-71]
gi|333001240|gb|EGK20808.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri VA-6]
gi|333006314|gb|EGK25823.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-218]
gi|333008912|gb|EGK28372.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-272]
gi|333020027|gb|EGK39298.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-304]
gi|333020222|gb|EGK39492.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-227]
Length = 182
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|304397086|ref|ZP_07378965.1| protein of unknown function DUF882 [Pantoea sp. aB]
gi|304355235|gb|EFM19603.1| protein of unknown function DUF882 [Pantoea sp. aB]
Length = 182
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y+++ LS+LN D+ + + +DP LFD
Sbjct: 32 LSTSRPRVLMLNNLHTGETLKTEFFNGKSYDKDELSRLNHFFRDYRANKVKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + + I ++SGYR+ TN ML +A+ S H G+A+DF+I GVSL ++
Sbjct: 92 IFRLQALLGMRKPIQLVSGYRSLATNNMLRESGPGVAKHSYHTKGQAMDFHIEGVSLANV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPIRHW 182
>gi|114320194|ref|YP_741877.1| hypothetical protein Mlg_1034 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226588|gb|ABI56387.1| protein of unknown function DUF882 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 186
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R L + + TG K VT+ +Y + LS++N +L D + + +DP L D L +
Sbjct: 40 EHRDLAFHNLHTGEKLTVTYWEHGRYLPDALSEVNHVLRDHRANEVHPIDPDLLDTLDAL 99
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
QQ ++SGYR+ ETN+ L + R +A S H+ G+A+D +PG L + A
Sbjct: 100 QQRLDTQATFEVISGYRSPETNRRLRAQGRNVAVYSLHMEGEAIDIRVPGRDLSQVRDAA 159
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ L++GGVGYY S+F+H+DVG VRSW
Sbjct: 160 LSLQKGGVGYYPRSQFVHVDVGNVRSW 186
>gi|15800787|ref|NP_286801.1| hypothetical protein Z1273 [Escherichia coli O157:H7 EDL933]
gi|25367864|pir||G85618 hypothetical protein ycbK [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12514098|gb|AAG55411.1|AE005282_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 182
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|121592584|ref|YP_984480.1| hypothetical protein Ajs_0149 [Acidovorax sp. JS42]
gi|120604664|gb|ABM40404.1| protein of unknown function DUF882 [Acidovorax sp. JS42]
Length = 190
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
+Q+ R L + T + + + +G Q+ L LN L D +S MDP LF L
Sbjct: 40 EQDLARRLAFNHLHTHERLALVYAQGEQFVPAALPTLNHFLRDHYSGDVGVMDPDLFHLL 99
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++Q ++SGYR+ TN+ L + R +AR+S H+ GKA+D +PGVSL L
Sbjct: 100 HRVRQTLQTQRPFEVISGYRSPHTNETLRTTRGGGVARRSLHMDGKAIDVRLPGVSLSDL 159
Query: 171 YKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
AI L+ GGVGYY++ F+HID GRVRSW
Sbjct: 160 RDAAISLRAGGVGYYAREQFVHIDTGRVRSW 190
>gi|330830684|ref|YP_004393636.1| Nonpeptidase [Aeromonas veronii B565]
gi|328805820|gb|AEB51019.1| Nonpeptidase [Aeromonas veronii B565]
Length = 181
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG + ++ Y +GL++LN + D+ + ++D +LFD L+ +Q
Sbjct: 37 RELSFFNLNTGERVRASYWENGHYLSDGLAELNHIFRDYRRNEVFNIDKKLFDQLFLLQH 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I ++SGYR TN+ ++R +A+ S H LG+AVD IPGV L L K A++
Sbjct: 97 KLGRRSEIQLISGYRAPATNRQKRHKSRGVAKHSYHTLGQAVDVRIPGVQLAHLRKAALQ 156
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY + F+H+D G VRSW
Sbjct: 157 LKVGGVGYYPRDNFVHLDTGPVRSW 181
>gi|269102897|ref|ZP_06155594.1| hypothetical outer membrane protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162795|gb|EEZ41291.1| hypothetical outer membrane protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 185
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ RT+ + + TG + G Y L ++N L D+ ++ MD +LFD +
Sbjct: 36 KDPRTISLCNIHTGENLETEYYNGRGYIYSELKRMNHLCRDFRQNEATRMDKRLFDTIAH 95
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ I+SGYR+ TNKML+RR+ +A+KS H+ G+A+DF + G+ L + ++
Sbjct: 96 IQDVLGHKGQAQIISGYRSPATNKMLARRSGGVAKKSYHMTGQAIDFNLEGIPLSKVRRV 155
Query: 174 AIRLKRGGVGYYSK--FLHIDVGRVRSW 199
A+ L GGVGYY K F+HID G VR W
Sbjct: 156 AMELNIGGVGYYPKSGFVHIDTGPVRQW 183
>gi|212709810|ref|ZP_03317938.1| hypothetical protein PROVALCAL_00858 [Providencia alcalifaciens DSM
30120]
gi|212687621|gb|EEB47149.1| hypothetical protein PROVALCAL_00858 [Providencia alcalifaciens DSM
30120]
Length = 182
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 7/165 (4%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
L+ H ++MS+ R L+ ++TG F G +YN+ L++LN L D+
Sbjct: 23 LLPNHVLAAMST-----PRPRILRFQNLNTGEFLKTEFFDGRRYNKSELARLNHLFRDYR 77
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ +DP+LFD ++ +Q + + ++SGYR+ +TN L R++ +A++S H G+
Sbjct: 78 CDKVKTIDPKLFDQIYLLQMMMGTNKPVQLISGYRSLQTNNELRRKSSGVAKQSYHTRGQ 137
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
A+DF+I G+ L ++ K A+++ GGVGYY K F+HID G VR+W
Sbjct: 138 AMDFHIEGLQLSNVRKAALKMGAGGVGYYPKSNFIHIDTGPVRTW 182
>gi|37525683|ref|NP_929027.1| hypothetical protein plu1748 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785111|emb|CAE14041.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 182
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L+ + TG F G +YN+E L++L+ L D+ +DP+LFD ++ +Q
Sbjct: 38 RILRFDNLHTGETIKAEFFDGYRYNKEELARLDHLFRDYRQNSVKTIDPKLFDQIYLLQM 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + + ++SGYR+ TN L ++++ +A++S H G+A+DF+I G+ L + K A++
Sbjct: 98 MIEINKPVQLISGYRSLVTNNQLRKQSKGVAKQSYHTRGRAMDFHIEGIELSRICKAALK 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+K GGVGYY S F+HID G VR+W
Sbjct: 158 MKAGGVGYYPHSNFVHIDTGPVRTW 182
>gi|22126640|ref|NP_670063.1| hypothetical protein y2762 [Yersinia pestis KIM 10]
gi|45441012|ref|NP_992551.1| hypothetical protein YP_1185 [Yersinia pestis biovar Microtus str.
91001]
gi|51595772|ref|YP_069963.1| hypothetical protein YPTB1432 [Yersinia pseudotuberculosis IP
32953]
gi|108806699|ref|YP_650615.1| hypothetical protein YPA_0702 [Yersinia pestis Antiqua]
gi|108812730|ref|YP_648497.1| hypothetical protein YPN_2569 [Yersinia pestis Nepal516]
gi|145599559|ref|YP_001163635.1| hypothetical protein YPDSF_2287 [Yersinia pestis Pestoides F]
gi|149366665|ref|ZP_01888699.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153950542|ref|YP_001401527.1| hypothetical protein YpsIP31758_2562 [Yersinia pseudotuberculosis
IP 31758]
gi|162420348|ref|YP_001606447.1| hypothetical protein YpAngola_A1974 [Yersinia pestis Angola]
gi|165924690|ref|ZP_02220522.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938975|ref|ZP_02227528.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009917|ref|ZP_02230815.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211283|ref|ZP_02237318.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399792|ref|ZP_02305310.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419539|ref|ZP_02311292.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424065|ref|ZP_02315818.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170024878|ref|YP_001721383.1| hypothetical protein YPK_2653 [Yersinia pseudotuberculosis YPIII]
gi|186894851|ref|YP_001871963.1| hypothetical protein YPTS_1534 [Yersinia pseudotuberculosis PB1/+]
gi|218928556|ref|YP_002346431.1| hypothetical protein YPO1408 [Yersinia pestis CO92]
gi|229841380|ref|ZP_04461539.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843485|ref|ZP_04463631.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229895859|ref|ZP_04511029.1| conserved protein [Yersinia pestis Pestoides A]
gi|229903135|ref|ZP_04518248.1| conserved protein [Yersinia pestis Nepal516]
gi|270486928|ref|ZP_06204002.1| Tat (twin-arginine translocation) pathway signal sequence [Yersinia
pestis KIM D27]
gi|294503395|ref|YP_003567457.1| hypothetical protein YPZ3_1285 [Yersinia pestis Z176003]
gi|21959652|gb|AAM86314.1|AE013879_4 hypothetical protein y2762 [Yersinia pestis KIM 10]
gi|45435871|gb|AAS61428.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589054|emb|CAH20672.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108776378|gb|ABG18897.1| hypothetical protein YPN_2569 [Yersinia pestis Nepal516]
gi|108778612|gb|ABG12670.1| hypothetical protein YPA_0702 [Yersinia pestis Antiqua]
gi|115347167|emb|CAL20060.1| putative exported protein [Yersinia pestis CO92]
gi|145211255|gb|ABP40662.1| hypothetical protein YPDSF_2287 [Yersinia pestis Pestoides F]
gi|149291039|gb|EDM41114.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152962037|gb|ABS49498.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162353163|gb|ABX87111.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165913122|gb|EDR31746.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923750|gb|EDR40882.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991313|gb|EDR43614.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207054|gb|EDR51534.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962280|gb|EDR58301.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050500|gb|EDR61908.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056914|gb|EDR66677.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169751412|gb|ACA68930.1| protein of unknown function DUF882 [Yersinia pseudotuberculosis
YPIII]
gi|186697877|gb|ACC88506.1| protein of unknown function DUF882 [Yersinia pseudotuberculosis
PB1/+]
gi|229678905|gb|EEO75008.1| conserved protein [Yersinia pestis Nepal516]
gi|229689832|gb|EEO81893.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229697746|gb|EEO87793.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700782|gb|EEO88811.1| conserved protein [Yersinia pestis Pestoides A]
gi|262361437|gb|ACY58158.1| hypothetical protein YPD4_1250 [Yersinia pestis D106004]
gi|262365028|gb|ACY61585.1| hypothetical protein YPD8_0897 [Yersinia pestis D182038]
gi|270335432|gb|EFA46209.1| Tat (twin-arginine translocation) pathway signal sequence [Yersinia
pestis KIM D27]
gi|294353854|gb|ADE64195.1| hypothetical protein YPZ3_1285 [Yersinia pestis Z176003]
gi|320015730|gb|ADV99301.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 182
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G YN++ LS+LN + D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHIFRDYRANKVKKIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN L +R +A++S H G+A+DF+I G+ L +
Sbjct: 92 LYRLQVLLETTKPVQLISGYRSLGTNNELREHSRGVAKQSYHTKGQAMDFHIEGIQLSYI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 RKAALKMRAGGVGYYPRSNFVHIDTGPTRAW 182
>gi|308186272|ref|YP_003930403.1| hypothetical protein Pvag_0752 [Pantoea vagans C9-1]
gi|308056782|gb|ADO08954.1| Uncharacterized protein ycbK [Pantoea vagans C9-1]
Length = 182
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y+++ LS+LN D+ + + +DP LFD
Sbjct: 32 LSTSRPRVLMLNNLHTGETLKTEFFNGKSYDKDELSRLNHFFRDYRANKVKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + + I ++SGYR+ TN ML +A+ S H G+A+DF+I G+SL ++
Sbjct: 92 IFRLQALLGMRKPIQLVSGYRSLATNNMLRESGPGVAKHSYHTKGQAMDFHIEGISLANV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPIRHW 182
>gi|261339260|ref|ZP_05967118.1| hypothetical protein ENTCAN_05496 [Enterobacter cancerogenus ATCC
35316]
gi|288319117|gb|EFC58055.1| putative peptidase M15 family protein [Enterobacter cancerogenus
ATCC 35316]
Length = 183
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELAKLNHFFRDFRANKIKAIDPGLFDQ 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + ++SGYR+ +TN L +R +A+KS H G+A+DF+I GVSL ++
Sbjct: 93 LFRLQGLLGTSRPVQLISGYRSLDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGVSLANI 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 153 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|238920325|ref|YP_002933840.1| hypothetical protein NT01EI_2435 [Edwardsiella ictaluri 93-146]
gi|238869894|gb|ACR69605.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 182
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L ++TG + F G Y E L++LN D+ + +DP+LFD
Sbjct: 32 LSTPRPRVLVFNNLNTGERLRAEFFDGRAYIPEELARLNHFFRDYRANLVKRIDPRLFDH 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + I ++SGYR+ TN L R+R +A++S H G+A+DF+I GV+L ++
Sbjct: 92 IFRLQVMLGSKKPIQLVSGYRSPHTNSELRGRSRGVAKQSFHTKGQAMDFHIDGVTLANV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+R++ GGVGYY S F+HID G VRSW
Sbjct: 152 RKAAMRMRVGGVGYYPRSNFVHIDTGPVRSW 182
>gi|188025799|ref|ZP_02959871.2| hypothetical protein PROSTU_01770 [Providencia stuartii ATCC 25827]
gi|188020554|gb|EDU58594.1| hypothetical protein PROSTU_01770 [Providencia stuartii ATCC 25827]
Length = 193
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
+ L+ ++TG F G YN+ L++LN L D+ + +DP+LFD ++ +Q
Sbjct: 49 KILRFQNLNTGEFLKTEFFDGRHYNKSELARLNHLFRDYRCDKVKTIDPKLFDQIYMLQV 108
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I ++SGYR+ ETN L R + +A+KS H G+A+DF+I G+ L + K A++
Sbjct: 109 MLGSNKPIQLISGYRSLETNNALRRSSSGVAKKSYHTRGQAMDFHIEGIQLSHIRKAALK 168
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
++ GGVGYY K F+HID G R+W
Sbjct: 169 MRAGGVGYYPKSNFIHIDTGPARTW 193
>gi|120598923|ref|YP_963497.1| hypothetical protein Sputw3181_2115 [Shewanella sp. W3-18-1]
gi|146292991|ref|YP_001183415.1| hypothetical protein Sputcn32_1893 [Shewanella putrefaciens CN-32]
gi|120559016|gb|ABM24943.1| protein of unknown function DUF882 [Shewanella sp. W3-18-1]
gi|145564681|gb|ABP75616.1| protein of unknown function DUF882 [Shewanella putrefaciens CN-32]
Length = 182
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R L +Y TG + ++ Y E L+ ++LL D + MD +LFD L+ ++
Sbjct: 37 IRELSLYNRHTGERNDGSYWVDGHYQSEVLADFSQLLRDHRQNIAAPMDKRLFDLLYSLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+V + I+++SGYR+ +TN ML+ + +A+KS H+ G A+D IP V+L++L A+
Sbjct: 97 TTLNVDDEIHVISGYRSPKTNGMLANNSGGVAKKSYHMQGMAMDIAIPSVNLKTLRDAAL 156
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY K F+H+D G VR W
Sbjct: 157 SLKLGGVGYYPKSGFVHVDCGPVRRW 182
>gi|319426479|gb|ADV54553.1| protein of unknown function DUF882 [Shewanella putrefaciens 200]
Length = 192
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R L +Y TG + ++ Y E L+ ++LL D + MD +LFD L+ ++
Sbjct: 47 IRELSLYNRHTGERNDGSYWVDGHYQSEVLADFSQLLRDHRQNIAAPMDKRLFDLLYSLK 106
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+V + I+++SGYR+ +TN ML+ + +A+KS H+ G A+D IP V+L++L A+
Sbjct: 107 TTLNVDDEIHVISGYRSPKTNGMLANNSGGVAKKSYHMQGMAMDIAIPSVNLKTLRDAAL 166
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY K F+H+D G VR W
Sbjct: 167 SLKLGGVGYYPKSGFVHVDCGPVRRW 192
>gi|197106127|ref|YP_002131504.1| Twin-arginine translocation pathway signal [Phenylobacterium
zucineum HLK1]
gi|196479547|gb|ACG79075.1| Twin-arginine translocation pathway signal [Phenylobacterium
zucineum HLK1]
Length = 188
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
Query: 72 VTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYR 131
V F+ G +Y + L++ ++L DW + + MDP L+D L I I+SGYR
Sbjct: 57 VYFENG-RYLPDALAEAQKVLRDWRTGEETFMDPGLYDALHAISNKLETRAPFQIISGYR 115
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFL 189
+ +TN ML +++ +A KSQH LGKAVD + GV L L+K A+ + GGVGYY S F+
Sbjct: 116 SPKTNAMLHAKSKGVASKSQHTLGKAVDVRMNGVELAHLHKAALAVGAGGVGYYPVSGFV 175
Query: 190 HIDVGRVRSW 199
H+D GRVR W
Sbjct: 176 HVDTGRVRQW 185
>gi|161503875|ref|YP_001570987.1| hypothetical protein SARI_01964 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865222|gb|ABX21845.1| hypothetical protein SARI_01964 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 182
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+K A+ + GGVGYY S F+HID G R W
Sbjct: 152 HKAALSMGAGGVGYYPRSNFVHIDTGPARHW 182
>gi|117619408|ref|YP_855764.1| M15 family non-peptidase protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560815|gb|ABK37763.1| nonpeptidase homolog, peptidase M15 family [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 181
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG + ++ +Y ++GL++LN + D+ + ++D +LFD L+ +Q
Sbjct: 37 RELSFFNLNTGERVRASYWEDGRYLKDGLAELNHIFRDYRRNEVFNIDRKLFDQLYLLQH 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I ++SGYR+ TN+ R+R +A+ S H LG+AVD IPGV L L K A+
Sbjct: 97 KLGRHGEIQLISGYRSPVTNRQKRSRSRAVAKHSYHTLGQAVDVRIPGVQLAHLRKAALH 156
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY F+H+D G VRSW
Sbjct: 157 LKVGGVGYYPSDNFVHLDTGPVRSW 181
>gi|237730889|ref|ZP_04561370.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|283833783|ref|ZP_06353524.1| nonpeptidase, peptidase M15 family [Citrobacter youngae ATCC 29220]
gi|226906428|gb|EEH92346.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|291070448|gb|EFE08557.1| nonpeptidase, peptidase M15 family [Citrobacter youngae ATCC 29220]
Length = 182
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFRDFRANKVKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LFRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPSSNFVHIDTGPARHW 182
>gi|283784753|ref|YP_003364618.1| hypothetical protein ROD_09951 [Citrobacter rodentium ICC168]
gi|282948207|emb|CBG87774.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 182
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGETIKAEFFDGRAYIQDELAKLNHFFRDYRANKVKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + ++SGYR+ +TN L +R +A+KS H G+A+DF+I GVSL +
Sbjct: 92 LFRLQGLLGTRRPVQLISGYRSLDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGVSLSHI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 182
>gi|16759865|ref|NP_455482.1| hypothetical protein STY0998 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142362|ref|NP_805704.1| hypothetical protein t1938 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62179523|ref|YP_215940.1| hypothetical protein SC0953 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|213160797|ref|ZP_03346507.1| hypothetical protein Salmoneentericaenterica_12363 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424611|ref|ZP_03357394.1| hypothetical protein SentesTyphi_02371 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581708|ref|ZP_03363534.1| hypothetical protein SentesTyph_11079 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213620686|ref|ZP_03373469.1| hypothetical protein SentesTyp_25622 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650527|ref|ZP_03380580.1| hypothetical protein SentesTy_26788 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852479|ref|ZP_03382011.1| hypothetical protein SentesT_06139 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224582806|ref|YP_002636604.1| hypothetical protein SPC_0997 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|25367867|pir||AB0616 probable exported protein STY0998 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502158|emb|CAD05396.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137992|gb|AAO69553.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62127156|gb|AAX64859.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224467333|gb|ACN45163.1| hypothetical protein SPC_0997 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713991|gb|EFZ05562.1| Hedgehog/DD-peptidase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 182
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|311280160|ref|YP_003942391.1| hypothetical protein Entcl_2859 [Enterobacter cloacae SCF1]
gi|308749355|gb|ADO49107.1| protein of unknown function DUF882 [Enterobacter cloacae SCF1]
Length = 235
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 85 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFRDFRANKIKSIDPKLFDQ 144
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G+SL ++
Sbjct: 145 LYRLQGLLGTNKPVQLVSGYRSLDTNNELRERSRGVAKHSYHTKGQAMDFHIEGISLSNV 204
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 205 RKAALSMRAGGVGYYPSSNFVHIDTGPTRHW 235
>gi|161614765|ref|YP_001588730.1| hypothetical protein SPAB_02517 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364129|gb|ABX67897.1| hypothetical protein SPAB_02517 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 182
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|16764356|ref|NP_459971.1| outer membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56413955|ref|YP_151030.1| hypothetical protein SPA1802 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|167994947|ref|ZP_02576037.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168233417|ref|ZP_02658475.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237101|ref|ZP_02662159.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168243765|ref|ZP_02668697.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168264664|ref|ZP_02686637.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168466591|ref|ZP_02700453.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168822071|ref|ZP_02834071.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194444467|ref|YP_002040194.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194447346|ref|YP_002044988.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194471071|ref|ZP_03077055.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194734847|ref|YP_002114049.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251656|ref|YP_002145914.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264289|ref|ZP_03164363.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197362878|ref|YP_002142515.1| hypothetical protein SSPA1675 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245161|ref|YP_002214920.1| hypothetical protein SeD_A1061 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389976|ref|ZP_03216587.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204929901|ref|ZP_03220922.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205352203|ref|YP_002226004.1| hypothetical protein SG0938 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856387|ref|YP_002243038.1| hypothetical protein SEN0900 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238913231|ref|ZP_04657068.1| hypothetical protein SentesTe_19199 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16419509|gb|AAL19930.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56128212|gb|AAV77718.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194403130|gb|ACF63352.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194405650|gb|ACF65869.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194457435|gb|EDX46274.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194710349|gb|ACF89570.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195630897|gb|EDX49483.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197094355|emb|CAR59867.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197215359|gb|ACH52756.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242544|gb|EDY25164.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197289742|gb|EDY29103.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197939677|gb|ACH77010.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199602421|gb|EDZ00967.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204320895|gb|EDZ06096.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205271984|emb|CAR36828.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205327273|gb|EDZ14037.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205332484|gb|EDZ19248.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205337217|gb|EDZ23981.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205341540|gb|EDZ28304.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205346911|gb|EDZ33542.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206708190|emb|CAR32483.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246212|emb|CBG24016.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992735|gb|ACY87620.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157539|emb|CBW17029.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911982|dbj|BAJ35956.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085239|emb|CBY95024.1| Uncharacterized protein ycbK Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223320|gb|EFX48389.1| exported protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322616426|gb|EFY13335.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619676|gb|EFY16551.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322622628|gb|EFY19473.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322629777|gb|EFY26552.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632501|gb|EFY29247.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322637004|gb|EFY33707.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322641457|gb|EFY38095.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322646077|gb|EFY42593.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322654078|gb|EFY50401.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658610|gb|EFY54872.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322663467|gb|EFY59669.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322670203|gb|EFY66343.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322671439|gb|EFY67561.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322676795|gb|EFY72862.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322682719|gb|EFY78738.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322686399|gb|EFY82381.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323129261|gb|ADX16691.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195922|gb|EFZ81089.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323199790|gb|EFZ84879.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323202783|gb|EFZ87819.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323209054|gb|EFZ93991.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323209977|gb|EFZ94884.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323217986|gb|EGA02701.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323219020|gb|EGA03527.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323226591|gb|EGA10796.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323229787|gb|EGA13910.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323233012|gb|EGA17108.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323240747|gb|EGA24789.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243063|gb|EGA27084.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249774|gb|EGA33676.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323252753|gb|EGA36591.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323259167|gb|EGA42811.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259990|gb|EGA43618.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323268009|gb|EGA51488.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323269857|gb|EGA53306.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326622673|gb|EGE29018.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326627247|gb|EGE33590.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332987887|gb|AEF06870.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 182
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|167553002|ref|ZP_02346752.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205322498|gb|EDZ10337.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 182
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|157146383|ref|YP_001453702.1| hypothetical protein CKO_02142 [Citrobacter koseri ATCC BAA-895]
gi|157083588|gb|ABV13266.1| hypothetical protein CKO_02142 [Citrobacter koseri ATCC BAA-895]
Length = 182
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDFRANKVKAIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L +R +A+KS H G+A+DF+I GVSL ++
Sbjct: 92 LFRLQGLLGTRKPVQLISGYRSLDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGVSLSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|289812173|ref|ZP_06542802.1| hypothetical protein Salmonellaentericaenterica_50997 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 180
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 30 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 89
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++
Sbjct: 90 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNI 149
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 150 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 180
>gi|156934582|ref|YP_001438498.1| hypothetical protein ESA_02416 [Cronobacter sakazakii ATCC BAA-894]
gi|156532836|gb|ABU77662.1| hypothetical protein ESA_02416 [Cronobacter sakazakii ATCC BAA-894]
Length = 211
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 61 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFRDYRANKVKAIDPRLFDQ 120
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L ++R +A+ S H G+A+DF+I G+SL ++
Sbjct: 121 LFRLQGLLGTRKPVQLISGYRSVDTNNELRSKSRGVAKHSYHTKGQAMDFHIEGISLSNI 180
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 181 RKAALSLRAGGVGYYPSSNFVHIDTGPLRHW 211
>gi|15641282|ref|NP_230914.1| hypothetical protein VC1269 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121729967|ref|ZP_01682386.1| lipoprotein, putative [Vibrio cholerae V52]
gi|147673878|ref|YP_001216834.1| putative lipoprotein [Vibrio cholerae O395]
gi|153212294|ref|ZP_01948082.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|153801331|ref|ZP_01955917.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|153823869|ref|ZP_01976536.1| lipoprotein, putative [Vibrio cholerae B33]
gi|153827564|ref|ZP_01980231.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|153829584|ref|ZP_01982251.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|227081441|ref|YP_002809992.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|229505144|ref|ZP_04394654.1| hypothetical protein VCF_000352 [Vibrio cholerae BX 330286]
gi|229511184|ref|ZP_04400663.1| hypothetical protein VCE_002591 [Vibrio cholerae B33]
gi|229515644|ref|ZP_04405103.1| hypothetical protein VCB_003302 [Vibrio cholerae TMA 21]
gi|229518303|ref|ZP_04407747.1| hypothetical protein VCC_002327 [Vibrio cholerae RC9]
gi|229525868|ref|ZP_04415273.1| hypothetical protein VCA_003513 [Vibrio cholerae bv. albensis
VL426]
gi|229529650|ref|ZP_04419040.1| hypothetical protein VCG_002745 [Vibrio cholerae 12129(1)]
gi|229608164|ref|YP_002878812.1| hypothetical protein VCD_003082 [Vibrio cholerae MJ-1236]
gi|254226413|ref|ZP_04920000.1| lipoprotein, putative [Vibrio cholerae V51]
gi|254848393|ref|ZP_05237743.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745665|ref|ZP_05419613.1| hypothetical protein VCH_002024 [Vibrio cholera CIRS 101]
gi|262159058|ref|ZP_06030170.1| hypothetical protein VIG_002299 [Vibrio cholerae INDRE 91/1]
gi|262169417|ref|ZP_06037109.1| hypothetical protein VIJ_002643 [Vibrio cholerae RC27]
gi|297578861|ref|ZP_06940789.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498639|ref|ZP_07008446.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9655754|gb|AAF94428.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121628288|gb|EAX60799.1| lipoprotein, putative [Vibrio cholerae V52]
gi|124116672|gb|EAY35492.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|124123156|gb|EAY41899.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|125621035|gb|EAZ49382.1| lipoprotein, putative [Vibrio cholerae V51]
gi|126518611|gb|EAZ75834.1| lipoprotein, putative [Vibrio cholerae B33]
gi|146315761|gb|ABQ20300.1| putative lipoprotein [Vibrio cholerae O395]
gi|148874918|gb|EDL73053.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|149738463|gb|EDM52859.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|227009329|gb|ACP05541.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|227013186|gb|ACP09396.1| putative lipoprotein [Vibrio cholerae O395]
gi|229333424|gb|EEN98910.1| hypothetical protein VCG_002745 [Vibrio cholerae 12129(1)]
gi|229339449|gb|EEO04466.1| hypothetical protein VCA_003513 [Vibrio cholerae bv. albensis
VL426]
gi|229345018|gb|EEO09992.1| hypothetical protein VCC_002327 [Vibrio cholerae RC9]
gi|229347413|gb|EEO12373.1| hypothetical protein VCB_003302 [Vibrio cholerae TMA 21]
gi|229351149|gb|EEO16090.1| hypothetical protein VCE_002591 [Vibrio cholerae B33]
gi|229357367|gb|EEO22284.1| hypothetical protein VCF_000352 [Vibrio cholerae BX 330286]
gi|229370819|gb|ACQ61242.1| hypothetical protein VCD_003082 [Vibrio cholerae MJ-1236]
gi|254844098|gb|EET22512.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255736740|gb|EET92137.1| hypothetical protein VCH_002024 [Vibrio cholera CIRS 101]
gi|262022230|gb|EEY40939.1| hypothetical protein VIJ_002643 [Vibrio cholerae RC27]
gi|262029243|gb|EEY47895.1| hypothetical protein VIG_002299 [Vibrio cholerae INDRE 91/1]
gi|297536455|gb|EFH75288.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542972|gb|EFH79022.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327483957|gb|AEA78364.1| exported protein [Vibrio cholerae LMA3894-4]
Length = 182
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG + G Y + L +LN L D+ + MD LFD L +IQ
Sbjct: 35 RELALSNLHTGESIETRYFNGKNYVRSELKRLNHLCRDFRRDEVHAMDKLLFDQLCQIQL 94
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI
Sbjct: 95 LLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAIS 154
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S+F+HID G VR W
Sbjct: 155 LQAGGVGYYPKSQFIHIDTGPVRQW 179
>gi|254291720|ref|ZP_04962507.1| lipoprotein, putative [Vibrio cholerae AM-19226]
gi|150422404|gb|EDN14364.1| lipoprotein, putative [Vibrio cholerae AM-19226]
Length = 182
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG + G Y + L +LN L D+ + MD LFD L +IQ
Sbjct: 35 RELALSNLHTGESIETRYFNGKNYVRSELKRLNHLCRDFRRDEVHAMDKLLFDQLCQIQL 94
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI
Sbjct: 95 LLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAIS 154
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S+F+HID G VR W
Sbjct: 155 LQAGGVGYYPKSQFIHIDTGPVRQW 179
>gi|114562618|ref|YP_750131.1| twin-arginine translocation pathway signal [Shewanella
frigidimarina NCIMB 400]
gi|114333911|gb|ABI71293.1| Twin-arginine translocation pathway signal [Shewanella
frigidimarina NCIMB 400]
Length = 183
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
V+ L+ Y + TG ++ +F QY E L++ N++L D + +D +LF++L+++Q
Sbjct: 37 VKDLRFYNLHTGERSQGSFWVDGQYQSETLTEFNQVLRDHRQNVAAPIDKRLFEYLYKLQ 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I+++S YR+ +TN+ML+ R+ +A+KS H+ G A+D +PGV + L A
Sbjct: 97 ATLDNQDEIHVISAYRSPKTNQMLASRSNGVAKKSYHMKGMAMDIALPGVKTKHLRDAAE 156
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVG+Y + F+HID G VR W
Sbjct: 157 SLKLGGVGFYPRDGFVHIDCGPVRRW 182
>gi|254506992|ref|ZP_05119130.1| hypothetical protein VPMS16_2603 [Vibrio parahaemolyticus 16]
gi|219549987|gb|EED26974.1| hypothetical protein VPMS16_2603 [Vibrio parahaemolyticus 16]
Length = 180
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + + G +Y + LS+++ L D+ + MD LFD +
Sbjct: 32 DEPRALALKALNTGEELEACYFDGQKYVKNELSRIDHLCRDFRRNEVHTMDKYLFDQISL 91
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ V + ++SGYR+ TN+ L + +A+KS H+LG+A+DF + GV+L+ +
Sbjct: 92 IQSELGVESEVIVISGYRSPATNEALRSNSGGVAKKSYHMLGQAIDFRLDGVNLKQVRDA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
AI LK GGVGYY S F+HID G VR W+
Sbjct: 152 AISLKAGGVGYYPRSNFIHIDTGPVRYWS 180
>gi|324113743|gb|EGC07718.1| peptidase M15 [Escherichia fergusonii B253]
gi|325496864|gb|EGC94723.1| hypothetical protein ECD227_0961 [Escherichia fergusonii ECD227]
Length = 183
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L +R +A+KS H G+A+DF+I G++L ++
Sbjct: 93 LYRLQGLLGTRKPVQLISGYRSIDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGIALSNI 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 153 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 183
>gi|218548442|ref|YP_002382233.1| hypothetical protein EFER_1070 [Escherichia fergusonii ATCC 35469]
gi|218355983|emb|CAQ88599.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 186
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 36 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 95
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L +R +A+KS H G+A+DF+I G++L ++
Sbjct: 96 LYRLQGLLGTRKPVQLISGYRSIDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGIALSNI 155
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 156 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 186
>gi|170769226|ref|ZP_02903679.1| Tat pathway signal sequence domain/peptidase M15 family protein
[Escherichia albertii TW07627]
gi|170121878|gb|EDS90809.1| Tat pathway signal sequence domain/peptidase M15 family protein
[Escherichia albertii TW07627]
Length = 182
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDFRANKIKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L +R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|126174125|ref|YP_001050274.1| hypothetical protein Sbal_1899 [Shewanella baltica OS155]
gi|125997330|gb|ABN61405.1| protein of unknown function DUF882 [Shewanella baltica OS155]
Length = 182
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R L ++ TG + ++ Y + L+ N LL D + MD +LFD L+ ++
Sbjct: 37 IRELSLFNRHTGERDDGSYWVDGHYQSKVLNDFNHLLRDHRQNVAAPMDKRLFDLLYSLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+V + I+++SGYR+ +TN ML+ + +A+KS H+ G A+D IP V L++L + A+
Sbjct: 97 TTLNVDDEIHVISGYRSPKTNAMLASNSGGVAKKSYHMRGMAMDIAIPSVKLKTLREAAL 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+H+D G VR W
Sbjct: 157 SLKLGGVGYYPNSGFVHVDCGPVRHW 182
>gi|160875047|ref|YP_001554363.1| hypothetical protein Sbal195_1932 [Shewanella baltica OS195]
gi|217973561|ref|YP_002358312.1| hypothetical protein Sbal223_2394 [Shewanella baltica OS223]
gi|304411334|ref|ZP_07392948.1| protein of unknown function DUF882 [Shewanella baltica OS183]
gi|307305344|ref|ZP_07585092.1| protein of unknown function DUF882 [Shewanella baltica BA175]
gi|160860569|gb|ABX49103.1| protein of unknown function DUF882 [Shewanella baltica OS195]
gi|217498696|gb|ACK46889.1| protein of unknown function DUF882 [Shewanella baltica OS223]
gi|304350189|gb|EFM14593.1| protein of unknown function DUF882 [Shewanella baltica OS183]
gi|306911647|gb|EFN42072.1| protein of unknown function DUF882 [Shewanella baltica BA175]
gi|315267279|gb|ADT94132.1| protein of unknown function DUF882 [Shewanella baltica OS678]
Length = 182
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R L ++ TG + ++ Y + L+ N LL D + MD +LFD L+ ++
Sbjct: 37 IRELSLFNRHTGERDDGSYWVDGHYQSKVLNDFNHLLRDHRQNVAAPMDKRLFDLLYSLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+V + I+++SGYR+ +TN ML+ + +A+KS H+ G A+D IP V L++L + A+
Sbjct: 97 TTLNVDDEIHVISGYRSPKTNAMLASHSGGVAKKSYHMRGMAMDIAIPSVKLKTLREAAL 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+H+D G VR W
Sbjct: 157 SLKLGGVGYYPNSGFVHVDCGPVRHW 182
>gi|262402379|ref|ZP_06078940.1| lipoprotein putative [Vibrio sp. RC586]
gi|262351161|gb|EEZ00294.1| lipoprotein putative [Vibrio sp. RC586]
Length = 144
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG + G Y + L +LN L D+ + MD LFD L +IQQ ++
Sbjct: 6 TGESIETRYFNGKNYVRSELKRLNYLCRDFRRDEVHAMDKVLFDQLCQIQQLLGTQAEVH 65
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
I+SGYR+ TNK L ++++ +A+KS H+ G+A+DF + GVSL+ + + AI L+ GGVGYY
Sbjct: 66 IVSGYRSPATNKQLRKKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQVGGVGYY 125
Query: 186 --SKFLHIDVGRVRSW 199
S+F+HID G VR W
Sbjct: 126 PKSQFIHIDTGPVRQW 141
>gi|153000450|ref|YP_001366131.1| hypothetical protein Shew185_1925 [Shewanella baltica OS185]
gi|151365068|gb|ABS08068.1| protein of unknown function DUF882 [Shewanella baltica OS185]
Length = 182
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R L ++ TG + ++ Y + L+ N LL D + MD +LFD L+ ++
Sbjct: 37 IRELSLFNRHTGERDDGSYWVDGHYQSKVLNDFNHLLRDHRQNVAAPMDKRLFDLLYSLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+V + I+++SGYR+ +TN ML+ + +A+KS H+ G A+D IP V L++L + A+
Sbjct: 97 TTLNVDDEIHVISGYRSPKTNAMLASHSGGVAKKSYHMRGMAMDIAIPSVKLKTLREAAL 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+H+D G VR W
Sbjct: 157 SLKLGGVGYYPNSGFVHVDCGPVRHW 182
>gi|295096374|emb|CBK85464.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 183
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGETLKAEFFDGRGYIQDELARLNHFFRDFRANKIKAIDPGLFDQ 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + ++SGYR+ +TN L +R +A+K H G+A+DF+I GVSL ++
Sbjct: 93 LYRLQGLLGTKRPVQLISGYRSLDTNNELRAHSRGVAKKDYHTKGQAMDFHIEGVSLANI 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 153 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|300716097|ref|YP_003740900.1| hypothetical protein EbC_15180 [Erwinia billingiae Eb661]
gi|299061933|emb|CAX59049.1| Putative exported protein [Erwinia billingiae Eb661]
Length = 182
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G Y+++ LS+LN D+ + + ++DP LFD
Sbjct: 32 LSTSRPRVLTLNNLNTGETLKTEFFNGKSYDKDELSRLNHFFRDYRANKVKNIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ TN L + +A+ S H LG+A+D +I G++L ++
Sbjct: 92 LYRLQALLDTRKPVTLISGYRSLATNNSLRAHTKGVAKHSYHTLGQAMDLHIDGIALSNV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ + GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMGAGGVGYYPSSNFVHIDTGPARHW 182
>gi|300722553|ref|YP_003711843.1| hypothetical protein XNC1_1582 [Xenorhabdus nematophila ATCC 19061]
gi|297629060|emb|CBJ89645.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus nematophila ATCC 19061]
Length = 182
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+L L+ H +++++ R L+ + TG F G +YN+ LS+LN L
Sbjct: 18 ALGLTLLPQHALAALTT-----PRPRILRFDNLHTGETLKAEFFDGRRYNKAELSRLNYL 72
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
D+ + +DP+LFD ++ +Q + + + ++SGYR+ TN ML + + +A+ S
Sbjct: 73 FRDFRQNKIKTIDPRLFDQIYLLQMMMGINKPVQLVSGYRSLTTNNMLRQASGGVAKHSY 132
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H GKA+DF+I G+ L + K A++++ GGVG+Y K F+HID G VR+W
Sbjct: 133 HTRGKAMDFHIDGIQLAHVRKAALKMRSGGVGFYPKSNFIHIDTGPVRTW 182
>gi|91792859|ref|YP_562510.1| hypothetical protein Sden_1502 [Shewanella denitrificans OS217]
gi|91714861|gb|ABE54787.1| protein of unknown function DUF882 [Shewanella denitrificans OS217]
Length = 182
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
V+ L Y TG + F QY ++ L +L D + MD +L+D+L+++Q
Sbjct: 37 VKELSFYNRHTGERGQGDFWVDGQYQKDALKAFEHVLRDHRQNLAAPMDKRLYDYLFKLQ 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
Q + I+++S YR+ +TN+ML+ R+ +A+KS H+ G A+D +PGV L L A
Sbjct: 97 QLVEYQDEIHVISAYRSPKTNQMLASRSNGVAKKSYHMKGMAMDIAMPGVKLAHLKDAAK 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVG+Y S F+H+D G VRSW
Sbjct: 157 SLKLGGVGFYPSSGFIHVDCGPVRSW 182
>gi|300816969|ref|ZP_07097188.1| Tat pathway signal sequence protein [Escherichia coli MS 107-1]
gi|300530321|gb|EFK51383.1| Tat pathway signal sequence protein [Escherichia coli MS 107-1]
Length = 182
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSPGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|229521382|ref|ZP_04410801.1| hypothetical protein VIF_001912 [Vibrio cholerae TM 11079-80]
gi|229341480|gb|EEO06483.1| hypothetical protein VIF_001912 [Vibrio cholerae TM 11079-80]
Length = 182
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG + G Y + L +LN L D+ + MD LFD L +IQ
Sbjct: 35 RELALSNLHTGESIETRYFNGKNYVRSELKRLNHLCRDFRRDEVHAMDKLLFDQLCQIQL 94
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI
Sbjct: 95 LLGTQAEVHIVSGYRSPMTNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAIS 154
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S+F+HID G VR W
Sbjct: 155 LQAGGVGYYPKSQFIHIDTGPVRQW 179
>gi|241767411|ref|ZP_04765114.1| protein of unknown function DUF882 [Acidovorax delafieldii 2AN]
gi|241361826|gb|EER58082.1| protein of unknown function DUF882 [Acidovorax delafieldii 2AN]
Length = 188
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
L +Q R+L T + + + G + + L+ LN L D +S ++ MDPQLF+
Sbjct: 36 LANQPGARSLSFDHTHTSERLALVYALGDAFVPQALTSLNHFLRDHYSGEAGVMDPQLFN 95
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
L +I+Q V + ++SGYR+ TN+ L + R +A+ S H+ GKA+D +PGV L
Sbjct: 96 LLHQIRQELRVQQPFQVISGYRSPATNQTLRATRGGGVAKHSLHMDGKAIDVRLPGVPLA 155
Query: 169 SLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
SL A+ L GGVG+Y + F+H+D G VR W
Sbjct: 156 SLRDAALSLGAGGVGFYPREQFVHVDTGPVRRW 188
>gi|284007573|emb|CBA73121.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 184
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L + L+ + TG F G +YN L++LN L D + + +DP+LFD
Sbjct: 34 LTTPRPKILRFENLHTGEFLKTEFFDGRRYNNAELTRLNHLFRDHRNNKIKTIDPKLFDQ 93
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + + ++SGYR+ ETN L R++ +A+ S H G+A+DF+I G+ L +
Sbjct: 94 IYLLQMLMGTNKPVQLVSGYRSVETNNALRRKSSGVAKNSYHTHGRAMDFHIKGIELSHI 153
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A++++ GGVGYY S F+HID G VR W
Sbjct: 154 RKAALKMRAGGVGYYPNSNFVHIDTGPVRKW 184
>gi|320352700|ref|YP_004194039.1| hypothetical protein Despr_0572 [Desulfobulbus propionicus DSM
2032]
gi|320121202|gb|ADW16748.1| protein of unknown function DUF882 [Desulfobulbus propionicus DSM
2032]
Length = 188
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R+L T + +T+ G YN L+Q+++ L D+ + Q+ +DP+L D LW IQ
Sbjct: 44 RSLSFVHTRTQQELTLTYAWGQAYNPRALAQISQFLRDYQTGQTHPIDPKLLDILWAIQG 103
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++SG+R+ +TN+ L R + +A S H+ GKAVD PG+ +++ A+
Sbjct: 104 EMGRKGVYEVISGFRSPQTNRKLRRTSSGVAGHSLHMQGKAVDIRFPGIDTDQIHQCAVE 163
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
++ GGVGYY+K F+H+D G+ R+W
Sbjct: 164 MRTGGVGYYAKADFVHLDSGQYRTW 188
>gi|188591282|ref|YP_001795882.1| hypothetical protein RALTA_A0494 [Cupriavidus taiwanensis LMG
19424]
gi|170938176|emb|CAP63162.1| conserved hypothetical protein, DUF882, COG3108; putative exported
protein [Cupriavidus taiwanensis LMG 19424]
Length = 195
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSS-----DLLDQEEVRTLKIYVVSTGSKAIVTFKRGS 78
F T+ +L+ L+ + + +++S L + RTL TG + + + G
Sbjct: 12 FLHTTGTLALAAGLMPFAPRRALASLPAHGALAGLPDARTLAFDHTHTGERVSLVYAVGD 71
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
++ E L+ LN L D +S + +DPQLFD L+++++ + ++SGYR+ TN
Sbjct: 72 RFVPEALTTLNGFLRDHYSGKVGTIDPQLFDLLFQVRRELGTDQPFQVISGYRSPATNSR 131
Query: 139 L-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGR 195
L + R +A+ S H+ GKA+D + GVSL + A L+ GGVGYY +F+HID GR
Sbjct: 132 LRNSRGGGVAKHSLHMDGKAIDIRLAGVSLADVRDAAKSLQGGGVGYYETDQFVHIDTGR 191
Query: 196 VRSW 199
VR W
Sbjct: 192 VRYW 195
>gi|322832249|ref|YP_004212276.1| hypothetical protein Rahaq_1527 [Rahnella sp. Y9602]
gi|321167450|gb|ADW73149.1| protein of unknown function DUF882 [Rahnella sp. Y9602]
Length = 183
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + ++TG F G +YN++ L++LN L D+ +++ +DP LFD
Sbjct: 32 LSTPRPRILVVNNINTGETLKTEFFDGKRYNKDELARLNHLFRDYRAEKVKSIDPALFDH 91
Query: 111 LWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L+ +Q + + ++SGYR+ TN + +A+ S H LG+A+DF+I G+ L +
Sbjct: 92 LYRLQVMLGGTNKPVQLISGYRSLATNNSMREPGSGVAKHSYHTLGQAMDFHIQGIELSN 151
Query: 170 LYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ K A++++ GGVGYY S F+HID G R+W
Sbjct: 152 IRKAALKMRMGGVGYYPRSNFVHIDTGPARTW 183
>gi|24373670|ref|NP_717713.1| hypothetical protein SO_2110 [Shewanella oneidensis MR-1]
gi|24348020|gb|AAN55157.1|AE015652_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 182
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR L ++ TG ++ Y E L+ + LL D + MD +LFD L+ ++
Sbjct: 37 VRELSLFNRHTGEYNNGSYWVDGHYQSEVLADFSHLLRDHRQNVAAPMDKRLFDLLYTLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ + I+++SGYR+ +TN ML+ ++ +A+KS H+ G A+D IPGV+L+++ A+
Sbjct: 97 STLNTDKEIHVISGYRSPKTNAMLAGKSGGVAKKSYHMQGMAMDIAIPGVNLKTIRDAAL 156
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY K F+H+D G VR W
Sbjct: 157 SLKLGGVGYYPKSGFVHVDCGPVRHW 182
>gi|323500086|ref|ZP_08105040.1| hypothetical protein VISI1226_08739 [Vibrio sinaloensis DSM 21326]
gi|323314942|gb|EGA67999.1| hypothetical protein VISI1226_08739 [Vibrio sinaloensis DSM 21326]
Length = 180
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ R L + ++TG + G Y ++ LS+++ L D+ + MD LFD +
Sbjct: 32 DKPRALALKALNTGEALETCYFDGRDYLKKELSRIDNLCRDFRRNEVHPMDKYLFDQISL 91
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ V + ++SGYR+ TN+ L ++ +A+KS H+LG+A+DF + GV L+ +
Sbjct: 92 IQSELGVEAEVIVISGYRSPATNEALRGKSGGVAKKSYHMLGQAIDFRLDGVDLKKVRDA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
A+ LK GGVGYY S F+HID G VRSW+
Sbjct: 152 ALSLKAGGVGYYPRSNFVHIDTGPVRSWS 180
>gi|146311102|ref|YP_001176176.1| hypothetical protein Ent638_1445 [Enterobacter sp. 638]
gi|145317978|gb|ABP60125.1| protein of unknown function DUF882 [Enterobacter sp. 638]
Length = 183
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 33 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFRDYRANKIKAIDPGLFDQ 92
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L +R +A+KS H G+A+DF+I G+SL ++
Sbjct: 93 LFRLQGLLGTRKPVQLVSGYRSLDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGISLANV 152
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G R W
Sbjct: 153 RKAALSLRAGGVGYYPRSNFVHIDTGPNRHW 183
>gi|302038386|ref|YP_003798708.1| hypothetical protein NIDE3087 [Candidatus Nitrospira defluvii]
gi|300606450|emb|CBK42783.1| conserved exported protein of unknown function, DUF882 [Candidatus
Nitrospira defluvii]
Length = 196
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFK-RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
+ +Y + T + VT++ Y+Q+ L LN L H+ ++ MD QL +F+ +Q+
Sbjct: 53 VSLYNLHTDERLSVTYRDEAGAYDQDALHALNHFLRCHHTNETTMMDVQLIEFINLVQKR 112
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
+ I+SGYR+ E N+ L R + AR S HV G+AVD IPGV LR+L ++A+RL
Sbjct: 113 VGGRREVLIVSGYRSPEYNEQLIRMGTRAARHSYHVSGQAVDVQIPGVPLRTLREVALRL 172
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
GGVGYY KF+H+D G R W
Sbjct: 173 GCGGVGYYPRGKFVHLDSGPFRHW 196
>gi|119899289|ref|YP_934502.1| hypothetical protein azo2999 [Azoarcus sp. BH72]
gi|119671702|emb|CAL95615.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 193
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG + +T+ G +Y L LN L D +S + +MDPQLFD L ++
Sbjct: 55 TGEQLALTYAVGERYLPAALGDLNHFLRDHYSGEVGNMDPQLFDLLHTLRHTLGCSAPFQ 114
Query: 126 ILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
++S YR TN L + R+ +AR+S H+ GKA+D I GV+L L A+ L+ GGVGY
Sbjct: 115 VISAYRCPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADLRDAALSLQLGGVGY 174
Query: 185 YSK--FLHIDVGRVRSWT 200
Y + F+H+D GRVRSW
Sbjct: 175 YPREQFVHVDTGRVRSWA 192
>gi|323492995|ref|ZP_08098132.1| hypothetical protein VIBR0546_16231 [Vibrio brasiliensis LMG 20546]
gi|323312774|gb|EGA65901.1| hypothetical protein VIBR0546_16231 [Vibrio brasiliensis LMG 20546]
Length = 180
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ R+L + + T + G+ Y + LS+LN + D+ + MD +LFD +
Sbjct: 32 DKPRSLALTNLHTREALETCYFDGNNYVSKELSRLNHICRDFRRNEVHPMDKRLFDHISL 91
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ SV + I+SGYR+ TN+ L +++ +A+KS H+LG+A+DF + GVSL+ + +
Sbjct: 92 IQKELSVETEVQIISGYRSPATNEALRGKSKGVAKKSYHMLGQAIDFRLDGVSLKRVRDV 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+ LK GGVGYY S F+HID G VR W+
Sbjct: 152 SRELKLGGVGYYPGSNFVHIDTGPVRYWS 180
>gi|294140650|ref|YP_003556628.1| hypothetical protein SVI_1879 [Shewanella violacea DSS12]
gi|293327119|dbj|BAJ01850.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 183
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+L + + TG + ++ Y + LS + +L D +S+ MD +L+D L++++
Sbjct: 37 VRSLGFHNLHTGERGQGSYWVDGNYQNKILSNFSHILRDHRRNESVPMDKRLYDLLFKLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ +V + ++SGYR+ +TN ML+ + +A+KS H+ G A+D I V+L L AI
Sbjct: 97 ESLNVEQEFNVISGYRSPKTNAMLAAKTSGVAKKSYHMKGMAMDIAIEDVNLSDLRDAAI 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSWT 200
LK GGVGYY S F+H+D G VRSW
Sbjct: 157 ELKLGGVGYYPRSGFIHVDTGPVRSWA 183
>gi|121606473|ref|YP_983802.1| hypothetical protein Pnap_3585 [Polaromonas naphthalenivorans CJ2]
gi|120595442|gb|ABM38881.1| protein of unknown function DUF882 [Polaromonas naphthalenivorans
CJ2]
Length = 186
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R L + T K + + G +Y E L LNR L D ++ +DPQ+FD L +
Sbjct: 39 DARGLALVHTHTHEKIDLVYASGERYVPEALGWLNRFLRDHYTGDIGVIDPQVFDLLHSV 98
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSR-RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
QQ ++SGYR TN L + R+ +A KS H+ G+A+D +PGV L L++
Sbjct: 99 QQALGSKGAFEVISGYRCPATNSHLRQTRSGGVATKSLHMEGRAIDIRLPGVPLADLHQA 158
Query: 174 AIRLKRGGVGYYSK--FLHIDVGRVRSW 199
A+ L+ GGVG+Y + F+H+D GRVR+W
Sbjct: 159 ALSLRAGGVGFYPREQFVHLDTGRVRNW 186
>gi|52424878|ref|YP_088015.1| hypothetical protein MS0823 [Mannheimia succiniciproducens MBEL55E]
gi|52306930|gb|AAU37430.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 188
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L++ ++TG + G + L+QLN LL D + + MDP LF L++IQ
Sbjct: 40 RILRLRNINTGERFSSEIVNGKLLSSSALNQLNWLLRDRRNNHTYRMDPNLFSKLYQIQG 99
Query: 117 YFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+ GYR+ TN + RR+R +A S HV G+A+DF I GVSL ++ + A
Sbjct: 100 NLGLRNTEIQIICGYRSAATNSAMHRRSRGVASNSFHVKGQAIDFRIDGVSLANVKRSAE 159
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSWT 200
L GGVGYY S F+H+D G VR+W+
Sbjct: 160 SLSNGGVGYYPRSNFVHVDTGPVRTWS 186
>gi|144899602|emb|CAM76466.1| Protein of unknown function DUF882, bacterial [Magnetospirillum
gryphiswaldense MSR-1]
Length = 187
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L +Y + TG + +Y + LSQ++RLL D S + +DP+L D + +
Sbjct: 43 RALNLYNIHTGEWVKTVYWADGRYIAKSLSQISRLLRDHRSGDTHPVDPRLLDVMAATHR 102
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I+I+SGYR+ TN ML+ +A+ S H+ GKAVD IPG + R + + A
Sbjct: 103 RLGAKGAIHIVSGYRSPTTNAMLAAATDGVAQGSLHMSGKAVDIRIPGATTRVVGRAAKS 162
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVG Y SKF+H+D GRVR W
Sbjct: 163 LKVGGVGTYPGSKFVHLDTGRVRFW 187
>gi|308049139|ref|YP_003912705.1| hypothetical protein Fbal_1427 [Ferrimonas balearica DSM 9799]
gi|307631329|gb|ADN75631.1| protein of unknown function DUF882 [Ferrimonas balearica DSM 9799]
Length = 184
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R L Y TG + F Y Q GLSQL+ +L D + +D L++ ++++
Sbjct: 39 LRALSFYNRHTGERTTAEFWGEGHYLQSGLSQLDTVLRDHRVNEVAPIDRGLYELVYQLA 98
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ + I+++SGYR+ +TN+ML+ R+ +A++S H AVD +PGV+L L K A+
Sbjct: 99 EKLDYHKDIHLISGYRSMKTNEMLAARSGGVAKRSYHTKAMAVDIAMPGVALSDLRKAAL 158
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S F+H+D G VR W
Sbjct: 159 SLQGGGVGYYPRSGFVHVDTGPVRRW 184
>gi|257095731|ref|YP_003169372.1| hypothetical protein CAP2UW1_4202 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048255|gb|ACV37443.1| protein of unknown function DUF882 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 185
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R L+ TG + V F G +Y +GL +LN L D +S + +DPQLFD L+E
Sbjct: 38 QARRLEFDHTHTGERLSVVFAVGDRYVDDGLRKLNHFLRDHYSGEVGSIDPQLFDLLFET 97
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNR---KIARKSQHVLGKAVDFYIPGVSLRSLY 171
++ + ++SGYR TN L RN +AR+S H+ G+A+D I GV L +
Sbjct: 98 RRELGCTQPFEVISGYRCAATNTRL--RNSGGGGVARQSLHMEGRAIDIRIDGVPLADVR 155
Query: 172 KIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ L+ GGVG+Y SKF+H+D G+VR W
Sbjct: 156 DAAMSLQAGGVGFYPRSKFVHLDTGKVRYW 185
>gi|153835591|ref|ZP_01988258.1| twin-arginine translocation pathway signal [Vibrio harveyi HY01]
gi|148867808|gb|EDL67048.1| twin-arginine translocation pathway signal [Vibrio harveyi HY01]
Length = 182
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + GS Y E L +L++ D + MD +LFD + +
Sbjct: 35 DEPRVLAMNNLNTGELLESCYFNGSSYVDEELKRLDKFCRDHRRNEVHPMDRRLFDQISQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++ +
Sbjct: 95 IQKLIGTEAEVIVISGYRSPVTNASLRNSSSGVAKKSMHMEGKAIDFRLDGVKLSTVREA 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 155 ALSLKAGGVGYYPRSNFVHIDTGAVRSW 182
>gi|56477064|ref|YP_158653.1| hypothetical protein ebA2889 [Aromatoleum aromaticum EbN1]
gi|56313107|emb|CAI07752.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 184
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R+L TG + V + G +Y E L++LNR + D +S + MDP+LFD L+ +
Sbjct: 37 DARSLAFDHTHTGERVSVVYAVGERYVPEALTKLNRFMRDHYSGEVGHMDPKLFDLLYRL 96
Query: 115 QQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ E ++SGYR TN L + R +A++S H+ GKA+D I L L
Sbjct: 97 KLTLGSRESFQVISGYRCPTTNSTLRNTRGGGVAKRSLHMDGKAIDVRIADTPLADLRDA 156
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ L GGVGYY +F+H+D GRVRSW
Sbjct: 157 ALSLGVGGVGYYPHDQFVHLDTGRVRSW 184
>gi|91227205|ref|ZP_01261664.1| hypothetical protein V12G01_16462 [Vibrio alginolyticus 12G01]
gi|269967086|ref|ZP_06181154.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91188733|gb|EAS75021.1| hypothetical protein V12G01_16462 [Vibrio alginolyticus 12G01]
gi|269828345|gb|EEZ82611.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 169
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G +Y + L +LN D + MD +LFD + +
Sbjct: 22 DEPRALAMNNLNTGEILETCYFDGKRYINDELQRLNEFCRDHRRNEVHPMDRRLFDQISQ 81
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + ++A+KS H+ GKA+DF + GV L ++
Sbjct: 82 IQKLIGTEAEVIVISGYRSPATNASLRNGSSRVAKKSMHMEGKAIDFRLDGVKLSTVRDA 141
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 142 ALSLKAGGVGYYPGSNFVHIDTGAVRSW 169
>gi|260597326|ref|YP_003209897.1| hypothetical protein CTU_15340 [Cronobacter turicensis z3032]
gi|260216503|emb|CBA29676.1| Uncharacterized protein ycbK [Cronobacter turicensis z3032]
Length = 188
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 38 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFRDYRANKVKAIDPRLFDQ 97
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L ++R +A+ S H G+A+DF+I G+ L ++
Sbjct: 98 LFRLQGLLGTRKPVQLISGYRSVDTNNELRSKSRGVAKHSYHTKGQAMDFHIEGILLSNI 157
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 158 RKAALSLRAGGVGYYPSSNFVHIDTGPLRHW 188
>gi|254363168|ref|ZP_04979217.1| hypothetical protein MHA_2751 [Mannheimia haemolytica PHL213]
gi|261493953|ref|ZP_05990461.1| hypothetical protein COK_2351 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494762|ref|ZP_05991241.1| hypothetical protein COI_0555 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153095062|gb|EDN75613.1| hypothetical protein MHA_2751 [Mannheimia haemolytica PHL213]
gi|261309579|gb|EEY10803.1| hypothetical protein COI_0555 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310385|gb|EEY11580.1| hypothetical protein COK_2351 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 184
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L+ V+TG F G N+ LSQLN L+ D H Q +DP+LF L ++Q+
Sbjct: 39 ALRFRNVNTGDTYTAKFGAGG-LNKTDLSQLNYLMRDRHINQVKAIDPKLFVKLNQLQRR 97
Query: 118 FSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I +LSGYR+ +TN L RR+R +A S H+LG+AVDF + GV L + + A
Sbjct: 98 LGFHNAEILVLSGYRSAQTNARLRRRSRGVASHSYHILGQAVDFQVSGVPLYKVKQAAES 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+H+D G VR+W
Sbjct: 158 LNNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|288957910|ref|YP_003448251.1| hypothetical protein AZL_010690 [Azospirillum sp. B510]
gi|288910218|dbj|BAI71707.1| hypothetical protein AZL_010690 [Azospirillum sp. B510]
Length = 209
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 12/186 (6%)
Query: 16 GLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFK 75
G+ +A+ VT+P+ ++ ++ L VR + ++ ++T + +
Sbjct: 34 GIATGLATSVVTAPVL--------LGAGTAEAAPLAGG--VRRISLHNINTQERFDGVYW 83
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQET 135
QY E L +L+ LL D +KQ DP+LFD L + Q + ++ GYR++ T
Sbjct: 84 ADGQYKPEVLRKLDVLLRDHRAKQVCRYDPRLFDLLARVHQSVGSDDPFEVICGYRSRRT 143
Query: 136 NKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDV 193
N M RR+R +A++S H G A+D +P LR++ + A ++ GGVGYY S F+H+DV
Sbjct: 144 NAMARRRSRGVAKESYHTRGMAIDIRLPDTQLRAISETAKGMQSGGVGYYPRSGFVHLDV 203
Query: 194 GRVRSW 199
G VRSW
Sbjct: 204 GPVRSW 209
>gi|156974987|ref|YP_001445894.1| hypothetical protein VIBHAR_02709 [Vibrio harveyi ATCC BAA-1116]
gi|156526581|gb|ABU71667.1| hypothetical protein VIBHAR_02709 [Vibrio harveyi ATCC BAA-1116]
Length = 195
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + GS Y E L +L++ D + MD +LFD + +
Sbjct: 48 DEPRVLAMNNLNTGELLESCYFNGSSYVDEELKRLDKFCRDHRRNEVHPMDRRLFDQISQ 107
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++ +
Sbjct: 108 IQKLIGTEAEVIVISGYRSPVTNASLRNSSSGVAKKSMHMEGKAIDFRLDGVKLSTVREA 167
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 168 ALSLKAGGVGYYPRSNFVHIDSGAVRSW 195
>gi|197284625|ref|YP_002150497.1| hypothetical protein PMI0731 [Proteus mirabilis HI4320]
gi|227356808|ref|ZP_03841193.1| protein of hypothetical function DUF882 [Proteus mirabilis ATCC
29906]
gi|194682112|emb|CAR41706.1| putative exported protein [Proteus mirabilis HI4320]
gi|227163098|gb|EEI48033.1| protein of hypothetical function DUF882 [Proteus mirabilis ATCC
29906]
Length = 182
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 18/188 (9%)
Query: 14 WIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVT 73
W+GL ++ L+ H +S+++ + L+ ++TG
Sbjct: 11 WLGLGMAAVGL-----------GLLPSHAFASLAT-----PRPKILRFNNLNTGETIKAE 54
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQ 133
F G +YN++ L++LN L D + +DP LFD ++ +Q + + + ++SGYR+
Sbjct: 55 FFDGKRYNKQELARLNHLFRDHRQNKVKTIDPALFDQIYLLQVMLNNNKAVELISGYRSL 114
Query: 134 ETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHI 191
TN L + +A+KS H G+A+DF + G L + ++A+R+K GGVGYY S F+HI
Sbjct: 115 ATNNHLRQHTSGVAKKSYHTRGQAMDFRLVGTDLSKVRQVALRMKAGGVGYYPRSNFVHI 174
Query: 192 DVGRVRSW 199
D G VRSW
Sbjct: 175 DTGPVRSW 182
>gi|152990488|ref|YP_001356210.1| hypothetical protein NIS_0739 [Nitratiruptor sp. SB155-2]
gi|151422349|dbj|BAF69853.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 179
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
+ L++Y V TG + VTF +Y E + L L D+ + + +D ++ ++L+++ +
Sbjct: 30 KVLQLYHVHTGERRKVTFWLDGEYIPEEIESLQYFLRDFRNDEIHPIDIKVIEYLYDVSK 89
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
S I++LS YR+ TN+ L +A++S H+ GKA+DF IPG+SL + A+
Sbjct: 90 KCSHDREIHVLSAYRSPSTNEYLRHHGGGVAKQSYHLFGKAIDFRIPGISLHHVRNTALS 149
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
L +GGVGYY K F+HID G+ RSW
Sbjct: 150 LHKGGVGYYPKSGFIHIDSGKPRSW 174
>gi|290473859|ref|YP_003466733.1| hypothetical protein XBJ1_0798 [Xenorhabdus bovienii SS-2004]
gi|289173166|emb|CBJ79939.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 182
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+L L+ H +++++ R L+ + TG F G +YN+ L++LN L
Sbjct: 18 ALGLSLLPQHALAALTT-----PRPRILRFDNLHTGETLKAEFFDGRRYNKSELARLNYL 72
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
D+ + +DP+LFD ++ +Q + + + ++SGYR+ TN ML + + +A++S
Sbjct: 73 FRDYRQNKIKSIDPKLFDQIYLLQMMIGINKPVQLVSGYRSLTTNNMLRQASGGVAKRSY 132
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H G+A+DF+I V L + K A++++ GGVG+Y K F+HID G VR+W
Sbjct: 133 HTRGQAMDFHIDSVQLAHIRKAALKMRAGGVGFYPKSNFIHIDTGPVRTW 182
>gi|254490599|ref|ZP_05103785.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224464343|gb|EEF80606.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 195
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 48 SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQL 107
+++L Q E R++ + + TG T+ QY L+ +NR+L D + D+D L
Sbjct: 41 ANMLKQPE-RSIALLNLHTGEHVKATYWAEGQYQSSELAAINRVLRDHRTGDINDIDSNL 99
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
+ L + + +++SGYR+ +TN +L + + +A+KS H+ GKA+D +PG L
Sbjct: 100 IEMLNLLHHKMLGKQPFHVISGYRSPKTNALLRQNSDGVAKKSLHMQGKAIDVRLPGREL 159
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
L K A+ LK GGVGYY S F+HID GRVR+W
Sbjct: 160 NELQKSALNLKVGGVGYYPGSDFIHIDTGRVRNW 193
>gi|157375587|ref|YP_001474187.1| hypothetical protein Ssed_2450 [Shewanella sediminis HAW-EB3]
gi|157317961|gb|ABV37059.1| protein of unknown function DUF882 [Shewanella sediminis HAW-EB3]
Length = 182
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+L + TG + ++ Y LS + +L D +S MD +L+D L++++
Sbjct: 37 VRSLGFRNLHTGERGQGSYWVDGNYQSGILSDFSHILRDHRRNESAPMDKRLYDLLFKLK 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ +V + ++SGYR+ +TN ML+ ++ +A+KS H+ G A+D IP V+L L + AI
Sbjct: 97 ESLNVDQDFNVISGYRSPKTNAMLASKSNGVAKKSYHMKGMAMDIAIPDVNLSHLREAAI 156
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVGYY S F+H+D G VR+W
Sbjct: 157 ELKLGGVGYYPQSGFIHVDTGPVRTW 182
>gi|288941017|ref|YP_003443257.1| hypothetical protein Alvin_1286 [Allochromatium vinosum DSM 180]
gi|288896389|gb|ADC62225.1| protein of unknown function DUF882 [Allochromatium vinosum DSM 180]
Length = 180
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R L + T VT++ G Y + L +LN+ D+ + MDPQLFD L++
Sbjct: 30 ERPRVLSFRHLHTDEWVDVTYRIGDTYQRSALLRLNQFFRDFRTGDVTTMDPQLFDILYD 89
Query: 114 IQQYFSVPEYIY-ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
++ P+ + ++S YR+ TN L + +R +A+ S H+ G+A+D P +S R L
Sbjct: 90 LKLRLGDPDARFDVISAYRSPATNARLRKASRGVAKNSLHLHGQAIDVRFPDLSTRRLRD 149
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ L RGGVGYY S F+H+D G VRSW
Sbjct: 150 AAVSLGRGGVGYYRRSDFVHLDTGAVRSW 178
>gi|90579550|ref|ZP_01235359.1| hypothetical outer membrane protein [Vibrio angustum S14]
gi|90439124|gb|EAS64306.1| hypothetical outer membrane protein [Vibrio angustum S14]
Length = 185
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R L I + TG + + G Y + Q++ L D+ + +D +L+D + +I
Sbjct: 37 DPRNLLIRNLHTGEELETKYFNGKTYVGSAVRQIDHLCRDFRQNEVARIDRRLYDAISQI 96
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q Y Y ++SGYR+ +TNKML++R+ +A+KS H+ +A+DF + GV L + + A
Sbjct: 97 QTYLGHEGYAQLISGYRSPKTNKMLAKRSGGVAKKSYHMKAQAIDFNLEGVPLAKIRQAA 156
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ LK GGVGYY S+F+HID G VR+W
Sbjct: 157 MDLKIGGVGYYPGSQFVHIDTGPVRNW 183
>gi|312883637|ref|ZP_07743362.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368860|gb|EFP96387.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 182
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
++E R+L + + TG + G Y + + +LN L D+ ++ MD +LFD +
Sbjct: 30 ERESARSLAMKSLHTGECIETCYFNGRHYVESEIRKLNYLCRDFRREEVTPMDKRLFDHI 89
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
IQ + + ++SGYR+ TN+ L + ++ +A++S H LG+A+DF + GV L+ +
Sbjct: 90 DGIQNLLGIQAEVLLISGYRSPATNEELRKLSKGVAKRSYHTLGQAIDFRLDGVDLKQVR 149
Query: 172 KIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A LK GG+GYY S F+HID G VR W
Sbjct: 150 DAAFELKLGGLGYYPGSDFIHIDTGPVRYW 179
>gi|260776044|ref|ZP_05884939.1| hypothetical protein VIC_001428 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607267|gb|EEX33532.1| hypothetical protein VIC_001428 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 179
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ R L + TG + + G Y LS+++ + D+ + +MD LFD +
Sbjct: 32 DQPRALAFNNLHTGEELESCYFDGRDYVANELSRIDNICRDFRRNEVHEMDKYLFDQISL 91
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ V + I+SGYR+ TN L ++ +A+KS H+LG+A+DF + GV+L+ +
Sbjct: 92 IQSELGVEAEVQIISGYRSPATNAALRSKSSGVAKKSYHMLGQAIDFRLDGVNLKKVRDA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VR W
Sbjct: 152 AIELKAGGVGYYPRSNFVHIDTGPVRHW 179
>gi|269961714|ref|ZP_06176075.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833579|gb|EEZ87677.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 169
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G+ Y E L +L++ D + MD +LFD + +
Sbjct: 22 DEPRVLAMNNLNTGELLESCYFNGTNYVDEELKRLDQFCRDHRRNEVHPMDRRLFDQISQ 81
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 82 IQKLIGTEAEVIVISGYRSPLTNASLRNGSSGVAKKSMHMEGKAIDFRLDGVKLSTVRDA 141
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 142 ALSLKAGGVGYYPRSNFVHIDTGAVRSW 169
>gi|304310213|ref|YP_003809811.1| Bacterial protein of unknown function (DUF882) [gamma
proteobacterium HdN1]
gi|301795946|emb|CBL44147.1| Bacterial protein of unknown function (DUF882) [gamma
proteobacterium HdN1]
Length = 188
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + TG K V ++ G Y + + QL L D+ + MDP L+D LW ++Q
Sbjct: 42 RLLAFDHLHTGEKLAVVYRVGGHYVPQAMHQLQHLTRDFRTGGIHRMDPNLYDLLWHLRQ 101
Query: 117 YFSVPEYIYILSGYRTQETNKML-SRRNRK--IARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ I+S YR+ +TN+ L +RR ++ +A +S H+ G+A+D + GV+L +L
Sbjct: 102 DIESDQPFEIISAYRSPQTNQALRARRGQRSGVATRSLHMDGQAMDIAVGGVALTALRDA 161
Query: 174 AIRLKRGGVGYYSK-FLHIDVGRVRSW 199
A+ LK GGVGYY + F+H+D GRVR W
Sbjct: 162 ALDLKAGGVGYYPEGFIHVDTGRVRRW 188
>gi|153839458|ref|ZP_01992125.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ3810]
gi|260363712|ref|ZP_05776496.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
K5030]
gi|260879721|ref|ZP_05892076.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AN-5034]
gi|260901618|ref|ZP_05910013.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ4037]
gi|149747015|gb|EDM58003.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ3810]
gi|308093403|gb|EFO43098.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AN-5034]
gi|308108693|gb|EFO46233.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ4037]
gi|308113391|gb|EFO50931.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
K5030]
gi|328474746|gb|EGF45551.1| hypothetical protein VP10329_18625 [Vibrio parahaemolyticus 10329]
Length = 182
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G++Y + L +LN D + MD +LFD + +
Sbjct: 35 DEPRVLAMNNLNTGELLETCYFDGNRYVGKELQRLNEFCRDHRRNEVHPMDKRLFDQISQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 95 IQKLIGTESEVIVISGYRSPVTNASLRSGSTGVAKKSLHMEGKAIDFRLDGVKLSTVRDA 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VRSW
Sbjct: 155 AISLKAGGVGYYPGSNFVHIDTGAVRSW 182
>gi|262393899|ref|YP_003285753.1| hypothetical protein VEA_003128 [Vibrio sp. Ex25]
gi|262337493|gb|ACY51288.1| hypothetical protein VEA_003128 [Vibrio sp. Ex25]
Length = 169
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G +Y + L +LN D + MD +LFD + +
Sbjct: 22 DEPRELAMNNLNTGELLETCYFDGRRYLDDELKKLNEFCRDHRRNEVHPMDRRLFDQISQ 81
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 82 IQKLIGTDAEVIVISGYRSPLTNASLRKGASGVAKKSLHMEGKAIDFRLDGVKLSAVRDA 141
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VRSW
Sbjct: 142 AISLKAGGVGYYPSSNFVHIDTGAVRSW 169
>gi|28898689|ref|NP_798294.1| hypothetical protein VP1915 [Vibrio parahaemolyticus RIMD 2210633]
gi|308095628|ref|ZP_05907246.2| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
Peru-466]
gi|28806907|dbj|BAC60178.1| putative exported protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086594|gb|EFO36289.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
Peru-466]
Length = 186
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G++Y + L +LN D + MD +LFD + +
Sbjct: 39 DEPRVLAMNNLNTGELLETCYFDGNRYVGKELQRLNEFCRDHRRNEVHPMDKRLFDQISQ 98
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 99 IQKLIGTESEVIVISGYRSPVTNASLRSGSTGVAKKSLHMEGKAIDFRLDGVKLSTVRDA 158
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VRSW
Sbjct: 159 AISLKAGGVGYYPGSNFVHIDTGAVRSW 186
>gi|94501827|ref|ZP_01308339.1| hypothetical protein RED65_14392 [Oceanobacter sp. RED65]
gi|94426048|gb|EAT11044.1| hypothetical protein RED65_14392 [Oceanobacter sp. RED65]
Length = 182
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q++ R LK+ + TG +A +T+ +Y +GL+ + ++ D + +D L D L
Sbjct: 34 QDQFRALKLRNLHTGERADITYWEQGEYLIDGLADIFLMMRDHRENEVASLDLALIDQLH 93
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+Q I ++SGYR+ +TN L IA++S H++GKA+DFYIPG++ R ++K
Sbjct: 94 HVQSKLETNREIMLVSGYRSPKTNDDLRHAQDGIAQESLHMMGKALDFYIPGINHRHVHK 153
Query: 173 IAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+ + GGV YY K F+H+D GR R W
Sbjct: 154 ATLAVSTGGVHYYRKSGFIHLDTGRKRRW 182
>gi|307249326|ref|ZP_07531320.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858620|gb|EFM90682.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 184
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
LL L+ ++TG TF GS + + L +LN L+ D H+ Q +DP LF
Sbjct: 31 LLSTPTPLALRFRNINTGDTYAATFSNGSLSSGD-LGKLNYLMRDRHTNQVKRIDPMLFV 89
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
L +IQQ + +LSGYR+ +TN + R R +A S H+ G+AVDF I GV L
Sbjct: 90 KLNQIQQRLGFRNAEVLVLSGYRSAQTNARMHRTRRGVASNSYHIRGQAVDFRISGVPLA 149
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
L A L GGVGYY S F+H+D G VR+W
Sbjct: 150 KLKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|165975578|ref|YP_001651171.1| hypothetical protein APJL_0123 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149393|ref|YP_001967918.1| hypothetical protein APP7_0124 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249826|ref|ZP_07336030.1| hypothetical protein APP6_1234 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251946|ref|ZP_07338117.1| hypothetical protein APP2_0273 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307244930|ref|ZP_07527027.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247105|ref|ZP_07529157.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307251649|ref|ZP_07533554.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307253884|ref|ZP_07535736.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307256147|ref|ZP_07537934.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258338|ref|ZP_07540079.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307262709|ref|ZP_07544337.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|165875679|gb|ABY68727.1| hypothetical protein APJL_0123 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189914524|gb|ACE60776.1| hypothetical protein APP7_0124 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649376|gb|EFL79561.1| hypothetical protein APP2_0273 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651393|gb|EFL81545.1| hypothetical protein APP6_1234 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854095|gb|EFM86303.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856354|gb|EFM88505.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306860846|gb|EFM92854.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863088|gb|EFM95030.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865328|gb|EFM97224.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867522|gb|EFM99369.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306871964|gb|EFN03680.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 184
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
LL L+ ++TG TF GS + + L +LN L+ D H+ Q +DP LF
Sbjct: 31 LLSTPTPLALRFRNINTGDTYAATFSNGSLSSGD-LGKLNYLMRDRHTNQVKRIDPMLFV 89
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
L +IQQ + +LSGYR+ +TN + R R +A S H+ G+AVDF I GV L
Sbjct: 90 KLNQIQQRLGFRNAEVLVLSGYRSAQTNARMHRTRRGVASNSYHIRGQAVDFRISGVPLA 149
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
L A L GGVGYY S F+H+D G VR+W
Sbjct: 150 KLKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|23013109|ref|ZP_00053051.1| COG3108: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 182
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + +Y TG + +Y + ++Q++R L D + Q MDP+L D + +Q+
Sbjct: 38 RQIHLYNTHTGESLKSIYWAEGRYQTKSIAQISRFLRDHRNGQVHPMDPKLLDMMNSVQR 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I+I+ GYR+ TN +++ + +A +S H GKAVD +PG + R + K A+
Sbjct: 98 KVGAKGPIHIICGYRSPATNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHVGKAALS 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVG Y S F+HID GRVR+W
Sbjct: 158 LKAGGVGMYPESDFVHIDTGRVRTW 182
>gi|257465087|ref|ZP_05629458.1| hypothetical protein AM202_01160 [Actinobacillus minor 202]
gi|257450747|gb|EEV24790.1| hypothetical protein AM202_01160 [Actinobacillus minor 202]
Length = 185
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L+ V+TG V F G + + LSQLN L+ D H+ Q +DP LF L ++QQ
Sbjct: 39 ALRFRNVNTGDTHAVKFSGGGLASAD-LSQLNYLMRDRHTGQVKRIDPNLFVKLNQLQQR 97
Query: 118 FSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I +LSGYR+ +TN L R +R +A S H+ G+A+DF + GV L + A
Sbjct: 98 LGFRNAEILVLSGYRSAKTNAALRRNHRGVASNSFHIRGQAIDFQVSGVPLSKVKAAAES 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+H+D G VR+W
Sbjct: 158 LHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|54309517|ref|YP_130537.1| hypothetical protein PBPRA2350 [Photobacterium profundum SS9]
gi|46913953|emb|CAG20735.1| hypothetical outer membrane protein [Photobacterium profundum SS9]
Length = 182
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + + + TG F G Y + L +++ + D+ + MD +LFD + EIQ
Sbjct: 39 RKISLCNIHTGEDIDSEFFNGESYIKTELKRIDNICRDFRQNEVAKMDKRLFDAITEIQA 98
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I+SGYR+ TNKML ++ +A KS H+ G+A+DF + GVSL + K AI
Sbjct: 99 NLGHKGQVRIISGYRSPATNKMLQKKG-GVATKSYHMKGQAIDFNLEGVSLSKVRKAAID 157
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
L+ GGVGYY K F+HID G VR W
Sbjct: 158 LQLGGVGYYPKSNFVHIDTGPVRRW 182
>gi|330445734|ref|ZP_08309386.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489925|dbj|GAA03883.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 185
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R + I + TG + + G Y + +++ + D+ + +D +L+D + +I
Sbjct: 37 DPRNMLIRNLHTGEELETKYFNGKTYVGSAVRKIDHICRDFRQNEVARIDRRLYDAISQI 96
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q Y Y+ ++SGYR+ +TNKML++R+ +A+KS H+ +A+DF + GV L + K A
Sbjct: 97 QTYVGHEGYVQLISGYRSPKTNKMLAKRSGGVAKKSYHMTAQAIDFNLEGVPLSKIRKAA 156
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ L GGVGYY S+F+HID G VR+W
Sbjct: 157 MDLNIGGVGYYPGSQFVHIDTGPVRNW 183
>gi|167645746|ref|YP_001683409.1| hypothetical protein Caul_1782 [Caulobacter sp. K31]
gi|167348176|gb|ABZ70911.1| protein of unknown function DUF882 [Caulobacter sp. K31]
Length = 225
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 57 RTLKIYVVSTGSK-AIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
R LK++ + T K V F++G +Y + + L+++L D+ + M P+LFD L ++
Sbjct: 78 RWLKLHNIHTQEKLEAVYFEKG-EYVPDAVQALDKVLRDYRTGDVYSMHPELFDTLADLA 136
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ + ++SGYR+ +TN ML R+ ++A++S H+ GKA+D Y+ V+L + A+
Sbjct: 137 RKTETKAHFQVISGYRSPKTNAMLHERSGQVAKRSLHMDGKAIDIYLEDVALDRVRAAAL 196
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
+ RGGVGYY S F+H+DVG VR W
Sbjct: 197 DVGRGGVGYYPVSNFVHVDVGPVRRW 222
>gi|90414499|ref|ZP_01222474.1| hypothetical outer membrane protein [Photobacterium profundum 3TCK]
gi|90324407|gb|EAS40969.1| hypothetical outer membrane protein [Photobacterium profundum 3TCK]
Length = 182
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + + + TG F G Y + L +++ + D+ + MD +LFD + EIQ
Sbjct: 39 RKISLCNIHTGEDIDSEFFNGESYIKTELKRIDNICRDFRRNEVAKMDKRLFDAITEIQA 98
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I+SGYR+ TNKML ++ +A KS H+ G+A+DF + GVSL + K AI
Sbjct: 99 NLGHKGQVRIISGYRSPATNKMLQKKG-GVATKSYHMKGQAIDFNLEGVSLSKVRKAAID 157
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
L+ GGVGYY K F+HID G VR W
Sbjct: 158 LQLGGVGYYPKSDFVHIDTGPVRRW 182
>gi|254463068|ref|ZP_05076484.1| hypothetical outer membrane protein [Rhodobacterales bacterium
HTCC2083]
gi|206679657|gb|EDZ44144.1| hypothetical outer membrane protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 227
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE- 122
+TG K ++ + ++ +SQLN L DW + ++D + L ++ ++
Sbjct: 86 ANTGEKMPMSLQEKGGLRKKQVSQLNHFLRDWRQNEIKEIDGAVLKTLIDVCTNYAPKSG 145
Query: 123 --YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
+ I SGYR+++TN ML R + K+AR+S H+ G+A+DF +P VS+R L K A + G
Sbjct: 146 ALEVRITSGYRSKKTNNMLRRSSSKVARRSLHIQGRAIDFSLPNVSIRELSKAAKNICPG 205
Query: 181 GVGYYSKFLHIDVGRVRSW 199
GVG YS F+HID G R+W
Sbjct: 206 GVGTYSTFVHIDSGPKRAW 224
>gi|307825668|ref|ZP_07655885.1| protein of unknown function DUF882 [Methylobacter tundripaludum
SV96]
gi|307733245|gb|EFO04105.1| protein of unknown function DUF882 [Methylobacter tundripaludum
SV96]
Length = 234
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
+ L + TG + +T+ +Y ++ L ++N L D+H +DP L D L++++
Sbjct: 88 KMLAFHNTHTGDQLNLTYFEEGRYIKDALHEINHLFRDYHDGTVHPIDPALLDQLYDLKH 147
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
V + +I+SGYR+ TN L + + +A+ S H+ G+A+D I G+ R + A+
Sbjct: 148 TLEVRKPFHIVSGYRSPATNADLRKHSDGVAKNSLHMEGRAIDIRIEGLDTRRIRNAALA 207
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSWT 200
++RGGVGYY S F+H+D G +R+W
Sbjct: 208 MQRGGVGYYGRSDFVHLDTGSIRTWA 233
>gi|89073968|ref|ZP_01160474.1| hypothetical outer membrane protein [Photobacterium sp. SKA34]
gi|89050296|gb|EAR55800.1| hypothetical outer membrane protein [Photobacterium sp. SKA34]
Length = 185
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R L I + T + + G Y + Q++ L D+ + +D +L+D + +I
Sbjct: 37 DPRNLLIRNLHTSEELETKYFNGKTYVGSAVRQIDHLCRDFRQNEVARIDRRLYDAISQI 96
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q Y Y + SGYR+ +TNKML++R+ +A+KS H+ +A+DF + GV L + + A
Sbjct: 97 QAYLGHEGYAQLFSGYRSPKTNKMLAKRSGGVAKKSYHMKAQAIDFNLEGVPLSKIRQAA 156
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ LK GGVGYY S+F+HID G VR+W
Sbjct: 157 MDLKIGGVGYYPGSQFVHIDTGPVRNW 183
>gi|299135938|ref|ZP_07029122.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX8]
gi|298602062|gb|EFI58216.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX8]
Length = 230
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
LK+Y + TG V ++ G+ Y + +LN L D ++ DP FD L +
Sbjct: 77 LKLYHLHTGESIDVVYRIGNVYIPAAMEKLNHFLRDHRTEDESHYDPHEFDLLHNLLARL 136
Query: 119 SVPE-YIYILSGYRTQETNKMLS--RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
P+ I ++ GYRT E+N+ L + +A+ SQH+ KA+D +PG+ R L A+
Sbjct: 137 GRPQGMIDVVCGYRTPESNEYLRTLSADTGVAKHSQHMEAKAIDIRVPGIRTRRLRDAAL 196
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSWT 200
L+ GGVGYY S+F+H+DVG VR WT
Sbjct: 197 SLQAGGVGYYPISQFVHVDVGPVRHWT 223
>gi|83311305|ref|YP_421569.1| hypothetical protein amb2206 [Magnetospirillum magneticum AMB-1]
gi|82946146|dbj|BAE51010.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 151
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + +Y TG + Y + ++Q++R L D + Q +DP+LFD + +Q+
Sbjct: 7 RQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDLMNSVQR 66
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I+I+ GYR+ TN +++ + +A +S H GKAVD +PG + R + + A+
Sbjct: 67 KVGGKGPIHIICGYRSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHVGRAALS 126
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVG Y S F+HID GRVR+W
Sbjct: 127 LKAGGVGMYPESDFVHIDTGRVRTW 151
>gi|258593539|emb|CBE69880.1| conserved exported protein of unknown function [NC10 bacterium
'Dutch sediment']
Length = 188
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 91/144 (63%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGS-QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
+ +Y T + VT+++ S +Y+ + LS +++LL ++ + MD + +F+ + +
Sbjct: 45 IALYNTHTHERLDVTYRQPSGEYDADALSAIDQLLRCHYTNKVAKMDVGVIEFVNALDKR 104
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+++SG+R+ E NK+L +R+R++AR S H GKA+D IPGV L ++ K+A+ L
Sbjct: 105 LGGGNEIHVISGFRSPEYNKLLRQRSRRVARHSLHQSGKAIDLRIPGVGLNAIRKMALDL 164
Query: 178 KRGGVGYYSK--FLHIDVGRVRSW 199
+ GGVGYY + F+H+D G+ R W
Sbjct: 165 RSGGVGYYPRRGFIHLDSGQFRHW 188
>gi|260433725|ref|ZP_05787696.1| Tat [Silicibacter lacuscaerulensis ITI-1157]
gi|260417553|gb|EEX10812.1| Tat [Silicibacter lacuscaerulensis ITI-1157]
Length = 189
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + +Y ++ + ++N + DW + QS ++D + D +
Sbjct: 41 DIRRIRMYSGRTGERIDMIYWVDGEYIKDAVKEINHFMRDWRTDQSTNIDLRTIDIMAAS 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML RR+R +A+ S H+ G+A D + S+ + K A
Sbjct: 101 HNLLEVNEPYMLLSGYRSPQTNAMLRRRSRGVAKNSLHMKGQAADLRLASRSVSQMAKAA 160
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + GGVG Y S F+H+D G VRSW
Sbjct: 161 MACRAGGVGQYYRSNFVHMDCGDVRSW 187
>gi|149911943|ref|ZP_01900541.1| hypothetical protein PE36_11042 [Moritella sp. PE36]
gi|149804990|gb|EDM65019.1| hypothetical protein PE36_11042 [Moritella sp. PE36]
Length = 170
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+ L+ Y + T ++ F Y Q L + LL D S MD +L++ L+++
Sbjct: 25 TKKLEFYNIHTRERSQGDFWIDGLYQQGTLENFSHLLRDHRQNLSAPMDKRLYELLYQLN 84
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ +V + +++SGYR+ +TN+ML+ ++ +A KS H+ G A+D IP V + L AI
Sbjct: 85 KTLNVSDEYHVISGYRSPKTNEMLASKSSAVAIKSYHMRGMAIDIAIPDVKISHLRDAAI 144
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
LK GGVGYY K F+H+D GRVR W
Sbjct: 145 SLKLGGVGYYPKSGFIHVDTGRVRIW 170
>gi|188995994|ref|YP_001930245.1| protein of unknown function DUF882 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931061|gb|ACD65691.1| protein of unknown function DUF882 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 179
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R L Y TG F +YN+EGL + +L D+ + + ++D +L D L+ +
Sbjct: 32 QARILYFYNTHTGEFLKEIFYENGRYNEEGLKNIFYILRDFRTNEIAEIDIKLIDTLYIL 91
Query: 115 QQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ V I I+SGYR+ +TN +L + +A+ S H+ GKA+D I GV L L
Sbjct: 92 TKTLEVNNRPINIISGYRSPKTNNLLRELSSGVAKNSLHMQGKAIDINISGVPLHILRDA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID GR+R W
Sbjct: 152 AISLKAGGVGYYLSSNFVHIDTGRIRYW 179
>gi|325578155|ref|ZP_08148290.1| hypothetical protein HMPREF9417_1031 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159891|gb|EGC72020.1| hypothetical protein HMPREF9417_1031 [Haemophilus parainfluenzae
ATCC 33392]
Length = 186
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L Y V+T + F + +N+ L +L+ + D + Q MDP LF
Sbjct: 31 MVSTPKPRILSFYNVNTNERLSGEFSATTGFNRSMLGKLDYFMRDRRTDQVHRMDPSLFM 90
Query: 110 FLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+++Q + I ++ GYR+ TN M R++R +A S H+ G+A+DF IPGV L
Sbjct: 91 KFYQLQSDLGLRTAQIDVICGYRSAATNAMRRRQSRDVASNSYHIKGQAIDFKIPGVPLA 150
Query: 169 SLYKIAIRLKRGGVGY--YSKFLHIDVGRVRSW 199
L + A L GGVGY YS F+H+D G VR+W
Sbjct: 151 RLRQAAENLDSGGVGYYPYSNFIHVDTGPVRTW 183
>gi|219872271|ref|YP_002476646.1| hypothetical protein HAPS_2268 [Haemophilus parasuis SH0165]
gi|219692475|gb|ACL33698.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 185
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+L P+L+ H +S L+ L++ +STG + + + + L++LN +
Sbjct: 22 TLLPNLV--HAVTSTPKPLI-------LRLKRLSTGETLSANYHT-NGFAAKDLNKLNHI 71
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNRKIARKS 150
+ D H + +DP+LF L +IQ + I I+SGYR+ +TN L RR+R +A S
Sbjct: 72 MRDVHINRIKRIDPKLFVKLTQIQARLGLRKSEILIVSGYRSAQTNARLRRRSRGVASNS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+LGKA+DF I GV L + A L GGVGYY S F+H+D G VR+W
Sbjct: 132 YHILGKAIDFRIEGVPLARIKAAAESLNNGGVGYYPHSNFVHVDTGPVRTW 182
>gi|32034589|ref|ZP_00134745.1| COG3108: Uncharacterized protein conserved in bacteria
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207610|ref|YP_001052835.1| hypothetical protein APL_0122 [Actinobacillus pleuropneumoniae L20]
gi|307260579|ref|ZP_07542271.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|126096402|gb|ABN73230.1| hypothetical protein APL_0122 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306869656|gb|EFN01441.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 184
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
LL L+ ++TG TF GS + + L +LN L+ D ++ Q +DP LF
Sbjct: 31 LLSTPTPLALRFRNINTGDTYAATFSNGSLSSGD-LGKLNYLMRDRYTNQVKRIDPMLFV 89
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
L +IQQ + +LSGYR+ +TN + R R +A S H+ G+AVDF I GV L
Sbjct: 90 KLNQIQQRLGFRNAEVLVLSGYRSAQTNARMHRTRRGVASNSYHIRGQAVDFRISGVPLA 149
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
L A L GGVGYY S F+H+D G VR+W
Sbjct: 150 KLKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|94967236|ref|YP_589284.1| hypothetical protein Acid345_0205 [Candidatus Koribacter versatilis
Ellin345]
gi|94549286|gb|ABF39210.1| protein of unknown function DUF882 [Candidatus Koribacter
versatilis Ellin345]
Length = 186
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
L+++ TG + + ++RG QY E L QL+ L D + DP++FD L ++
Sbjct: 43 LRLFHTHTGERIDIVYRRGDQYLPEALDQLDHYLRDHRTGTVHHYDPRVFDLLHDLTADL 102
Query: 119 SVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
P+ + ++ GYRT +N+ L +A S H+ A+D IPGV L A+ +
Sbjct: 103 GEPDTEVNVICGYRTPWSNEYLRTHGHGVASHSLHMQALAIDIRIPGVKTSDLRDAALAM 162
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
RGGVGYY S F+H+DVGR R W
Sbjct: 163 HRGGVGYYSSSDFVHVDVGRERRW 186
>gi|113866567|ref|YP_725056.1| hypothetical protein H16_A0538 [Ralstonia eutropha H16]
gi|113525343|emb|CAJ91688.1| Uncharacterized protein conserved in bacteria [Ralstonia eutropha
H16]
Length = 195
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL TG + + + G ++ + L+ LN L D +S + +DPQLFD L+++
Sbjct: 48 DARTLAFDHTHTGERVSLVYAVGDRFVPDALTTLNGFLRDHYSGKVGMIDPQLFDLLFQV 107
Query: 115 QQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
++ + ++SGYR+ TN L + R +AR S H+ GKA+D + GV L +
Sbjct: 108 RRELGTDQPFQVISGYRSPTTNSRLRNTRGGGVARHSLHMDGKAIDIRLAGVPLADVRDA 167
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A L+ GGVG+Y +F+HID GRVR W
Sbjct: 168 AKSLQGGGVGFYESDQFVHIDTGRVRYW 195
>gi|84514824|ref|ZP_01002187.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Loktanella vestfoldensis SKA53]
gi|84510983|gb|EAQ07437.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Loktanella vestfoldensis SKA53]
Length = 167
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 87 QLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY---IYILSGYRTQETNKMLSRRN 143
+LN + DW Q MDP + EI + F+ P + + SGYR+Q TN++L +R+
Sbjct: 50 RLNHFMRDWRQDQVKVMDPSVVQDFLEICRAFATPGNPTDVKVNSGYRSQRTNELLRQRS 109
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSWT 200
R +A S H+ G+A+DF +P VS R L A + RGGVG YS F+HID GR R W+
Sbjct: 110 RNVAINSLHMEGRAIDFALPKVSQRQLGATANAICRGGVGTYSTFIHIDSGRNRHWS 166
>gi|332525151|ref|ZP_08401328.1| hypothetical protein RBXJA2T_04998 [Rubrivivax benzoatilyticus JA2]
gi|332108437|gb|EGJ09661.1| hypothetical protein RBXJA2T_04998 [Rubrivivax benzoatilyticus JA2]
Length = 185
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + TG + + SQ+ L LNR L D ++ +DPQLF+ L ++
Sbjct: 39 RALAMNHTHTGESLDLVYAMDSQFVPAALGTLNRFLRDHYTGSVGLIDPQLFELLHRVRG 98
Query: 117 YFSVPEYIY-ILSGYRTQETNKMLSR-RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+Y ++SGYR ETN L R +AR+S H+ G+A+D + GV L+ L A
Sbjct: 99 LLGTESAVYEVISGYRCPETNDRLRHTRGGGVARRSLHMDGRAIDVRLKGVPLKELRDAA 158
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ L+ GGVGYY +F+H+D GRVR W
Sbjct: 159 LSLQAGGVGYYEQERFVHLDTGRVRHW 185
>gi|301156057|emb|CBW15528.1| conserved protein [Haemophilus parainfluenzae T3T1]
Length = 186
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L Y V+T + F + + + L +L+ + D + Q MDP LF
Sbjct: 31 MVSTPKPRILSFYNVNTNERLSGEFSATTGFTRSLLGKLDYFMRDRRTDQVRRMDPNLFM 90
Query: 110 FLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ +Q + I ++ GYR+ TN M R++R +A S H+ G+A+DF IPGVSL
Sbjct: 91 KFYHLQSDLGLRTAQIDVICGYRSAATNAMRHRQSRGVASNSYHIKGQAIDFRIPGVSLA 150
Query: 169 SLYKIAIRLKRGGVGY--YSKFLHIDVGRVRSW 199
L + A L+ GGVGY YS F+H+D G VR+W
Sbjct: 151 RLRQAAENLENGGVGYYPYSNFIHVDTGPVRTW 183
>gi|251792220|ref|YP_003006941.1| twin-arginine translocation pathway signal [Aggregatibacter
aphrophilus NJ8700]
gi|247533608|gb|ACS96854.1| twin-arginine translocation pathway signal [Aggregatibacter
aphrophilus NJ8700]
Length = 186
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L ++TG K F G ++ L L+ L D + Q MDPQLF + +QQ
Sbjct: 38 RMLSFRNINTGEKLSAEFAFGRGFSVNTLRLLDHFLRDKRTNQVHKMDPQLFTKFYRVQQ 97
Query: 117 YFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+ GYR+ +N + RR+R +A S H+ G+A+DF I GV L L
Sbjct: 98 QLGLRNTEIQIICGYRSAASNAAMHRRSRGVASNSYHIRGQAIDFRIDGVPLAKLRNTVE 157
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSWT 200
L+ GGVGYY S F+H+D G VR+W
Sbjct: 158 SLQDGGVGYYPRSNFVHMDTGPVRTWN 184
>gi|297568522|ref|YP_003689866.1| protein of unknown function DUF882 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924437|gb|ADH85247.1| protein of unknown function DUF882 [Desulfurivibrio alkaliphilus
AHT2]
Length = 186
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 55 EVRTLKIYVVSTGSKAIVTFK--RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
R L +Y + TG + +TF+ RG+ L+++NRLL H+ + +DP+ D+L
Sbjct: 39 PARRLALYHLHTGERLTITFRDPRGNHI-PSALAEINRLLRCHHTGEIHPIDPETIDYLS 97
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+ +I+SGYR+ N+ L R R++A +S H+ G+A+D +P + +L +
Sbjct: 98 LVDSKLGGGNEFHIISGYRSPAYNRRLLREGRQVAPRSLHLTGRAIDVRLPKIGAATLRR 157
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+H+D G RSW
Sbjct: 158 AALDLKLGGVGYYPRSGFVHLDSGPFRSW 186
>gi|16125759|ref|NP_420323.1| hypothetical protein CC_1512 [Caulobacter crescentus CB15]
gi|13422891|gb|AAK23491.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 216
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R + ++ V TG K + Y + +S L+++L D+ + + +D L+D L +I
Sbjct: 67 DPRWVHLHNVHTGEKLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLYDLLDQI 126
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ ++SGYR+ TN++LS+R+ ++A+KS H+ GKA+D ++ V L+ + A
Sbjct: 127 ARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAKKSLHMDGKAMDIFLEDVELKHVRAAA 186
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+ L GGVGYY S F+H+DVG VR WT
Sbjct: 187 LDLSVGGVGYYPTSNFVHVDVGPVRKWT 214
>gi|171056701|ref|YP_001789050.1| hypothetical protein Lcho_0009 [Leptothrix cholodnii SP-6]
gi|170774146|gb|ACB32285.1| protein of unknown function DUF882 [Leptothrix cholodnii SP-6]
Length = 205
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
R L ++ TG + + + +Y E L LN L D +S Q + P LFD L +
Sbjct: 58 ARELALHHTHTGERIALAYAVDDRYVPEALGALNHFLRDHYSGQVGTIAPPLFDQLHRLH 117
Query: 116 QYFSVPEYIYILSGYRTQETNKM--LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
Q + ++SGYR ETN L+R +A++S H+ G+A+D +PGV L L
Sbjct: 118 QVLGAAQPFQVISGYRCPETNNTLRLTRGGGGVAKRSLHMDGRAIDVRLPGVPLADLRDA 177
Query: 174 AIRLKRGGVGYYS--KFLHIDVGRVRSW 199
A+ L GGVGYY +F+H+D G VR W
Sbjct: 178 ALSLGAGGVGYYPGQQFVHLDNGPVRRW 205
>gi|119383983|ref|YP_915039.1| hypothetical protein Pden_1238 [Paracoccus denitrificans PD1222]
gi|119373750|gb|ABL69343.1| protein of unknown function DUF882 [Paracoccus denitrificans
PD1222]
Length = 186
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
L ++R +++Y TG + +Y ++ L+++N + DW + Q+I DP+ D
Sbjct: 33 LRGAGDIRRIRMYSGRTGESIDTVYWVEGKYIRDALNEINIFMRDWRTGQAIGFDPRAID 92
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
+ E +LSGYR+ +TN ML R+ +AR S H++GKA D + S+
Sbjct: 93 IAAASHRLLQTNEPYMMLSGYRSPQTNAMLRSRSSGVARNSLHMVGKAADLRLKSRSVSQ 152
Query: 170 LYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+YK A GGVG YS+ F+H+D G +R W
Sbjct: 153 MYKAAAACNAGGVGKYSRSNFVHMDCGPIRHW 184
>gi|322433931|ref|YP_004216143.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX9]
gi|321161658|gb|ADW67363.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX9]
Length = 204
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
++ + L E L ++ + TG V ++ G Y E +++LN L D +
Sbjct: 35 NTANGTHTLASAEQYVLHLHHLHTGESLDVVYRIGDTYVPEAMAKLNYFLRDHRTNDVSS 94
Query: 103 MDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVD 159
DP+ FD L E+ + I I+ GYRT +N L R+ +A+ SQH+L KA+D
Sbjct: 95 YDPKEFDTLHELMAKLGRGNQTIDIVCGYRTPWSNNFLRTRSSVTGVAQHSQHMLAKAID 154
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+PGV R+L +A+ L GGVGYY S+F+H+DVG VR W
Sbjct: 155 IRVPGVQTRTLRDMALSLHAGGVGYYPVSQFVHVDVGPVRQWA 197
>gi|221234517|ref|YP_002516953.1| M15 superfamily membrane peptidase [Caulobacter crescentus NA1000]
gi|220963689|gb|ACL95045.1| M15 superfamily membrane peptidase [Caulobacter crescentus NA1000]
Length = 151
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R + ++ V TG K + Y + +S L+++L D+ + + +D L+D L +I
Sbjct: 2 DPRWVHLHNVHTGEKLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLYDLLDQI 61
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ ++SGYR+ TN++LS+R+ ++A+KS H+ GKA+D ++ V L+ + A
Sbjct: 62 ARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAKKSLHMDGKAMDIFLEDVELKHVRAAA 121
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+ L GGVGYY S F+H+DVG VR WT
Sbjct: 122 LDLSVGGVGYYPTSNFVHVDVGPVRKWT 149
>gi|322515093|ref|ZP_08068100.1| peptidase M15 superfamily protein [Actinobacillus ureae ATCC 25976]
gi|322118899|gb|EFX91081.1| peptidase M15 superfamily protein [Actinobacillus ureae ATCC 25976]
Length = 215
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L+ ++TG F G + L QLN L+ D H+ Q +DP LF L +IQQ
Sbjct: 70 ALRFRNINTGDTYAAKFH-GGHLSVADLHQLNHLMRDRHTNQIKRIDPMLFVKLNQIQQR 128
Query: 118 FSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I +LSGYR+ +TN + R R +A S H+ G+AVDF + GV L + A
Sbjct: 129 LGFRNAEIQVLSGYRSAKTNARMHRTQRGVASNSYHIRGQAVDFRVSGVPLAKVRAAAES 188
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+H+D G VR+W
Sbjct: 189 LHNGGVGYYPRSNFVHVDTGPVRTW 213
>gi|94312744|ref|YP_585953.1| twin-arginine translocation (TAT) pathway signal protein
[Cupriavidus metallidurans CH34]
gi|93356596|gb|ABF10684.1| twin-arginine translocation (TAT) pathway signal protein
[Cupriavidus metallidurans CH34]
Length = 203
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
+++ S + R+L + TG + + GS+ + LNR L D +S
Sbjct: 43 ENTPDSGPGNPPNARSLSFHHTHTGENISLVYAMGSEVLPQAQLALNRFLRDHYSGSVGA 102
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML-SRRNRKIARKSQHVLGKAVDFY 161
+DPQLF L+ +++ ++SGYR+ TN L + R +A+ S H+ G A+D
Sbjct: 103 IDPQLFGLLFSLRRELETDTPFQVISGYRSPATNTRLRNTRGGGVAKHSLHMDGMAIDIR 162
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+PGVSL L A LK GGVG+Y + F+H+D GRVR W
Sbjct: 163 LPGVSLADLRDAATSLKIGGVGFYQQEDFVHVDTGRVRHW 202
>gi|77917995|ref|YP_355810.1| hypothetical protein Pcar_0380 [Pelobacter carbinolicus DSM 2380]
gi|77544078|gb|ABA87640.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 178
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 51 LDQEEVRTLKIYVVSTGS--KAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
L ++ R+L +Y TG + IV +++GS Y + L Q+N LL D + ++ +DP L
Sbjct: 27 LVNKDHRSLSLYNTHTGEHLRNIVYWEKGS-YQHDSLQQINHLLRDHRTGETKAIDPNLL 85
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D L E+ I+SGYR+ TN+ L +R +A KS H+ G+A+D + G L
Sbjct: 86 DLLHELHDRIPADTPFEIISGYRSPATNRQLQAHSRGVATKSLHMAGQAIDIRLRGYPLA 145
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+L K A +KRGGVGYY S F+HID GRVR W
Sbjct: 146 NLRKTATAMKRGGVGYYPRSNFVHIDTGRVRYW 178
>gi|260768292|ref|ZP_05877226.1| lipoprotein putative [Vibrio furnissii CIP 102972]
gi|260616322|gb|EEX41507.1| lipoprotein putative [Vibrio furnissii CIP 102972]
Length = 102
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD +LFD + IQ + I+SGYR+ TN+ML ++ +A+KS H+LG+A+DF +
Sbjct: 1 MDKKLFDQISRIQAVLGTEAEVQIISGYRSPATNEMLRGKSSGVAKKSFHMLGQAIDFRL 60
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GVSL+ +++ A+ LK GGVGYY S+F+HID G VR W
Sbjct: 61 DGVSLKQIHEAALSLKAGGVGYYPKSQFVHIDTGPVRQW 99
>gi|322420047|ref|YP_004199270.1| hypothetical protein GM18_2541 [Geobacter sp. M18]
gi|320126434|gb|ADW13994.1| protein of unknown function DUF882 [Geobacter sp. M18]
Length = 188
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y V+ + VT++ +Y E L LN + H+ Q+ +MD ++ ++L +
Sbjct: 45 LSLYNVNCNERLTVTYRNSLGEYCDEALQALNWIFRCHHTDQTTEMDLRVVEYLNRLDNS 104
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I I+SGYR+ E N L R++ +A+ S H+ G A+D IPG L + + AI L
Sbjct: 105 LGGNNEIRIISGYRSPEYNAQLRSRSKGVAKDSLHMKGMAIDLAIPGFGLNQIRRSAIAL 164
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
GGVGYY S F+HID G R+W
Sbjct: 165 AAGGVGYYPQSGFVHIDAGHFRTW 188
>gi|218659673|ref|ZP_03515603.1| hypothetical protein RetlI_08470 [Rhizobium etli IE4771]
Length = 169
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 16/126 (12%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P S + D R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 22 VSSPVFVSTP--------SQAAGD------TRSLKLYFIHTGEKAVITYKRNGKFDPKGL 67
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+RK
Sbjct: 68 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPATNEMLRGRSRK 127
Query: 146 --IARK 149
+ RK
Sbjct: 128 SGVCRK 133
>gi|240948090|ref|ZP_04752500.1| hypothetical protein AM305_04808 [Actinobacillus minor NM305]
gi|240297570|gb|EER48062.1| hypothetical protein AM305_04808 [Actinobacillus minor NM305]
Length = 185
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L+ ++TG V F G+ + + L +L+ L+ D H+ Q +DP LF L +QQ
Sbjct: 39 ALRFRNINTGDTHAVKFNGGNLASAD-LKRLDYLMRDRHTGQIKHIDPNLFVKLNMLQQR 97
Query: 118 FSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I +LSGYR+ +TN L R +R +A S H+ G+AVDF I GV+L + A
Sbjct: 98 LGFRNAEILVLSGYRSAKTNAALRRTHRGVASNSFHIRGQAVDFQISGVALNKVKTAAES 157
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+H+D G VR+W
Sbjct: 158 LHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|325981932|ref|YP_004294334.1| hypothetical protein NAL212_1269 [Nitrosomonas sp. AL212]
gi|325531451|gb|ADZ26172.1| protein of unknown function DUF882 [Nitrosomonas sp. AL212]
Length = 197
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
+ L + TG + TF +Y EG+ +N++L D + +DP LFDFL +Q
Sbjct: 51 KKLSFLNLHTGERTRATFWANGRYIPEGMRAINQVLRDHRTGDRYKIDPTLFDFLHLLQH 110
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ +++S YR+ TN L+ ++ +A+ S H GKA+D +PG L L A+
Sbjct: 111 KLRTHQEFHVISAYRSPATNAKLAAQSGGVAKNSLHTHGKAIDIRLPGRKLSDLRSAALS 170
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S F+H+D G R W
Sbjct: 171 LQIGGVGYYPSSNFVHLDTGNYRFW 195
>gi|145641086|ref|ZP_01796667.1| hypothetical protein CGSHiR3021_08451 [Haemophilus influenzae
R3021]
gi|148825794|ref|YP_001290547.1| hypothetical protein CGSHiEE_03725 [Haemophilus influenzae PittEE]
gi|145274247|gb|EDK14112.1| hypothetical protein CGSHiR3021_08451 [Haemophilus influenzae
22.4-21]
gi|148715954|gb|ABQ98164.1| hypothetical protein CGSHiEE_03725 [Haemophilus influenzae PittEE]
Length = 186
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFQ 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSAATNAMRRRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|145637695|ref|ZP_01793348.1| hypothetical protein CGSHiHH_01951 [Haemophilus influenzae PittHH]
gi|145269097|gb|EDK09047.1| hypothetical protein CGSHiHH_01951 [Haemophilus influenzae PittHH]
Length = 186
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFQ 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|145629245|ref|ZP_01785044.1| hypothetical protein CGSHi22121_10595 [Haemophilus influenzae
22.1-21]
gi|260581260|ref|ZP_05849078.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260582629|ref|ZP_05850418.1| tat pathway signal sequence domain/peptidase M15 family protein
[Haemophilus influenzae NT127]
gi|144978748|gb|EDJ88471.1| hypothetical protein CGSHi22121_10595 [Haemophilus influenzae
22.1-21]
gi|260092087|gb|EEW76032.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260094301|gb|EEW78200.1| tat pathway signal sequence domain/peptidase M15 family protein
[Haemophilus influenzae NT127]
gi|309750757|gb|ADO80741.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
gi|309972940|gb|ADO96141.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 186
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFQ 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|145633342|ref|ZP_01789073.1| hypothetical protein CGSHi3655_03896 [Haemophilus influenzae 3655]
gi|229846897|ref|ZP_04467004.1| hypothetical protein CGSHi7P49H1_02713 [Haemophilus influenzae
7P49H1]
gi|144986188|gb|EDJ92778.1| hypothetical protein CGSHi3655_03896 [Haemophilus influenzae 3655]
gi|229810386|gb|EEP46105.1| hypothetical protein CGSHi7P49H1_02713 [Haemophilus influenzae
7P49H1]
Length = 186
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFH 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAQIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|145631484|ref|ZP_01787253.1| hypothetical protein CGSHi22421_02476 [Haemophilus influenzae
R3021]
gi|145634470|ref|ZP_01790180.1| hypothetical protein CGSHiAA_06754 [Haemophilus influenzae PittAA]
gi|144982914|gb|EDJ90427.1| hypothetical protein CGSHi22421_02476 [Haemophilus influenzae
R3021]
gi|145268450|gb|EDK08444.1| hypothetical protein CGSHiAA_06754 [Haemophilus influenzae PittAA]
Length = 186
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFH 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|145639177|ref|ZP_01794784.1| hypothetical protein CGSHiII_04044 [Haemophilus influenzae PittII]
gi|229845073|ref|ZP_04465209.1| hypothetical protein CGSHi6P18H1_00939 [Haemophilus influenzae
6P18H1]
gi|145271739|gb|EDK11649.1| hypothetical protein CGSHiII_04044 [Haemophilus influenzae PittII]
gi|229812045|gb|EEP47738.1| hypothetical protein CGSHi6P18H1_00939 [Haemophilus influenzae
6P18H1]
Length = 186
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFH 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSAATNAMRRRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|114332478|ref|YP_748700.1| twin-arginine translocation pathway signal [Nitrosomonas eutropha
C91]
gi|114309492|gb|ABI60735.1| Twin-arginine translocation pathway signal [Nitrosomonas eutropha
C91]
Length = 194
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
+ L + + TG + + +Y E L + ++L D S + +DP L D + +
Sbjct: 50 KRLSLLNLHTGERIRTAYWEQGKYIPEALQAIAKVLRDHRSGERHPIDPGLLDLIQHLHH 109
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ ++SGYR+ TN L+ ++ +A+KS H+ GKA+D +PGV L +L + A+
Sbjct: 110 KTGSSKEFQVISGYRSPATNATLAAKSHGVAKKSLHMQGKAIDIRLPGVPLNALRRAAMS 169
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
++ GGVGYY S F+H+D G VR W
Sbjct: 170 MRVGGVGYYPESNFIHVDTGNVRYW 194
>gi|68250267|ref|YP_249379.1| hypothetical protein NTHI1967 [Haemophilus influenzae 86-028NP]
gi|68058466|gb|AAX88719.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 186
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFH 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRDAEIEVICGYRSVATNAMRRRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|167855603|ref|ZP_02478363.1| hypothetical protein HPS_03651 [Haemophilus parasuis 29755]
gi|167853294|gb|EDS24548.1| hypothetical protein HPS_03651 [Haemophilus parasuis 29755]
Length = 186
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 14/172 (8%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+L P+L+ H +S L+ L++ +STG + + + + L++LN +
Sbjct: 22 TLLPNLV--HAVTSTPKPLI-------LRLKRLSTGETLSANYHT-NGFAAKDLNKLNHI 71
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNRKIA-RK 149
+ D H + +DP+LF L +IQ + I I+SGYR+ +TN L RR+R +A
Sbjct: 72 MRDVHINRIKRIDPKLFVKLTQIQARLGLRKSEILIVSGYRSAQTNARLRRRSRGVASNN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+LGKA+DF I GV L + A L GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHILGKAIDFRIEGVPLARIKAAAESLNNGGVGYYPHSNFVHVDTGPVRTW 183
>gi|254440342|ref|ZP_05053836.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198255788|gb|EDY80102.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 189
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R LK+Y TG + Y E ++++NR DW + Q++ +D + D
Sbjct: 41 DIRRLKMYSGRTGESIDTIYWIEGDYIPEAMTEMNRFFRDWRNGQTLQIDTRTIDIAAAT 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q + ++SGYR+ +TN ML + +AR S H+ G+A D + G S+ + + A
Sbjct: 101 QNLLDSSQPYTLISGYRSPQTNAMLRSNSSGVARNSLHLQGQAADLRMQGRSVSQMARAA 160
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
GGVG Y S F+HID G VRSW
Sbjct: 161 ASCNAGGVGRYSGSNFIHIDCGAVRSW 187
>gi|261211002|ref|ZP_05925292.1| lipoprotein putative [Vibrio sp. RC341]
gi|260839977|gb|EEX66577.1| lipoprotein putative [Vibrio sp. RC341]
Length = 102
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD LFD L EIQ ++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF +
Sbjct: 1 MDKVLFDQLSEIQFLLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRL 60
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GVSL+ + + AI L+ GGVGYY S+F+HID G VR W
Sbjct: 61 DGVSLKKIREAAISLQAGGVGYYPKSRFIHIDTGPVRQW 99
>gi|319776087|ref|YP_004138575.1| hypothetical protein HICON_14360 [Haemophilus influenzae F3047]
gi|329123251|ref|ZP_08251819.1| protein of hypothetical function DUF882 [Haemophilus aegyptius ATCC
11116]
gi|317450678|emb|CBY86898.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471460|gb|EGF16908.1| protein of hypothetical function DUF882 [Haemophilus aegyptius ATCC
11116]
Length = 186
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSAPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFH 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSVATNAMRRRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|319896896|ref|YP_004135091.1| hypothetical protein HIBPF05760 [Haemophilus influenzae F3031]
gi|317432400|emb|CBY80755.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 186
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFH 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I GV L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSVATNAMRRRQSRGVAKNSYHIKGKAIDFRIAGVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|261253178|ref|ZP_05945751.1| hypothetical protein VIA_003203 [Vibrio orientalis CIP 102891]
gi|260936569|gb|EEX92558.1| hypothetical protein VIA_003203 [Vibrio orientalis CIP 102891]
Length = 115
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
+N + D+ + MD +LFD + IQ+ V + I+SGYR+ TN+ L ++ +A
Sbjct: 1 MNHICRDFRRNEVHAMDKRLFDHISNIQKELGVEAEVQIISGYRSPATNEALRGKSSGVA 60
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+KS H+LG+A+DF + GV+L+ + IA LK GGVGYY S F+H+D G VR W
Sbjct: 61 KKSYHMLGQAIDFRLDGVNLKQVRDIARELKFGGVGYYPGSNFIHMDTGPVRYWA 115
>gi|209966190|ref|YP_002299105.1| hypothetical protein RC1_2925 [Rhodospirillum centenum SW]
gi|209959656|gb|ACJ00293.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 192
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY-- 123
+G +A V + Y+ + +N LL D ++ + +DP L DFL+++ +P
Sbjct: 52 SGERADVIYFHNGGYDPRAMESVNLLLRDRNTGEKAPIDPALMDFLFDLFYRTGLPPTTE 111
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+ +LSGYR+ +TN L + N + AR+S H+ GKA+DF +P + +L +IA ++RGG
Sbjct: 112 VQVLSGYRSPQTNAKLVKANSQAARESFHMQGKALDFRVPALPGPALAEIAKTMQRGGAA 171
Query: 184 YY--SKFLHIDVGRVRSW 199
+Y + +HID G VR+W
Sbjct: 172 FYPGTGHIHIDTGPVRTW 189
>gi|39997900|ref|NP_953851.1| hypothetical protein GSU2807 [Geobacter sulfurreducens PCA]
gi|39984845|gb|AAR36201.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length = 229
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 44 SSMSSDLLDQE-EVRTLKIYVVSTGSKAIVTFKR-GSQYNQEGLSQLNRLLYDWHSKQSI 101
S+++++ L++ V L + + TG VT++ + + + L+ +N LL + Q
Sbjct: 70 SALATEFLEESYPVGRLSLRNIHTGEHLSVTYRTPDGEVDLDALNSINWLLRCHFTNQHT 129
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+MD + ++L + + I+SGYR+ E N++LS N +A++S H+ GKA+D
Sbjct: 130 EMDLAVIEYLNMVDKVLGGGREFRIISGYRSPEYNRILSEHNGAVAKQSLHMEGKAIDIA 189
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+PGVSL L +A + GGVGYY S F+H+D GR R+W
Sbjct: 190 VPGVSLAVLRDLAAGFRCGGVGYYPHSGFVHLDSGRFRTW 229
>gi|72384653|gb|AAZ67618.1| hypothetical protein [Haemophilus parasuis 29755]
Length = 154
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 5/146 (3%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L++ +STG + + + + L++LN ++ D H + +DP+LF L +IQ
Sbjct: 7 ALRLKRLSTGETLSANYHT-NGFAAKDLNKLNHIMRDVHINRIKRIDPKLFVKLTQIQAR 65
Query: 118 FSV-PEYIYILSGYRTQETNKMLSRRNRKIA-RKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+SGYR+ +TN L RR+R +A S H+LGKA+DF I GV L + A
Sbjct: 66 LGLRKSEILIVSGYRSAQTNARLRRRSRGVASNNSYHILGKAIDFRIEGVPLARIKAAAE 125
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+H+D G VR+W
Sbjct: 126 SLNNGGVGYYPHSNFVHVDTGPVRTW 151
>gi|255262700|ref|ZP_05342042.1| Tat [Thalassiobium sp. R2A62]
gi|255105035|gb|EET47709.1| Tat [Thalassiobium sp. R2A62]
Length = 190
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +K+Y TG + + + Y + + ++N + DW + ++I MD + D +
Sbjct: 42 DIRRIKMYSGRTGERIDMIYWVDGDYIADAVKEVNFFMRDWRNSKTIQMDTRTIDVMAAS 101
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
E +LSGYR+ ETN ML RR+ +A+ S H+ G+A D + S+ + + A
Sbjct: 102 HNLMDTSEPYMLLSGYRSPETNAMLRRRSSGVAKNSLHMRGQAADIRLSSRSVSQMARAA 161
Query: 175 IRLKRGGVGYYS--KFLHIDVGRVRSW 199
R GGVG YS F+H+D G VRSW
Sbjct: 162 QRCSGGGVGRYSGANFVHMDCGPVRSW 188
>gi|260914200|ref|ZP_05920673.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631833|gb|EEX50011.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 186
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L+ ++TG F ++ L +L+ L+ D + MDP LF L+ IQ
Sbjct: 38 RILRFRNINTGDVFSSEFSLSKGFSSVALKRLDYLMRDKRNNHMHRMDPNLFSKLYRIQN 97
Query: 117 YFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+ GYR+ +N + RR+R +A S H G+A+DF I G SL + ++A
Sbjct: 98 NLGLRNTEIQIICGYRSPASNAAMRRRSRGVASNSYHTRGQAIDFRIDGTSLARVRQVAE 157
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
+L GGVGYY S F+H+D G VR+W
Sbjct: 158 KLSNGGVGYYPRSNFIHVDTGPVRTW 183
>gi|288959478|ref|YP_003449819.1| hypothetical protein AZL_026370 [Azospirillum sp. B510]
gi|288911786|dbj|BAI73275.1| hypothetical protein AZL_026370 [Azospirillum sp. B510]
Length = 289
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 57 RTLKIYVVSTGSKAIVTF-KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
R++ + ++G A VT+ + G Y+ + ++ L D S ++I +DP L D L E++
Sbjct: 46 RSVVLQHPASGETASVTYWRPGDGYDPAAMREIAALFRDRRSDETIPIDPALIDMLVELR 105
Query: 116 QYFSVPE--YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
Q P I I SGYR+ TN L+R N +A S H+ G+A DF I G+ L +
Sbjct: 106 QRVGAPPDSPIRITSGYRSSATNASLARTNPNVAENSYHLRGQAADFSIAGIPPSRLAEE 165
Query: 174 AIRLKRGGVGYYS--KFLHIDVGRVRSWT 200
A ++RGG Y+ +H+D G R+WT
Sbjct: 166 AAAMQRGGYAMYAHTGHVHVDTGPFRTWT 194
>gi|73537775|ref|YP_298142.1| twin-arginine translocation pathway signal [Ralstonia eutropha
JMP134]
gi|72121112|gb|AAZ63298.1| Twin-arginine translocation pathway signal [Ralstonia eutropha
JMP134]
Length = 187
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 21 VASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
+ + + +LSP L L + R+L TG + + G Q
Sbjct: 16 TGGLAIGAGLAALSPQLA-----------LANVSGARSLSFDHTHTGEHLQLVYALGDQV 64
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
+ + LN L D +S Q +DPQLF L+E+++ ++SGYR+ TN L
Sbjct: 65 LPQAQTTLNHFLRDHYSGQVGVIDPQLFGLLFELRRTLGSESPFQVISGYRSPVTNARLR 124
Query: 141 -RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVR 197
+A+ S H+ GKA+D +PGV+L L A+ L GGVG+Y++ F+H+D GRVR
Sbjct: 125 LTGGGGVAKHSLHMDGKAIDIRLPGVALADLRDAAMSLGVGGVGFYAREDFVHVDTGRVR 184
Query: 198 SW 199
W
Sbjct: 185 HW 186
>gi|113461216|ref|YP_719285.1| hypothetical protein HS_1073 [Haemophilus somnus 129PT]
gi|112823259|gb|ABI25348.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 187
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY 123
++TG + F ++ L +++ L+ D + Q MDP+LF IQ +
Sbjct: 46 INTGERFRGEFFANKGFSSSDLKKIDHLMRDKRNNQIHKMDPKLFHKFVHIQNNLGLQNS 105
Query: 124 -IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV 182
I I+ GYR+ +N + R R +AR S H G+A+DF I GVSL L + A LK GGV
Sbjct: 106 EIQIICGYRSPASNSAMLRSGRGVARNSYHTRGQAIDFRIEGVSLAKLRQTAENLKNGGV 165
Query: 183 GYY--SKFLHIDVGRVRSW 199
GYY S F+H+D G VR+W
Sbjct: 166 GYYPRSNFIHVDTGPVRTW 184
>gi|170717816|ref|YP_001784878.1| hypothetical protein HSM_1558 [Haemophilus somnus 2336]
gi|168825945|gb|ACA31316.1| protein of unknown function DUF882 [Haemophilus somnus 2336]
Length = 187
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY 123
++TG + F ++ L +++ L+ D + Q MDP+LF IQ +
Sbjct: 46 INTGERFRGEFFANKGFSSSDLKKIDHLMRDKRNNQIHKMDPKLFHKFVHIQNNLGLQNS 105
Query: 124 -IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV 182
I I+ GYR+ +N + R R +AR S H G+A+DF I GVSL L + A LK GGV
Sbjct: 106 EIQIICGYRSPASNSAMLRSGRGVARNSYHTRGQAIDFRIEGVSLAKLRQTAENLKNGGV 165
Query: 183 GYY--SKFLHIDVGRVRSW 199
GYY S F+H+D G VR+W
Sbjct: 166 GYYPRSNFIHVDTGPVRTW 184
>gi|163803522|ref|ZP_02197392.1| hypothetical protein 1103602000424_AND4_00418 [Vibrio sp. AND4]
gi|159172698|gb|EDP57549.1| hypothetical protein AND4_00418 [Vibrio sp. AND4]
Length = 190
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + GS Y + L +L+ D + MD +LFD + +
Sbjct: 48 DEPRVLAMNNLNTGELLESCYFDGSNYVDKELKRLDNFCRDHRRNEVHPMDRRLFDQISQ 107
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L +
Sbjct: 108 IQKLIGTENEVIVISGYRSPATNSSLRNSSSGVAKKSMHMEGKAIDFRLDGVKLSKVRDA 167
Query: 174 AIRLKRGGVGYY--SKFLHIDVG 194
A+ LK GGVGYY S F+HID G
Sbjct: 168 ALSLKAGGVGYYPRSNFVHIDTG 190
>gi|332288327|ref|YP_004419179.1| twin-arginine translocation protein [Gallibacterium anatis UMN179]
gi|330431223|gb|AEC16282.1| twin-arginine translocation protein [Gallibacterium anatis UMN179]
Length = 186
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY 123
++TG K F + L +LN L+ D S +MDP+LF ++IQ +
Sbjct: 45 INTGEKLSSPFSPNKGLAKSELQKLNYLMRDRRSNLVHNMDPKLFMKFYQIQSRLGLRSC 104
Query: 124 -IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV 182
I ++ GYR TN + RR++ +A S H+ G+A+DF I V+L + ++A LK GGV
Sbjct: 105 EISVICGYRAPATNAAMHRRSKGVASNSYHMRGQAIDFRIDNVALNRVREVAQSLKNGGV 164
Query: 183 GYY--SKFLHIDVGRVRSW 199
GYY S F+H+D G VR+W
Sbjct: 165 GYYPRSNFVHVDTGPVRTW 183
>gi|56696801|ref|YP_167163.1| Tat pathway signal sequence domain-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678538|gb|AAV95204.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Ruegeria pomeroyi DSS-3]
Length = 201
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + Y ++ + ++N + DW Q MD + D +
Sbjct: 53 DIRRIRMYSGRTGERIDMVYWIDGDYIKDAVKEINYFMRDWRVDQVKSMDLRTVDIMAAA 112
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +AR S H+ G+A D + S+ + A
Sbjct: 113 HNLMDVNEPYMLLSGYRSPQTNAMLRSRSRGVARNSLHMQGQAADLRLASRSVSQMANAA 172
Query: 175 IRLKRGGVG--YYSKFLHIDVGRVRSW 199
I + GGVG Y S F+H+D G VRSW
Sbjct: 173 IACRAGGVGKYYRSNFVHMDCGEVRSW 199
>gi|148827092|ref|YP_001291845.1| hypothetical protein CGSHiGG_02055 [Haemophilus influenzae PittGG]
gi|148718334|gb|ABQ99461.1| hypothetical protein CGSHiGG_02055 [Haemophilus influenzae PittGG]
gi|301170423|emb|CBW30029.1| conserved protein [Haemophilus influenzae 10810]
Length = 186
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFQ 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ IQ + I ++ GYR+ TN M R++R +A+ S H+ GKA+DF I V L
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIADVPLI 150
Query: 169 SLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A L+ GGVGYY S F+H+D G VR+W
Sbjct: 151 KVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|254511188|ref|ZP_05123255.1| Tat pathway signal sequence domain protein [Rhodobacteraceae
bacterium KLH11]
gi|221534899|gb|EEE37887.1| Tat pathway signal sequence domain protein [Rhodobacteraceae
bacterium KLH11]
Length = 175
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + +Y ++ + ++N + DW + Q MD + D +
Sbjct: 27 DIRRIRMYSGRTGERVDMVYWVDGKYIKDAVKEVNHFMRDWRNDQVKSMDLRTIDIMAAA 86
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + + A
Sbjct: 87 HNMLDVSEPYMLLSGYRSPKTNAMLRSRSRGVAKNSLHMKGQAADLRLSSRSVSQMARAA 146
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + GGVG Y S F+H+D G +R+W
Sbjct: 147 MSCRAGGVGQYYRSNFVHMDCGDIRTW 173
>gi|298506834|gb|ADI85557.1| protein of unknown function DUF882 [Geobacter sulfurreducens KN400]
Length = 186
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 44 SSMSSDLLDQE-EVRTLKIYVVSTGSKAIVTFKR-GSQYNQEGLSQLNRLLYDWHSKQSI 101
S+++++ L++ V L + + TG VT++ + + + L+ +N LL + Q
Sbjct: 27 SALATEFLEESYPVGRLSLRNIHTGEHLSVTYRTPDGEVDLDVLNSINWLLRCHFTNQHT 86
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+MD + ++L + + I+SGYR+ E N++LS N +A++S H+ GKA+D
Sbjct: 87 EMDLAVIEYLNMVDKELGGGREFRIISGYRSPEYNRILSEHNGAVAKQSLHMEGKAIDIA 146
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+PGVSL L +A + GGVGYY S F+H+D GR R+W
Sbjct: 147 VPGVSLAVLRDLAAGFRCGGVGYYPHSGFVHLDSGRFRTW 186
>gi|83942463|ref|ZP_00954924.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. EE-36]
gi|83846556|gb|EAP84432.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. EE-36]
Length = 181
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +K+Y TG + + + Y ++ +S+LN + DW + MD + D +
Sbjct: 33 DIRRIKMYSGRTGERIDMIYWIEGNYIKDAVSELNYFMRDWRTDGVKSMDLRTVDIMAAS 92
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + + A
Sbjct: 93 HNLLDVSEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHMRGQAADLRLASRSVNQMARAA 152
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
I GGVG Y S F+H+D G+VR+W
Sbjct: 153 IACNGGGVGRYSGSNFVHMDCGQVRNW 179
>gi|154252027|ref|YP_001412851.1| hypothetical protein Plav_1575 [Parvibaculum lavamentivorans DS-1]
gi|154155977|gb|ABS63194.1| protein of unknown function DUF882 [Parvibaculum lavamentivorans
DS-1]
Length = 186
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
RTL++ +++G K + + Y E L ++ + D +S DP+L D LWEI Q
Sbjct: 16 RTLRMQSLNSGEKLDLVYWADGDYLPEALKRVEWFMRDLRENKSAPTDPRLLDLLWEIDQ 75
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
IY +SGYRT++TN L R + S H+ G A+D + +Y++A +
Sbjct: 76 NTRSKNPIYTMSGYRTEKTNAWLDARGNGVDPGSFHMRGMAMDITQDFLDPEEVYRVARK 135
Query: 177 LKRGGVGYY---SKFLHIDVGRVRSW 199
L RGG G+Y + ++H+DVG V +W
Sbjct: 136 LGRGGAGFYPTKTPYVHVDVGPVDAW 161
>gi|260575118|ref|ZP_05843119.1| protein of unknown function DUF882 [Rhodobacter sp. SW2]
gi|259022740|gb|EEW26035.1| protein of unknown function DUF882 [Rhodobacter sp. SW2]
Length = 188
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
L ++R +++Y TG + +Y E L ++N + DW + + I MDP+ D
Sbjct: 35 LRGAGDIRMIRMYSGRTGESMDTIYWIEGEYIPEVLKEINHFMRDWRTDEKIKMDPRTID 94
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
+ + + E +LSGYR+ TN ML R+R +A+ S H++G+A D + S+
Sbjct: 95 IMAASHRLMDINEPYMLLSGYRSPATNAMLRSRSRGVAKHSLHMVGQAGDLRLKSRSVGQ 154
Query: 170 LYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + A GGVG Y S F+H+D G VR W
Sbjct: 155 MARAAEACASGGVGRYSHSNFVHMDCGPVRHW 186
>gi|163736472|ref|ZP_02143891.1| Twin-arginine translocation pathway signal [Phaeobacter
gallaeciensis BS107]
gi|161390342|gb|EDQ14692.1| Twin-arginine translocation pathway signal [Phaeobacter
gallaeciensis BS107]
Length = 189
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 21 VASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
A+ V +P +S + ++ ++R ++++ TG + + + +Y
Sbjct: 19 AATTLVAAPTFSNAAGFLR------------GAGDIRRIRMFSGRTGERIDMVYWIDGKY 66
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
++ + ++N + DW + Q D+D + D + V E +LSGYR+ +TN ML
Sbjct: 67 IKDAVKEVNHFMRDWRNDQVKDIDLRTIDIMAASHNLLDVNEPYMMLSGYRSPKTNAMLR 126
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRS 198
R+R +A+ S H+ G+A D + S+ + K A + GGVG Y S F+H+D G VRS
Sbjct: 127 SRSRGVAKNSLHMRGQAADLRLSSRSVSQMAKAAQACRAGGVGKYNRSNFVHMDCGVVRS 186
Query: 199 WT 200
W
Sbjct: 187 WN 188
>gi|15602136|ref|NP_245208.1| hypothetical protein PM0271 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720502|gb|AAK02355.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 186
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L+ ++TG K F ++ L +L+ L+ D + MDP+LF + +Q
Sbjct: 38 RILRFRNINTGEKFSAEFLPSKGFSSVALKKLDYLMRDKRNNHMHRMDPKLFLKFYRLQA 97
Query: 117 YFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+ GYR+ +N + RR+R +A S H G+A+DF I GV L L + A
Sbjct: 98 SLGLRNTEIQIICGYRSPVSNAAMHRRSRGVASNSYHTRGQAIDFRIDGVPLAKLRQAAE 157
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
+L GGVGYY S F+H+D G VR+W
Sbjct: 158 KLNNGGVGYYPRSNFIHVDTGPVRTW 183
>gi|152978758|ref|YP_001344387.1| hypothetical protein Asuc_1086 [Actinobacillus succinogenes 130Z]
gi|150840481|gb|ABR74452.1| protein of unknown function DUF882 [Actinobacillus succinogenes
130Z]
Length = 186
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R ++++ ++TG F GS + + + + D + MDP LF L+ IQ
Sbjct: 38 RIMRLHNINTGEFFNTEFSEGSFISASVQKKFDWFMRDRRNNLVHRMDPNLFAKLYRIQS 97
Query: 117 YFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+ GYR+ +N + RR+R +A S H+ GKA+DF I G++L ++ A
Sbjct: 98 NLGLRNTEIQIICGYRSPASNAAMRRRSRGVASNSYHIRGKAIDFRIDGIALNRVHHAAK 157
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
R++ GGVG+Y S F+H+D G VR+W
Sbjct: 158 RMQSGGVGFYPSSNFVHVDTGPVRTW 183
>gi|163743283|ref|ZP_02150664.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Phaeobacter gallaeciensis 2.10]
gi|161383471|gb|EDQ07859.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Phaeobacter gallaeciensis 2.10]
Length = 167
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R ++++ TG + + + +Y ++ + ++N + DW + Q D+D + D +
Sbjct: 19 DIRRIRMFSGRTGERIDMVYWIDGKYIKDAVKEVNHFMRDWRNDQVKDIDLRTIDIMAAS 78
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + K A
Sbjct: 79 HNLLDVNEPYMMLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQAADLRLSSRSVSQMAKAA 138
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+ GGVG Y S F+H+D G VRSW
Sbjct: 139 QACRAGGVGKYNRSNFVHMDCGVVRSWN 166
>gi|126736347|ref|ZP_01752089.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. CCS2]
gi|126714168|gb|EBA11037.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. CCS2]
Length = 189
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S+ + L ++R + ++ TG + + +Y E + ++N + DW + +++ M
Sbjct: 30 SNAAGFLRGAGDIRRIALHSGRTGERLETIYWIEGEYIAEAVREINMHMRDWRTGEAVQM 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + E +LSGYR+ TN+MLS R +AR S H+ G+A D +
Sbjct: 90 DLRTIDIMSAALNLMDTTEPYLLLSGYRSPRTNQMLSSNTRGVARNSLHMRGQAADLRLT 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G S + A+ + GGVG Y S F+H+D G VRSW
Sbjct: 150 GRSTAQMANAALACRAGGVGRYNGSNFVHMDCGPVRSW 187
>gi|30250491|ref|NP_842561.1| hypothetical protein NE2572 [Nitrosomonas europaea ATCC 19718]
gi|30139332|emb|CAD86484.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 193
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY 123
+ TG + + +Y E L + ++L D S +DP+L D + + +
Sbjct: 56 LHTGERVRTAYWERGKYIPEALRMIEKVLRDHRSGDIHRIDPRLLDLMQHLHHKTGNSKE 115
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
++SGYR+ TN LS ++ +A+ S H+ GKA+D +PGV L L + A+ + GGVG
Sbjct: 116 FQVVSGYRSPATNAALSVQSHGVAKNSLHMQGKAIDIRLPGVPLHVLRRAAMSMHAGGVG 175
Query: 184 YYSK--FLHIDVGRVRSW 199
YY K F+HID G VR W
Sbjct: 176 YYPKSNFIHIDTGNVRYW 193
>gi|296532929|ref|ZP_06895589.1| tat pathway signal sequence domain protein [Roseomonas cervicalis
ATCC 49957]
gi|296266739|gb|EFH12704.1| tat pathway signal sequence domain protein [Roseomonas cervicalis
ATCC 49957]
Length = 196
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
VR+LK+ T + R +Y++E L +L+ + D + + MDP+LFD L +
Sbjct: 51 VRSLKVQRAYTEDSFEGVYFRDGRYDREALHKLDWVFRDLSAAEVTPMDPRLFDVLHSVA 110
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ E I SGYRT E N +RR+ +++ S H+ G A DF +PG + ++A
Sbjct: 111 ERLEASEAFVISSGYRTPEHNANNARRSTRVSTVSLHMSGMAADFRLPGRDAFGVARMAA 170
Query: 176 RLKRGGVGYYSK--FLHIDVGRVRSW 199
+++ GGVG Y + F+H+D G R W
Sbjct: 171 QMQVGGVGLYRREGFVHLDCGPPRRW 196
>gi|89054635|ref|YP_510086.1| twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
gi|88864184|gb|ABD55061.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
Length = 185
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R L++Y G + + Y L ++N + DW + ID++ D +
Sbjct: 37 DIRKLQMYNGRAGESLNMIYWIEGDYIAPALDEVNYFMRDWRTDGVIDINIGTIDIMAAA 96
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
E +LSGYR+ ETN ML RR+ +AR S+H++G+A D + S+ ++ A
Sbjct: 97 HNLLETSEPYTLLSGYRSPETNAMLRRRSSGVARNSRHMVGEAADLQMQSRSVTQVFNAA 156
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
GGVG YS+ F+H+D G VRSW
Sbjct: 157 RSCNAGGVGRYSRSNFVHMDCGPVRSW 183
>gi|148262113|ref|YP_001228819.1| hypothetical protein Gura_0028 [Geobacter uraniireducens Rf4]
gi|146395613|gb|ABQ24246.1| protein of unknown function DUF882 [Geobacter uraniireducens Rf4]
Length = 186
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGS-QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y + +T++ + Y+ ++ LN +L +++Q DMD ++ ++L + +
Sbjct: 43 LSLYNTHNSERLTITYRNAAGDYDIGAINALNWILRCHYTQQVADMDVRVIEYLNLVDKR 102
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+I+SGYR+ N +L + R +A+ S H+ GKA+D IPG+ L + A+ L
Sbjct: 103 LGGNNEIHIISGYRSPVYNSLLRQEGRHVAKHSLHLKGKAIDIAIPGIGLDRVRHTALNL 162
Query: 178 KRGGVGYYSK--FLHIDVGRVRSW 199
+ GGVGYY K F+H+D G R+W
Sbjct: 163 RYGGVGYYPKTGFVHVDSGNFRAW 186
>gi|288957781|ref|YP_003448122.1| hypothetical protein AZL_009400 [Azospirillum sp. B510]
gi|288910089|dbj|BAI71578.1| hypothetical protein AZL_009400 [Azospirillum sp. B510]
Length = 236
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + + TG K + +Y ++ + +N LL D + +DP+L D + + +
Sbjct: 91 RVLSLVNLHTGEKINAEYWSKGKYVRDAMRAVNHLLRDHRNNSVHQIDPKLLDLVHALSR 150
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRK-IARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
I I+SGYR+ ETN +L + +A+ S H+ G A+D +P +S R L + A+
Sbjct: 151 KIGRKGPIEIVSGYRSPETNALLREADHSGVAQNSYHMRGMAIDLRMPNLSTRQLQRAAL 210
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S F+H+DVG +R W
Sbjct: 211 SLRGGGVGYYPDSNFVHVDVGPLRHW 236
>gi|254453963|ref|ZP_05067400.1| twin-arginine translocation pathway signal [Octadecabacter
antarcticus 238]
gi|198268369|gb|EDY92639.1| twin-arginine translocation pathway signal [Octadecabacter
antarcticus 238]
Length = 167
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R LK+Y TG + Y E + ++NR DW + Q+ +D + D +
Sbjct: 19 DIRRLKMYSGRTGESIDTIYWIEGDYIPEAVDEVNRFFRDWRNGQTHQIDTRTIDIVAAT 78
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
Q + ++SG+R+ +TN ML + +AR S H+ G+A D + G S+ + + A
Sbjct: 79 QNLLDSSQPYTLISGFRSPQTNAMLRSNSSGVARNSLHLQGQAADLRMQGRSVNQMARAA 138
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
GGVG Y S F+H+D G VRSW
Sbjct: 139 ASCSAGGVGRYSGSNFVHMDCGAVRSW 165
>gi|110679846|ref|YP_682853.1| hypothetical protein RD1_2617 [Roseobacter denitrificans OCh 114]
gi|109455962|gb|ABG32167.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 189
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S+ + L ++R +++Y TG + + + +Y E + ++N + DW + M
Sbjct: 30 SNAAGFLRGSGDIRRIRMYSGRTGERIDMIYWIEGEYVPEAVKEVNHFMRDWRTDGVKSM 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + E +LSGYR+ +TN ML R+R +A+ S HV G+A D +
Sbjct: 90 DLRTIDIMSAAHNLMDADEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHVKGQAADLRLS 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
++ + + A K GGVG YS+ F+H+D G VR+W
Sbjct: 150 TRTVSQMARAAAACKGGGVGKYSRSNFVHMDCGVVRTW 187
>gi|253700196|ref|YP_003021385.1| hypothetical protein GM21_1572 [Geobacter sp. M21]
gi|251775046|gb|ACT17627.1| protein of unknown function DUF882 [Geobacter sp. M21]
Length = 189
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y ++ + VT++ +Y QE L LN L ++ + +MD ++ ++L +
Sbjct: 46 LSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLFRCHYTNEMTEMDLRVIEYLNRLDNT 105
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+I+SGYR+ N ML +++ +A+ S H+ G A+D IP + L + + A+ L
Sbjct: 106 LGGDNEIHIISGYRSPAYNAMLRSKSKGVAKNSLHMKGMAIDLAIPSLGLDQIRRSALTL 165
Query: 178 KRGGVGYYSK--FLHIDVGRVRSW 199
GGVGYY + F+HID G R+W
Sbjct: 166 AAGGVGYYPQPGFVHIDSGHFRTW 189
>gi|126462183|ref|YP_001043297.1| hypothetical protein Rsph17029_1415 [Rhodobacter sphaeroides ATCC
17029]
gi|221639178|ref|YP_002525440.1| hypothetical protein RSKD131_1079 [Rhodobacter sphaeroides KD131]
gi|126103847|gb|ABN76525.1| protein of unknown function DUF882 [Rhodobacter sphaeroides ATCC
17029]
gi|221159959|gb|ACM00939.1| Hypothetical Protein RSKD131_1079 [Rhodobacter sphaeroides KD131]
Length = 188
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+VR +++Y TG + +Y E L ++N + DW + I +D + D +
Sbjct: 40 DVRRIRMYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDVIRIDARTVDIMAAS 99
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ V E +LSGYR +TN ML R+ +AR S H+ G+A D + S+ + K A
Sbjct: 100 HRLMDVSEPYMLLSGYRCPKTNAMLRSRSSGVARNSLHLKGQAADLRLKSRSVGQMAKAA 159
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
GGVG YS+ F+H+D G VR W
Sbjct: 160 EACASGGVGRYSRSDFVHMDCGPVRHW 186
>gi|163793881|ref|ZP_02187855.1| hypothetical protein BAL199_12651 [alpha proteobacterium BAL199]
gi|159180992|gb|EDP65509.1| hypothetical protein BAL199_12651 [alpha proteobacterium BAL199]
Length = 150
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R ++ + TG V + +Y L+ L+ L D +DP LFDFL +
Sbjct: 4 RRIRAQHLHTGESVDVVYFENGRYAPRSLAVLDHFLRDHRDGSIHPIDPVLFDFLHIVNS 63
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + I+ GYR++++N +L + +A+ S H++G+A+D IPG S+ + ++A
Sbjct: 64 RLGGRQPVEIVCGYRSEKSNALLRSISTGVAKNSLHMIGQAIDIRIPGRSVAEIAQVAES 123
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
++RGGVG Y S F+H+D G VR+W
Sbjct: 124 VQRGGVGRYRRSGFVHLDTGNVRTW 148
>gi|77463327|ref|YP_352831.1| hypothetical protein RSP_2773 [Rhodobacter sphaeroides 2.4.1]
gi|77387745|gb|ABA78930.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 212
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+VR +++Y TG + +Y E L ++N + DW + I +D + D +
Sbjct: 64 DVRRIRMYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDVIRIDARTVDIMAAS 123
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ V E +LSGYR +TN ML R+ +AR S H+ G+A D + S+ + K A
Sbjct: 124 HRLMDVSEPYMLLSGYRCPKTNAMLRSRSSGVARNSLHLKGQAADLRLKSRSVGQMAKAA 183
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
GGVG YS+ F+H+D G VR W
Sbjct: 184 EACASGGVGRYSRSDFVHMDCGPVRHW 210
>gi|146277081|ref|YP_001167240.1| hypothetical protein Rsph17025_1034 [Rhodobacter sphaeroides ATCC
17025]
gi|145555322|gb|ABP69935.1| protein of unknown function DUF882 [Rhodobacter sphaeroides ATCC
17025]
Length = 188
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+VR +++Y TG + +Y E L ++N + DW + +DP+ D +
Sbjct: 40 DVRRIRMYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDITRIDPRAVDIMAAS 99
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ V E +LSGYR+ +TN ML ++ +AR S H+ G+A D + S+ + K A
Sbjct: 100 HRLMDVSEPYMLLSGYRSPKTNAMLRSQSSGVARNSLHLRGQAADLRLKSRSVGQMAKAA 159
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
GGVG YS+ F+H+D G VR W
Sbjct: 160 EACASGGVGRYSRSDFVHMDCGPVRHW 186
>gi|56551227|ref|YP_162066.1| hypothetical protein ZMO0331 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760891|ref|ZP_04758980.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753139|ref|YP_003226032.1| hypothetical protein Za10_0902 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542801|gb|AAV88955.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374510|gb|EER63971.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552502|gb|ACV75448.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 198
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 47 SSDLLDQEEVRT--LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
SD L V+ L V T + F Y+ EGL+++N L DW + ++D
Sbjct: 35 GSDFLHWGNVKEKRLAFRNVHTNERIDARFFGKHGYDDEGLAEINHALRDWRTGDITEVD 94
Query: 105 PQLFDFLWEIQQYF--SVPEYIYILSGYRTQETNKML-SRRNRK--IARKSQHVLGKAVD 159
L + L +I+ S + ++ GYR+ TN+ L RR R +A SQH+LGKA D
Sbjct: 95 TDLLNLLVKIRDRLDISANQPFDLICGYRSPITNRRLHERRGRHSGVAVHSQHLLGKATD 154
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+PGVSL L A ++GGVGYY + F+H+D G VRSW
Sbjct: 155 IAMPGVSLNHLRMAAEFDQQGGVGYYPEDGFIHVDTGPVRSW 196
>gi|254465749|ref|ZP_05079160.1| Tat pathway signal sequence domain protein [Rhodobacterales
bacterium Y4I]
gi|206686657|gb|EDZ47139.1| Tat pathway signal sequence domain protein [Rhodobacterales
bacterium Y4I]
Length = 189
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + QY ++ + ++N + DW + ++D + D +
Sbjct: 41 DIRRIRMYSGRTGERVDMVYWIDGQYIKDAVKEINHFMRDWRTDDVKEIDLRTIDIMAAS 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + + A
Sbjct: 101 HNLLDVNEPYMLLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQAADLRLASRSVSQMAQAA 160
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVG Y S F+H+D G VR+W
Sbjct: 161 EACRAGGVGKYQRSNFVHMDCGVVRTW 187
>gi|294677411|ref|YP_003578026.1| hypothetical protein RCAP_rcc01874 [Rhodobacter capsulatus SB 1003]
gi|294476231|gb|ADE85619.1| protein of unknown function DUF882 [Rhodobacter capsulatus SB 1003]
Length = 167
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
++ + S+ S L ++R + +Y TG + +Y E L ++ R + DW
Sbjct: 1 MVAAPKASNAFSFLRGAGDIRRIHMYSGRTGESLDTIYWIEGEYIPEALKEITRFMRDWR 60
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ +DP+ D + E +LSGYR+ TN ML R+ +AR S H+ G
Sbjct: 61 TNDVKTIDPRTVDIAAASHRLLDTSEPYMLLSGYRSPATNAMLRSRSGGVARNSLHMRGM 120
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
A D + S+ +Y A+ GGVG Y++ F+H+D G +RSW
Sbjct: 121 AADLRLKSRSVGQIYSAALSCHAGGVGKYARSDFVHMDCGNIRSW 165
>gi|254476884|ref|ZP_05090270.1| Tat pathway signal sequence domain protein [Ruegeria sp. R11]
gi|214031127|gb|EEB71962.1| Tat pathway signal sequence domain protein [Ruegeria sp. R11]
Length = 210
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R ++++ TG + + + +Y ++ + ++N + DW S ++D + D +
Sbjct: 62 DIRRIRMFSGRTGERIDMVYWIDGKYIKDAVKEINYFMRDWRSDDVKEIDLRTIDIMAAS 121
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + A
Sbjct: 122 HNLLDVNEPYMMLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQAADLRLSSRSVTQMANAA 181
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSWT 200
I + GGVG Y S F+H+D G VRSW
Sbjct: 182 IACRAGGVGKYRRSNFVHMDCGVVRSWN 209
>gi|262197372|ref|YP_003268581.1| hypothetical protein Hoch_4190 [Haliangium ochraceum DSM 14365]
gi|262080719|gb|ACY16688.1| protein of unknown function DUF882 [Haliangium ochraceum DSM 14365]
Length = 256
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ + +DMDP+LF L ++F I+I+SG+R + N ML ++ R++ARKSQH LG
Sbjct: 150 TGEPMDMDPRLFAALVSAARHFGA-RDIHIVSGFRAPKYNLMLRKKGREVARKSQHTLGS 208
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+DF + GV +R L+ + + GGVG Y S F+H+D G +R W
Sbjct: 209 AIDFRLIGVPVRKLHAWVTQQRLGGVGLYVGSGFVHMDTGPIRFW 253
>gi|197119040|ref|YP_002139467.1| hypothetical protein Gbem_2663 [Geobacter bemidjiensis Bem]
gi|197088400|gb|ACH39671.1| protein of unknown function DUF882 [Geobacter bemidjiensis Bem]
Length = 190
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y ++ + VT++ +Y QE L LN L ++ + MD ++ ++L +
Sbjct: 46 LSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLFRCHYTNEMTKMDLRVIEYLNRLDNT 105
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+I+SGYR+ N ML +++ +A+ S H+ G+A+D IP L + + A+ L
Sbjct: 106 LGGNNEIHIISGYRSPAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRRSALTL 165
Query: 178 KRGGVGYYSK--FLHIDVGRVRSW 199
GGVGYY + F+HID G R+W
Sbjct: 166 AAGGVGYYPQPGFVHIDSGNFRTW 189
>gi|84684825|ref|ZP_01012725.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667160|gb|EAQ13630.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodobacterales bacterium HTCC2654]
Length = 148
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
+R + +Y TG + +Y +E L+++N + D + I +D + D
Sbjct: 1 MRRIAMYAGRTGESINTIYWIEGEYIKEALAEINYFMRDARVDKQIAIDTRTLDITAAAH 60
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
E +LSGYR+ ETN ML R+R +A+ S H+ G+A D + S+ ++K A
Sbjct: 61 ALLDSTEPYMLLSGYRSPETNAMLRSRSRGVAKNSLHLKGQAADLRLNSRSVNQIFKAAQ 120
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVG Y S F+H+D G+VRSW
Sbjct: 121 ACRAGGVGKYSGSNFVHMDCGQVRSW 146
>gi|224369239|ref|YP_002603403.1| hypothetical protein HRM2_21410 [Desulfobacterium autotrophicum
HRM2]
gi|223691956|gb|ACN15239.1| hypothetical protein HRM2_21410 [Desulfobacterium autotrophicum
HRM2]
Length = 188
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
SS L E +TL+ Y TG + V + Y +L L D+ + + +D +
Sbjct: 35 SSVLATPSEPKTLRFYHTHTGERISVDYS-PETYKGSMRRELEYFLRDFRTGEVHRIDRR 93
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L D L IQ I+SGYR+ +TN L +++ +A+KS H+ G+A+D + +
Sbjct: 94 LLDVLTTIQHNCGSHSCYEIISGYRSAKTNAFLRKKSSGVAKKSYHMQGRAMDIRLADLD 153
Query: 167 LRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+ L +AI+ RGGVG+Y K F+HID GR R W
Sbjct: 154 TKVLRDLAIKFNRGGVGFYPKSDFVHIDTGRKRRW 188
>gi|330984444|gb|EGH82547.1| hypothetical protein PLA107_05396 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 179
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 21/188 (11%)
Query: 19 VSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF-KRG 77
++ A+ +T P L+ S LLDQ+ R L +Y T + I + K+G
Sbjct: 4 LATAATIITEP-------LMAQPGASDWRKRLLDQD--RVLNLYRPQTKERRIFCYWKKG 54
Query: 78 SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV----PEYIYILSGYRTQ 133
+ + G LL D K+ +D LFD L+ IQQ+ ++ PE I +LSGYRT
Sbjct: 55 QGFQKTGYLDGIWLLRDATYKKQSFIDANLFDVLFIIQQWLTIEGRNPE-IQVLSGYRTP 113
Query: 134 ETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHI 191
E N L A++S H+ GKA D ++PGV+ + L +++ + GGVG Y F+H+
Sbjct: 114 EHNFRLE----GAAKQSLHMQGKACDIHVPGVTTKLLAAMSMMIAAGGVGIYQDRGFIHV 169
Query: 192 DVGRVRSW 199
D G++R+W
Sbjct: 170 DTGKIRTW 177
>gi|159044169|ref|YP_001532963.1| hypothetical protein Dshi_1620 [Dinoroseobacter shibae DFL 12]
gi|157911929|gb|ABV93362.1| hypothetical protein Dshi_1620 [Dinoroseobacter shibae DFL 12]
Length = 189
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R LK++ TG + + +Y +E L ++N + DW +D + D +
Sbjct: 41 DIRRLKMHSGRTGERIDTIYWVEGKYVKEALKEINYFMRDWRRDAVAPIDRRTIDIMAAA 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+R + A
Sbjct: 101 HNMLDVDEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMQGQAADLRLGSRSVRQIAAAA 160
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
K GGVG Y S+F+H+D G VR W
Sbjct: 161 AACKAGGVGKYSGSQFVHMDCGPVRVW 187
>gi|83953682|ref|ZP_00962403.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. NAS-14.1]
gi|83841627|gb|EAP80796.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. NAS-14.1]
Length = 143
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + Y ++ +S+LN + DW + MD + D + V
Sbjct: 1 MYSGRTGERIDMIYWIEGNYIKDAVSELNYFMRDWRTDGVKSMDLRTVDIMAASHNLLDV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + + AI G
Sbjct: 61 SEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHMRGQAADLRLASRSVNQMARAAIACNGG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G+VR+W
Sbjct: 121 GVGRYSGSNFVHMDCGQVRNW 141
>gi|254487415|ref|ZP_05100620.1| Tat pathway signal sequence domain protein [Roseobacter sp. GAI101]
gi|214044284|gb|EEB84922.1| Tat pathway signal sequence domain protein [Roseobacter sp. GAI101]
Length = 181
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +K++ TG + + + Y + + ++N + DW + +D + D +
Sbjct: 33 DIRRIKMFSGRTGERIDMIYWIEGDYVADAVKEVNHFMRDWRTDGIKSIDLRTIDIMAAA 92
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML ++R +A+ S H+ G+A D + S+ + K A
Sbjct: 93 HNLMDVNEPYMLLSGYRSPKTNAMLRSKSRGVAKNSLHMRGQAADVRLASRSVNQMAKAA 152
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + GGVG Y S F+H+D G+VRSW
Sbjct: 153 VACRGGGVGRYSGSNFVHMDCGQVRSW 179
>gi|126737822|ref|ZP_01753552.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. SK209-2-6]
gi|126721215|gb|EBA17919.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. SK209-2-6]
Length = 189
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + Y ++ + ++N + DW + Q +D + D +
Sbjct: 41 DIRRIRMYSGRTGERLDMIYWIDGDYIKDAVREVNYFMRDWRTDQIKSIDLRTIDIMAAS 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + + A
Sbjct: 101 HNLLDVSEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLASRSVSQMARAA 160
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
+ GGVG YS+ F+H+D G VRSW
Sbjct: 161 QACRAGGVGKYSRSNFVHMDCGIVRSW 187
>gi|288957328|ref|YP_003447669.1| hypothetical protein AZL_004870 [Azospirillum sp. B510]
gi|288909636|dbj|BAI71125.1| hypothetical protein AZL_004870 [Azospirillum sp. B510]
Length = 219
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG ++ GS + ++ L + L D + + +D DFL +I +
Sbjct: 44 TGESFDGPYRDGSGPLPDAMTDLAKFLRDHRANKEGPVDVGTLDFLADILDAVGQSKAT- 102
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
ILS +RT ETN ML+ R+ +A SQH++G+A+D +P L ++ A+ LKRGGVG+Y
Sbjct: 103 ILSAFRTPETNAMLAARSLGVAEHSQHLVGRALDITLP-ARLPDAHRSALDLKRGGVGWY 161
Query: 186 --SKFLHIDVGRVRSW 199
S FLHID G +RSW
Sbjct: 162 PRSHFLHIDTGPLRSW 177
>gi|99081058|ref|YP_613212.1| twin-arginine translocation pathway signal [Ruegeria sp. TM1040]
gi|99037338|gb|ABF63950.1| Twin-arginine translocation pathway signal [Ruegeria sp. TM1040]
Length = 188
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + +Y ++ + ++N + DW + Q +D + D +
Sbjct: 40 DIRRIRMYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDWRNDQVKAIDLRTIDIMAAS 99
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + ++ + + A
Sbjct: 100 SNLLEVNEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLSTRTVSQMAQAA 159
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
K GGVG Y S F+H+D G VRSW
Sbjct: 160 QACKAGGVGRYYGSNFVHMDCGVVRSW 186
>gi|86138267|ref|ZP_01056841.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. MED193]
gi|85824792|gb|EAQ44993.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. MED193]
Length = 181
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R ++++ TG + + + Y ++ + ++N + DW + Q +D + D +
Sbjct: 33 DIRRIRMFSGRTGERIDMIYWIDGDYIKDAVKEINYFMRDWRTDQVKSIDLRTIDIMAAS 92
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + A
Sbjct: 93 HNLLDVSEPYMMLSGYRSPQTNAMLRSRSRGVAKNSLHMRGQAADLRLSSRSVSQMANAA 152
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+ GGVG Y S F+H+D G VRSW+
Sbjct: 153 KACRAGGVGKYRGSNFVHMDCGVVRSWS 180
>gi|260428661|ref|ZP_05782640.1| Tat [Citreicella sp. SE45]
gi|260423153|gb|EEX16404.1| Tat [Citreicella sp. SE45]
Length = 189
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 16 GLYVSVASFFVTS-PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
GL + A+ VT+ P Y + ++ ++R +K+Y TG K + +
Sbjct: 13 GLLGAFAATLVTAAPTYGNAAGFLR------------GGGDIRRIKMYSGRTGEKIDMIY 60
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
+Y + L ++ + DW + +D + D + E ++SGYR+ +
Sbjct: 61 WIEGEYIPDALKEITYFMRDWRTNDVKHIDARTIDIMTAAHNLMDTTEPYMLISGYRSPK 120
Query: 135 TNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHID 192
TN ML R+ +A+ S+H+ G+A D ++ S+ + K A + GGVG Y S F+H+D
Sbjct: 121 TNAMLRSRSSGVAKNSRHLKGEAADLHMNSRSVNQIAKAAQACRAGGVGRYTSSSFVHMD 180
Query: 193 VGRVRSW 199
G VR+W
Sbjct: 181 CGPVRTW 187
>gi|255596953|ref|XP_002536657.1| conserved hypothetical protein [Ricinus communis]
gi|223518961|gb|EEF25727.1| conserved hypothetical protein [Ricinus communis]
Length = 224
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 72 VTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV---PEYIYILS 128
+T+ R Q EG RLL D + Q MDP +FD L + Y+ + + I S
Sbjct: 86 ITYWRDGQLVPEGYWAACRLLRDVRANQMTYMDPAVFDILRGLLGYYQAWGWDQPLIINS 145
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK- 187
G+RT TN L ++ A+ S H+ G+AVD ++ G+ + L ++ + +RGGVG+Y
Sbjct: 146 GFRTVATNNQLVNKHEGAAKNSMHLYGRAVDLHMAGIPVAHLMQLGLYFRRGGVGFYPPT 205
Query: 188 -----FLHIDVGRVRSW 199
F+H+D GR+R+W
Sbjct: 206 TDRIGFVHLDTGRLRTW 222
>gi|126726525|ref|ZP_01742366.1| hypothetical protein RB2150_02454 [Rhodobacterales bacterium
HTCC2150]
gi|126704388|gb|EBA03480.1| hypothetical protein RB2150_02454 [Rhodobacterales bacterium
HTCC2150]
Length = 206
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +K+ TG + + +Y +E L +++ + DW S I +D + D +
Sbjct: 58 DIRRIKMRSGRTGESIDMVYWVEGKYIREALDEVSYFMRDWRSDSVIGIDRRTIDIMAAS 117
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
E +LSGYR+ +TN ML ++R +A+ S H+ G+A D + S + K A
Sbjct: 118 HNLLDTTEPYMMLSGYRSPKTNAMLRSKSRGVAKNSLHMKGQAADLRLSNRSTGQIAKAA 177
Query: 175 IRLKRGGVGYYSK--FLHIDVGRVRSW 199
GGVG YS+ F+H+D G+VRSW
Sbjct: 178 KSCASGGVGRYSRSNFVHMDCGQVRSW 204
>gi|310815556|ref|YP_003963520.1| hypothetical protein EIO_1073 [Ketogulonicigenium vulgare Y25]
gi|308754291|gb|ADO42220.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 155
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + QY E + ++ + DW + + I +D + D L
Sbjct: 7 DIRRIRMYSGRTGEQLDTIYWIDGQYVPEAVREVTYFMRDWRNNEMIGIDTRTIDILTAT 66
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ V +LSG+R+ +TN ML + +AR S H+ G+AVD + G S+ + A
Sbjct: 67 HRLVDVNRPYMLLSGFRSPQTNAMLRATSSGVARDSLHMRGQAVDVRLEGRSVSQVASAA 126
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
R GGVG Y S F+H+D G VR W
Sbjct: 127 ERCSAGGVGRYSGSNFVHMDCGAVRQW 153
>gi|240142234|ref|YP_002966744.1| hypothetical protein MexAM1_META2p0556 [Methylobacterium extorquens
AM1]
gi|240012178|gb|ACS43403.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 207
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
L+++ +TG K + GS +N GL Q + +L D+ + D +L+ L+ +Q+ F
Sbjct: 60 LRLHNTNTGDKLAIDLFVGSDWNPTGLVQADYMLRDFRQNLVVQNDRRLYAALYVLQRAF 119
Query: 119 SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI--PGVSLRSLYKIAIR 176
Y+ + SGYRT TN+ML R+ AR+S H +AVD+ I P +L + ++A
Sbjct: 120 VGDGYVKVNSGYRTTTTNEMLRRQGLGAARESFHTKARAVDYLIPNPNATLSEIARVAKG 179
Query: 177 LKRGGVGYYSKFLHIDVGRV-RSW 199
G V Y+ F+H+D G RSW
Sbjct: 180 FHIGAVALYNNFIHMDTGDPDRSW 203
>gi|315633944|ref|ZP_07889233.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477194|gb|EFU67937.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 186
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L ++TG K F G ++ L L+ LL D + Q MDP LF +++QQ
Sbjct: 38 RLLSFRNINTGEKLSAEFALGRGFSNATLRLLDHLLRDKRTNQVHRMDPNLFTKFYKVQQ 97
Query: 117 YFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I+ GYR+ +N + RR+R +A S H+ G+A+DF I G+ L +
Sbjct: 98 NLGLRNTEIQIICGYRSAASNAAMHRRSRGVASNSYHIRGQAIDFRIDGIPLAKVRDAVD 157
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVG+Y S F+H+D G VR+W
Sbjct: 158 ALQNGGVGFYPRSNFVHMDTGPVRTW 183
>gi|84503419|ref|ZP_01001479.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola batsensis HTCC2597]
gi|84388206|gb|EAQ01158.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola batsensis HTCC2597]
Length = 143
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + Y ++ +++++ + DW + +D + D + V
Sbjct: 1 MYSARTGERIDMIYWVDGHYIKDAVTEVSHFMRDWRNDIVKPIDLRTIDIMAASHNLLEV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ ETN ML R+R +AR S H+ G+A D + S+ + + A + G
Sbjct: 61 NEPYMLLSGYRSPETNAMLRSRSRNVARNSLHLKGQAADLRLSSRSVNQMARAASACRAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VRSW
Sbjct: 121 GVGRYSGSNFVHMDCGPVRSW 141
>gi|332558205|ref|ZP_08412527.1| hypothetical protein RSWS8N_04100 [Rhodobacter sphaeroides WS8N]
gi|332275917|gb|EGJ21232.1| hypothetical protein RSWS8N_04100 [Rhodobacter sphaeroides WS8N]
Length = 143
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
+Y E L ++N + DW + I +D + D + + V E +LSGYR +TN M
Sbjct: 19 EYIPEALKEINHFMRDWRTNDVIRIDARTVDIMAASHRLMDVSEPYMLLSGYRCPKTNAM 78
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRV 196
L R+ +AR S H+ G+A D + S+ + K A GGVG YS+ F+H+D G V
Sbjct: 79 LRSRSSGVARNSLHLKGQAADLRLKSRSVGQMAKAAEACASGGVGRYSRSDFVHMDCGPV 138
Query: 197 RSW 199
R W
Sbjct: 139 RHW 141
>gi|259418632|ref|ZP_05742549.1| twin-arginine translocation pathway signal [Silicibacter sp.
TrichCH4B]
gi|259344854|gb|EEW56708.1| twin-arginine translocation pathway signal [Silicibacter sp.
TrichCH4B]
Length = 143
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + +Y ++ + ++N + DW + Q +D + D + V
Sbjct: 1 MYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDWRTDQVKTIDLRTIDIMTASLNLLEV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+KS H+ G+A D + S+ + + A K G
Sbjct: 61 NEPYLLLSGYRSPQTNAMLRSRSRGVAKKSLHMQGQAADLRLASRSVSQMAQAAQACKAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VR+W
Sbjct: 121 GVGRYYGSNFVHMDCGVVRTW 141
>gi|78222960|ref|YP_384707.1| twin-arginine translocation pathway signal [Geobacter
metallireducens GS-15]
gi|78194215|gb|ABB31982.1| Twin-arginine translocation pathway signal [Geobacter
metallireducens GS-15]
Length = 187
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGS-QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L ++ T + + F+ + Y+ + L+ LN +L ++ + +MD +FL + +
Sbjct: 44 LSLFNTHTRERIALAFRDAAGNYDLDSLNTLNWILRCHYTNEVTEMDVNTLEFLNLVDKK 103
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
F I+I+S YR+ N +L +A+ S H+ G+A+D IPG S+ S+ + A+ L
Sbjct: 104 FGGNNEIHIISAYRSPLYNNLLRENGHGVAQHSLHLAGRAIDISIPGKSIASIREAAVDL 163
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
GGVG+Y S F+HID G R+W
Sbjct: 164 HMGGVGFYPNSGFVHIDSGAFRTW 187
>gi|51244921|ref|YP_064805.1| hypothetical protein DP1069 [Desulfotalea psychrophila LSv54]
gi|50875958|emb|CAG35798.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 185
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
L D+ +K+ +D +L D L +I+Q ++SGYR+ TN +L ++ +A+KS
Sbjct: 76 LRDFRTKEVHSIDFRLMDILLKIRQKTGSTGIYQVISGYRSPNTNNLLRGKSTGVAKKSL 135
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H+ G+A+D + V + L +A+ L+ GGVGYY+K F+HID G VRSW
Sbjct: 136 HLQGRAIDIRLTDVPTKELRDVALSLRAGGVGYYAKSDFVHIDTGHVRSW 185
>gi|293392040|ref|ZP_06636374.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952574|gb|EFE02693.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 186
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+ Q MDPQLF + +QQ + I I+ GYR+ +N + RR+R +A S H+ G
Sbjct: 78 NNQVHKMDPQLFTKFYRVQQNLCLRNTEIQIICGYRSAASNAAMHRRSRGVASNSYHIRG 137
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A+DF I GV L L L GGVG+Y S F+H+D G VR+W
Sbjct: 138 QAIDFRIDGVPLAKLRDAVEALNDGGVGFYPRSNFIHMDTGPVRTW 183
>gi|261868417|ref|YP_003256339.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413749|gb|ACX83120.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 148
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+ Q MDPQLF + +QQ + I I+ GYR+ +N + RR+R +A S H+ G
Sbjct: 40 NNQVHKMDPQLFTKFYRVQQNLGLRNTEIQIICGYRSAASNAAMHRRSRGVASNSYHIRG 99
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A+DF I GV L L L GGVG+Y S F+H+D G VR+W
Sbjct: 100 QAIDFRIDGVPLAKLRDAVEALNDGGVGFYPRSNFIHMDTGPVRTW 145
>gi|163731884|ref|ZP_02139331.1| hypothetical protein RLO149_21309 [Roseobacter litoralis Och 149]
gi|161395338|gb|EDQ19660.1| hypothetical protein RLO149_21309 [Roseobacter litoralis Och 149]
Length = 143
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + Y +E + ++N + DW + MD + D +
Sbjct: 1 MYSGRTGERIDMIYWIEGDYVREAVKEVNHFMRDWRTDGVKSMDLRTIDIMSAAHNLMDA 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+ S HV G+A D + S+ + + A G
Sbjct: 61 NEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHVKGQAADLRLSTRSVSQMARAAAACNGG 120
Query: 181 GVGYYSK--FLHIDVGRVRSW 199
GVG YS+ F+H+D G VR+W
Sbjct: 121 GVGKYSRSNFVHMDCGVVRTW 141
>gi|149914645|ref|ZP_01903175.1| hypothetical protein RAZWK3B_13669 [Roseobacter sp. AzwK-3b]
gi|149811438|gb|EDM71273.1| hypothetical protein RAZWK3B_13669 [Roseobacter sp. AzwK-3b]
Length = 231
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY---IYILSGYRTQETNKMLSRRNR 144
L+ L DW + I +DP + L + + + + + I SGYRT+ETN L R+
Sbjct: 115 LDHFLRDWRRNRVIPIDPFVTGSLALVVREATRLGWSGTVQINSGYRTRETNADLRRKGI 174
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
AR S H+ G+A+DF +PGV R + +A +L GG+G Y+ F+HID GR RSW
Sbjct: 175 GAARNSLHLTGQAIDFVLPGVPPRRIGALARQLLPGGIGTYASFVHIDSGRRRSW 229
>gi|83593849|ref|YP_427601.1| twin-arginine translocation pathway signal [Rhodospirillum rubrum
ATCC 11170]
gi|83576763|gb|ABC23314.1| Twin-arginine translocation pathway signal [Rhodospirillum rubrum
ATCC 11170]
Length = 187
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R+L + + TG + + +Y + L +++ +L D+ + + +D L D L+E+
Sbjct: 42 RSLSLENLHTGERIKRVYWANGRYVPDSLREIDHVLRDFRTGDVLPIDRGLLDLLYELHA 101
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRR-NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
++SGYR+ TN +L +A++S H+ G A+D + ++ L + A+
Sbjct: 102 TMETRAPFRVISGYRSPRTNALLRETGGGGVAKQSLHMRGMAIDIALKDRTISQLRRGAL 161
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L+RGGVGYY S F+H+DVG+VRSW
Sbjct: 162 GLRRGGVGYYPESGFVHVDVGKVRSW 187
>gi|126729660|ref|ZP_01745473.1| hypothetical protein SSE37_04280 [Sagittula stellata E-37]
gi|126709779|gb|EBA08832.1| hypothetical protein SSE37_04280 [Sagittula stellata E-37]
Length = 143
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + QY + + ++N + DW + ++D + D +
Sbjct: 1 MYSGRTGERIDMIYWIEGQYLADAIKEINYFMRDWRTNDIKNIDARTIDICTAAHRLLDC 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E ++SGYR+ +TN ML R+ +A+ S+H+ G+A D + S+ + K A+ G
Sbjct: 61 SEPYMLISGYRSPKTNAMLRSRSSGVAKNSRHLRGEAADLRLSSRSVNQMAKAAMACHGG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VRSW
Sbjct: 121 GVGRYSGSNFVHMDCGPVRSW 141
>gi|149927482|ref|ZP_01915736.1| putative secreted protein [Limnobacter sp. MED105]
gi|149823755|gb|EDM82981.1| putative secreted protein [Limnobacter sp. MED105]
Length = 213
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ RTL++ +G + +T+ + N Q+ LL D + Q MD Q+ D LW
Sbjct: 58 QPRTLEMVRPQSGERLNITYWKDGHLNPIAYEQICGLLRDVQANQVFRMDTQIIDTLWAA 117
Query: 115 QQY-----FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
Q + F P + I SGYR+ +TN L + AR S H+ G+AVDF +PG+ R
Sbjct: 118 QAFVRRYGFVAP--VEITSGYRSPKTNARLIEKGLPAARNSLHLKGQAVDFRLPGLHPRV 175
Query: 170 LYKIAIRLKRGGVGYY------SKFLHIDVGRVRSW 199
L ++ + GGVG+Y ++H D G R W
Sbjct: 176 LGELVEGFRAGGVGFYFRVGAKGGWIHADTGPERVW 211
>gi|258545646|ref|ZP_05705880.1| peptidase M15 family nonpeptidase family protein [Cardiobacterium
hominis ATCC 15826]
gi|258519113|gb|EEV87972.1| peptidase M15 family nonpeptidase family protein [Cardiobacterium
hominis ATCC 15826]
Length = 207
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGS-QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
R +K++ TG F Y Q + +++R D+ Q + +D L + L +Q
Sbjct: 60 RMIKMFNPHTGESIRAVFWTPEYGYIQPAMDEISRFFRDFRQNQIVSVDIDLLNILHYMQ 119
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
I + SGYR+ TN ML+RR++ + ++S H+ +A D I G + R L +A
Sbjct: 120 SNVGNSSTIELHSGYRSPATNSMLARRSKNVGKQSYHMKAQAADISIQGYTSRQLRAMAQ 179
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
RL GG+G Y S F+H+D G +R+W
Sbjct: 180 RLNAGGIGIYRGSNFIHVDSGPIRTW 205
>gi|213420122|ref|ZP_03353188.1| hypothetical protein Salmonentericaenterica_21120 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 94
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
FD L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L
Sbjct: 1 FDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVAL 60
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 61 SNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 94
>gi|146329486|ref|YP_001209260.1| hypothetical protein DNO_0341 [Dichelobacter nodosus VCS1703A]
gi|146232956|gb|ABQ13934.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 207
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 85 LSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR 144
+ ++++ D+ +Q +D L + L IQ + I + SGYR+ +TN+MLSRR+
Sbjct: 88 IDEISKFFRDFRQQQIKTVDIDLLNILHYIQSNVGLNHSIQLNSGYRSPQTNRMLSRRSH 147
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A+KS H+ A D I G + R L IA RL GG+G Y S F+H+D G VR W
Sbjct: 148 SVAQKSYHMKAMAADITIDGFNSRQLKIIAKRLNAGGIGLYRNSNFIHVDSGPVREW 204
>gi|262165525|ref|ZP_06033262.1| lipoprotein putative [Vibrio mimicus VM223]
gi|262025241|gb|EEY43909.1| lipoprotein putative [Vibrio mimicus VM223]
Length = 81
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI L+ GGVG
Sbjct: 1 MHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQAGGVG 60
Query: 184 YY--SKFLHIDVGRVRSW 199
YY S+F+HID G VR W
Sbjct: 61 YYPKSRFIHIDTGPVRQW 78
>gi|146344295|ref|YP_001202151.1| hypothetical protein pQBR0405 [Pseudomonas fluorescens SBW25]
gi|146188107|emb|CAM96437.1| conserved hypothetical exported protein [Pseudomonas fluorescens
SBW25]
Length = 235
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 50 LLDQEEVRTLKIYVVSTGSKA-IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
LLD + R L + +G KA +++G ++ G + +L D SK+++ +D +L
Sbjct: 47 LLDHD--RFLDLERPQSGEKARFYYYRKGQGWDPRGYAIACTILRDVVSKKTVQIDAKLL 104
Query: 109 DFLWEIQQYFSV---PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
D LW Y V P I + SGYRT E N L A S HV KA D IPGV
Sbjct: 105 DLLWIATAYLRVKQLPAKIIVTSGYRTPEFNSSL----EGAALNSMHVKAKAADIRIPGV 160
Query: 166 SLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+L + + GGVG Y F+H+DVG VR+W
Sbjct: 161 GTEALANLIKVIGVGGVGTYISKNFVHLDVGSVRTW 196
>gi|330959641|gb|EGH59901.1| hypothetical protein PMA4326_13899 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 249
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 50 LLDQEEVRTLKIYVVSTGSKA-IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF 108
LLD + R L + +G KA +++G ++ G + +L D SK+++ +D +L
Sbjct: 61 LLDHD--RFLDLERPQSGEKARFYYYRKGQGWDPRGYAIACTILRDVVSKKTVQIDAKLL 118
Query: 109 DFLWEIQQYFSV---PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
D LW Y V P I + SGYRT E N L A S HV KA D IPGV
Sbjct: 119 DLLWIATAYLRVKQLPAQIIVTSGYRTPEFNSSL----EGAALNSMHVKAKAADIRIPGV 174
Query: 166 SLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+L + + GGVG Y F+H+DVG VR+W
Sbjct: 175 GTEALANLIKVIGVGGVGTYISKNFVHLDVGSVRTW 210
>gi|84517172|ref|ZP_01004528.1| hypothetical protein SKA53_03929 [Loktanella vestfoldensis SKA53]
gi|84509067|gb|EAQ05528.1| hypothetical protein SKA53_03929 [Loktanella vestfoldensis SKA53]
Length = 143
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 78 SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNK 137
+Y E + ++N + DW + +++ MD + D + + E +LSGYR+ TN
Sbjct: 18 GEYIAEAVREINLHMRDWRTGEAVQMDLRTIDIMSGALRLMETSEPYLLLSGYRSPATNA 77
Query: 138 MLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGR 195
ML R+ +AR S H+ G+A D + S+ + + A GGVG Y S F+H+D G
Sbjct: 78 MLRSRSSGVARDSLHMRGQAADLRLRSRSITQMAQAATAFNAGGVGRYGRSNFVHMDCGP 137
Query: 196 VRSW 199
VR+W
Sbjct: 138 VRTW 141
>gi|149915291|ref|ZP_01903819.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. AzwK-3b]
gi|149811012|gb|EDM70851.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. AzwK-3b]
Length = 189
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R L++ TG + Y ++ + +++ + DW + ++D + D +
Sbjct: 41 DIRRLRMTSPRTGESIDTIYWIEGDYIRDAVREVSLFMRDWRTNDVHNIDLRTIDIMAAA 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+ +AR S H+ G+A D + S+ +++ A
Sbjct: 101 HNLMDVTEPYMLLSGYRSPKTNAMLRSRSSGVARNSLHLQGEAADLRLNSRSVGQMFRAA 160
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVG Y S F+H+D G VR+W
Sbjct: 161 SACRGGGVGKYSGSNFVHMDCGPVRTW 187
>gi|167470671|ref|ZP_02335375.1| hypothetical protein YpesF_22992 [Yersinia pestis FV-1]
Length = 157
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 70/120 (58%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG F G YN++ LS+LN + D+ + + +DP+LFD L+ +Q
Sbjct: 38 RILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHIFRDYRANKVKKIDPRLFDQLYRLQV 97
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + ++SGYR+ TN L +R +A++S H G+A+DF+I G+ L + K A++
Sbjct: 98 LLETTKPVQLISGYRSLGTNNELREHSRGVAKQSYHTKGQAMDFHIEGIQLSYIRKAALK 157
>gi|241589949|ref|YP_002979974.1| protein of unknown function DUF882 [Ralstonia pickettii 12D]
gi|240868661|gb|ACS66320.1| protein of unknown function DUF882 [Ralstonia pickettii 12D]
Length = 194
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 87 QLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS---VPEYIYILSGYRTQETNKMLSRRN 143
Q LL D + + M+P L D L + +F+ + I + SGYRT TN R
Sbjct: 79 QCCTLLRDVRAGAVVQMNPTLLDILCGVYGWFAQAGIERPIVVTSGYRTPATNS----RA 134
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSWT 200
AR S H++G+A D +P V L ++ + L+ GGVGYY+ +F+H+D GR+R+W
Sbjct: 135 EGAARNSMHLVGRAADIRVPDVPTEYLARLGMYLRGGGVGYYATKQFVHVDSGRLRTWA 193
>gi|83952123|ref|ZP_00960855.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius nubinhibens ISM]
gi|83837129|gb|EAP76426.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius nubinhibens ISM]
Length = 143
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
+Y ++ + +++ + DW +D + D + E +LSGYR+ +TN M
Sbjct: 19 EYIKDAVQEISYFMRDWRLDAVKPIDTRTIDIMAAAHALVDTTEPYKMLSGYRSSKTNAM 78
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG--YYSKFLHIDVGRV 196
L R+R +AR+S H+ G+A D + S+ L + A + GGVG Y S F+H+D G +
Sbjct: 79 LRSRSRNVARQSLHITGQAADLRLSSRSVAQLSQAAQSCRAGGVGRYYRSNFVHMDCGDL 138
Query: 197 RSWT 200
RSW
Sbjct: 139 RSWN 142
>gi|149924367|ref|ZP_01912734.1| hypothetical protein PPSIR1_11888 [Plesiocystis pacifica SIR-1]
gi|149814755|gb|EDM74327.1| hypothetical protein PPSIR1_11888 [Plesiocystis pacifica SIR-1]
Length = 196
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 95 WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
W + + + +L + ++F V E + ++SG+R + N L ++ R++A +SQH
Sbjct: 88 WFTLEGGPISAELVARVIAAAEHFEVRE-VRVISGFRHPKYNLSLRKKGREVAERSQHTE 146
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
KA+DF++PGV R+LY + GGVG+Y S+F+H+D+GR R+W
Sbjct: 147 AKAIDFFLPGVDTRALYDWLLDTHDGGVGFYPVSEFVHVDLGRKRTW 193
>gi|329117911|ref|ZP_08246625.1| YegA like protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465992|gb|EGF12263.1| YegA like protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 183
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 19 VSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGS 78
VS A + ++L+ + + + + D E R+++ Y G
Sbjct: 12 VSAAGILFSDEAFALADNSGFWRRDRLLEMRRADTGERRSIRFYAAGRG----------- 60
Query: 79 QYNQEGLSQLNRLLYDWHSKQSI-DMDPQLFDFLWEIQQYFSV---PE-YIYILSGYRTQ 133
Y Q+G L D ++ ++D L + L+ +Q++ + P+ I + S YRT
Sbjct: 61 -YLQDGYLAARWFLRDAKDGNAVVNIDAGLLNLLYGLQEWARIAGKPDPLITVNSAYRTA 119
Query: 134 ETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
N + AR S H+ G+A D + G+SLR L +A K GG+G Y F+H+D
Sbjct: 120 RRNATIE----GAARNSMHIHGRAADLTMRGISLRQLADMAAHFKAGGIGIYDSFIHLDT 175
Query: 194 GRVRSW 199
GR+R+W
Sbjct: 176 GRIRNW 181
>gi|313681306|ref|YP_004059044.1| peptidase m15a [Sulfuricurvum kujiense DSM 16994]
gi|313154166|gb|ADR32844.1| Peptidase M15A [Sulfuricurvum kujiense DSM 16994]
Length = 181
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 36 DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDW 95
++I +S+ +D +++E+ + V+ G+ + F R + + G L R+ D
Sbjct: 21 NVIALSASTSLFADNKEKDEI----LSVIRNGTSYKIPFIRDGKIEENGYDDLCRVFADV 76
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFS---VPEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
+ ++ MDP LF L + QQ+ S + I + SGYRT+ TN + A S H
Sbjct: 77 RAGVAVRMDPNLFLILTKAQQWLSSNHINRPIILTSGYRTEHTNSI----TEGAAFNSMH 132
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
+ GKA D I G+ L ++ G+G Y F+H+D R R+W
Sbjct: 133 LYGKAADIKIEGIPADYLARLLRMCGGAGIGIYPTFVHVDTWRERAW 179
>gi|134288294|ref|YP_001110457.1| hypothetical protein Bcep1808_6766 [Burkholderia vietnamiensis G4]
gi|134132944|gb|ABO59654.1| protein of unknown function DUF882 [Burkholderia vietnamiensis G4]
Length = 174
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Query: 84 GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE---YIYILSGYRTQETNKMLS 140
G + + RL+ D H+ +++ M P LFD L+ +Q +F++ I + SGYRT+ TN+ +
Sbjct: 57 GYAAICRLMRDTHADKAVQMSPVLFDILYGMQGFFALHNQHRVIVLNSGYRTRLTNEAVG 116
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRS 198
S+H+ G+A D PGV + + ++A+ L+ GGVG+Y F+H+D G +R
Sbjct: 117 G-----VGDSRHMRGEAADIEFPGVPVNYMGRLALYLQGGGVGFYPSRGFVHVDDGALRK 171
Query: 199 WT 200
W
Sbjct: 172 WN 173
>gi|254462447|ref|ZP_05075863.1| twin-arginine translocation pathway signal [Rhodobacterales
bacterium HTCC2083]
gi|206679036|gb|EDZ43523.1| twin-arginine translocation pathway signal [Rhodobacteraceae
bacterium HTCC2083]
Length = 189
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S + L ++R +K+Y TG + + + +Y +E + +++ + DW + + +
Sbjct: 30 GSAAGFLRGGGDIRRIKMYSGRTGERIDMIYWVEGKYIKEAVQEVHHFMRDWRTNEVKFI 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + E +LSGYR+ +TN ML R++ +A+ S H+ G+A D +
Sbjct: 90 DLRTIDVMAAAHNLLGSNEPYMLLSGYRSPKTNNMLRSRSKGVAKNSLHMKGQAADLRLS 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ + + A K GGVG Y S F+H+D G VR W
Sbjct: 150 SRSVSQVSRAATACKGGGVGRYSGSNFVHMDCGPVRVW 187
>gi|78045353|ref|YP_361603.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78033857|emb|CAJ19856.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 206
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKY-HQQSSMSSDLLDQEEVRTLKIYVVSTG 67
+L+ I G+ ++ + V SP ++ S ++ Y H + S+ Q R L+++ ++
Sbjct: 13 LLRSIASGI-AAMGTGAVLSPAFARSGFVMPYGHADAYTSATFWAQP--RVLRLHRPASN 69
Query: 68 SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY----FSVPEY 123
+ R Q + G ++ RLL D + Q+ +D +L + L +Q + + + +
Sbjct: 70 ETVDACYWRDGQLDSAGYIRICRLLRDVQAGQAATIDMRLLNLLRGMQGWVEASYGIRDP 129
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+ SGYRTQ TNK AR S H+ G+AVD PG+ L + + GGVG
Sbjct: 130 YQVNSGYRTQATNK----STEGAARHSLHMKGQAVDGLHPGLPLEYTGNLFKAFQGGGVG 185
Query: 184 YY---SKFLHIDVGRVRSW 199
+Y KF+H DVG VR W
Sbjct: 186 FYLNSKKFIHADVGSVRQW 204
>gi|89068812|ref|ZP_01156195.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola granulosus HTCC2516]
gi|89045582|gb|EAR51645.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola granulosus HTCC2516]
Length = 143
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + QY + L ++N + DW + Q +D + D V
Sbjct: 1 MYNGRTGEQIDMIYWIDGQYIADALQEVNHFMRDWRNGQVAPIDTRTIDIATAAHNLMDV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E ++SGYR+ +TN ML + +A+ S H+ G+A D + S+ + + A + G
Sbjct: 61 SEPYTLISGYRSPQTNAMLRSNSSGVAKNSLHLQGQAADLRLSSRSVSQMAQAAAACRAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VRSW
Sbjct: 121 GVGRYSGSNFVHMDCGAVRSW 141
>gi|289825304|ref|ZP_06544576.1| hypothetical protein Salmonellentericaenterica_07926 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 78
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++ K A+ ++ GGVGYY
Sbjct: 3 LISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYY 62
Query: 186 --SKFLHIDVGRVRSW 199
S F+HID G R W
Sbjct: 63 PRSNFVHIDTGPARHW 78
>gi|217970213|ref|YP_002355447.1| hypothetical protein Tmz1t_1799 [Thauera sp. MZ1T]
gi|217507540|gb|ACK54551.1| protein of unknown function DUF882 [Thauera sp. MZ1T]
Length = 187
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
T + V F+ Y Q L +++ LL D+ + +S MDP+L+D L + +
Sbjct: 47 TDERLSVAFRNRQGYIQPALQRIDWLLRDFRTGESTRMDPRLYDMLHALSLACGGNTF-E 105
Query: 126 ILSGYRTQETNKMLSR-RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
I+SGYR+ TN ML + R +AR+S H+ GKA+D + GV L A+ L GGVGY
Sbjct: 106 IISGYRSPTTNTMLRKTRGGGVARRSLHMDGKAIDIRLVGVDTARLRDAALALGGGGVGY 165
Query: 185 Y--SKFLHIDVGRVRSW 199
Y S F+HID G VRSW
Sbjct: 166 YPDSDFVHIDTGPVRSW 182
>gi|134287977|ref|YP_001110141.1| hypothetical protein Bcep1808_7376 [Burkholderia vietnamiensis G4]
gi|134132627|gb|ABO60253.1| protein of unknown function DUF882 [Burkholderia vietnamiensis G4]
Length = 173
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 72 VTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE----YIYIL 127
V + G +++ +L L D + ++DP+LF L+ +Q++ + I +
Sbjct: 37 VVYWSGGRFDANNYVRLCYLFRDSNEDVVAEIDPRLFHLLFGLQRWVQLETGRLLPIDLT 96
Query: 128 SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK 187
SGYRT E N ML + S+H+ G+A D IPGV ++ +A + GGVG Y+
Sbjct: 97 SGYRTPEHNSMLIAEG--ASPTSEHLNGRAADIKIPGVQPGAVVSMARFFEMGGVGIYNS 154
Query: 188 FLHIDVGRVRSWT 200
F H+DVGRVR++T
Sbjct: 155 FTHVDVGRVRAFT 167
>gi|240126801|ref|ZP_04739687.1| YegA [Neisseria gonorrhoeae SK-92-679]
gi|268685378|ref|ZP_06152240.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|295788812|ref|YP_003600427.1| YegA [Neisseria gonorrhoeae]
gi|268625662|gb|EEZ58062.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|294769553|gb|ADF36628.1| YegA [Neisseria gonorrhoeae]
gi|317165598|gb|ADV09137.1| YegA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 186
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEG---LSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
R L IY ++ + + F QY QEG L + R + D H +I+++ L + L+
Sbjct: 41 RVLSIYRPASRERKNIKFFADGQYIQEGYKALCWMMRDVVDNHQMHAININ--LINLLFA 98
Query: 114 IQQYF-----SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
QQY PE + + SG+RT+ N L A+ SQH+ G A DF+I SL
Sbjct: 99 QQQYLRDLGRPNPELV-LHSGFRTRRHNDSLE----GAAKNSQHLSGNAGDFHIERASLS 153
Query: 169 SLYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
L +A R + GG+G Y F+H D+G R W
Sbjct: 154 ELAALARRFRVGGIGIYPTFIHNDIGVYREW 184
>gi|163746380|ref|ZP_02153738.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanibulbus indolifex HEL-45]
gi|161380265|gb|EDQ04676.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanibulbus indolifex HEL-45]
Length = 181
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++Y TG + + + Y ++ +++N + DW + + +MD + D +
Sbjct: 33 DIRRIRMYSGRTGERLDMIYWIEGHYIKDAFAEINHFMRDWRTDEVTNMDLRTVDIMAAS 92
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+ +A+ S H+ G+A D + S+ + + A
Sbjct: 93 HNLLDVNEPYMLLSGYRSPKTNAMLRSRSSGVAKNSLHLKGQAADLRLASRSVHQVARAA 152
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVG Y S F H+D G VRSW
Sbjct: 153 VACGGGGVGRYSGSNFTHMDCGNVRSW 179
>gi|226330680|ref|ZP_03806198.1| hypothetical protein PROPEN_04600 [Proteus penneri ATCC 35198]
gi|225201475|gb|EEG83829.1| hypothetical protein PROPEN_04600 [Proteus penneri ATCC 35198]
Length = 85
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+ ++SGYR+ TN L + + +A+KS H G+A+DF + G L + ++A+R+K GGVG
Sbjct: 8 VELISGYRSLVTNNNLRQSSSGVAKKSYHTRGQAMDFRLVGTELSKVRQVALRMKAGGVG 67
Query: 184 YY--SKFLHIDVGRVRSW 199
YY S F+HID G VRSW
Sbjct: 68 YYPRSNFVHIDTGPVRSW 85
>gi|149203869|ref|ZP_01880838.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. TM1035]
gi|149142986|gb|EDM31028.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. TM1035]
Length = 189
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
++R +++ TG + + Y +E + +++ + DW + Q ++D + D +
Sbjct: 41 DIRRIRLVSPRTGERLDTIYWIEGDYLKEAVREISLFMRDWRTNQVKNIDIRTIDIMAAS 100
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
V E +LSGYR+ +TN ML R+ +AR S H++G+A D + S+ +Y+
Sbjct: 101 HNLLDVSEPYTLLSGYRSAQTNAMLRSRSNGVARNSLHMVGEAADLRLGSRSVSQIYRAG 160
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVG Y S F+H+D G VR+W
Sbjct: 161 VACGGGGVGRYSGSNFVHMDCGPVRTW 187
>gi|325271517|ref|ZP_08138034.1| putative secreted protein [Pseudomonas sp. TJI-51]
gi|324103364|gb|EGC00694.1| putative secreted protein [Pseudomonas sp. TJI-51]
Length = 206
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLI--KYHQQSSMSSDLLDQEEVRTLKIYVVST 66
+LK + + +F ++P+ + + L+ Y Q+ ++ + R L +Y ST
Sbjct: 12 LLKRSVVAGITGMGAFTFSAPLLASTGLLLPANYANQADAAAFW---AKPRVLNLYRPST 68
Query: 67 GSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVP----E 122
G + + R + G + +L D + ++ ++D +L + L Q + + E
Sbjct: 69 GEHKQICYWRDGHLDLAGYREACHMLRDVRAGKATEIDLRLLNLLRGQQGWLELAYGFKE 128
Query: 123 YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV 182
+ SGYRT+ETN+ AR S H G+A D P + + ++ + GGV
Sbjct: 129 PYQVNSGYRTKETNEA----TEGAARDSYHTKGQACDGKFPSLPIEYQGRLMSAFRTGGV 184
Query: 183 GYY---SKFLHIDVGRVRSW 199
G+Y KF+H DVGRVR W
Sbjct: 185 GFYINRQKFIHSDVGRVRYW 204
>gi|85702798|ref|ZP_01033902.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. 217]
gi|85671726|gb|EAQ26583.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. 217]
Length = 189
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
SS + L ++R +++ TG + + Y +E + +++ + DW + Q ++
Sbjct: 30 SSAAGFLRGAGDIRRIRLVSPRTGERLDTIYWIEGDYLKEAVREISLFMRDWRTNQVRNI 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + E +LSGYR+ +TN ML R+ +A+ S H++G+A D +
Sbjct: 90 DIRTIDIMAASHNLLDASEPYTLLSGYRSAQTNAMLRSRSGGVAKNSLHMVGEAADLRLG 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ +Y+ + GGVG Y S F+H+D G VR+W
Sbjct: 150 SRSVSQIYRAGVACGAGGVGRYSGSNFVHMDCGPVRTW 187
>gi|121582884|ref|YP_973326.1| hypothetical protein Pnap_4302 [Polaromonas naphthalenivorans CJ2]
gi|120596146|gb|ABM39584.1| protein of unknown function DUF882 [Polaromonas naphthalenivorans
CJ2]
Length = 180
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
RTL +Y +T T+ + +L LL D + Q++ M D L IQ
Sbjct: 35 RTLHLYRPATRETVHATYFANGEVILCEYEKLCILLRDVQAGQAVQMSLVTLDILAGIQG 94
Query: 117 YF---SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ + ++ SGYR+ TN A+ S+H+ G A D +P VS SL +
Sbjct: 95 WLRANGINSPLHTNSGYRSPLTNN----HTEGAAKNSRHMYGMAWDGRVPQVSTESLARF 150
Query: 174 AIRLKRGGVGYYSK--FLHIDVGRVRSW 199
A+ LK GGVG+Y + FLHID G +R+W
Sbjct: 151 AVYLKGGGVGFYQEKNFLHIDSGSLRTW 178
>gi|268601334|ref|ZP_06135501.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|291043836|ref|ZP_06569552.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|268585465|gb|EEZ50141.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|291012299|gb|EFE04288.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 194
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 18 YVSVASFFVTSPIYSLSP-DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSK-AIVTFK 75
+V V + + T L P D++ +SM+ D ++ RT+ TG K I F+
Sbjct: 14 FVGVGALYTTGAAGLLLPKDVVA---ATSMA-DFWSRD--RTINCKRADTGEKHEIRFFQ 67
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQS-IDMDPQLFDFLWEIQQYF-----SVPEYIYILSG 129
+ + Y+ + L+ D + + +D L + ++ +Q++ S P I I S
Sbjct: 68 QQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAMQEWARQSGRSNP-VITINSA 126
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFL 189
YRT N + AR S H+ GKAVDF + GV + L ++A GG+G Y+ F+
Sbjct: 127 YRTPRRNATIE----GAARNSLHMRGKAVDFTMRGVGIGELEQMAKYYNVGGIGIYNSFV 182
Query: 190 HIDVGRVRSW 199
H+D GRVR W
Sbjct: 183 HLDTGRVRHW 192
>gi|194098604|ref|YP_002001666.1| YegA [Neisseria gonorrhoeae NCCP11945]
gi|240080733|ref|ZP_04725276.1| YegA [Neisseria gonorrhoeae FA19]
gi|240112898|ref|ZP_04727388.1| YegA [Neisseria gonorrhoeae MS11]
gi|240115653|ref|ZP_04729715.1| YegA [Neisseria gonorrhoeae PID18]
gi|240117947|ref|ZP_04732009.1| YegA [Neisseria gonorrhoeae PID1]
gi|240123506|ref|ZP_04736462.1| YegA [Neisseria gonorrhoeae PID332]
gi|240128205|ref|ZP_04740866.1| YegA [Neisseria gonorrhoeae SK-93-1035]
gi|260440534|ref|ZP_05794350.1| YegA [Neisseria gonorrhoeae DGI2]
gi|268596853|ref|ZP_06131020.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268682135|ref|ZP_06148997.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|193933894|gb|ACF29718.1| YegA [Neisseria gonorrhoeae NCCP11945]
gi|268550641|gb|EEZ45660.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268622419|gb|EEZ54819.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 190
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 18 YVSVASFFVTSPIYSLSP-DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSK-AIVTFK 75
+V V + + T L P D++ +SM+ D ++ RT+ TG K I F+
Sbjct: 10 FVGVGALYTTGAAGLLLPKDVVA---ATSMA-DFWSRD--RTINCKRADTGEKHEIRFFQ 63
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQS-IDMDPQLFDFLWEIQQYF-----SVPEYIYILSG 129
+ + Y+ + L+ D + + +D L + ++ +Q++ S P I I S
Sbjct: 64 QQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAMQEWARQSGRSNP-VITINSA 122
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFL 189
YRT N + AR S H+ GKAVDF + GV + L ++A GG+G Y+ F+
Sbjct: 123 YRTPRRNATIE----GAARNSLHMRGKAVDFTMRGVGIGELEQMAKYYNVGGIGIYNSFV 178
Query: 190 HIDVGRVRSW 199
H+D GRVR W
Sbjct: 179 HLDTGRVRHW 188
>gi|58891418|gb|AAW83106.1| YegA [Neisseria gonorrhoeae]
Length = 196
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 18 YVSVASFFVTSPIYSLSP-DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSK-AIVTFK 75
+V V + + T L P D++ +SM+ D ++ RT+ TG K I F+
Sbjct: 16 FVGVGALYTTGAAGLLLPKDVVA---ATSMA-DFWSRD--RTINCKRADTGEKHEIRFFQ 69
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQS-IDMDPQLFDFLWEIQQYF-----SVPEYIYILSG 129
+ + Y+ + L+ D + + +D L + ++ +Q++ S P I I S
Sbjct: 70 QQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAMQEWARQSGRSNP-VITINSA 128
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFL 189
YRT N + AR S H+ GKAVDF + GV + L ++A GG+G Y+ F+
Sbjct: 129 YRTPRRNATIE----GAARNSLHMRGKAVDFTMRGVGIGELEQMAKYYNVGGIGIYNSFV 184
Query: 190 HIDVGRVRSW 199
H+D GRVR W
Sbjct: 185 HLDTGRVRHW 194
>gi|268598981|ref|ZP_06133148.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268603660|ref|ZP_06137827.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268686603|ref|ZP_06153465.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268583112|gb|EEZ47788.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268587791|gb|EEZ52467.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268626887|gb|EEZ59287.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 155
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 57 RTLKIYVVSTGSK-AIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS-IDMDPQLFDFLWEI 114
RT+ TG K I F++ + Y+ + L+ D + + +D L + ++ +
Sbjct: 9 RTINCKRADTGEKHEIRFFQQQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAM 68
Query: 115 QQYF-----SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
Q++ S P I I S YRT N + AR S H+ GKAVDF + GV +
Sbjct: 69 QEWARQSGRSNP-VITINSAYRTPRRNATIE----GAARNSLHMRGKAVDFTMRGVGIGE 123
Query: 170 LYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
L ++A GG+G Y+ F+H+D GRVR W
Sbjct: 124 LEQMAKYYNVGGIGIYNSFVHLDTGRVRHW 153
>gi|124262600|ref|YP_001023070.1| hypothetical protein Mpe_B0056 [Methylibium petroleiphilum PM1]
gi|124261846|gb|ABM96835.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 234
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSV---PEYIYILSGYRTQETNKMLSRRNRKIA 147
+L D + + + MDP+L D L IQ++ I +LSG+RT TN+ A
Sbjct: 117 MLRDVRAGKVVAMDPKLLDVLCGIQRWMEFNGRTADIELLSGFRTGVTNQA----TEGAA 172
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
R S H+ GKA D +I G S + + RGG G Y F+H+D G R+W
Sbjct: 173 RNSMHLYGKAADIHIDGASSALVGAMVQVFNRGGTGVYLNRGFVHVDTGAQRTW 226
>gi|121591906|ref|ZP_01679054.1| Tat [Vibrio cholerae 2740-80]
gi|121546233|gb|EAX56545.1| Tat [Vibrio cholerae 2740-80]
Length = 78
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 136 NKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDV 193
+K L +++ +A+KS H+ G+A+DF + GVSL+ + + AI L+ GGVGYY S+F+HID
Sbjct: 10 HKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSQFIHIDT 69
Query: 194 GRVRSW 199
G VR W
Sbjct: 70 GPVRQW 75
>gi|308274779|emb|CBX31378.1| hypothetical protein N47_E48900 [uncultured Desulfobacterium sp.]
Length = 313
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 80 YNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
Y++ L Q+ ++ S + +L +F+ +Q I I SGYR E N L
Sbjct: 61 YDESALKQICQVFDAPDSAPMTHLSLRLIEFIDFLQDRLGPGRQITITSGYRNPEYNTGL 120
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRS 198
+ A+ S H G A DF I GV+ + L+ L GG GYY K +HIDVG RS
Sbjct: 121 RNKGGLAAKASLHQYGMAADFMIEGVNSKFLWNYVKALGFGGAGYYHGKTVHIDVGPARS 180
Query: 199 W 199
W
Sbjct: 181 W 181
>gi|304415071|ref|ZP_07395811.1| peptidase M15 domain-containing hypothetical protein [Candidatus
Regiella insecticola LSR1]
gi|304283075|gb|EFL91498.1| peptidase M15 domain-containing hypothetical protein [Candidatus
Regiella insecticola LSR1]
Length = 143
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 60/145 (41%), Gaps = 51/145 (35%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
RTLK+ + TG F G YN+E L++LN
Sbjct: 48 RTLKLNNIHTGESIKAEFSNGIGYNKEELTRLN--------------------------- 80
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
Y +R E S H +GKA D I G+SL + + A+R
Sbjct: 81 --------YFFRDFRQNEN--------------SLHKVGKAADLRIEGISLNHIRQAALR 118
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
++ GGVGYY S FLHID GRVR+W
Sbjct: 119 MRAGGVGYYPKSNFLHIDTGRVRTW 143
>gi|23009460|ref|ZP_00050498.1| COG3108: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 381
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 11/72 (15%)
Query: 140 SRRNRKIA-------RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
+RR R A R SQH+LGKA+DF++ S+ + I +R++RGGVG+Y S F
Sbjct: 9 ARRQRNAAPPLLGRGRDSQHMLGKAMDFFMTDASIDQIRAIGMRMQRGGVGWYPRSGSPF 68
Query: 189 LHIDVGRVRSWT 200
+H+DVG VRSW
Sbjct: 69 VHLDVGSVRSWP 80
>gi|150388698|ref|YP_001318747.1| peptidase M15A [Alkaliphilus metalliredigens QYMF]
gi|149948560|gb|ABR47088.1| Peptidase M15A [Alkaliphilus metalliredigens QYMF]
Length = 119
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q + +D QL + L +++ + P I + SGYRT E N+ + + SQH+LG+A
Sbjct: 22 QLVKLDHQLLEKLQQLRNQVNAP--INLTSGYRTPEHNQRVGG-----SPNSQHLLGRAA 74
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
D +PG S ++ K+A ++ G+G YS F H+DV
Sbjct: 75 DIQVPGHSPEAIAKMAEKIGFAGIGIYSTFTHVDV 109
>gi|121610615|ref|YP_998422.1| hypothetical protein Veis_3688 [Verminephrobacter eiseniae EF01-2]
gi|121555255|gb|ABM59404.1| protein of unknown function DUF882 [Verminephrobacter eiseniae
EF01-2]
Length = 179
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF-----SVPEYIYILSGYRTQETNK 137
+G RLL D + Q++ M L D L IQ + S+P + SGYR+ TN
Sbjct: 60 DGYLAACRLLRDVRAGQAVQMSVVLLDILCGIQGFLRAYGHSIP--LLTTSGYRSPATNA 117
Query: 138 MLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGR 195
+ R S H+ G+A D + GV L +IA L+ GGVG Y FLH+D GR
Sbjct: 118 SIE----GAVRSSMHIQGRAWDGRMQGVPADLLARIATYLQGGGVGLYQGRGFLHVDDGR 173
Query: 196 VRSW 199
+R W
Sbjct: 174 LRFW 177
>gi|218533449|ref|YP_002424264.1| hypothetical protein Mchl_5604 [Methylobacterium chloromethanicum
CM4]
gi|218525752|gb|ACK86336.1| protein of unknown function DUF882 [Methylobacterium
chloromethanicum CM4]
Length = 212
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 103 MDPQLFDFLWEIQQYFS------VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+DP+LFD L +Q S VP + + SGYRT + N + AR S H+ G+
Sbjct: 91 IDPRLFDLLASVQGAMSAVHGAVVP--LIVTSGYRTPQHNAGIE----GAARASLHLAGR 144
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSWT 200
A D G ++ RGGVG Y F H+D+G+ R W
Sbjct: 145 AADLRAAGYGADAVAVAGALCGRGGVGIYPGFCHLDIGKARVWA 188
>gi|301059660|ref|ZP_07200568.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300446226|gb|EFK10083.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 320
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 73 TFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYR 131
T++ G Y+++ L+++ R+ + +L +F+ ++ + + I I+SGYR
Sbjct: 61 TYRNGLGSYDKKALNEICRVFDAPRDPSQTGLSLRLIEFIDYLEDHLNRGAKITIISGYR 120
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLH 190
E N L + + A+ S H G A D I GV +L+ L+ GG GYY +H
Sbjct: 121 RPEYNTKLREKGKLAAKASLHQYGMAADLKIQGVKAEALWHYVRDLEFGGTGYYHGSVVH 180
Query: 191 IDVGRVRSW 199
IDVG R W
Sbjct: 181 IDVGPARFW 189
>gi|254558220|ref|YP_003065745.1| hypothetical protein p1METDI0138 [Methylobacterium extorquens DM4]
gi|254265763|emb|CAX17126.1| conserved hypothetical protein, putative exported protein (Tat
pathway sequence) [Methylobacterium extorquens DM4]
Length = 216
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 103 MDPQLFDFLWEIQQYFS------VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+DP LFD L +Q S VP + + SGYRT + N + AR S H+ G
Sbjct: 95 IDPHLFDLLASVQGAMSAVHGAVVP--LIVTSGYRTPQHNAGI----EGAARASLHLAGC 148
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSWT 200
A D G ++ RGGVG Y F H+D+G+ R W
Sbjct: 149 AADLRAAGYGADAVAVAGALCGRGGVGIYPGFCHLDIGKARVWA 192
>gi|91791167|ref|YP_552117.1| hypothetical protein Bpro_5363 [Polaromonas sp. JS666]
gi|91701048|gb|ABE47219.1| protein of unknown function DUF882 [Polaromonas sp. JS666]
Length = 234
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 103 MDPQLFDFLWEIQQY---FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
MDP + D L+ + + V + + SG+R +N++ A S H AVD
Sbjct: 135 MDPVVLDILYAYSAWLHVYGVTRPLMVTSGFRHFISNEL----TEGAALASWHPKAGAVD 190
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
FY+PGV + + L GGVG Y K F H+D GRVRSW
Sbjct: 191 FYVPGVPVEQTARFGQWLAGGGVGLYLKKNFTHVDRGRVRSW 232
>gi|114706190|ref|ZP_01439093.1| hypothetical protein FP2506_17029 [Fulvimarina pelagi HTCC2506]
gi|114539036|gb|EAU42157.1| hypothetical protein FP2506_17029 [Fulvimarina pelagi HTCC2506]
Length = 303
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
QL + I+Q F + + + SGYR+ E N+ + + A+ SQH+ KA D IP
Sbjct: 206 QLVGMIRAIEQRFG--QRVVVTSGYRSPEHNRRV-----RGAKASQHMACKAADIVIPNA 258
Query: 166 SLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSWT 200
+ R++ L RGGVG Y +K +HIDVG R W
Sbjct: 259 NNRAVAAFVKSLPGRGGVGTYCHTKAIHIDVGPKREWN 296
>gi|213022682|ref|ZP_03337129.1| hypothetical protein Salmonelentericaenterica_08623 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 55
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 147 ARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+KS H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 1 AKKSYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 55
>gi|150389908|ref|YP_001319957.1| peptidase M15A [Alkaliphilus metalliredigens QYMF]
gi|149949770|gb|ABR48298.1| Peptidase M15A [Alkaliphilus metalliredigens QYMF]
Length = 119
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
Q + +D +L + L +++ P + + SG+RT E NK + + SQH+LG+
Sbjct: 20 GSQLVKLDHRLIEKLQQLRDQVGSP--VIVTSGFRTPEHNKRVGG-----SLNSQHLLGR 72
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
A D +PG S ++ +IA L GVG Y+ F H+DV
Sbjct: 73 AADIQVPGYSPEAIAQIADALGFTGVGIYATFTHVDV 109
>gi|218672844|ref|ZP_03522513.1| hypothetical protein RetlG_15022 [Rhizobium etli GR56]
Length = 401
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSWT 200
GKA+DF+IP V L ++ I ++++ GGVG+Y K F+H+DVG VR+W
Sbjct: 1 GKAMDFFIPDVKLATIRAIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAWP 50
>gi|58616275|ref|YP_195404.1| putative outer membrane protein [Azoarcus sp. EbN1]
gi|56315736|emb|CAI10380.1| putative outer membrane protein [Aromatoleum aromaticum EbN1]
Length = 178
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS---VPEYIYILSGYRTQETNKML 139
+G++ L LL D + + + PQ+ L +Q + + + I SG RT+ TN+ +
Sbjct: 52 KGIAYLQYLLRDVRANRQGLVHPQIVSNLAWVQAWLAHWGLKAPIVATSGLRTEVTNREV 111
Query: 140 SRRNRKIARKSQHV-----LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHID 192
A +SQH+ + +AVDF++PG + + ++ + GGVG+Y SK +H+D
Sbjct: 112 GG-----AHQSQHLPDNNGVFRAVDFWVPGANSEDVARMLEWARTGGVGFYRSSKHIHLD 166
Query: 193 VGRVRSW 199
GR RSW
Sbjct: 167 AGRPRSW 173
>gi|262196378|ref|YP_003267587.1| hypothetical protein Hoch_3192 [Haliangium ochraceum DSM 14365]
gi|262079725|gb|ACY15694.1| protein of unknown function DUF882 [Haliangium ochraceum DSM 14365]
Length = 273
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 78 SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNK 137
+ + E L+QL+ L + + +DP+L++ L I +F + I ++SG+R QE
Sbjct: 134 GELDPEALAQLDHLFRCRRTGEERAVDPRLYEILSTIYDHFGQ-QRIELVSGFRDQEN-- 190
Query: 138 MLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY----YSKFLHID 192
+ S+H A+D IPGV +R LY+ A L GG+G S F+H+D
Sbjct: 191 ----------QGSRHFHASAMDIKIPGVPMRKLYEYATSLDAGGMGIGKYPRSGFVHVD 239
>gi|153009244|ref|YP_001370459.1| peptidase M15A [Ochrobactrum anthropi ATCC 49188]
gi|151561132|gb|ABS14630.1| Peptidase M15A [Ochrobactrum anthropi ATCC 49188]
Length = 421
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + PQL L ++++F P + + SGYR+ N+ ++ ARKS H++
Sbjct: 315 RQTVDVACLKPQLVSMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARKSLHMI 367
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + RGGVG Y + +H+DVG R W
Sbjct: 368 CAAADIQIDGVSKWEVARFARSMSGRGGVGTYCHTTSVHVDVGPERDW 415
>gi|239832163|ref|ZP_04680492.1| Titin [Ochrobactrum intermedium LMG 3301]
gi|239824430|gb|EEQ95998.1| Titin [Ochrobactrum intermedium LMG 3301]
Length = 452
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + PQL L ++++F P + + SGYR+ N+ ++ ARKS H++
Sbjct: 346 RQTVDVACLKPQLVSMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARKSLHMI 398
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + RGGVG Y + +H+DVG R W
Sbjct: 399 CAAADIQIDGVSKWEIARFARSMPGRGGVGTYCHTTSVHVDVGPERDW 446
>gi|313113761|ref|ZP_07799335.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623933|gb|EFQ07314.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 140
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L + L +I+ +F P + I SG+RT N + + A+ SQH+ GKA D +I
Sbjct: 36 IDSELVEILQKIRNHFGKP--VNITSGFRTASKNATI----KNAAKFSQHLYGKAADIWI 89
Query: 163 PGVSLRSLYKIAIRL--KRGGVGYYSKFLHIDVGRVRSW 199
GV++ + A L RGG+G Y K H D R W
Sbjct: 90 SGVTVEQIAAYAETLLPNRGGIGRYPKEGHAD--RTHGW 126
>gi|116750294|ref|YP_846981.1| hypothetical protein Sfum_2869 [Syntrophobacter fumaroxidans MPOB]
gi|116699358|gb|ABK18546.1| protein of unknown function DUF882 [Syntrophobacter fumaroxidans
MPOB]
Length = 497
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 59 LKIYVVSTGSKAIVTF--KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
L I + TG +A V+ GS +++G +++ + +++ + P+L L
Sbjct: 224 LHIKNMHTGREASVSLLMPDGS-LDEKGFDRVDEVFGFPTAEKGEHISPRLIFMLDYFSD 282
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + I ++S YR+ + N L +AR S H+ G A+DF IPGV ++L++I
Sbjct: 283 LAAPGKTIRMVSAYRSPDYNSSLRNAGGNVARTSLHIDGMALDFNIPGVDGKALWQIIKE 342
Query: 177 LKRGGVGYYSKF-LHIDVGRVRSW 199
GVG+Y +H+D R R W
Sbjct: 343 KNCCGVGHYGGANIHLDSARPRFW 366
>gi|313116359|gb|ADR32167.1| conserved hypothetical protein [Campylobacter jejuni]
Length = 131
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH LG A
Sbjct: 25 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNAEIGG-----APKSQHTLGSAA 76
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ F+H+D G+ WT
Sbjct: 77 DFVVKGVKTEEVHQYVLNTYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 129
>gi|303229294|ref|ZP_07316089.1| peptidase M15 [Veillonella atypica ACS-134-V-Col7a]
gi|302516067|gb|EFL58014.1| peptidase M15 [Veillonella atypica ACS-134-V-Col7a]
Length = 153
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
H+K +D +L D L I++ VP +YI SGYR E N + SQHVLG
Sbjct: 50 HNKLDHIIDKRLVDLLDAIRERLGVP--LYINSGYRCPEHNAEVGG-----VSNSQHVLG 102
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVG--YYSKFLHIDV-GRVRSWT 200
A D G+ + L ++A G+G Y+ F+H+DV G W
Sbjct: 103 TAADITYAGIDVDYLAQVAEECGADGIGCYYHQDFVHVDVRGYAARWN 150
>gi|163760325|ref|ZP_02167408.1| hypothetical protein HPDFL43_08684 [Hoeflea phototrophica DFL-43]
gi|162282724|gb|EDQ33012.1| hypothetical protein HPDFL43_08684 [Hoeflea phototrophica DFL-43]
Length = 364
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKI--ARKSQHVLGKAVDFYI 162
PQL L ++Q++ P + + SGYR+ +RNR+I A S+H +A D I
Sbjct: 266 PQLVRVLKTVEQHYGRP--VVVTSGYRS-------PKRNRRIGGASGSRHTSCEAADIQI 316
Query: 163 PGVSLRSLYK-IAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GVS L K + RGGVG Y ++ +HID+G R W
Sbjct: 317 EGVSKWQLAKYLRTMPNRGGVGTYCHTESVHIDIGNPRDW 356
>gi|322649620|gb|EFY46051.1| hypothetical protein SEEM675_16029 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 147
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANKVRSIDPRLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L+ +Q + + ++SGYR+ +TN L R+ +A+K+
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKA 131
>gi|320353711|ref|YP_004195050.1| peptidase M15A [Desulfobulbus propionicus DSM 2032]
gi|320122213|gb|ADW17759.1| Peptidase M15A [Desulfobulbus propionicus DSM 2032]
Length = 308
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
I I S YR+ E N + + AR S H+ G A+DF++ GV + L++ + GG+G
Sbjct: 104 INIESAYRSPEYNDQIRAQGNNAARTSTHMDGLALDFWLEGVDGKQLWETIRQKNCGGIG 163
Query: 184 YY-SKFLHIDVGRVRSW 199
+Y K +H D GR R W
Sbjct: 164 HYGGKTVHFDAGRPRFW 180
>gi|261222430|ref|ZP_05936711.1| peptidase M15A [Brucella ceti B1/94]
gi|265998397|ref|ZP_06110954.1| peptidase M15A [Brucella ceti M490/95/1]
gi|260921014|gb|EEX87667.1| peptidase M15A [Brucella ceti B1/94]
gi|262552865|gb|EEZ08855.1| peptidase M15A [Brucella ceti M490/95/1]
Length = 430
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 324 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 376
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
A D I GVS + + A + +RGGVG Y + +H+DVG R W+
Sbjct: 377 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDWS 425
>gi|256160017|ref|ZP_05457722.1| Side tail fiber protein [Brucella ceti M490/95/1]
gi|256255234|ref|ZP_05460770.1| Side tail fiber protein [Brucella ceti B1/94]
Length = 390
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 284 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 336
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
A D I GVS + + A + +RGGVG Y + +H+DVG R W+
Sbjct: 337 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDWS 385
>gi|306840258|ref|ZP_07473032.1| Side tail fiber protein [Brucella sp. BO2]
gi|306289785|gb|EFM60967.1| Side tail fiber protein [Brucella sp. BO2]
Length = 426
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 320 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 372
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 373 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 420
>gi|306844181|ref|ZP_07476774.1| Side tail fiber protein [Brucella sp. BO1]
gi|306275456|gb|EFM57193.1| Side tail fiber protein [Brucella sp. BO1]
Length = 408
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 302 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 354
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 355 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 402
>gi|86151531|ref|ZP_01069745.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124245|ref|YP_004066249.1| hypothetical protein ICDCCJ07001_681 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841160|gb|EAQ58408.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017967|gb|ADT66060.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 129
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNAEIGG-----APKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|321442452|gb|ADW85765.1| hypothetical protein [Campylobacter jejuni]
Length = 129
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNANVGG-----APKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|161619230|ref|YP_001593117.1| Side tail fiber protein [Brucella canis ATCC 23365]
gi|161336041|gb|ABX62346.1| Side tail fiber protein [Brucella canis ATCC 23365]
Length = 410
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 304 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 356
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 357 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 404
>gi|323652326|gb|ADX98407.1| conserved hypothetical protein [Campylobacter jejuni]
Length = 129
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNAEIGG-----APKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|261314010|ref|ZP_05953207.1| peptidase M15A [Brucella pinnipedialis M163/99/10]
gi|261303036|gb|EEY06533.1| peptidase M15A [Brucella pinnipedialis M163/99/10]
Length = 434
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 328 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 380
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 381 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 428
>gi|260566203|ref|ZP_05836673.1| peptidase M15A [Brucella suis bv. 4 str. 40]
gi|261219052|ref|ZP_05933333.1| peptidase M15A [Brucella ceti M13/05/1]
gi|261317903|ref|ZP_05957100.1| peptidase M15A [Brucella pinnipedialis B2/94]
gi|261322112|ref|ZP_05961309.1| peptidase M15A [Brucella ceti M644/93/1]
gi|261752579|ref|ZP_05996288.1| peptidase M15A [Brucella suis bv. 5 str. 513]
gi|261755238|ref|ZP_05998947.1| peptidase M15A [Brucella suis bv. 3 str. 686]
gi|261758461|ref|ZP_06002170.1| peptidase M15A [Brucella sp. F5/99]
gi|265988932|ref|ZP_06101489.1| peptidase M15A [Brucella pinnipedialis M292/94/1]
gi|260155721|gb|EEW90801.1| peptidase M15A [Brucella suis bv. 4 str. 40]
gi|260924141|gb|EEX90709.1| peptidase M15A [Brucella ceti M13/05/1]
gi|261294802|gb|EEX98298.1| peptidase M15A [Brucella ceti M644/93/1]
gi|261297126|gb|EEY00623.1| peptidase M15A [Brucella pinnipedialis B2/94]
gi|261738445|gb|EEY26441.1| peptidase M15A [Brucella sp. F5/99]
gi|261742332|gb|EEY30258.1| peptidase M15A [Brucella suis bv. 5 str. 513]
gi|261744991|gb|EEY32917.1| peptidase M15A [Brucella suis bv. 3 str. 686]
gi|264661129|gb|EEZ31390.1| peptidase M15A [Brucella pinnipedialis M292/94/1]
Length = 430
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 324 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 376
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 377 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 424
>gi|261325355|ref|ZP_05964552.1| peptidase M15A [Brucella neotomae 5K33]
gi|261301335|gb|EEY04832.1| peptidase M15A [Brucella neotomae 5K33]
Length = 428
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 322 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 374
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 375 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 422
>gi|306839101|ref|ZP_07471918.1| Side tail fiber protein [Brucella sp. NF 2653]
gi|306405648|gb|EFM61910.1| Side tail fiber protein [Brucella sp. NF 2653]
Length = 410
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 304 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 356
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 357 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 404
>gi|321442390|gb|ADW85704.1| conserved hypothetical protein [Campylobacter jejuni]
Length = 129
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNAEVGG-----APKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|265984327|ref|ZP_06097062.1| peptidase M15A [Brucella sp. 83/13]
gi|264662919|gb|EEZ33180.1| peptidase M15A [Brucella sp. 83/13]
Length = 430
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 324 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 376
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 377 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 424
>gi|256061354|ref|ZP_05451498.1| Side tail fiber protein [Brucella neotomae 5K33]
Length = 388
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 282 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 334
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 335 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 382
>gi|23502153|ref|NP_698280.1| hypothetical protein BR1277 [Brucella suis 1330]
gi|23348117|gb|AAN30195.1| conserved hypothetical protein [Brucella suis 1330]
Length = 426
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 320 RQTVDVAYLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 372
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 373 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 420
>gi|254719326|ref|ZP_05181137.1| Side tail fiber protein [Brucella sp. 83/13]
Length = 390
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 284 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 336
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 337 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 384
>gi|189024419|ref|YP_001935187.1| hypothetical protein BAbS19_I12100 [Brucella abortus S19]
gi|189019991|gb|ACD72713.1| hypothetical protein BAbS19_I12100 [Brucella abortus S19]
Length = 410
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 304 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 356
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 357 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 404
>gi|254693976|ref|ZP_05155804.1| hypothetical protein Babob3T_04799 [Brucella abortus bv. 3 str.
Tulya]
Length = 388
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 282 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 334
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 335 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 382
>gi|62290183|ref|YP_221976.1| hypothetical protein BruAb1_1278 [Brucella abortus bv. 1 str.
9-941]
gi|82700105|ref|YP_414679.1| hypothetical protein BAB1_1296 [Brucella melitensis biovar Abortus
2308]
gi|297248575|ref|ZP_06932293.1| hypothetical protein BAYG_01534 [Brucella abortus bv. 5 str. B3196]
gi|62196315|gb|AAX74615.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616206|emb|CAJ11252.1| unnamed protein product [Brucella melitensis biovar Abortus 2308]
gi|297175744|gb|EFH35091.1| hypothetical protein BAYG_01534 [Brucella abortus bv. 5 str. B3196]
Length = 426
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 320 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 372
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 373 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 420
>gi|260546728|ref|ZP_05822467.1| peptidase M15A [Brucella abortus NCTC 8038]
gi|260755011|ref|ZP_05867359.1| peptidase M15A [Brucella abortus bv. 6 str. 870]
gi|260758227|ref|ZP_05870575.1| peptidase M15A [Brucella abortus bv. 4 str. 292]
gi|260762054|ref|ZP_05874397.1| peptidase M15A [Brucella abortus bv. 2 str. 86/8/59]
gi|260884022|ref|ZP_05895636.1| peptidase M15A [Brucella abortus bv. 9 str. C68]
gi|260095778|gb|EEW79655.1| peptidase M15A [Brucella abortus NCTC 8038]
gi|260668545|gb|EEX55485.1| peptidase M15A [Brucella abortus bv. 4 str. 292]
gi|260672486|gb|EEX59307.1| peptidase M15A [Brucella abortus bv. 2 str. 86/8/59]
gi|260675119|gb|EEX61940.1| peptidase M15A [Brucella abortus bv. 6 str. 870]
gi|260873550|gb|EEX80619.1| peptidase M15A [Brucella abortus bv. 9 str. C68]
Length = 430
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 324 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 376
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 377 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 424
>gi|256369698|ref|YP_003107208.1| putative peptidase M15A [Brucella microti CCM 4915]
gi|255999860|gb|ACU48259.1| putative peptidase M15A [Brucella microti CCM 4915]
Length = 434
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 328 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 380
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 381 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 428
>gi|261214267|ref|ZP_05928548.1| peptidase M15A [Brucella abortus bv. 3 str. Tulya]
gi|260915874|gb|EEX82735.1| peptidase M15A [Brucella abortus bv. 3 str. Tulya]
Length = 428
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 322 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 374
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 375 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 422
>gi|237815693|ref|ZP_04594690.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689489|ref|ZP_05152743.1| hypothetical protein Babob68_04799 [Brucella abortus bv. 6 str.
870]
gi|254697626|ref|ZP_05159454.1| hypothetical protein Babob28_07933 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730517|ref|ZP_05189095.1| hypothetical protein Babob42_04809 [Brucella abortus bv. 4 str.
292]
gi|256257737|ref|ZP_05463273.1| hypothetical protein Babob9C_10391 [Brucella abortus bv. 9 str.
C68]
gi|237788991|gb|EEP63202.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 390
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 284 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 336
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 337 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 384
>gi|254706550|ref|ZP_05168378.1| Side tail fiber protein [Brucella pinnipedialis M163/99/10]
Length = 394
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 288 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 340
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 341 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 388
>gi|225627746|ref|ZP_03785783.1| Side tail fiber protein [Brucella ceti str. Cudo]
gi|254702013|ref|ZP_05163841.1| Side tail fiber protein [Brucella suis bv. 5 str. 513]
gi|254704554|ref|ZP_05166382.1| Side tail fiber protein [Brucella suis bv. 3 str. 686]
gi|254710340|ref|ZP_05172151.1| Side tail fiber protein [Brucella pinnipedialis B2/94]
gi|254714336|ref|ZP_05176147.1| Side tail fiber protein [Brucella ceti M644/93/1]
gi|254717235|ref|ZP_05179046.1| Side tail fiber protein [Brucella ceti M13/05/1]
gi|256031834|ref|ZP_05445448.1| Side tail fiber protein [Brucella pinnipedialis M292/94/1]
gi|260168968|ref|ZP_05755779.1| Side tail fiber protein [Brucella sp. F5/99]
gi|225617751|gb|EEH14796.1| Side tail fiber protein [Brucella ceti str. Cudo]
Length = 390
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 284 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 336
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 337 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDW 384
>gi|86149124|ref|ZP_01067356.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85840482|gb|EAQ57739.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 129
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDTLCEIREHYNAP--IIINSGYRCKEHNAEVGG-----APKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV + +++ I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTKDVHQYILQRYDDKPFGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|57237252|ref|YP_178264.1| hypothetical protein CJE0241 [Campylobacter jejuni RM1221]
gi|57166056|gb|AAW34835.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
gi|315058119|gb|ADT72448.1| hypothetical protein CJS3_0707 [Campylobacter jejuni subsp. jejuni
S3]
Length = 129
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P + I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--VIINSGYRCKEHNAEVGG-----APKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLITYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|150388367|ref|YP_001318416.1| peptidase M15A [Alkaliphilus metalliredigens QYMF]
gi|149948229|gb|ABR46757.1| Peptidase M15A [Alkaliphilus metalliredigens QYMF]
Length = 118
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ +D Q+ L E+++ P + I SGYRT N+ + R SQH+LGKA D
Sbjct: 24 VRLDSQVLKKLQELREQTGRP--VLINSGYRTPSYNQQVGGSPR-----SQHLLGKAADI 76
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
+PG+ L SL ++A + GG+G Y F+H+DV
Sbjct: 77 MVPGMELESLARVAEGIGFGGIGIYRTFIHVDV 109
>gi|237757091|ref|ZP_04585531.1| twin-arginine translocation pathway signal [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690745|gb|EEP59913.1| twin-arginine translocation pathway signal [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 49
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GKA+D I GV L L +AI LK GGVGYY S F+HID GR+R W
Sbjct: 3 GKAIDINISGVPLHILRDVAISLKAGGVGYYPSSNFVHIDTGRIRYW 49
>gi|163843542|ref|YP_001627946.1| peptidase M15A [Brucella suis ATCC 23445]
gi|163674265|gb|ABY38376.1| Peptidase M15A [Brucella suis ATCC 23445]
Length = 127
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 21 RQTVDVACLKPELVTVLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 73
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
A D I GVS + + A + +RGGVG Y + +H+DVG R W
Sbjct: 74 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERDWN 122
>gi|294792296|ref|ZP_06757444.1| peptidase M15A [Veillonella sp. 6_1_27]
gi|294457526|gb|EFG25888.1| peptidase M15A [Veillonella sp. 6_1_27]
Length = 128
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L D L I++ VP I + SGYR E N+ + SQHVLG A D
Sbjct: 33 IDKRLVDVLDRIRERLGVP--ITVNSGYRCPEHNEEVGG-----VSDSQHVLGTAADITY 85
Query: 163 PGVSLRSLYKIAIRLKRGGVG--YYSKFLHIDV 193
G+ + L +IA G+G YY F+HIDV
Sbjct: 86 DGIDVDYLAEIAEECGADGIGKYYYQDFVHIDV 118
>gi|158320343|ref|YP_001512850.1| peptidase M15A [Alkaliphilus oremlandii OhILAs]
gi|158140542|gb|ABW18854.1| Peptidase M15A [Alkaliphilus oremlandii OhILAs]
Length = 120
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
H + +D +L + L ++ + P I + SGYRT E NK + + S H+ G
Sbjct: 19 HGDSVVKLDSRLLEKLQLLRDKLNNP--INVTSGYRTPECNKRVGG-----SSNSYHMKG 71
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
A D Y PG + + K A + G+G YS F+H+DV
Sbjct: 72 MAADIYSPGYTPAQIAKAAEEVGFTGIGIYSTFVHVDV 109
>gi|315928524|gb|EFV07826.1| peptidase M15 family protein [Campylobacter jejuni subsp. jejuni
305]
Length = 129
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNANVGG-----APKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ +H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGLVHLDTRGKKARWT 127
>gi|90419539|ref|ZP_01227449.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336476|gb|EAS50217.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 356
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
G+++L N L+ S ++ L L +++ + + + SGYR+ NK ++
Sbjct: 235 GMARLAPNGLMVQRESVETSCFPSDLVRILRTVERRYGT--KVIVTSGYRSPTHNKRVNG 292
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRS 198
AR+SQH+ KA D IPG ++ L RGGVG Y +K +H+DVG R
Sbjct: 293 -----ARRSQHMGCKAADIIIPGADNMAVAAYVRSLPGRGGVGTYCHTKAIHVDVGHKRD 347
Query: 199 W 199
W
Sbjct: 348 W 348
>gi|158320165|ref|YP_001512672.1| peptidase M15A [Alkaliphilus oremlandii OhILAs]
gi|158140364|gb|ABW18676.1| Peptidase M15A [Alkaliphilus oremlandii OhILAs]
Length = 120
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
H + +D +L + L ++ + P I I SGYRT E NK + + S H+ G
Sbjct: 19 HGGSVVKLDSKLLEKLQLLRVKLNNP--INITSGYRTLECNKRVGG-----SSNSYHMKG 71
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
A D Y PG + + K A + G+G YS F+H+DV
Sbjct: 72 MAADIYSPGYTPTQIAKAAEEVGFTGIGTYSNFVHVDV 109
>gi|315929427|gb|EFV08626.1| peptidase M15 family protein [Campylobacter jejuni subsp. jejuni
305]
Length = 129
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI+++++ P I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHYNAP--IIINSGYRCKEHNAEVGG-----APKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + I +K Y+ +H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGLVHLDTRGKKARWT 127
>gi|294852613|ref|ZP_06793286.1| hypothetical protein BAZG_01542 [Brucella sp. NVSL 07-0026]
gi|294821202|gb|EFG38201.1| hypothetical protein BAZG_01542 [Brucella sp. NVSL 07-0026]
Length = 434
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 98 KQSID---MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+Q++D + P+L L ++++F P + + SGYR+ N+ ++ AR+S H++
Sbjct: 328 RQTVDVACLKPELVTMLKTMERHFRRP--VMVTSGYRSPSYNRKVNG-----ARRSLHMI 380
Query: 155 GKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
A D I GVS + + A + +RGGVG Y + +H+DV R W
Sbjct: 381 CAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVAPERDW 428
>gi|253734721|ref|ZP_04868886.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|253727304|gb|EES96033.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH130]
Length = 49
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 3 GQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 49
>gi|283954032|ref|ZP_06371557.1| hypothetical protein C414_000080020 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794311|gb|EFC33055.1| hypothetical protein C414_000080020 [Campylobacter jejuni subsp.
jejuni 414]
Length = 129
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L D L EI+++++ P I I SGYR N + A KSQH LG A DF + GV
Sbjct: 29 ELIDILCEIREHYNAP--IIINSGYRCASHNAEIGG-----AAKSQHTLGSAADFVVKGV 81
Query: 166 SLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
+++ + I +K Y+ F+H+D G+ WT
Sbjct: 82 KTEDVHQYVLQRYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|110634276|ref|YP_674484.1| peptidase M15A [Mesorhizobium sp. BNC1]
gi|110285260|gb|ABG63319.1| Peptidase M15A [Chelativorans sp. BNC1]
Length = 459
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 18/125 (14%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMD---PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
GL++L N LL ++S+D+ P+L L I++ F + + + SGYR+ N
Sbjct: 338 GLARLAPNGLL---KQRESVDVSCFKPKLVHVLKTIERRFG--KRVVVTSGYRSPAYN-- 390
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGR 195
RR R R SQH+ A D + GVS L + A L RGGVG Y + +H+DVG
Sbjct: 391 --RRVRGAPR-SQHMNCAAADIVVEGVSKWELAQFARSLPGRGGVGTYCHTNAVHVDVGP 447
Query: 196 VRSWT 200
R W
Sbjct: 448 ERDWN 452
>gi|222838323|gb|EEE76688.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMD---PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
GL++L N LL ++S+D+ P+L L I++ F + + + SGYR+ N+
Sbjct: 397 GLARLAPNGLL---KQRESVDVSCFKPKLVHVLKTIERRFG--KRVVVTSGYRSPAYNRR 451
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGR 195
+ + A +SQH+ A D + GVS L + A L RGGVG Y + +H+DVG
Sbjct: 452 V-----RGAPRSQHMNCAAADIVVEGVSKWELAQFARSLPGRGGVGTYCHTNAVHVDVGP 506
Query: 196 VRSWT 200
R W
Sbjct: 507 ERDWN 511
>gi|313114003|ref|ZP_07799558.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623705|gb|EFQ07105.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 140
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 19/117 (16%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ +I +D +L L I+++F ++I SGYRT N L ++ SQH+ G+
Sbjct: 29 ASDTILIDDELVVLLQCIREHFGA--KVHITSGYRTAAYNATLP----GASKNSQHIQGR 82
Query: 157 AVDFYIPGVSLRSLYKIAIRL--KRGGVGYYSK----------FLHIDVGRVRS-WT 200
A DF++ GV + ++ A +L RGG+G Y K ++H+D +S WT
Sbjct: 83 AADFWVEGVPVATVAAYAEKLLPGRGGIGRYPKDAAHPTRKTGWVHVDTRPNKSRWT 139
>gi|295100636|emb|CBK98181.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 132
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 19/92 (20%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
I+++F P ++I SGYRT N + ++ SQH+LG+A DFY+ GV + ++
Sbjct: 39 IREHFGKP--VHITSGYRTAAHNAAVG-----GSKSSQHLLGRAADFYVEGVDVATVAAY 91
Query: 174 AIRL--KRGGVGYYSK----------FLHIDV 193
A L RGG+G Y K ++HID
Sbjct: 92 AETLLPSRGGIGRYPKDAAHPKRRTGWVHIDT 123
>gi|78355986|ref|YP_387435.1| hypothetical protein Dde_0939 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218391|gb|ABB37740.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 124
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ + P + I SG+R NK + A +S H LG A
Sbjct: 23 HSAAVHPDLVDALQALRDHIGKP--LSITSGFRCNRHNKAVGG-----AEQSFHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRL---KRGGVGYYSKFLHIDV---GRVR 197
D P GVS L IA + + GG+G Y+ ++H+DV G+ R
Sbjct: 76 DVSCPAGVSPEELAVIAEEIPLFREGGIGVYASWVHLDVRQSGKAR 121
>gi|300088726|ref|YP_003759248.1| peptidase M15A [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299528459|gb|ADJ26927.1| Peptidase M15A [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 124
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ P + I SG+R NK + A KS H LG A
Sbjct: 23 HSAAVHPDLVDALQTLRDRIGKP--LSITSGFRCNRHNKAVGG-----AEKSFHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRL---KRGGVGYYSKFLHIDV 193
D P GVS +L IA + + GG+G Y+ ++H+DV
Sbjct: 76 DVSCPAGVSPDALAVIAEEIPLFREGGIGVYASWVHLDV 114
>gi|304393752|ref|ZP_07375680.1| peptidase M15A [Ahrensia sp. R2A130]
gi|303294759|gb|EFL89131.1| peptidase M15A [Ahrensia sp. R2A130]
Length = 319
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 96 HSKQSIDMD--PQ-LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
H ++ I D P+ L L +++++ P + I SG+R+Q N+ + + AR S H
Sbjct: 206 HQRKGIRSDCFPRALVAILKRVERHYGKP--VVITSGFRSQSYNRRI-----RGARNSTH 258
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSW 199
A D + GVS L K + RGGVG Y +K +HID+G R+W
Sbjct: 259 TKCLAADIQVEGVSKWQLAKYMRSIPGRGGVGTYCWTKSVHIDIGAKRAW 308
>gi|86357506|ref|YP_469398.1| hypothetical protein RHE_CH01883 [Rhizobium etli CFN 42]
gi|86281608|gb|ABC90671.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 351
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + ++ +F P + + SGYR +E N+++ A +S H +A D I G
Sbjct: 244 PDLLKVIKTVESHFGRP--VIVTSGYRDEEHNRLVGG-----ADESMHKSCEAADIQIDG 296
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
VS +RSL RGGVG Y + +H+D G+ R W
Sbjct: 297 VSKWDIAAYIRSLPA------RGGVGTYCHTDSVHLDTGKTRDW 334
>gi|162455229|ref|YP_001617596.1| hypothetical protein sce6947 [Sorangium cellulosum 'So ce 56']
gi|161165811|emb|CAN97116.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 400
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQET---NKMLSRRNRKIARKSQHVLGKAVDFY 161
P+L L +I F I+I SGYR + + +RR SQH G+A+D
Sbjct: 257 PRLLWLLQQIADAFPR-RGIHIFSGYRPRAPTTRDAPAARRPTSGTHHSQHAEGRAMDIL 315
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGR 195
+ GV +L++ L G G+Y SKF+H+DV R
Sbjct: 316 VMGVPNTALFQFCRTLDDVGCGFYPNSKFVHVDVRR 351
>gi|13471064|ref|NP_102633.1| hypothetical protein mlr0938 [Mesorhizobium loti MAFF303099]
gi|14021808|dbj|BAB48419.1| mlr0938 [Mesorhizobium loti MAFF303099]
Length = 432
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 77 GSQYNQEGLSQLNRLLYDWHSKQSIDMD-----PQLFDFLWEIQQYFSVPEYIYILSGYR 131
G Y + + RL + KQ+ +D P L L I+ ++ + + SGYR
Sbjct: 296 GGSYQVASAAGMARLAPNGLLKQNESVDVACLKPSLVRVLKTIEGHYG--RKMVVTSGYR 353
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK-IAIRLKRGGVGYY--SKF 188
N R A+ S H+ A D +PGVS L I RGGVG Y ++
Sbjct: 354 DPARN-----RRANGAKNSLHMYCAAADIQVPGVSKWELANYIRTMPGRGGVGTYCHTES 408
Query: 189 LHIDVGRVRSW 199
+H+DVG R W
Sbjct: 409 VHVDVGPERDW 419
>gi|261347081|ref|ZP_05974725.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
gi|282564820|gb|EFB70355.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
Length = 108
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+D +L L +++ +F+ P +Y++SG R + NK + A SQH+LG A D
Sbjct: 11 DVDAELVGVLEDVRAHFNKP--VYVVSGRRCAKHNKAVGG-----AEHSQHLLGTAGDIK 63
Query: 162 IPGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDV 193
+ V+ +++ Y + + GVG Y F HIDV
Sbjct: 64 VKDVTPKAIADYLESKYPSKYGVGRYKTFTHIDV 97
>gi|260459834|ref|ZP_05808088.1| Peptidase M15A [Mesorhizobium opportunistum WSM2075]
gi|259034636|gb|EEW35893.1| Peptidase M15A [Mesorhizobium opportunistum WSM2075]
Length = 413
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 77 GSQYNQEGLSQLNRLLYDWHSKQSIDMD-----PQLFDFLWEIQQYFSVPEYIYILSGYR 131
G Y + + RL + KQ+ +D P L L I+ ++ + + SGYR
Sbjct: 277 GGSYQVASAAGMARLAPNGLLKQNESVDVACLKPSLVRVLKTIEGHYG--RKMMVTSGYR 334
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK-IAIRLKRGGVGYY--SKF 188
N R A+ S H+ A D +PGVS L I RGGVG Y ++
Sbjct: 335 DPARN-----RRANGAKNSLHMYCAAADIQVPGVSKWELASYIRTMPGRGGVGTYCHTES 389
Query: 189 LHIDVGRVRSW 199
+H+DVG R W
Sbjct: 390 VHVDVGPERDW 400
>gi|322649621|gb|EFY46052.1| hypothetical protein SEEM675_16034 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 44
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 1 MDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 44
>gi|295104835|emb|CBL02379.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii SL3/3]
Length = 215
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 22/142 (15%)
Query: 70 AIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID---MDPQLFDFLWEIQQYFSVPEYIYI 126
+++T+ +N++ LS+ N Y++ D + +L + L +I+ +F P + I
Sbjct: 2 SVITYSMKKDWNKK-LSK-NFCAYEFACNDRSDEFKVATELVETLQQIRDHFGKP--VLI 57
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS-LR-SLYKIAIRL--KRGGV 182
S YRT N + +R SQH LG A D +I GV +R +LY ++ K GG+
Sbjct: 58 SSAYRTPAYNISIGGSSR-----SQHCLGTAADIHINGVDPIRIALYVASLPYFQKHGGI 112
Query: 183 GYYSK------FLHIDVGRVRS 198
GYYS+ F+HIDV S
Sbjct: 113 GYYSRAQVTGGFVHIDVRETHS 134
>gi|322420443|ref|YP_004199666.1| peptidase M15A [Geobacter sp. M18]
gi|320126830|gb|ADW14390.1| Peptidase M15A [Geobacter sp. M18]
Length = 124
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ P + I SG+R NK + A +S H LG A
Sbjct: 23 HSAAVHPDLVDALQTLRDRIGKP--LSITSGFRCNRHNKAVGG-----AEQSFHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRL---KRGGVGYYSKFLHIDV 193
D P GVS +L IA + + GG+G Y+ ++H+DV
Sbjct: 76 DVSCPAGVSPEALAVIAEEIPLFREGGIGVYASWVHLDV 114
>gi|218463395|ref|ZP_03503486.1| hypothetical protein RetlK5_29950 [Rhizobium etli Kim 5]
Length = 340
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 22/105 (20%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + ++ +F P + + SGYR +E N+++ A +S H +A D I G
Sbjct: 233 PDLLKVIKMVENHFGRP--VIVTSGYRDEEHNRLVGG-----ADESMHKSCEAADIRIDG 285
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
VS +RSL RGGVG Y ++ +H+D G+ R W
Sbjct: 286 VSKWDVAAYIRSLPD------RGGVGTYCHTESVHLDTGKSRDWN 324
>gi|37678811|ref|NP_933420.1| hypothetical protein VV0627 [Vibrio vulnificus YJ016]
gi|37197552|dbj|BAC93391.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 227
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI------RL 177
I I S YRT E N+ + A S HV GKA D + GV + LY+ I ++
Sbjct: 148 IKITSAYRTPEYNRKIGG-----ATNSLHVTGKAADLQVSGVKPKDLYEKIISLINNGKI 202
Query: 178 KRGGVGYYSKFLHIDV 193
+GGVG Y+ F+H D+
Sbjct: 203 TQGGVGLYTSFVHYDI 218
>gi|212709260|ref|ZP_03317388.1| hypothetical protein PROVALCAL_00295 [Providencia alcalifaciens DSM
30120]
gi|212688172|gb|EEB47700.1| hypothetical protein PROVALCAL_00295 [Providencia alcalifaciens DSM
30120]
Length = 120
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+D +L L +++++F+ P +Y++SG R + N + A+ SQH+LG A D
Sbjct: 23 DVDTELVTVLEDVREHFNQP--VYVVSGRRCTKHNNAVGG-----AKHSQHLLGTAGDIK 75
Query: 162 IPGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDV 193
+ V+ + + Y + + G+G Y F HIDV
Sbjct: 76 VKNVAPKGVADYLESKYPNQYGIGRYKTFTHIDV 109
>gi|302343223|ref|YP_003807752.1| peptidase M15A [Desulfarculus baarsii DSM 2075]
gi|301639836|gb|ADK85158.1| Peptidase M15A [Desulfarculus baarsii DSM 2075]
Length = 124
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ P + I SG+R NK + A +S H LG A
Sbjct: 23 HSAAVHPDLVDALQALRDRIGKP--LSITSGFRCNRHNKAVGG-----AEQSFHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRL---KRGGVGYYSKFLHIDVGR 195
D P GVS L IA + + GG+G Y+ ++H+DV R
Sbjct: 76 DVSCPAGVSPEQLAVIAEEIPLFREGGIGVYASWVHLDVRR 116
>gi|319783905|ref|YP_004143381.1| peptidase M15A [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169793|gb|ADV13331.1| Peptidase M15A [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 416
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 77 GSQYNQEGLSQLNRLLYDWHSKQSIDMD-----PQLFDFLWEIQQYFSVPEYIYILSGYR 131
G Y + + RL + KQ+ +D P L L I+ ++ + + SGYR
Sbjct: 281 GGSYQVASAAGMARLAPNGLLKQNESVDVACLKPSLVRVLKTIEGHYG--RKMTVTSGYR 338
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK-IAIRLKRGGVGYY--SKF 188
N+ R N A+ S H+ A D +PGVS L I RGGVG Y ++
Sbjct: 339 DPARNR---RANG--AKNSLHMYCAAADIQVPGVSKWELASYIRSMPGRGGVGTYCHTES 393
Query: 189 LHIDVGRVRSW 199
+H+DVG R W
Sbjct: 394 VHVDVGPERDW 404
>gi|218660636|ref|ZP_03516566.1| hypothetical protein RetlI_14104 [Rhizobium etli IE4771]
Length = 291
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 22/105 (20%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + ++ +F P + + SGYR +E N+++ A +S H +A D I G
Sbjct: 184 PDLLKVIKMVENHFGRP--VIVTSGYRDEEHNRLVGG-----ADESMHKSCEAADIRIDG 236
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
VS +RSL RGGVG Y ++ +H+D G+ R W
Sbjct: 237 VSKWDVAAYIRSLPD------RGGVGTYCHTESVHLDTGKSRDWN 275
>gi|310828611|ref|YP_003960968.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308740345|gb|ADO38005.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 185
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA--RKSQHVLGKAVD 159
+MDP+L + + ++ F P I I SG R + RRN ++ S H+ G A D
Sbjct: 98 EMDPELLEKIEALRCAFDRP--IIITSGVRCE-------RRNAEVGGIENSWHLSGHAAD 148
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGY-YSKFLHIDVGR 195
Y PGV + +A L G + Y Y +F H+++ R
Sbjct: 149 LYCPGVPCDEVAAVARTLGLGVIEYPYQQFDHVEIWR 185
>gi|313112917|ref|ZP_07798563.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624822|gb|EFQ08131.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 131
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L L I+ +F P + I SGYRT N+ + A SQH G+A D +
Sbjct: 35 VDSELVQVLQAIRDHFGAP--VVITSGYRTAAHNRAVGG-----AVYSQHQYGRAADIRV 87
Query: 163 PGVSLRSLYKIAIRL--KRGGVGYYSK--FLHIDVGRVRS 198
GV + L A L GG+G Y F+H+DV + +S
Sbjct: 88 SGVPVEQLAAYAETLLPGTGGIGRYPAKGFVHVDVRKAKS 127
>gi|261347053|ref|ZP_05974697.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
gi|282564843|gb|EFB70378.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
Length = 120
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+D +L L +++ +F+ P +Y++SG R + NK + A SQH+LG A D
Sbjct: 23 DVDVELVGVLEDVRAHFNKP--VYVVSGRRCAKHNKAVGG-----AEHSQHLLGTAGDIK 75
Query: 162 IPGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDV 193
+ V+ +++ Y + + GVG Y F HIDV
Sbjct: 76 VKDVTPKAVADYLESKYPSKYGVGRYKTFTHIDV 109
>gi|108862028|ref|YP_654144.1| 43 [Enterobacteria phage K1-5]
gi|40787114|gb|AAR90085.1| 43 [Enterobacteria phage K1-5]
Length = 114
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L + +++++F P + I SG+R + N N A+ S H+ GKA D +
Sbjct: 22 VDAELLQVVTDVREHFGSP--VVITSGHRCAKHNA-----NVGGAKNSMHLTGKAADIKV 74
Query: 163 PGVSLRSLYKIAIRLKRG--GVGYYSKFLHIDV 193
G+ ++K +G G+G Y+ F HIDV
Sbjct: 75 SGILPSEVHKYLTSKYQGKYGIGKYNSFTHIDV 107
>gi|310829280|ref|YP_003961637.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308741014|gb|ADO38674.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 184
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA--RKSQHVLGKAVD 159
DMDP+L + + ++ YF+ P I I SG R + RRN ++ S H+ G A D
Sbjct: 97 DMDPELLEKIEALRCYFNRP--IIITSGVRCE-------RRNAEVGGIENSWHLSGHAAD 147
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDV 193
Y PGV + +A L G + Y +F H ++
Sbjct: 148 LYCPGVPCDEVAWVARELGLGVIEYPDQQFDHCEI 182
>gi|241204471|ref|YP_002975567.1| peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858361|gb|ACS56028.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 356
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + ++ +F P + + SGYR +E N++ A +S H +A D I G
Sbjct: 249 PDLLKVIKTVESHFGRP--VIVTSGYRDEEHNRLAGG-----ADESMHKSCEAADIQIDG 301
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
V+ +RSL RGGVG Y + +H+D G+ R W
Sbjct: 302 VTKWDIAAYIRSLPD------RGGVGTYCHTDSVHLDTGKTRDW 339
>gi|78356925|ref|YP_388374.1| hypothetical protein Dde_1882 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219330|gb|ABB38679.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 124
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ P + I SG+R NK + A +S H LG A
Sbjct: 23 HSAAVHPDLVDALQALRDRVGKP--LSITSGFRCNRHNKAVGG-----AEQSFHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRL---KRGGVGYYSKFLHIDV 193
D P GVS L +A + + GG+G Y+ ++H+DV
Sbjct: 76 DVSCPAGVSPEELAVVAEEIPLFREGGIGVYASWVHLDV 114
>gi|317153341|ref|YP_004121389.1| peptidase M15A [Desulfovibrio aespoeensis Aspo-2]
gi|316943592|gb|ADU62643.1| Peptidase M15A [Desulfovibrio aespoeensis Aspo-2]
Length = 124
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ P + I SG+R NK + A +S H LG A
Sbjct: 23 HSAAVHPDLVDALQALRDRIGKP--LSITSGFRCNRHNKAVGG-----AAQSYHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRL---KRGGVGYYSKFLHIDV 193
D P GVS L IA + + GG+G Y+ ++H+DV
Sbjct: 76 DVSCPDGVSPGDLAVIAEEIPLFREGGIGVYASWVHLDV 114
>gi|116751240|ref|YP_847927.1| peptidase M15A [Syntrophobacter fumaroxidans MPOB]
gi|116700304|gb|ABK19492.1| Peptidase M15A [Syntrophobacter fumaroxidans MPOB]
Length = 124
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
S + P L D L ++ P + I SG+R NK + A +S H LG A
Sbjct: 23 HSAAVHPDLVDALQTLRDRIGKP--LSITSGFRCNRHNKAVGG-----AEQSFHTLGMAA 75
Query: 159 DFYIP-GVSLRSLYKIAIRLK---RGGVGYYSKFLHIDV---GRVR 197
D P GVS L IA + GG+G Y+ ++H+DV G+ R
Sbjct: 76 DVSCPAGVSPEELAVIAEEIPLFHEGGIGVYASWVHLDVRQSGKAR 121
>gi|237750681|ref|ZP_04581161.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229373771|gb|EEO24162.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 146
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L D L EI+++F+ P I I SGYR NK + A KS+H+ G AVDF + G+
Sbjct: 29 ELIDTLVEIREHFNAP--ITINSGYRCPTHNKKIGG-----ASKSRHIAGDAVDFVVKGI 81
Query: 166 SLRSLYKIAIR 176
+ +++ ++
Sbjct: 82 PTKKVFEHVLK 92
>gi|160942728|ref|ZP_02089970.1| hypothetical protein FAEPRAM212_00204 [Faecalibacterium prausnitzii
M21/2]
gi|158446002|gb|EDP23005.1| hypothetical protein FAEPRAM212_00204 [Faecalibacterium prausnitzii
M21/2]
Length = 137
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D L + L I+++F P + I S YRT N A+ SQH+ G+A D +
Sbjct: 36 IDTALAELLERIREHFGKP--VTITSAYRTPAHNAKAGG-----AKFSQHLYGRAADIRV 88
Query: 163 PGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
GVS+ ++ Y ++ RGGVG Y + GR W
Sbjct: 89 QGVSVEAVAAYAESLMPDRGGVGRYP----VKAGRAAGW 123
>gi|116251860|ref|YP_767698.1| hypothetical protein RL2100 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256508|emb|CAK07592.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 355
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + ++ +F P + + SGYR +E N+++ A +S H +A D I G
Sbjct: 248 PDLLKVIKIVESHFGRP--VIVTSGYRDEEHNRLVGG-----ADESMHKSCEAADIQIDG 300
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
V+ +RSL RGGVG Y + +H+D G+ R W
Sbjct: 301 VTKWDIAAYIRSLPD------RGGVGTYCHTDSVHLDTGKTRDW 338
>gi|227821968|ref|YP_002825939.1| hypothetical protein NGR_c14110 [Sinorhizobium fredii NGR234]
gi|227340968|gb|ACP25186.1| hypothetical protein NGR_c14110 [Sinorhizobium fredii NGR234]
Length = 461
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 28/131 (21%)
Query: 80 YNQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNK 137
N GL++L + L+ S ++ P L + L +++++ + + + SG R + N+
Sbjct: 339 ANLSGLARLAPSGLILQTESVETGCFKPALMEMLKNVERHYG--QKVMVTSGLRPIKVNR 396
Query: 138 MLSRRNRKIARKSQHVLGKAVDFYIPGVS-------LRSLYKIAIRLKRGGVGYY--SKF 188
R+S H +A D + GVS LRSL RGGVG Y ++
Sbjct: 397 K---------RQSLHTRCEAADIQVKGVSKWDLADYLRSLPG------RGGVGTYCHTES 441
Query: 189 LHIDVGRVRSW 199
+HID+GR R W
Sbjct: 442 VHIDIGRQRDW 452
>gi|89054812|ref|YP_510263.1| glycoside hydrolase family protein [Jannaschia sp. CCS1]
gi|88864361|gb|ABD55238.1| glycoside hydrolase family 24 [Jannaschia sp. CCS1]
Length = 341
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
Q+ D L E+ + + I+ILSGYR+ N+++ S HV A+DFY+ G
Sbjct: 251 QMLDRLREV-----LDQPIHILSGYRSPAYNQLVGG-----VPNSLHVQFNAIDFYVGGA 300
Query: 166 SLRSLYKIAIRLKR------GGVGYYSKFLHIDV-GRVRSW 199
+ + + ++ R GG+G YS F+HID G+ W
Sbjct: 301 TRPAHWAAVLKDMRVAGEFRGGIGIYSSFVHIDTRGQNADW 341
>gi|162454469|ref|YP_001616836.1| hypothetical protein sce6189 [Sorangium cellulosum 'So ce 56']
gi|161165051|emb|CAN96356.1| hypothetical protein sce6189 [Sorangium cellulosum 'So ce 56']
Length = 366
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 85 LSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR 144
L +L+RL+ SI +DP+L + + +F + ++SGYR + N
Sbjct: 173 LPKLSRLMR-ASPTASIPIDPRLATLIGMVSDHFGG-RPLRVVSGYRPYSPTQYTPHSN- 229
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDV 193
H G+A+DF + GV + + GVGYY S F+H+DV
Sbjct: 230 -------HNHGRAIDFMVEGVPNTVVRDFCRGFRNAGVGYYPNSTFVHLDV 273
>gi|114767568|ref|ZP_01446317.1| Phage protein [Pelagibaca bermudensis HTCC2601]
gi|114540378|gb|EAU43466.1| Phage protein [Roseovarius sp. HTCC2601]
Length = 1164
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+MDP L ++Q SV + I S YR+ + N A+KSQH+ G+A D
Sbjct: 690 NMDPATVRALAVLEQA-SVKTF-NITSDYRSPDENDAAGG-----AKKSQHMHGRAFDID 742
Query: 162 IPGVSLRSLYKIAIRLKR-----GGVGYYSKFLHIDVGRVRSW 199
+ +S+ ++ I+L R GGVG YS LH D G R+W
Sbjct: 743 VSDMSIDERLEL-IKLARSVAGFGGVGVYSNSLHFDTGAERAW 784
>gi|114765587|ref|ZP_01444688.1| phage-related tail protein [Pelagibaca bermudensis HTCC2601]
gi|114542036|gb|EAU45069.1| phage-related tail protein [Roseovarius sp. HTCC2601]
Length = 1300
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+MDP L ++Q + + I S YR+ + N A+KSQH+ G+A D
Sbjct: 826 NMDPATVRALAVLEQ--ASGKTFKISSDYRSPDENDAAGG-----AKKSQHMQGRAFDID 878
Query: 162 IPGVSLRSLYKIAIRLKR-----GGVGYYSKFLHIDVGRVRSW 199
+ +S+ ++ I+L R GGVG YS LH D G R+W
Sbjct: 879 VSDMSIDERLEL-IKLARSVAGFGGVGVYSNSLHFDTGAERAW 920
>gi|83571771|ref|YP_425023.1| hypothetical protein PK1Ep57 [Enterobacteria phage K1E]
gi|83308222|emb|CAJ29454.1| gp43 protein [Enterobacteria phage K1E]
Length = 114
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L + +++++F P + I SG+R + N N A+ S H+ GKA D +
Sbjct: 22 VDAELLQVVTDVREHFGAP--VVITSGHRCAKHNA-----NVGGAKNSMHLTGKAADIKV 74
Query: 163 PGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDV 193
G++ + Y A + G+G Y F HIDV
Sbjct: 75 QGITPYRVWSYLTARYPNKYGIGSYPNFTHIDV 107
>gi|150396664|ref|YP_001327131.1| peptidase M15A [Sinorhizobium medicae WSM419]
gi|150028179|gb|ABR60296.1| Peptidase M15A [Sinorhizobium medicae WSM419]
Length = 433
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 80 YNQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNK 137
N GL++L N L+ ++ P+L + L ++ ++ + + SG R + N+
Sbjct: 311 ANLSGLARLTPNGLILQTEKVETGCFKPELLNILRTVEAHYG--RKVMVTSGLRAIKVNR 368
Query: 138 MLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVG 194
R+S+H +A D + GVS L ++ RGGVG Y ++ +HID+G
Sbjct: 369 K---------RQSRHTRCEAADIQVAGVSKWELADFLRKVPGRGGVGTYCHTESVHIDIG 419
Query: 195 RVRSW 199
R W
Sbjct: 420 PQRDW 424
>gi|40787062|gb|AAR90036.1| 43 [Enterobacteria phage SP6]
Length = 116
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L + ++++YF +P + I SG+R + N+ + A S H+ GKA D +
Sbjct: 22 VDAELLQVVTDVREYFGLP--VVITSGHRCSDHNRRVGG-----AASSMHMTGKAADIKV 74
Query: 163 PGVSLRSLYKIAIRLKRG-----GVGYYSKFLHIDV--GRVR 197
G + IA L+ G+G Y+ F HIDV G+ R
Sbjct: 75 KG---KDASAIASYLEHKYPDKYGIGRYNSFTHIDVRDGKAR 113
>gi|31711688|ref|NP_853606.1| gp46 [Enterobacteria phage SP6]
gi|31505692|gb|AAP48785.1| gp46 [Enterobacteria phage SP6]
Length = 118
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L + ++++YF +P + I SG+R + N+ + A S H+ GKA D +
Sbjct: 24 VDAELLQVVTDVREYFGLP--VVITSGHRCSDHNRRVGG-----AASSMHMTGKAADIKV 76
Query: 163 PGVSLRSLYKIAIRLKRG-----GVGYYSKFLHIDV--GRVR 197
G + IA L+ G+G Y+ F HIDV G+ R
Sbjct: 77 KG---KDASAIASYLEHKYPDKYGIGRYNSFTHIDVRDGKAR 115
>gi|323701158|ref|ZP_08112833.1| Peptidase M15A [Desulfotomaculum nigrificans DSM 574]
gi|323533760|gb|EGB23624.1| Peptidase M15A [Desulfotomaculum nigrificans DSM 574]
Length = 127
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ P L + L +Q P + + SGYR N+ + S H+ G A D +
Sbjct: 33 IHPYLINKLEAFRQLAGKP--VLVNSGYRCPAHNRAVGGET-----NSYHLKGMAADIQV 85
Query: 163 PGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDV 193
PGV++ L ++A + GG+G Y F+H+DV
Sbjct: 86 PGVAVAELSRLAEQAGFGGIGVYQSQGFVHVDV 118
>gi|310828751|ref|YP_003961108.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308740485|gb|ADO38145.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 200
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA--RKSQHVLGKAVDF 160
MDP+L + + ++ YF P I I SG R + RRN ++ S H+ G A D
Sbjct: 114 MDPELLEKIEALRCYFDQP--IIITSGVRCE-------RRNAEVGGIPNSWHLSGHAADL 164
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDV 193
Y PGV + + A L G + Y +F H ++
Sbjct: 165 YCPGVPYDEVARAARELGLGVIEYPDQQFDHCEI 198
>gi|310826037|ref|YP_003958394.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308737771|gb|ADO35431.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 186
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA--RKSQHVLGKAVD 159
+MDP+L + E++ F P I I SG R + RRN ++ S H+ G A D
Sbjct: 99 EMDPELLGKVEELRCVFDQP--IIITSGVRCE-------RRNAEVGGIENSWHLSGHAAD 149
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYSK-FLHIDVGR 195
Y PGV + A L G + Y + F H+++ R
Sbjct: 150 LYCPGVPCDEVAAAARALGLGVIEYPDRQFDHVEIWR 186
>gi|295105292|emb|CBL02836.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii SL3/3]
Length = 140
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L L +++ +F P + I S YRT N LS++ A+ SQH GKA D YI
Sbjct: 36 IDSELVRILQKVRDHFGSP--VIINSAYRTAAYN--LSKKVGG-AKFSQHQYGKAADIYI 90
Query: 163 PGVSLRSL--YKIAIRLKRGGVGYY--------SKFLHIDV 193
G+ + L Y + +GG+G Y F+H+DV
Sbjct: 91 QGILITKLAEYVETLMPNKGGIGIYPIKTGVRNCAFVHVDV 131
>gi|310828260|ref|YP_003960617.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308739994|gb|ADO37654.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 199
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ--HVLGKAV 158
+DM+P+L + + ++ F P + I SG R RN ++ S H G A
Sbjct: 111 VDMNPELLEKIEALRCTFDCP--VIITSGVRC-------VARNEEVGGVSWSFHKRGCAA 161
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGVGYYSK-FLHIDV 193
D Y PGV++ L A L + YYS+ +LH++V
Sbjct: 162 DLYCPGVAVGDLALAAKELGMNVLPYYSQGYLHVEV 197
>gi|169335886|ref|ZP_02863079.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
17244]
gi|169258624|gb|EDS72590.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
17244]
Length = 214
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+D K ID+D L +I+ +F + ++I SGYRT N+ + A S
Sbjct: 29 CHDGTDKIFIDIDHA--KKLEKIRVHFK--KAVHINSGYRTVSYNRKIGG-----ASGSY 79
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHID 192
H G+A D YI GV+++++ K A + G+G Y + F+HID
Sbjct: 80 HTKGRAFDIYISGVNVKTIAKYAEAIGIKGIGCYPNANFVHID 122
>gi|117925354|ref|YP_865971.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117609110|gb|ABK44565.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 132
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MDPQ + L E++ + P I + S YR N +S H G+AVD +
Sbjct: 27 MDPQFMERLEELRMAYGKP--IIVNSAYRCPNHNASVS----TTGSNGPHTTGRAVDVQV 80
Query: 163 PGVSLRSLYKIAIRLKRGGVG------YYSKFLHIDV 193
G +L +A+ G+G + S+F+H+D
Sbjct: 81 SGEDAHTLMALAMHHGFTGIGVSQRGQHKSRFIHLDT 117
>gi|159184923|ref|NP_354785.2| hypothetical protein Atu1800 [Agrobacterium tumefaciens str. C58]
gi|159140202|gb|AAK87570.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 384
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 27/104 (25%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+L + +++++++ P + SGYR + I + S+H A D I G
Sbjct: 288 PELVRMIKDVERHYNSP--AIVTSGYRPP----------KGIRQGSKHYTCDAADIQIKG 335
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
VS LRSL RGGVG Y ++ +H+D G R W
Sbjct: 336 VSKWELATYLRSL------PDRGGVGTYCHTESVHMDTGEARDW 373
>gi|325293186|ref|YP_004279050.1| hypothetical protein AGROH133_06852 [Agrobacterium sp. H13-3]
gi|325061039|gb|ADY64730.1| hypothetical protein AGROH133_06852 [Agrobacterium sp. H13-3]
Length = 418
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 27/105 (25%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+L + +++++++ P + SGYR + I + S+H A D I G
Sbjct: 322 PELVRMIKDVERHYNSP--AIVTSGYRPP----------KGIRQGSKHYTCDAADIQIKG 369
Query: 165 VS-------LRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
VS LRS+ + RGGVG Y ++ +H+D G R W
Sbjct: 370 VSKWELASYLRSMPQ------RGGVGTYCHTESVHMDTGEARDWN 408
>gi|16273553|ref|NP_439808.1| hypothetical protein HI1666 [Haemophilus influenzae Rd KW20]
gi|1176066|sp|P44284|Y1666_HAEIN RecName: Full=Uncharacterized protein HI_1666
gi|1574517|gb|AAC23311.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 127
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 50 LLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFD 109
++ + R L ++TG + F ++ L +L+ L+ D + Q MDP LF
Sbjct: 31 MVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQVHKMDPNLFQ 90
Query: 110 FLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNR 144
+ IQ + I ++ GYR+ TN M R++R
Sbjct: 91 KFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSR 126
>gi|295104107|emb|CBL01651.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii SL3/3]
Length = 137
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D L + L I+++F P + I S YRT N A+ SQH+ G+A D +
Sbjct: 36 IDTALAELLERIREHFGKP--VTITSAYRTPAHNAKAGG-----AKFSQHLYGRAADIRV 88
Query: 163 PGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
VS+ + Y ++ RGGVG Y GR W
Sbjct: 89 QDVSVEDVAAYAESLMPDRGGVGRYP----AKAGRAAGW 123
>gi|15965473|ref|NP_385826.1| lipoprotein [Sinorhizobium meliloti 1021]
gi|307302594|ref|ZP_07582350.1| Peptidase M15A [Sinorhizobium meliloti BL225C]
gi|15074654|emb|CAC46299.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306902958|gb|EFN33549.1| Peptidase M15A [Sinorhizobium meliloti BL225C]
Length = 439
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+L D L ++ ++ + + SG R + N+ R+S H +A D + G
Sbjct: 344 PELLDILKTVEGHYG--RKVMVTSGLRAIKVNRK---------RQSLHTRCEAADIQVAG 392
Query: 165 VSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSW 199
VS L + RGGVG Y + +HID+G R W
Sbjct: 393 VSKWELANFLRNVPGRGGVGTYCHTNSVHIDIGPQRDW 430
>gi|220903529|ref|YP_002478841.1| peptidase M15A [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219867828|gb|ACL48163.1| Peptidase M15A [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 127
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D + D L E+++ P I I SG+R NK + SQH L A D
Sbjct: 35 LDSESMDALQELRESLGRP--IVITSGHRCSAHNKAVGG-----VESSQH-LKIAFDCAC 86
Query: 163 PGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSWT 200
P S K A+ G+G Y + F+H+D+G R WT
Sbjct: 87 PANEQDSFVKKAVDAGFRGIGRYPRRGFVHLDMGPRRQWT 126
>gi|254414659|ref|ZP_05028424.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
gi|196178507|gb|EDX73506.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
Length = 397
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+++Y I I S YR TN+ + A KS+H++G AVDF + G+S + +
Sbjct: 310 EVREYLGA-RPITINSWYRDPVTNRKVGG-----ATKSRHLVGDAVDFVVQGISPPQVNQ 363
Query: 173 IAIRLK-----RGGVGYYSKFLHIDV 193
RL+ RGG+ S F HIDV
Sbjct: 364 ---RLESWWGNRGGLASASSFTHIDV 386
>gi|310826518|ref|YP_003958875.1| Peptidase M15A [Eubacterium limosum KIST612]
gi|308738252|gb|ADO35912.1| Peptidase M15A [Eubacterium limosum KIST612]
Length = 182
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 27/199 (13%)
Query: 2 KKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSP---DLIKYHQQSSMSSDLLDQEEVRT 58
KKT ++ L +GL F P S+ P ++++ + + L Q+E +
Sbjct: 4 KKTALWIFLAAGSVGLVF----IFGAVPGKSVVPPQAEIVQPAPEQTGQKPELPQQEPES 59
Query: 59 LKIYVVSTGSKAIVTFKRGSQYN-QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
+ +G A + + E L W ++ M+P L + + +++Y
Sbjct: 60 AE---PESGPAAPAPEMASAHFEMAEYRCDCAGLCDGWPAR----MNPVLLERIEALREY 112
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARK--SQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ +P + I SG R + RN ++ S H G A D Y PGV++ L + A
Sbjct: 113 YGLP--VVITSGVRCE-------GRNTEVGGVAWSFHKRGDAADLYCPGVAVGDLAQTAK 163
Query: 176 RLKRGGVGYY-SKFLHIDV 193
L + YY S ++H++V
Sbjct: 164 DLGMNVLPYYASGYIHVEV 182
>gi|310827971|ref|YP_003960328.1| Peptidase M15A [Eubacterium limosum KIST612]
gi|308739705|gb|ADO37365.1| Peptidase M15A [Eubacterium limosum KIST612]
Length = 186
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ--HVLGKAVDF 160
M P+L + + ++ YF P + I SG R + RN ++ S H G A D
Sbjct: 100 MRPELLEKIEALRCYFGRP--VIITSGVRCE-------ARNEEVGGVSWSFHTRGCAADL 150
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYSK-FLHIDV 193
Y PG+ + L + A L + YYS ++H+++
Sbjct: 151 YCPGIGVGDLAQTAKELGMNVLPYYSSGYIHVEI 184
>gi|220911923|ref|YP_002487232.1| peptidase M15A [Arthrobacter chlorophenolicus A6]
gi|219858801|gb|ACL39143.1| Peptidase M15A [Arthrobacter chlorophenolicus A6]
Length = 1050
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK---SQHVLGKAVD 159
+ P L L +++ P + I SGYR+ E N + R N K +K S+H G+A D
Sbjct: 580 ISPALVAALQKLRDRVGRP--VRITSGYRSWERNVAVYR-NAKPPKKPTLSRHCSGQAAD 636
Query: 160 FYIPGVSLRSLYKIAIR-LKRG-GVGYYSKFLHIDV-GRVRSWT 200
+ G+S + K A+ L G GVG + F H+DV G+ +WT
Sbjct: 637 VTVAGMSGLEIAKAAVDVLGDGIGVGIGAGFAHVDVRGKWTAWT 680
>gi|56698494|ref|YP_168870.1| hypothetical protein SPO3675 [Ruegeria pomeroyi DSS-3]
gi|56680231|gb|AAV96897.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 218
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
S + +DPQ D L ++ P + + S YR+ E N R A S+H+ +
Sbjct: 29 STGKVGIDPQAMDKLQALRDRLGAP--LMLNSAYRSPEHN-----RAEGGAPASEHLKAR 81
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A D + A + G G+Y + F+H+D+G R W
Sbjct: 82 AFDVSMINHDPAEFEAAARAVGFTGFGFYRRNNFIHVDIGPAREW 126
>gi|117924610|ref|YP_865227.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117926115|ref|YP_866732.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117608366|gb|ABK43821.1| Peptidase M15A [Magnetococcus sp. MC-1]
gi|117609871|gb|ABK45326.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 132
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
S +MDP+ + L +++ + P + + S YR N +S K H G AVD
Sbjct: 24 SQEMDPEFMERLEDLRGAYDKP--MPVTSAYRCPNHNASVS----KTGPSGPHTTGMAVD 77
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVG------YYSKFLHIDV 193
+ G L +A+ GVG + ++FLH+D
Sbjct: 78 IQVAGEDAHKLMTLALYHGFTGVGVRQRGPHQARFLHLDT 117
>gi|313116005|ref|ZP_07801430.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310621674|gb|EFQ05204.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 137
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+I +D L L I+++F P + I SGYRT N + +R SQH+LG+A D
Sbjct: 33 TILIDEGLVVLLQCIREHFGKP--VAITSGYRTASHNTKVGG-----SRSSQHLLGRAAD 85
Query: 160 FYIPGVSLRSLYKIAIRLKR--GGVGYYSKFLHIDVGRVRSW 199
+ ++ A L GGVG Y + GR + W
Sbjct: 86 IQVQDTDPLAVAAYAESLMPGWGGVGRYP----VRAGRAKGW 123
>gi|221369939|ref|YP_002521035.1| hypothetical protein RSKD131_4102 [Rhodobacter sphaeroides KD131]
gi|221162991|gb|ACM03962.1| Hypothetical Protein RSKD131_4102 [Rhodobacter sphaeroides KD131]
Length = 235
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ + P+ D L ++ P + + S YR+ E N RN A +S+H+ G A D
Sbjct: 46 LKLHPEALDKLQALRDRLGKP--LIVRSAYRSPEHN-----RNVGGAPRSKHMDGTAFDI 98
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + A + G G+Y S F+HID+G R W
Sbjct: 99 AMSNHDPVAFEAAARAVGFLGFGFYPRSGFIHIDLGPARQW 139
>gi|171060728|ref|YP_001793077.1| peptidase M15A [Leptothrix cholodnii SP-6]
gi|170778173|gb|ACB36312.1| Peptidase M15A [Leptothrix cholodnii SP-6]
Length = 236
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I + SGYR +L+RR K A KSQH+ G+A D PG ++ +L+K IRL
Sbjct: 54 IKVTSGYR----GPVLNRRV-KGAAKSQHLRGEAADLQSPGTAVLALFKRVIRL 102
>gi|332707403|ref|ZP_08427453.1| hypothetical protein LYNGBM3L_37490 [Lyngbya majuscula 3L]
gi|332353894|gb|EGJ33384.1| hypothetical protein LYNGBM3L_37490 [Lyngbya majuscula 3L]
Length = 98
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+++YF I + S YR TN+ + A +S+H+ G AVDF + G+S S+ +
Sbjct: 11 EVREYFG-NRPILVNSWYRDPVTNRQVGG-----ALRSRHLSGDAVDFVVEGISPMSVNR 64
Query: 173 IAIRL-----KRGGVGYYSKFLHIDV 193
RL RGG+ S F HID
Sbjct: 65 ---RLDSWWGSRGGLASASCFTHIDA 87
>gi|332877965|ref|ZP_08445697.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684089|gb|EGJ56954.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 180
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------AIRL 177
I I SGYRT E NK + S H+ A D + G+ + A ++
Sbjct: 48 IIITSGYRTPEHNKKVGG-----VGGSAHLTASAADIVVRGIPPAQVAATIEKLIDAGKM 102
Query: 178 KRGGVGYYSKFLHIDVGRVRS 198
+ GG+G Y F+H D+ R+
Sbjct: 103 QEGGIGIYPNFVHYDIRGTRA 123
>gi|167032658|ref|YP_001667889.1| peptidase M15A [Pseudomonas putida GB-1]
gi|166859146|gb|ABY97553.1| Peptidase M15A [Pseudomonas putida GB-1]
Length = 143
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 16/89 (17%)
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+++ F P I + SGYR+++ N+++ A SQHV G A DF + VS R +
Sbjct: 44 QVRALFDAP--IIVSSGYRSEKVNRLIGG-----AVSSQHVQGLAADFTVVEVSPRETVR 96
Query: 173 IAIRLKRGGVGY------YSKFLHIDVGR 195
R+ GV + + K++H+ V R
Sbjct: 97 ---RISESGVPFDQLILEFDKWVHLSVAR 122
>gi|325274512|ref|ZP_08140577.1| peptidase M15A [Pseudomonas sp. TJI-51]
gi|324100352|gb|EGB98133.1| peptidase M15A [Pseudomonas sp. TJI-51]
Length = 143
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L L +++ F VP I + SGYR+++ N+++ A SQHV G A DF + VS
Sbjct: 38 LCCALEQVRALFGVP--IIVSSGYRSEKVNRLIGG-----AANSQHVQGLAADFTVIEVS 90
Query: 167 LRSLYKIAIRLKRGGVGY------YSKFLHIDVGR 195
R + R+ V + + K++H+ V R
Sbjct: 91 PRETVQ---RISESTVPFDQLILEFDKWVHLSVAR 122
>gi|323947360|gb|EGB43366.1| peptidase M15 [Escherichia coli H120]
Length = 117
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L L +++++F P + I SG R NK N A S HV G+A D I
Sbjct: 23 IDAELLVILEDVREHFGKP--VIINSGNRCPTHNK-----NVGGATNSYHVRGRAADIVI 75
Query: 163 PGVS--LRSLYKIAIRLKRGGVGYYSKFLHID 192
GVS + Y + G+G Y F HID
Sbjct: 76 KGVSPDIVHAYLDGKYPTQYGLGKYKTFTHID 107
>gi|212711503|ref|ZP_03319631.1| hypothetical protein PROVALCAL_02576 [Providencia alcalifaciens DSM
30120]
gi|212685959|gb|EEB45487.1| hypothetical protein PROVALCAL_02576 [Providencia alcalifaciens DSM
30120]
Length = 118
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
++ +L + L ++ +F P + ++SG R + N + A KSQH+LG A D +
Sbjct: 23 VESKLVEILEGVRTHFGKP--VIVVSGRRCAKHNSKVGG-----APKSQHLLGTAADIKV 75
Query: 163 PGVSLRSL--YKIAIRLKRGGVGYYSKFLHIDV 193
V+ + + Y + G+G Y F HIDV
Sbjct: 76 KDVAPKMVADYLESKSPNSYGIGRYKTFTHIDV 108
>gi|260576733|ref|ZP_05844719.1| Peptidase M15A [Rhodobacter sp. SW2]
gi|259021100|gb|EEW24410.1| Peptidase M15A [Rhodobacter sp. SW2]
Length = 224
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+I ++ + D L ++ P + + S YR+ N+ + A S+H+LG A D
Sbjct: 34 AIKINTEALDKLQSLRNRLGKP--MIVRSAYRSPSHNRAVGG-----APASKHMLGTAFD 86
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A + G GYY S F+HID+G RSW
Sbjct: 87 IAMSNHDPVPFEASARAVGFLGFGYYPRSGFMHIDLGPARSW 128
>gi|310829439|ref|YP_003961796.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308741173|gb|ADO38833.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 197
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA--RKSQHVLGKAVDF 160
MD +L + + +++YF P I I SG R + RRN ++ S H+ G A D
Sbjct: 111 MDQELLEKIEALRRYFDQP--IIITSGVRCE-------RRNAEVGGIAASWHLSGHAADL 161
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDVGR 195
Y PGV + A L G + Y +F H ++ R
Sbjct: 162 YCPGVPYDEVAAAARALGLGVIEYPDQQFDHCEIWR 197
>gi|332876564|ref|ZP_08444325.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685490|gb|EGJ58326.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 181
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------AIRL 177
I I SGYRT E NK + S H+ A D + G+ + A ++
Sbjct: 48 IIITSGYRTPEHNKKVGG-----VGGSAHLTASAADIVVRGIPPAQVAATIEKLIDAGKM 102
Query: 178 KRGGVGYYSKFLHIDVGRVRS 198
+ GG+G Y F+H D+ R+
Sbjct: 103 QEGGIGIYKTFVHYDIRGTRA 123
>gi|124005372|ref|ZP_01690213.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123989194|gb|EAY28772.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 572
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY-KI-----AIRL 177
I I S YRT NK + + SQH+ KA D + G + + ++ KI A ++
Sbjct: 492 IAINSSYRTPSHNKAVGGK-----ANSQHLYAKAADIVVKGYTPKQVHTKIEALTKAGKM 546
Query: 178 KRGGVGYYSKFLHIDV 193
+GG+G Y F+H D+
Sbjct: 547 TQGGLGLYKTFVHYDI 562
>gi|170720813|ref|YP_001748501.1| peptidase M15A [Pseudomonas putida W619]
gi|169758816|gb|ACA72132.1| Peptidase M15A [Pseudomonas putida W619]
Length = 143
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
L + S+Q I L D L +++ F +P + I SGYR+ NK + R SQ
Sbjct: 23 LDNTPSQQVISNLHLLCDALEQVRALFGLP--VIISSGYRSPALNKRIGGSPR-----SQ 75
Query: 152 HVLGKAVDFYIPGVSLRSLYK 172
H+ G A DF I G+S R + +
Sbjct: 76 HLRGLAADFEIFGISNREVVR 96
>gi|241554339|ref|YP_002979552.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240863645|gb|ACS61307.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 513
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKR---- 179
+ + S YR+ N L A+ SQH+ KAVDF + G + IR R
Sbjct: 435 VVLTSVYRSPAYNATLP----GAAKSSQHMQFKAVDFKVVGAGTPRDWAKIIRSYRSQKM 490
Query: 180 --GGVGYYSKFLHIDV 193
GGVG Y F+H+D
Sbjct: 491 FEGGVGVYDTFVHVDT 506
>gi|260577073|ref|ZP_05845052.1| Peptidase M15A [Rhodobacter sp. SW2]
gi|259020743|gb|EEW24060.1| Peptidase M15A [Rhodobacter sp. SW2]
Length = 224
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ D L ++ P + +LS YR+ NK + A S+H+LG A D +
Sbjct: 40 EALDKLQTLRNRLGKP--LIVLSAYRSPAHNKAVGG-----APASKHMLGTAFDISMANH 92
Query: 166 SLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A + G G Y S FLHID+G RSW
Sbjct: 93 DPAQFAAAARAVGFLGFGTYPRSGFLHIDLGPARSW 128
>gi|313499770|gb|ADR61136.1| Peptidase M15A [Pseudomonas putida BIRD-1]
Length = 143
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L L +++ F P I I SGYR++ N+++ A SQHV G A DF + VS
Sbjct: 38 LCGALEQVRALFDAP--IIISSGYRSERVNRLIGG-----ASDSQHVQGLAADFTVIEVS 90
Query: 167 LRSLYKIAIRLKRGGVGY------YSKFLHIDVGR 195
R + R+ V + + K++H+ V R
Sbjct: 91 PRETVR---RISESAVPFDQLILEFDKWVHLSVTR 122
>gi|227539919|ref|ZP_03969968.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227240197|gb|EEI90212.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 124
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYF-SVPEYIYIL-----SGYRTQETNKMLSRR 142
N L ++ K + P+ + + + Q ++ +YI SGYRT NK +
Sbjct: 6 NFTLAEFACKDGTAVPPRFYSNVTRLAQNLQNLRDYIGTAVVITGSGYRTAIHNKKV--- 62
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL------KRGGVGYYSKFLHIDVGRV 196
K A SQH+ A D + G + L I +L GG+G Y FLH D+ V
Sbjct: 63 --KGALHSQHLTASAADINVKGYTPDQLAVIIEKLISKGVMAEGGIGIYKTFLHYDIRGV 120
Query: 197 R 197
+
Sbjct: 121 K 121
>gi|26988833|ref|NP_744258.1| peptidase M15A [Pseudomonas putida KT2440]
gi|24983636|gb|AAN67722.1|AE016403_7 conserved domain protein [Pseudomonas putida KT2440]
Length = 143
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L L +++ F P I I SGYR++ N+++ A SQHV G A DF + VS
Sbjct: 38 LCGALEQVRALFDAP--IIISSGYRSERVNRLIGG-----ASDSQHVQGLAADFTVIEVS 90
Query: 167 LRSLYKIAIRLKRGGVGY------YSKFLHIDVGR 195
R + R+ + V + + +++H+ V R
Sbjct: 91 PRETVR---RISKSAVPFDQLILEFDRWVHLSVTR 122
>gi|294102090|ref|YP_003553948.1| Peptidase M15A [Aminobacterium colombiense DSM 12261]
gi|293617070|gb|ADE57224.1| Peptidase M15A [Aminobacterium colombiense DSM 12261]
Length = 125
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 19/111 (17%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D+ P+L L +I+ P I+I SGYR NK + S H G A D
Sbjct: 20 CDIKPKLLSLLEKIRSLVGTP--IFINSGYRCPTHNKRIGG-----VPNSWHTQGVAADI 72
Query: 161 YIPGVSLRSLYKIAIRLKR-------GGVGYYSKFLHIDV-----GRVRSW 199
S + +R + GG+G Y+ +H+DV G +R W
Sbjct: 73 RQAKYSNNVFHSKVLRAYKDGKLSELGGLGLYNGRIHVDVHKPKDGHLRQW 123
>gi|167041100|gb|ABZ05861.1| putative bacterial protein of unknown function (DUF882) [uncultured
marine microorganism HF4000_48F7]
Length = 140
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR------NRKIARKSQHVLGK 156
MD L E+++ + P +++ S +RT++ + ++ + + H G+
Sbjct: 32 MDSLFMAALEELREEWGKP--MHLSSAFRTEDHPRERTKPIKYDHLGNPLPKGGMHARGR 89
Query: 157 AVDFYIPGVSLRSLYKIAIR------LKRGGVGYYSKFLHIDVGRVRSWT 200
AVD I G + ++A++ L + + ++F+H+D G+ R WT
Sbjct: 90 AVDVLIAGSDAVAFLRLALKYFSGVGLSQKDKNWSNRFIHLDDGKQRIWT 139
>gi|322827032|gb|EFZ31383.1| hypothetical protein TCSYLVIO_2305 [Trypanosoma cruzi]
Length = 172
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 114 IQQYFSVP--EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR--S 169
+Q VP EY ++++ + E N +LS R + R+ HV A F G+S + S
Sbjct: 33 VQGVLGVPWLEYAHLVAAHSVAEENSVLSMRGADVVREDPHVASDASKFLENGISRQRNS 92
Query: 170 LYKIAI-RLKRG 180
+ I I RLKRG
Sbjct: 93 RHCIPIYRLKRG 104
>gi|163796233|ref|ZP_02190194.1| hypothetical protein BAL199_18731 [alpha proteobacterium BAL199]
gi|159178375|gb|EDP62917.1| hypothetical protein BAL199_18731 [alpha proteobacterium BAL199]
Length = 156
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L ++++F VP SGYR N + ++ SQHV G+AVDF +PGV+
Sbjct: 48 ILQPVREHFGVP--FAPSSGYRCLVLNTAIGSKS-----TSQHVKGEAVDFEVPGVT 97
>gi|256842332|ref|ZP_05547836.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256736216|gb|EEU49546.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 138
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 5/38 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+YI+SGYR++E N++L A SQH+ G+AVD Y
Sbjct: 59 MYIMSGYRSEELNRLLGG-----APSSQHMKGEAVDIY 91
>gi|134298385|ref|YP_001111881.1| peptidase M15A [Desulfotomaculum reducens MI-1]
gi|134051085|gb|ABO49056.1| Peptidase M15A [Desulfotomaculum reducens MI-1]
Length = 124
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L ++++ P + + SGYR N+ + S H G A D +P ++++ +
Sbjct: 40 LEDLRRLLDKP--VLVNSGYRCPTNNRAVGG-----VVNSFHSKGMAADIRVPRMAVKEI 92
Query: 171 YKIAIRLKRGGVGYYSKFLHIDV 193
+A ++ GG+G Y+ +H+DV
Sbjct: 93 AHLAEKVGFGGIGIYASQVHVDV 115
>gi|148548837|ref|YP_001268939.1| peptidase M15A [Pseudomonas putida F1]
gi|148512895|gb|ABQ79755.1| Peptidase M15A [Pseudomonas putida F1]
Length = 143
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L +++ F P I I SGYR++ N+++ A SQHV G A DF + VS R
Sbjct: 42 LEQVRALFDAP--IIISSGYRSERVNRLIGG-----ASDSQHVQGLAADFTVIEVSPRET 94
Query: 171 YKIAIRLKRGGVGY------YSKFLHIDVGR 195
+ R+ V + + K++H+ V R
Sbjct: 95 VR---RVSESTVPFDQLILEFDKWVHLSVTR 122
>gi|16273552|ref|NP_439807.1| hypothetical protein HI1665 [Haemophilus influenzae Rd KW20]
gi|1176065|sp|P44283|Y1665_HAEIN RecName: Full=Uncharacterized protein HI_1665
gi|1574516|gb|AAC23313.1| predicted coding region HI1665 [Haemophilus influenzae Rd KW20]
Length = 40
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A L+ GGVGYY S F+H+D G VR+W
Sbjct: 10 AESLRNGGVGYYPTSNFIHVDTGPVRTW 37
>gi|330834646|ref|YP_004409374.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
[Metallosphaera cuprina Ar-4]
gi|329566785|gb|AEB94890.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
[Metallosphaera cuprina Ar-4]
Length = 339
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 3 KTEIFRILKVIWIGLYVSVASFFVTSPIYSLSP--DLIKYHQQSSMSSDLLDQEEVRTLK 60
K EI V + +V + + + L P D+IK + + + L +E T +
Sbjct: 34 KKEIEECDVVTFEFEHVDDEPLMLANELDKLKPGLDVIKLKRARHLEKEYLRREGFPTPR 93
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
V G++A+ T + ++N G+ + + YD + I D ++FL E + YF V
Sbjct: 94 FVTVEGGNEALRTLR--DEFNGVGVIKRSEGGYDGRGQFFIKGDLSSYNFLKEEKGYFVV 151
Query: 121 PEYI 124
EY+
Sbjct: 152 EEYV 155
>gi|260654781|ref|ZP_05860269.1| glycoside hydrolase, family 24 [Jonquetella anthropi E3_33 E1]
gi|260630496|gb|EEX48690.1| glycoside hydrolase, family 24 [Jonquetella anthropi E3_33 E1]
Length = 132
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 12/62 (19%)
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRL-------KRGGVGYYSKFLHIDV-----GRVR 197
S+H+ G+A+DF++ G+S ++Y ++ + GG+G Y +HIDV G +R
Sbjct: 65 SKHLKGQAMDFHVRGLSPLAVYNAIVKAWHDGRLPELGGIGLYDWGVHIDVHHAQDGHLR 124
Query: 198 SW 199
W
Sbjct: 125 KW 126
>gi|150006806|ref|YP_001301549.1| hypothetical protein BDI_0132 [Parabacteroides distasonis ATCC
8503]
gi|149935230|gb|ABR41927.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 142
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 5/38 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+YI+SGYR++E N+++ A SQH+ G+AVD Y
Sbjct: 59 MYIMSGYRSEELNRLVGG-----APSSQHMKGEAVDIY 91
>gi|255016466|ref|ZP_05288592.1| hypothetical protein B2_21376 [Bacteroides sp. 2_1_7]
Length = 138
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 5/38 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+YI+SGYR++E N+++ A SQH+ G+AVD Y
Sbjct: 59 MYIMSGYRSEELNRLVGG-----APSSQHMKGEAVDIY 91
>gi|301307948|ref|ZP_07213903.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
gi|300834089|gb|EFK64704.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
Length = 138
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 5/38 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+YI+SGYR++E N+++ A SQH+ G+AVD Y
Sbjct: 59 MYIMSGYRSEELNRLVGG-----APSSQHMKGEAVDIY 91
>gi|254412518|ref|ZP_05026292.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
gi|196180828|gb|EDX75818.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
Length = 553
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
+ S YR N+ + A+ S+H++G A+DF G+S +Y GG+G Y
Sbjct: 479 VTSWYRPPHINRAVGG-----AKYSRHLVGDAIDFVCEGLSGNQVYWSLEPWWPGGLGRY 533
Query: 186 SKF---LHIDVGRVRS 198
S+F HID R+
Sbjct: 534 SRFPNLCHIDARSYRA 549
>gi|262384756|ref|ZP_06077888.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293472|gb|EEY81408.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 138
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+YI+SGYR++E N++L A SQH+ G+ VD Y
Sbjct: 59 MYIMSGYRSEELNRLLGG-----APSSQHMKGEVVDIY 91
>gi|290994446|ref|XP_002679843.1| hypothetical protein NAEGRDRAFT_78955 [Naegleria gruberi]
gi|284093461|gb|EFC47099.1| hypothetical protein NAEGRDRAFT_78955 [Naegleria gruberi]
Length = 1000
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 39 KYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFK-RGSQYNQEGLSQLNRLLYDWHS 97
+Y + SS ++ L QEE+ + A + F ++Y++E Q+N+L Y W +
Sbjct: 843 RYSRSSSSTNKLTSQEEIDEMIKNQPFIKWNAKMDFDPEMNEYHKELFYQVNKLYYIWVA 902
Query: 98 KQ-SIDMDPQLFDFLWEIQQYFSVPE 122
Q SI + L DFL + +++FS E
Sbjct: 903 DQHSIQIQILLSDFLEKTRKFFSKQE 928
>gi|256839995|ref|ZP_05545504.1| peptidase M15A [Parabacteroides sp. D13]
gi|256738925|gb|EEU52250.1| peptidase M15A [Parabacteroides sp. D13]
Length = 158
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L ++ Y + P I I SGYRT E N+++ K SQH+ G+A D I G ++R +
Sbjct: 67 LQPLRDYLNEP--ITINSGYRTAELNRLV-----KGVYGSQHIKGEAADIRISGDAMRVV 119
Query: 171 YKIAIRLKRG----GVGYYSK--FLHIDVGR 195
+ LK G +Y++ F+H+ R
Sbjct: 120 SAV---LKSGIPYDQCIFYTRRNFVHVSYSR 147
>gi|149928297|ref|ZP_01916539.1| putative outer membrane protein [Limnobacter sp. MED105]
gi|149822952|gb|EDM82195.1| putative outer membrane protein [Limnobacter sp. MED105]
Length = 175
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI----P-GVSLRSLYKIAIRLKRG 180
+ SG RT TN + AR S+H+ + FY P GV++ L KI G
Sbjct: 97 VTSGLRTHHTNSI----TEGAARNSRHLPDEHGQFYAMDIKPLGVNIDQLAKILQYPAFG 152
Query: 181 GVGYYSKFLHIDV 193
GVG Y +H D+
Sbjct: 153 GVGVYRSHVHFDI 165
Searching..................................................done
Results from round 2
>gi|254780961|ref|YP_003065374.1| hypothetical protein CLIBASIA_04310 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040638|gb|ACT57434.1| hypothetical protein CLIBASIA_04310 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 200
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK 60
MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK
Sbjct: 1 MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK 60
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV
Sbjct: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG
Sbjct: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
Query: 181 GVGYYSKFLHIDVGRVRSWT 200
GVGYYSKFLHIDVGRVRSWT
Sbjct: 181 GVGYYSKFLHIDVGRVRSWT 200
>gi|85716084|ref|ZP_01047060.1| hypothetical protein NB311A_10910 [Nitrobacter sp. Nb-311A]
gi|85697083|gb|EAQ34965.1| hypothetical protein NB311A_10910 [Nitrobacter sp. Nb-311A]
Length = 536
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 6/201 (2%)
Query: 6 IFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+FR+ + G + S ++ Y + + + D E RTL +
Sbjct: 3 VFRVGSYVLAGFARGLKSLSISRTGYRIGLSSLLLLAGAGSVHDAAALNETRTLSFHHTH 62
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
+ VTFKR +Y++ L QLN L DW S++ MD LFD LWE+ + + I
Sbjct: 63 SKENLTVTFKRDGRYDEGALKQLNHFLRDWRSQEQTTMDRHLFDILWEVYRDVGARQPIN 122
Query: 126 ILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
I+S YR+ TN +L RR+ +AR SQH+LG A+DF+IPGV L + +RL+RGGVG
Sbjct: 123 IISAYRSPATNALLRRRSKNSGVARFSQHMLGHAMDFFIPGVQLEKIRFAGLRLQRGGVG 182
Query: 184 YY----SKFLHIDVGRVRSWT 200
+Y S F+H+D G VR W
Sbjct: 183 FYPKSGSPFVHLDTGHVRHWP 203
>gi|311280160|ref|YP_003942391.1| hypothetical protein Entcl_2859 [Enterobacter cloacae SCF1]
gi|308749355|gb|ADO49107.1| protein of unknown function DUF882 [Enterobacter cloacae SCF1]
Length = 235
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)
Query: 33 LSPDLIKYHQQSSMSSDL---LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
L+ + + + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 64 LALGGVAFGAAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLN 123
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+
Sbjct: 124 HFFRDFRANKIKSIDPKLFDQLYRLQGLLGTNKPVQLVSGYRSLDTNNELRERSRGVAKH 183
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G+SL ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 184 SYHTKGQAMDFHIEGISLSNVRKAALSMRAGGVGYYPSSNFVHIDTGPTRHW 235
>gi|13472639|ref|NP_104206.1| hypothetical protein mll2999 [Mesorhizobium loti MAFF303099]
gi|14023385|dbj|BAB49992.1| mll2999 [Mesorhizobium loti MAFF303099]
Length = 622
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 70/150 (46%), Positives = 98/150 (65%), Gaps = 4/150 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
E R+LK+Y + T KA + +KR +Y EGL ++N +L DW + MDP+L D +WE
Sbjct: 18 ETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEA 77
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++ GYR+ TN ML R+R +A KSQH+LGKA+DFYIPGV L+ L I
Sbjct: 78 YRESGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIG 137
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 138 LKMQGGGVGYYPTSGSPFVHMDVGNVRHWP 167
>gi|319781624|ref|YP_004141100.1| hypothetical protein Mesci_1897 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167512|gb|ADV11050.1| protein of unknown function DUF882 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 608
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 70/169 (41%), Positives = 102/169 (60%), Gaps = 4/169 (2%)
Query: 36 DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDW 95
++ ++ E R+LK+Y + T KA + +KR +Y EGL ++N +L DW
Sbjct: 9 AVLVVAFGFVAAAASGASAETRSLKLYHLHTHEKAEIVYKRNGRYVPEGLRKINIILRDW 68
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+ MDP+L D +WE + +YI ++ GYR+ TN ML R+R +A KSQH+LG
Sbjct: 69 RRNEPTKMDPRLLDLVWEAYREAGATDYIQVVCGYRSPSTNSMLRSRSRGVAEKSQHMLG 128
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
KA+DFYIPGV L+ L I ++++ GGVGYY S F+H+DVG VR W
Sbjct: 129 KAMDFYIPGVPLKKLRNIGLKMQGGGVGYYPSSGSPFVHMDVGNVRHWP 177
>gi|294636884|ref|ZP_06715214.1| nonpeptidase, peptidase M15 family [Edwardsiella tarda ATCC 23685]
gi|291089914|gb|EFE22475.1| nonpeptidase, peptidase M15 family [Edwardsiella tarda ATCC 23685]
Length = 182
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L I + ++ L R L + ++TG + F G Y E L++LN
Sbjct: 12 LALGGAAIGFALLPGVAQATLSTPRPRVLVLNNLNTGERLRAEFFDGQAYIPEELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + Q +DP+LFD ++ +Q + I ++SGYR+ TN+ L R+R +A++S
Sbjct: 72 FFRDYRANQVKRIDPRLFDQIFRLQLLLGNQKPIQLVSGYRSPLTNRELRARSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV+L ++ K A++++ GGVGYY S F+HID G VRSW
Sbjct: 132 YHTKGQAMDFHIEGVALANIRKAALKMRAGGVGYYPRSNFVHIDTGPVRSW 182
>gi|156934582|ref|YP_001438498.1| hypothetical protein ESA_02416 [Cronobacter sakazakii ATCC BAA-894]
gi|156532836|gb|ABU77662.1| hypothetical protein ESA_02416 [Cronobacter sakazakii ATCC BAA-894]
Length = 211
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ ++ + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 40 LLTIGGAALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLN 99
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L ++R +A+
Sbjct: 100 HFFRDYRANKVKAIDPRLFDQLFRLQGLLGTRKPVQLISGYRSVDTNNELRSKSRGVAKH 159
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G+SL ++ K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 160 SYHTKGQAMDFHIEGISLSNIRKAALSLRAGGVGYYPSSNFVHIDTGPLRHW 211
>gi|260460649|ref|ZP_05808900.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
gi|259033754|gb|EEW35014.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
Length = 647
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 71/150 (47%), Positives = 99/150 (66%), Gaps = 4/150 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
EVR+LK+Y + T KA + +KR +Y EGL ++N +L DW + MDP+L D +WE
Sbjct: 42 EVRSLKLYHLHTHEKAEIVYKRNGRYIPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEA 101
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ +YI ++ GYR+ TN ML R+R +A KSQH+LGKA+DFYIPGV L+ L I
Sbjct: 102 YRESGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIG 161
Query: 175 IRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 162 LKMQGGGVGYYPSSGSPFVHMDVGNVRHWP 191
>gi|86748552|ref|YP_485048.1| hypothetical protein RPB_1427 [Rhodopseudomonas palustris HaA2]
gi|86571580|gb|ABD06137.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 529
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ GL + S + Y + + D + RTL + +G V
Sbjct: 1 MLAGLARRLKSLSLPKLGYGAALTSAILLVGAGTVHDASAVGDSRTLSFHHTHSGEDLTV 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y++E L +LN L DW S+ MD LFD LWE+ + + I I+S YR+
Sbjct: 61 TFKRNGRYDEEALGKLNHFLRDWRSQDKTAMDRSLFDILWEVYRDVDGKQPIQIISAYRS 120
Query: 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML RR+ +AR SQH +G+A+DF+IPGV+L + +RL+RGGVG+Y S F
Sbjct: 121 PATNAMLRRRSSGVARHSQHTMGQAMDFFIPGVALEKIRFAGLRLQRGGVGFYPTSGSPF 180
Query: 189 LHIDVGRVRSWT 200
+H+D GRVR W
Sbjct: 181 VHLDTGRVRHWP 192
>gi|269139501|ref|YP_003296202.1| hypothetical protein ETAE_2156 [Edwardsiella tarda EIB202]
gi|267985162|gb|ACY84991.1| hypothetical protein ETAE_2156 [Edwardsiella tarda EIB202]
gi|304559390|gb|ADM42054.1| Putative exported protein [Edwardsiella tarda FL6-60]
Length = 182
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + ++ L R L + ++TG + F G Y E L++LN
Sbjct: 12 LALGGAALGFALLPGVAQATLSTPRPRVLVLNNLNTGERLRAEFFDGRAYIPEELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + Q +DP+LFD ++ +Q + I ++SGYR+ TN L R+R +A++S
Sbjct: 72 FFRDYRANQVKRIDPRLFDQIFRLQVMLGSKKPIQLVSGYRSPHTNSELRERSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV+L ++ K A+R++ GGVGYY S F+HID G VRSW
Sbjct: 132 FHTKGQAMDFHIDGVTLANVRKAAMRMRAGGVGYYPRSNFVHIDTGPVRSW 182
>gi|91975885|ref|YP_568544.1| hypothetical protein RPD_1406 [Rhodopseudomonas palustris BisB5]
gi|91682341|gb|ABE38643.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
BisB5]
Length = 589
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 73/192 (38%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ GL + S Y + D + RTL + +G V
Sbjct: 56 VLAGLTRRLKSLSFPRAGYGAVLSSAVLLAGAGSVHDASAVGDSRTLSFHHTHSGEDLTV 115
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y++E L +LN L DW S+ MD LFD LWE+ + + I I+S YR+
Sbjct: 116 TFKRNGRYDEEALGKLNHFLRDWRSQDKTVMDRTLFDILWEVYRDVDGKQPIQIISAYRS 175
Query: 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML RR+ +AR SQH LG A+DF+IPGV+L + +RL+RGGVG+Y S F
Sbjct: 176 PATNAMLRRRSSGVARHSQHTLGHAMDFHIPGVALEQIRFAGLRLQRGGVGFYPTSGSPF 235
Query: 189 LHIDVGRVRSWT 200
+H+D GR+R W
Sbjct: 236 VHLDTGRIRHWP 247
>gi|307300416|ref|ZP_07580196.1| protein of unknown function DUF882 [Sinorhizobium meliloti BL225C]
gi|307318281|ref|ZP_07597716.1| protein of unknown function DUF882 [Sinorhizobium meliloti AK83]
gi|306895963|gb|EFN26714.1| protein of unknown function DUF882 [Sinorhizobium meliloti AK83]
gi|306904582|gb|EFN35166.1| protein of unknown function DUF882 [Sinorhizobium meliloti BL225C]
Length = 605
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 115/184 (62%), Gaps = 4/184 (2%)
Query: 21 VASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
++ +P S L+ M+ + + RTLK+Y + T KA +T+KR +Y
Sbjct: 19 CSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLYFIHTKEKAQITYKRNGRY 78
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
+Q+GL Q+NR L DW + MDP+L D +WE+ Q +YI+++S YR+ TN ML
Sbjct: 79 DQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLR 138
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRV 196
R++ +A+KSQH+LGKA+DFYIP V L++L ++ ++ + GGVGYY S F+H+DVG V
Sbjct: 139 SRSKGVAKKSQHMLGKAMDFYIPDVKLKTLREVGMKFQVGGVGYYPTSGSPFVHMDVGGV 198
Query: 197 RSWT 200
R+W
Sbjct: 199 RAWP 202
>gi|194434378|ref|ZP_03066641.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Shigella
dysenteriae 1012]
gi|194417362|gb|EDX33468.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Shigella
dysenteriae 1012]
gi|320182005|gb|EFW56910.1| hypothetical protein SGB_00727 [Shigella boydii ATCC 9905]
gi|332095861|gb|EGJ00868.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella dysenteriae 155-74]
Length = 182
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y QE L++LN
Sbjct: 11 LLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+K
Sbjct: 71 HFFRDYRANKIKSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|150397880|ref|YP_001328347.1| hypothetical protein Smed_2682 [Sinorhizobium medicae WSM419]
gi|150029395|gb|ABR61512.1| protein of unknown function DUF882 [Sinorhizobium medicae WSM419]
Length = 608
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 4/184 (2%)
Query: 21 VASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
++ +P S L+ M+ + + RTLK+Y + T KA +TFKR +Y
Sbjct: 19 CSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLYFIHTKEKAQITFKRNGRY 78
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
+Q+GL Q+NR L DW + MDP+L D +WE+ Q +YI+++S YR+ TN ML
Sbjct: 79 DQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLR 138
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRV 196
R++ +A+KSQH+LGKA+DFYIP V L+SL +I ++ + GGVGYY S F+H+DVG V
Sbjct: 139 SRSKGVAKKSQHMLGKAMDFYIPDVRLKSLREIGMKFQVGGVGYYPTSGSPFVHMDVGGV 198
Query: 197 RSWT 200
R+W
Sbjct: 199 RAWP 202
>gi|332092542|gb|EGI97615.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella boydii 5216-82]
Length = 182
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + L R L + + TG F G Y QE L++LN
Sbjct: 11 LLALGGVALGAAILPPPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+K
Sbjct: 71 HFFRDYRANKIKSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|39937249|ref|NP_949525.1| hypothetical protein RPA4189 [Rhodopseudomonas palustris CGA009]
gi|39651107|emb|CAE29630.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 553
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ L + S + Y + D + RTL + +G V
Sbjct: 1 MLAALSRRLKSLSMPMAGYGAVLTTALLLAGAGSVHDASAVGDSRTLSFHHTHSGESLTV 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y+++ L QLN L DW S++ MD QLFD LWE+ + + I I+S YR+
Sbjct: 61 TFKRSGRYDEDALKQLNHFLRDWRSQEQTVMDRQLFDILWEVYRDVDAKQPIQIISAYRS 120
Query: 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML RR+ +AR SQH+ G A+DF+IPGV+L + +RL+RGGVG+Y S F
Sbjct: 121 PATNAMLRRRSSGVARHSQHMQGHAMDFFIPGVALEQIRFAGLRLQRGGVGFYPTSGSPF 180
Query: 189 LHIDVGRVRSWT 200
+H+D G +R W
Sbjct: 181 VHLDTGGIRHWP 192
>gi|90425453|ref|YP_533823.1| hypothetical protein RPC_3978 [Rhodopseudomonas palustris BisB18]
gi|90107467|gb|ABD89504.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
BisB18]
Length = 541
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ G + T + + D + RTL + + V
Sbjct: 1 MLAGFARRFLTLTSTRAGVRAGLASLLLLAGAGSVHDATALGDTRTLSFHHTHSDENLTV 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y++ L ++N L DW S+ MD +LFD LWE+ + + I I+S YR+
Sbjct: 61 TFKRNGRYDEAALREINHFLRDWRSQDQTTMDRRLFDILWEVYRDVDAKQPIQIISAYRS 120
Query: 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML RR+ +AR SQH+LG+A+DFYIPGV+L + +RL+RGGVG+Y S F
Sbjct: 121 PATNAMLRRRSSGVARASQHMLGQAMDFYIPGVALEQIRFAGLRLQRGGVGFYPTSGSPF 180
Query: 189 LHIDVGRVRSWT 200
+H+D G +R W
Sbjct: 181 VHLDTGNIRHWP 192
>gi|254472969|ref|ZP_05086367.1| hypothetical protein PJE062_2040 [Pseudovibrio sp. JE062]
gi|211957690|gb|EEA92892.1| hypothetical protein PJE062_2040 [Pseudovibrio sp. JE062]
Length = 563
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Query: 46 MSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDP 105
++S RTLK+Y T +A +TFKR +Y++EGL +LN L DW + MDP
Sbjct: 29 LTSIASASASTRTLKLYFTHTKERAEITFKRNGRYDKEGLRKLNNFLRDWRQNEPTKMDP 88
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+LFD +WE+ Q +YI+++S YR+ +TN ML +R+ +A+ SQH G+A+DF+IPGV
Sbjct: 89 ELFDLIWEVYQKAGTSKYIHVVSAYRSPKTNNMLRKRSSGVAKNSQHTRGRAMDFFIPGV 148
Query: 166 SLRSLYKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
S L + +R GGVGYY F+H+D G VR W
Sbjct: 149 STAKLRALGLRQHVGGVGYYPRSNTPFVHMDTGSVRHWP 187
>gi|237730889|ref|ZP_04561370.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|283833783|ref|ZP_06353524.1| nonpeptidase, peptidase M15 family [Citrobacter youngae ATCC 29220]
gi|226906428|gb|EEH92346.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|291070448|gb|EFE08557.1| nonpeptidase, peptidase M15 family [Citrobacter youngae ATCC 29220]
Length = 182
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGIALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L R+R +A+K
Sbjct: 71 HFFRDFRANKVKSIDPGLFDQLFRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPSSNFVHIDTGPARHW 182
>gi|327190399|gb|EGE57495.1| hypothetical protein RHECNPAF_430014 [Rhizobium etli CNPAF512]
Length = 468
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 121/200 (60%), Gaps = 11/200 (5%)
Query: 10 LKVIWIGLYVSVASFFVTSPIYS---LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVST 66
LK GL VA+ ++ + P L + +S L E R LK++ T
Sbjct: 19 LKYSLQGLSGGVATLLSRVERFAAQTILPALFAFPALVGTAS--LASAEDRALKLFFTHT 76
Query: 67 GSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYI 126
G KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI++
Sbjct: 77 GEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHV 136
Query: 127 LSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
+S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L IA++++ GGVGY
Sbjct: 137 VSAYRSPATNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLATLRAIAMQMQVGGVGY 196
Query: 185 Y----SKFLHIDVGRVRSWT 200
Y S F+H+DVG VR+W
Sbjct: 197 YPTSGSPFVHLDVGNVRAWP 216
>gi|152969510|ref|YP_001334619.1| hypothetical protein KPN_00953 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|330013903|ref|ZP_08307827.1| Tat pathway signal sequence domain protein [Klebsiella sp. MS 92-3]
gi|150954359|gb|ABR76389.1| hypothetical protein KPN_00953 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|328533308|gb|EGF60057.1| Tat pathway signal sequence domain protein [Klebsiella sp. MS 92-3]
Length = 218
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + L R L + + TG F G Y Q+ L++LN D+ + + +D
Sbjct: 62 APAFATLSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSID 121
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G
Sbjct: 122 PNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEG 181
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+SL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 182 ISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 218
>gi|26246953|ref|NP_752993.1| hypothetical protein c1068 [Escherichia coli CFT073]
gi|91210028|ref|YP_540014.1| hypothetical protein UTI89_C0998 [Escherichia coli UTI89]
gi|26107353|gb|AAN79536.1|AE016758_140 Hypothetical protein ycbK [Escherichia coli CFT073]
gi|91071602|gb|ABE06483.1| conserved hypothetical protein [Escherichia coli UTI89]
gi|281600286|gb|ADA73270.1| hypothetical protein SFxv_0998 [Shigella flexneri 2002017]
Length = 185
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y QE L++LN
Sbjct: 14 LLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 73
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L R+R +A+K
Sbjct: 74 HFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKK 133
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 134 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 185
>gi|16759865|ref|NP_455482.1| hypothetical protein STY0998 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142362|ref|NP_805704.1| hypothetical protein t1938 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62179523|ref|YP_215940.1| hypothetical protein SC0953 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|213160797|ref|ZP_03346507.1| hypothetical protein Salmoneentericaenterica_12363 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424611|ref|ZP_03357394.1| hypothetical protein SentesTyphi_02371 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581708|ref|ZP_03363534.1| hypothetical protein SentesTyph_11079 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213620686|ref|ZP_03373469.1| hypothetical protein SentesTyp_25622 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650527|ref|ZP_03380580.1| hypothetical protein SentesTy_26788 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852479|ref|ZP_03382011.1| hypothetical protein SentesT_06139 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224582806|ref|YP_002636604.1| hypothetical protein SPC_0997 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|25367867|pir||AB0616 probable exported protein STY0998 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502158|emb|CAD05396.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137992|gb|AAO69553.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62127156|gb|AAX64859.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224467333|gb|ACN45163.1| hypothetical protein SPC_0997 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713991|gb|EFZ05562.1| Hedgehog/DD-peptidase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 182
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + S + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGAAILPSPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|182680348|ref|YP_001834494.1| hypothetical protein Bind_3448 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636231|gb|ACB97005.1| protein of unknown function DUF882 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 659
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 3/175 (1%)
Query: 29 PIYSLSP-DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
P ++ L+ + + RT+ +Y TG TF+ Y+ L +
Sbjct: 17 PSFATGAIALMISLALPGSTETAEANGDTRTISLYHSHTGESIEATFRVNGHYDPSVLHK 76
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
LN L D+ + +MDP+LFD +WE + + I + S YR+ ETN ML RR+R +A
Sbjct: 77 LNWFLRDFRRDEQTNMDPRLFDVIWEAYRAAGANQPIVVYSAYRSPETNAMLRRRSRAVA 136
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
SQH+LGKA+D +PG+ + + +I +R++RGGVGYY S F+H+DVG VRSW
Sbjct: 137 EFSQHMLGKAMDTTMPGMPMERIREIGMRMQRGGVGYYPSSNFVHLDVGHVRSWP 191
>gi|15830263|ref|NP_309036.1| hypothetical protein ECs1009 [Escherichia coli O157:H7 str. Sakai]
gi|16128893|ref|NP_415446.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|30062461|ref|NP_836632.1| hypothetical protein S0987 [Shigella flexneri 2a str. 2457T]
gi|56479773|ref|NP_706845.2| hypothetical protein SF0923 [Shigella flexneri 2a str. 301]
gi|74311484|ref|YP_309903.1| hypothetical protein SSON_0929 [Shigella sonnei Ss046]
gi|82544668|ref|YP_408615.1| hypothetical protein SBO_2217 [Shigella boydii Sb227]
gi|82777550|ref|YP_403899.1| hypothetical protein SDY_2331 [Shigella dysenteriae Sd197]
gi|89107776|ref|AP_001556.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|110641123|ref|YP_668853.1| putative exported protein YcbK [Escherichia coli 536]
gi|110804935|ref|YP_688455.1| hypothetical protein SFV_0928 [Shigella flexneri 5 str. 8401]
gi|117623144|ref|YP_852057.1| YcbK [Escherichia coli APEC O1]
gi|157156554|ref|YP_001462145.1| Tat pathway signal sequence domain-containing protein [Escherichia
coli E24377A]
gi|157160447|ref|YP_001457765.1| Tat pathway signal sequence domain-containing protein [Escherichia
coli HS]
gi|168751190|ref|ZP_02776212.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4113]
gi|168757019|ref|ZP_02782026.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4401]
gi|168762936|ref|ZP_02787943.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4501]
gi|168769922|ref|ZP_02794929.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4486]
gi|168776220|ref|ZP_02801227.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4196]
gi|168787356|ref|ZP_02812363.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC869]
gi|170020672|ref|YP_001725626.1| hypothetical protein EcolC_2670 [Escherichia coli ATCC 8739]
gi|170080584|ref|YP_001729904.1| hypothetical protein ECDH10B_0996 [Escherichia coli str. K-12
substr. DH10B]
gi|170680996|ref|YP_001744244.1| Tat pathway signal sequence domain-containing protein [Escherichia
coli SMS-3-5]
gi|187730752|ref|YP_001880873.1| putative exported protein, Tat-dependent [Shigella boydii CDC
3083-94]
gi|188492466|ref|ZP_02999736.1| putative exported protein, Tat-dependent [Escherichia coli 53638]
gi|191166984|ref|ZP_03028807.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B7A]
gi|191172130|ref|ZP_03033674.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
F11]
gi|193064649|ref|ZP_03045728.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E22]
gi|193070747|ref|ZP_03051682.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E110019]
gi|194428400|ref|ZP_03060941.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B171]
gi|194438731|ref|ZP_03070818.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
101-1]
gi|195939659|ref|ZP_03085041.1| hypothetical protein EscherichcoliO157_25180 [Escherichia coli
O157:H7 str. EC4024]
gi|208809048|ref|ZP_03251385.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4206]
gi|208815947|ref|ZP_03257126.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4045]
gi|208822691|ref|ZP_03263010.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4042]
gi|209396717|ref|YP_002269598.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4115]
gi|209918176|ref|YP_002292260.1| hypothetical protein ECSE_0985 [Escherichia coli SE11]
gi|215486051|ref|YP_002328482.1| hypothetical protein E2348C_0919 [Escherichia coli O127:H6 str.
E2348/69]
gi|217324945|ref|ZP_03441029.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. TW14588]
gi|218553513|ref|YP_002386426.1| hypothetical protein ECIAI1_0967 [Escherichia coli IAI1]
gi|218557831|ref|YP_002390744.1| hypothetical protein ECS88_0954 [Escherichia coli S88]
gi|218688769|ref|YP_002396981.1| hypothetical protein ECED1_0956 [Escherichia coli ED1a]
gi|218694400|ref|YP_002402067.1| hypothetical protein EC55989_0972 [Escherichia coli 55989]
gi|218700555|ref|YP_002408184.1| hypothetical protein ECIAI39_2221 [Escherichia coli IAI39]
gi|218704354|ref|YP_002411873.1| hypothetical protein ECUMN_1120 [Escherichia coli UMN026]
gi|227884109|ref|ZP_04001914.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
83972]
gi|237707086|ref|ZP_04537567.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238900184|ref|YP_002925980.1| hypothetical protein BWG_0778 [Escherichia coli BW2952]
gi|253774045|ref|YP_003036876.1| hypothetical protein ECBD_2669 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161040|ref|YP_003044148.1| hypothetical protein ECB_00930 [Escherichia coli B str. REL606]
gi|254792125|ref|YP_003076962.1| hypothetical protein ECSP_1030 [Escherichia coli O157:H7 str.
TW14359]
gi|256020946|ref|ZP_05434811.1| hypothetical protein ShiD9_18657 [Shigella sp. D9]
gi|256023373|ref|ZP_05437238.1| hypothetical protein E4_08364 [Escherichia sp. 4_1_40B]
gi|260843175|ref|YP_003220953.1| hypothetical protein ECO103_0970 [Escherichia coli O103:H2 str.
12009]
gi|260854217|ref|YP_003228108.1| hypothetical protein ECO26_1052 [Escherichia coli O26:H11 str.
11368]
gi|260867098|ref|YP_003233500.1| hypothetical protein ECO111_0994 [Escherichia coli O111:H- str.
11128]
gi|261227429|ref|ZP_05941710.1| hypothetical protein EscherichiacoliO157_22956 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256148|ref|ZP_05948681.1| hypothetical protein EscherichiacoliO157EcO_10009 [Escherichia coli
O157:H7 str. FRIK966]
gi|291281927|ref|YP_003498745.1| hypothetical protein G2583_1161 [Escherichia coli O55:H7 str.
CB9615]
gi|293404230|ref|ZP_06648224.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|293409303|ref|ZP_06652879.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414206|ref|ZP_06656855.1| ycbK protein [Escherichia coli B185]
gi|293433223|ref|ZP_06661651.1| ycbK protein [Escherichia coli B088]
gi|297521035|ref|ZP_06939421.1| hypothetical protein EcolOP_25602 [Escherichia coli OP50]
gi|298380011|ref|ZP_06989616.1| ycbK protein [Escherichia coli FVEC1302]
gi|300823666|ref|ZP_07103793.1| Tat pathway signal sequence protein [Escherichia coli MS 119-7]
gi|300901644|ref|ZP_07119704.1| Tat pathway signal sequence protein [Escherichia coli MS 198-1]
gi|300902915|ref|ZP_07120860.1| Tat pathway signal sequence protein [Escherichia coli MS 84-1]
gi|300921036|ref|ZP_07137423.1| Tat pathway signal sequence [Escherichia coli MS 115-1]
gi|300925396|ref|ZP_07141281.1| Tat pathway signal sequence protein [Escherichia coli MS 182-1]
gi|300929621|ref|ZP_07145083.1| Tat pathway signal sequence protein [Escherichia coli MS 187-1]
gi|300937729|ref|ZP_07152530.1| Tat pathway signal sequence protein [Escherichia coli MS 21-1]
gi|300949711|ref|ZP_07163690.1| Tat pathway signal sequence [Escherichia coli MS 116-1]
gi|300955426|ref|ZP_07167800.1| Tat pathway signal sequence [Escherichia coli MS 175-1]
gi|300978415|ref|ZP_07174263.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1]
gi|300983087|ref|ZP_07176431.1| Tat pathway signal sequence [Escherichia coli MS 200-1]
gi|301022420|ref|ZP_07186303.1| Tat pathway signal sequence [Escherichia coli MS 196-1]
gi|301023048|ref|ZP_07186857.1| Tat pathway signal sequence protein [Escherichia coli MS 69-1]
gi|301047813|ref|ZP_07194865.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1]
gi|301302464|ref|ZP_07208595.1| Tat pathway signal sequence protein [Escherichia coli MS 124-1]
gi|301326640|ref|ZP_07219970.1| Tat pathway signal sequence [Escherichia coli MS 78-1]
gi|301643446|ref|ZP_07243494.1| Tat pathway signal sequence protein [Escherichia coli MS 146-1]
gi|306812621|ref|ZP_07446814.1| hypothetical protein ECNC101_11932 [Escherichia coli NC101]
gi|307137555|ref|ZP_07496911.1| hypothetical protein EcolH7_05411 [Escherichia coli H736]
gi|307311687|ref|ZP_07591327.1| protein of unknown function DUF882 [Escherichia coli W]
gi|309787799|ref|ZP_07682409.1| twin-arginine translocation pathway signal sequence domain protein
[Shigella dysenteriae 1617]
gi|309795088|ref|ZP_07689508.1| Tat pathway signal sequence [Escherichia coli MS 145-7]
gi|312969008|ref|ZP_07783215.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 2362-75]
gi|312971056|ref|ZP_07785235.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 1827-70]
gi|331641452|ref|ZP_08342587.1| putative outer membrane protein [Escherichia coli H736]
gi|331646191|ref|ZP_08347294.1| putative outer membrane protein [Escherichia coli M605]
gi|331651946|ref|ZP_08352965.1| putative outer membrane protein [Escherichia coli M718]
gi|331656997|ref|ZP_08357959.1| putative outer membrane protein [Escherichia coli TA206]
gi|331662340|ref|ZP_08363263.1| putative outer membrane protein [Escherichia coli TA143]
gi|331667304|ref|ZP_08368169.1| putative outer membrane protein [Escherichia coli TA271]
gi|331672462|ref|ZP_08373252.1| putative outer membrane protein [Escherichia coli TA280]
gi|331676714|ref|ZP_08377410.1| putative outer membrane protein [Escherichia coli H591]
gi|331682435|ref|ZP_08383054.1| putative outer membrane protein [Escherichia coli H299]
gi|332282169|ref|ZP_08394582.1| conserved hypothetical protein [Shigella sp. D9]
gi|77416811|sp|P0AB08|YCBK_ECO57 RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|77416812|sp|P0AB07|YCBK_ECOL6 RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|77416813|sp|P0AB06|YCBK_ECOLI RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|77416814|sp|P0AB09|YCBK_SHIFL RecName: Full=Uncharacterized protein ycbK; Flags: Precursor
gi|1787157|gb|AAC74012.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|4062493|dbj|BAA35672.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|13360468|dbj|BAB34432.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|30040707|gb|AAP16438.1| hypothetical protein S0987 [Shigella flexneri 2a str. 2457T]
gi|56383324|gb|AAN42552.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|73854961|gb|AAZ87668.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81241698|gb|ABB62408.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81246079|gb|ABB66787.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|110342715|gb|ABG68952.1| putative exported protein YcbK [Escherichia coli 536]
gi|110614483|gb|ABF03150.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115512268|gb|ABJ00343.1| YcbK [Escherichia coli APEC O1]
gi|157066127|gb|ABV05382.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
HS]
gi|157078584|gb|ABV18292.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E24377A]
gi|169755600|gb|ACA78299.1| protein of unknown function DUF882 [Escherichia coli ATCC 8739]
gi|169888419|gb|ACB02126.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170518714|gb|ACB16892.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
SMS-3-5]
gi|187427744|gb|ACD07018.1| putative exported protein, Tat-dependent [Shigella boydii CDC
3083-94]
gi|187768341|gb|EDU32185.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4196]
gi|188014716|gb|EDU52838.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4113]
gi|188487665|gb|EDU62768.1| putative exported protein, Tat-dependent [Escherichia coli 53638]
gi|189355947|gb|EDU74366.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4401]
gi|189361182|gb|EDU79601.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4486]
gi|189366785|gb|EDU85201.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC4501]
gi|189372770|gb|EDU91186.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
O157:H7 str. EC869]
gi|190902978|gb|EDV62704.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B7A]
gi|190907657|gb|EDV67252.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
F11]
gi|192927706|gb|EDV82321.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E22]
gi|192955940|gb|EDV86408.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
E110019]
gi|194413615|gb|EDX29896.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
B171]
gi|194422363|gb|EDX38363.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
101-1]
gi|208728849|gb|EDZ78450.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4206]
gi|208732595|gb|EDZ81283.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4045]
gi|208738176|gb|EDZ85859.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4042]
gi|209158117|gb|ACI35550.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. EC4115]
gi|209774738|gb|ACI85681.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774740|gb|ACI85682.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774742|gb|ACI85683.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774744|gb|ACI85684.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209774746|gb|ACI85685.1| hypothetical protein ECs1009 [Escherichia coli]
gi|209911435|dbj|BAG76509.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215264123|emb|CAS08467.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217321166|gb|EEC29590.1| putative exported protein, Tat-dependent [Escherichia coli O157:H7
str. TW14588]
gi|218351132|emb|CAU96836.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218360281|emb|CAQ97831.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218364600|emb|CAR02286.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370541|emb|CAR18348.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218426333|emb|CAR07158.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|218431451|emb|CAR12329.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222032657|emb|CAP75396.1| Uncharacterized protein ycbK [Escherichia coli LF82]
gi|226898296|gb|EEH84555.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227838861|gb|EEJ49327.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
83972]
gi|238860455|gb|ACR62453.1| conserved protein [Escherichia coli BW2952]
gi|242376741|emb|CAQ31454.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253325089|gb|ACT29691.1| protein of unknown function DUF882 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972941|gb|ACT38612.1| hypothetical protein ECB_00930 [Escherichia coli B str. REL606]
gi|253977155|gb|ACT42825.1| hypothetical protein ECD_00930 [Escherichia coli BL21(DE3)]
gi|254591525|gb|ACT70886.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|257752866|dbj|BAI24368.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257758322|dbj|BAI29819.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257763454|dbj|BAI34949.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260449928|gb|ACX40350.1| protein of unknown function DUF882 [Escherichia coli DH1]
gi|281178057|dbj|BAI54387.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920777|emb|CBG33840.1| putative exported protein [Escherichia coli 042]
gi|290761800|gb|ADD55761.1| hypothetical protein G2583_1161 [Escherichia coli O55:H7 str.
CB9615]
gi|291324042|gb|EFE63464.1| ycbK protein [Escherichia coli B088]
gi|291428816|gb|EFF01841.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|291434264|gb|EFF07237.1| ycbK protein [Escherichia coli B185]
gi|291469771|gb|EFF12255.1| conserved hypothetical protein [Escherichia coli B354]
gi|294490812|gb|ADE89568.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Escherichia coli
IHE3034]
gi|298279709|gb|EFI21217.1| ycbK protein [Escherichia coli FVEC1302]
gi|299881261|gb|EFI89472.1| Tat pathway signal sequence [Escherichia coli MS 196-1]
gi|300300305|gb|EFJ56690.1| Tat pathway signal sequence protein [Escherichia coli MS 185-1]
gi|300306991|gb|EFJ61511.1| Tat pathway signal sequence [Escherichia coli MS 200-1]
gi|300317649|gb|EFJ67433.1| Tat pathway signal sequence [Escherichia coli MS 175-1]
gi|300354937|gb|EFJ70807.1| Tat pathway signal sequence protein [Escherichia coli MS 198-1]
gi|300397254|gb|EFJ80792.1| Tat pathway signal sequence protein [Escherichia coli MS 69-1]
gi|300405057|gb|EFJ88595.1| Tat pathway signal sequence protein [Escherichia coli MS 84-1]
gi|300409657|gb|EFJ93195.1| Tat pathway signal sequence protein [Escherichia coli MS 45-1]
gi|300412027|gb|EFJ95337.1| Tat pathway signal sequence [Escherichia coli MS 115-1]
gi|300418466|gb|EFK01777.1| Tat pathway signal sequence protein [Escherichia coli MS 182-1]
gi|300450892|gb|EFK14512.1| Tat pathway signal sequence [Escherichia coli MS 116-1]
gi|300457236|gb|EFK20729.1| Tat pathway signal sequence protein [Escherichia coli MS 21-1]
gi|300462458|gb|EFK25951.1| Tat pathway signal sequence protein [Escherichia coli MS 187-1]
gi|300523866|gb|EFK44935.1| Tat pathway signal sequence protein [Escherichia coli MS 119-7]
gi|300842303|gb|EFK70063.1| Tat pathway signal sequence protein [Escherichia coli MS 124-1]
gi|300846685|gb|EFK74445.1| Tat pathway signal sequence [Escherichia coli MS 78-1]
gi|301078160|gb|EFK92966.1| Tat pathway signal sequence protein [Escherichia coli MS 146-1]
gi|305853384|gb|EFM53823.1| hypothetical protein ECNC101_11932 [Escherichia coli NC101]
gi|306908242|gb|EFN38741.1| protein of unknown function DUF882 [Escherichia coli W]
gi|307552765|gb|ADN45540.1| putative exported protein YcbK [Escherichia coli ABU 83972]
gi|307627647|gb|ADN71951.1| hypothetical protein UM146_12920 [Escherichia coli UM146]
gi|308121392|gb|EFO58654.1| Tat pathway signal sequence [Escherichia coli MS 145-7]
gi|308924198|gb|EFP69695.1| twin-arginine translocation pathway signal sequence domain protein
[Shigella dysenteriae 1617]
gi|309701202|emb|CBJ00502.1| putative exported protein [Escherichia coli ETEC H10407]
gi|310336817|gb|EFQ01984.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 1827-70]
gi|312286410|gb|EFR14323.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 2362-75]
gi|312945446|gb|ADR26273.1| hypothetical protein NRG857_04225 [Escherichia coli O83:H1 str. NRG
857C]
gi|313650832|gb|EFS15233.1| twin-arginine translocation pathway signal sequence domain protein
[Shigella flexneri 2a str. 2457T]
gi|315060211|gb|ADT74538.1| conserved hypothetical protein [Escherichia coli W]
gi|315135574|dbj|BAJ42733.1| hypothetical protein ECDH1ME8569_0877 [Escherichia coli DH1]
gi|315257967|gb|EFU37935.1| Tat pathway signal sequence [Escherichia coli MS 85-1]
gi|315287547|gb|EFU46953.1| Tat pathway signal sequence [Escherichia coli MS 110-3]
gi|315291224|gb|EFU50584.1| Tat pathway signal sequence [Escherichia coli MS 153-1]
gi|315296217|gb|EFU55524.1| Tat pathway signal sequence [Escherichia coli MS 16-3]
gi|315619120|gb|EFU99700.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli 3431]
gi|320183825|gb|EFW58658.1| hypothetical protein SGF_03997 [Shigella flexneri CDC 796-83]
gi|320192588|gb|EFW67229.1| hypothetical protein ECoD_00515 [Escherichia coli O157:H7 str.
EC1212]
gi|320196579|gb|EFW71202.1| hypothetical protein EcoM_01120 [Escherichia coli WV_060327]
gi|320202322|gb|EFW76893.1| hypothetical protein ECoL_00368 [Escherichia coli EC4100B]
gi|320637794|gb|EFX07586.1| hypothetical protein ECO5101_23355 [Escherichia coli O157:H7 str.
G5101]
gi|320642919|gb|EFX12120.1| hypothetical protein ECO9389_03106 [Escherichia coli O157:H- str.
493-89]
gi|320648376|gb|EFX17031.1| hypothetical protein ECO2687_19216 [Escherichia coli O157:H- str. H
2687]
gi|320653692|gb|EFX21766.1| hypothetical protein ECO7815_15543 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659837|gb|EFX27393.1| hypothetical protein ECO5905_25053 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664306|gb|EFX31457.1| hypothetical protein ECOSU61_01708 [Escherichia coli O157:H7 str.
LSU-61]
gi|323157187|gb|EFZ43310.1| twin-arginine translocation pathway signal sequence domain protein
[Escherichia coli EPECa14]
gi|323159553|gb|EFZ45533.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli E128010]
gi|323165399|gb|EFZ51186.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella sonnei 53G]
gi|323174973|gb|EFZ60588.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli LT-68]
gi|323175451|gb|EFZ61046.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli 1180]
gi|323185368|gb|EFZ70732.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli 1357]
gi|323190746|gb|EFZ76015.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli RN587/1]
gi|323379229|gb|ADX51497.1| protein of unknown function DUF882 [Escherichia coli KO11]
gi|323938032|gb|EGB34294.1| peptidase M15 [Escherichia coli E1520]
gi|323942842|gb|EGB39007.1| peptidase M15 [Escherichia coli E482]
gi|323947285|gb|EGB43293.1| peptidase M15 [Escherichia coli H120]
gi|323953366|gb|EGB49232.1| peptidase M15 [Escherichia coli H252]
gi|323958231|gb|EGB53940.1| peptidase M15 [Escherichia coli H263]
gi|323962918|gb|EGB58492.1| peptidase M15 [Escherichia coli H489]
gi|323967173|gb|EGB62597.1| peptidase M15 [Escherichia coli M863]
gi|323973199|gb|EGB68391.1| peptidase M15 [Escherichia coli TA007]
gi|323976687|gb|EGB71775.1| peptidase M15 [Escherichia coli TW10509]
gi|324009853|gb|EGB79072.1| Tat pathway signal sequence [Escherichia coli MS 57-2]
gi|324012953|gb|EGB82172.1| Tat pathway signal sequence [Escherichia coli MS 60-1]
gi|324019065|gb|EGB88284.1| Tat pathway signal sequence [Escherichia coli MS 117-3]
gi|324117209|gb|EGC11117.1| peptidase M15 [Escherichia coli E1167]
gi|326338179|gb|EGD62008.1| hypothetical protein ECF_05130 [Escherichia coli O157:H7 str. 1125]
gi|326346156|gb|EGD69894.1| hypothetical protein ECoA_01409 [Escherichia coli O157:H7 str.
1044]
gi|327253716|gb|EGE65345.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Escherichia coli STEC_7v]
gi|330910706|gb|EGH39216.1| exported protein [Escherichia coli AA86]
gi|331038250|gb|EGI10470.1| putative outer membrane protein [Escherichia coli H736]
gi|331044943|gb|EGI17070.1| putative outer membrane protein [Escherichia coli M605]
gi|331050224|gb|EGI22282.1| putative outer membrane protein [Escherichia coli M718]
gi|331055245|gb|EGI27254.1| putative outer membrane protein [Escherichia coli TA206]
gi|331060762|gb|EGI32726.1| putative outer membrane protein [Escherichia coli TA143]
gi|331065660|gb|EGI37553.1| putative outer membrane protein [Escherichia coli TA271]
gi|331070368|gb|EGI41733.1| putative outer membrane protein [Escherichia coli TA280]
gi|331075403|gb|EGI46701.1| putative outer membrane protein [Escherichia coli H591]
gi|331080066|gb|EGI51245.1| putative outer membrane protein [Escherichia coli H299]
gi|332093380|gb|EGI98438.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella boydii 3594-74]
gi|332104521|gb|EGJ07867.1| conserved hypothetical protein [Shigella sp. D9]
gi|332342368|gb|AEE55702.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332759014|gb|EGJ89324.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri 4343-70]
gi|332760125|gb|EGJ90423.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri 2747-71]
gi|332762698|gb|EGJ92961.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-671]
gi|332767713|gb|EGJ97904.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri 2930-71]
gi|333001240|gb|EGK20808.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri VA-6]
gi|333006314|gb|EGK25823.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-218]
gi|333008912|gb|EGK28372.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-272]
gi|333020027|gb|EGK39298.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-304]
gi|333020222|gb|EGK39492.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Shigella flexneri K-227]
Length = 182
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y QE L++LN
Sbjct: 11 LLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L R+R +A+K
Sbjct: 71 HFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|289812173|ref|ZP_06542802.1| hypothetical protein Salmonellaentericaenterica_50997 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 180
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + S + L R L + + TG F G Y Q+ L++LN
Sbjct: 9 LLALGGVALGAAILPSPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 68
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 69 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 128
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 129 SYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 180
>gi|16764356|ref|NP_459971.1| outer membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56413955|ref|YP_151030.1| hypothetical protein SPA1802 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|167994947|ref|ZP_02576037.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168233417|ref|ZP_02658475.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237101|ref|ZP_02662159.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168243765|ref|ZP_02668697.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168264664|ref|ZP_02686637.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168466591|ref|ZP_02700453.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168822071|ref|ZP_02834071.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194444467|ref|YP_002040194.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194447346|ref|YP_002044988.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194471071|ref|ZP_03077055.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194734847|ref|YP_002114049.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251656|ref|YP_002145914.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264289|ref|ZP_03164363.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197362878|ref|YP_002142515.1| hypothetical protein SSPA1675 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245161|ref|YP_002214920.1| hypothetical protein SeD_A1061 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389976|ref|ZP_03216587.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204929901|ref|ZP_03220922.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205352203|ref|YP_002226004.1| hypothetical protein SG0938 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856387|ref|YP_002243038.1| hypothetical protein SEN0900 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238913231|ref|ZP_04657068.1| hypothetical protein SentesTe_19199 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16419509|gb|AAL19930.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56128212|gb|AAV77718.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194403130|gb|ACF63352.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194405650|gb|ACF65869.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194457435|gb|EDX46274.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194710349|gb|ACF89570.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195630897|gb|EDX49483.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197094355|emb|CAR59867.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197215359|gb|ACH52756.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242544|gb|EDY25164.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197289742|gb|EDY29103.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197939677|gb|ACH77010.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199602421|gb|EDZ00967.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204320895|gb|EDZ06096.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205271984|emb|CAR36828.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205327273|gb|EDZ14037.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205332484|gb|EDZ19248.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205337217|gb|EDZ23981.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205341540|gb|EDZ28304.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205346911|gb|EDZ33542.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206708190|emb|CAR32483.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246212|emb|CBG24016.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992735|gb|ACY87620.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157539|emb|CBW17029.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911982|dbj|BAJ35956.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085239|emb|CBY95024.1| Uncharacterized protein ycbK Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223320|gb|EFX48389.1| exported protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322616426|gb|EFY13335.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619676|gb|EFY16551.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322622628|gb|EFY19473.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322629777|gb|EFY26552.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632501|gb|EFY29247.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322637004|gb|EFY33707.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322641457|gb|EFY38095.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322646077|gb|EFY42593.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322654078|gb|EFY50401.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658610|gb|EFY54872.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322663467|gb|EFY59669.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322670203|gb|EFY66343.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322671439|gb|EFY67561.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322676795|gb|EFY72862.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322682719|gb|EFY78738.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322686399|gb|EFY82381.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323129261|gb|ADX16691.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195922|gb|EFZ81089.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323199790|gb|EFZ84879.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323202783|gb|EFZ87819.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323209054|gb|EFZ93991.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323209977|gb|EFZ94884.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323217986|gb|EGA02701.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323219020|gb|EGA03527.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323226591|gb|EGA10796.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323229787|gb|EGA13910.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323233012|gb|EGA17108.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323240747|gb|EGA24789.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243063|gb|EGA27084.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249774|gb|EGA33676.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323252753|gb|EGA36591.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323259167|gb|EGA42811.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259990|gb|EGA43618.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323268009|gb|EGA51488.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323269857|gb|EGA53306.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326622673|gb|EGE29018.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326627247|gb|EGE33590.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332987887|gb|AEF06870.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 182
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|167553002|ref|ZP_02346752.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205322498|gb|EDZ10337.1| putative exported protein, Tat-dependent [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 182
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGVAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|300816969|ref|ZP_07097188.1| Tat pathway signal sequence protein [Escherichia coli MS 107-1]
gi|300530321|gb|EFK51383.1| Tat pathway signal sequence protein [Escherichia coli MS 107-1]
Length = 182
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y QE L++LN
Sbjct: 11 LLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSPGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|116253370|ref|YP_769208.1| hypothetical protein RL3627 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258018|emb|CAK09116.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 456
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 15 IGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
I + +S A FV I P L +S E R LK++ TG +A +T+
Sbjct: 19 IAMLLSCAERFVAKTIL---PALFALPALVGSASF--ASAEDRALKLFFTHTGERATITY 73
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+I+S YR+
Sbjct: 74 KRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPT 133
Query: 135 TNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L +A++++ GGVGYY S F
Sbjct: 134 TNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLSTLRALAMQMQVGGVGYYPTSGSPF 193
Query: 189 LHIDVGRVRSWT 200
+H+DVG VR+W
Sbjct: 194 VHLDVGNVRAWP 205
>gi|290510668|ref|ZP_06550038.1| hypothetical protein HMPREF0485_02438 [Klebsiella sp. 1_1_55]
gi|289777384|gb|EFD85382.1| hypothetical protein HMPREF0485_02438 [Klebsiella sp. 1_1_55]
Length = 208
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + L R L + + TG F G Y Q+ L++LN D+ + + +D
Sbjct: 52 APAFATLSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELARLNHFFRDYRANKIKSID 111
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G
Sbjct: 112 PNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEG 171
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+SL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 172 ISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 208
>gi|296103071|ref|YP_003613217.1| hypothetical protein ECL_02727 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057530|gb|ADF62268.1| hypothetical protein ECL_02727 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 183
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L + + L R L + + TG F G Y Q+ L++LN
Sbjct: 16 GVALGAAAILPTPAFATLSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELARLNHFFR 75
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L R+R +A+KS H
Sbjct: 76 DFRANKVKAIDPGLFDQLFRLQGLLGTSKPVQLISGYRSIDTNNELRARSRGVAKKSYHT 135
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I GVSL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 136 RGQAMDFHIEGVSLANIRKAALSMRAGGVGYYPSSNFVHIDTGPVRHW 183
>gi|238763356|ref|ZP_04624320.1| hypothetical protein ykris0001_3120 [Yersinia kristensenii ATCC
33638]
gi|238698455|gb|EEP91208.1| hypothetical protein ykris0001_3120 [Yersinia kristensenii ATCC
33638]
Length = 182
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LALGGVALGMSLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R R +A+ S
Sbjct: 72 LFRDYRANKVKSIDPRLFDQLYRLQGLLGTTKPVQLISGYRSLDTNNELRERGRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 YHTKGQAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|291616921|ref|YP_003519663.1| YcbK [Pantoea ananatis LMG 20103]
gi|291151951|gb|ADD76535.1| YcbK [Pantoea ananatis LMG 20103]
gi|327393348|dbj|BAK10770.1| twin-arginine translocation Pathway signal YcbK [Pantoea ananatis
AJ13355]
Length = 182
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + +++M+S L R L + + TG F G Y++ LS+LN
Sbjct: 15 GSAAAGLALLPETAMAS--LSTSRPRILTLNNLHTGETLKTEFFNGKSYDKSELSRLNHF 72
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
D+ + ++ +DP LFD L+ +Q + + ++SGYR+ TN ML +A+ S
Sbjct: 73 FRDYRANKTKSIDPHLFDQLYRLQALLETRKPVQLVSGYRSLATNNMLRESGPGVAKHSY 132
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV+L ++ K A++++ GGVGYY S F+HID G VR W
Sbjct: 133 HTKGQAMDFHIEGVTLANVRKAALKMRAGGVGYYPSSNFVHIDTGPVRHW 182
>gi|170769226|ref|ZP_02903679.1| Tat pathway signal sequence domain/peptidase M15 family protein
[Escherichia albertii TW07627]
gi|170121878|gb|EDS90809.1| Tat pathway signal sequence domain/peptidase M15 family protein
[Escherichia albertii TW07627]
Length = 182
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y QE L++LN
Sbjct: 11 LLALGGVALSAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L +R +A+K
Sbjct: 71 HFFRDFRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRAHSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|161614765|ref|YP_001588730.1| hypothetical protein SPAB_02517 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364129|gb|ABX67897.1| hypothetical protein SPAB_02517 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 182
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGATILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|227823367|ref|YP_002827339.1| hypothetical protein NGR_c28400 [Sinorhizobium fredii NGR234]
gi|227342368|gb|ACP26586.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 620
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 21 VASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
++ P S L M+ + + RTLK+Y + T KA +TFKR +Y
Sbjct: 19 CSAITRKGPQVLASIALACSLVTPGMAPPVEAAGQTRTLKLYFIHTKEKAQITFKRNGRY 78
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
+ +GL Q+NR L DW + MDP+L D +WE+ Q +YI+++S YR+ TN ML
Sbjct: 79 DSKGLQQINRFLRDWRRNEPTKMDPRLLDLIWEVYQKSGSRDYIHVVSAYRSPATNGMLR 138
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRV 196
R++ +A+KSQH+LGKA+DFY+P V L++L +I ++ + GGVGYY S F+H+DVG V
Sbjct: 139 SRSKGVAKKSQHMLGKAMDFYLPDVRLKTLREIGMKFQVGGVGYYPTSGSPFVHMDVGGV 198
Query: 197 RSWT 200
R+W
Sbjct: 199 RAWP 202
>gi|320177117|gb|EFW52132.1| hypothetical protein SDB_00380 [Shigella dysenteriae CDC 74-1112]
Length = 182
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y QE L++LN
Sbjct: 11 LLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L R+R +A+K
Sbjct: 71 HFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G++L +++K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGIALSNIHKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|218463502|ref|ZP_03503593.1| hypothetical protein RetlK5_30543 [Rhizobium etli Kim 5]
Length = 613
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVSTPS--------------QAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPATNEMLRGRSRK 144
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRAIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
Query: 200 T 200
Sbjct: 205 P 205
>gi|317491481|ref|ZP_07949917.1| peptidase M15 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921028|gb|EFV42351.1| peptidase M15 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 182
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG + F G Y QE L++LN
Sbjct: 12 LALGGVAMGMAMLPGQALATLSTPRPRILVLNNLNTGEQLKAEFFDGKNYIQEELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD ++ +Q + I ++SGYR+ TN L R +A+ S
Sbjct: 72 LFRDYRANKVKRIDPRLFDQIFRLQAMIGTRKPIQLISGYRSPRTNSELRERGSGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H LG+A+DF+I GV L ++ K A++++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTLGQAMDFHIEGVQLANIRKAALKMRAGGVGYYPRSNFVHIDTGPVRNW 182
>gi|238795868|ref|ZP_04639381.1| hypothetical protein ymoll0001_25400 [Yersinia mollaretii ATCC
43969]
gi|238720331|gb|EEQ12134.1| hypothetical protein ymoll0001_25400 [Yersinia mollaretii ATCC
43969]
Length = 182
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G +YN++ LS+LN
Sbjct: 12 LTLGGVALGMSLLPGQAFATLSTPRPRILTLNNLNTGESLKAEFFDGRRYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + I ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKSIDPRLFDQLYRLQGLLGTTKPIQLISGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H GKA+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 FHTQGKAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|206575875|ref|YP_002239426.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Klebsiella
pneumoniae 342]
gi|288936276|ref|YP_003440335.1| hypothetical protein Kvar_3423 [Klebsiella variicola At-22]
gi|206564933|gb|ACI06709.1| Tat (twin-arginine translocation) pathway signal sequence
domain/peptidase M15 family protein [Klebsiella
pneumoniae 342]
gi|288890985|gb|ADC59303.1| protein of unknown function DUF882 [Klebsiella variicola At-22]
Length = 183
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + L R L + + TG F G Y Q+ L++LN D+ + + +D
Sbjct: 27 APAFATLSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELARLNHFFRDYRANKIKSID 86
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G
Sbjct: 87 PNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEG 146
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+SL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 147 ISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|238749752|ref|ZP_04611257.1| hypothetical protein yrohd0001_30720 [Yersinia rohdei ATCC 43380]
gi|238712407|gb|EEQ04620.1| hypothetical protein yrohd0001_30720 [Yersinia rohdei ATCC 43380]
Length = 182
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LTLGGAALGLSLLPGYAFATLSTPRPRILTLNNLNTGESIKAEFFDGRGYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + + +LSGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKSIDPRLFDQLYRLQGFLGTTKPVQLLSGYRSIDTNNELRGRSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTKGQAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPVRTW 182
>gi|161503875|ref|YP_001570987.1| hypothetical protein SARI_01964 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865222|gb|ABX21845.1| hypothetical protein SARI_01964 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 182
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GV+L +++K A+ + GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGVALSNIHKAALSMGAGGVGYYPRSNFVHIDTGPARHW 182
>gi|86359138|ref|YP_471030.1| hypothetical protein RHE_CH03547 [Rhizobium etli CFN 42]
gi|86283240|gb|ABC92303.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 613
Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P E R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVSTPS--------------QAAGETRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPATNEMLRGRSRN 144
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRAIGMKMQIGGVGFYPKSGSPFVHMDVGGVRAW 204
Query: 200 T 200
Sbjct: 205 P 205
>gi|190893009|ref|YP_001979551.1| hypothetical protein RHECIAT_CH0003426 [Rhizobium etli CIAT 652]
gi|190698288|gb|ACE92373.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 451
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 119/201 (59%), Gaps = 11/201 (5%)
Query: 9 ILKVIWIGLYVSVASFFVTS---PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+L GL +A+ + ++ P L + +S E R LK++
Sbjct: 1 MLTYSIQGLSGGIAALLSRAKRVATQTILPALFAFPALVGTASF--ASAEDRALKLFFTH 58
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+
Sbjct: 59 TGEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIH 118
Query: 126 ILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L A++++ GGVG
Sbjct: 119 VVSAYRSPATNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLSTLRASAMQMQVGGVG 178
Query: 184 YY----SKFLHIDVGRVRSWT 200
YY S F+H+DVG VR+W
Sbjct: 179 YYPTSGSPFVHLDVGNVRAWP 199
>gi|316935703|ref|YP_004110685.1| hypothetical protein Rpdx1_4401 [Rhodopseudomonas palustris DX-1]
gi|315603417|gb|ADU45952.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
DX-1]
Length = 535
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
++ Y + D + RTL + + VTFKR +Y+++ L
Sbjct: 1 MSRAGYGAVLTTTLLLAGAGSVHDASAVGDSRTLSFHHTHSRESLTVTFKRNGRYDEDAL 60
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
QLN L DW S++ MD +LFD LWE+ + + I I+S YR+ TN ML RR+
Sbjct: 61 RQLNHFLRDWRSQEKTTMDRRLFDILWEVYRDVDAKQPIQIISAYRSPSTNAMLRRRSSG 120
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+AR SQH LG A+DF+IPGV L + +RL+RGGVG+Y S F+H+D G VR W
Sbjct: 121 VARHSQHTLGHAMDFFIPGVPLEQIRFAGLRLQRGGVGFYPTSGSPFVHLDTGGVRHWP 179
>gi|157146383|ref|YP_001453702.1| hypothetical protein CKO_02142 [Citrobacter koseri ATCC BAA-895]
gi|157083588|gb|ABV13266.1| hypothetical protein CKO_02142 [Citrobacter koseri ATCC BAA-895]
Length = 182
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLAFGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L +R +A+K
Sbjct: 71 HFFRDFRANKVKAIDPGLFDQLFRLQGLLGTRKPVQLISGYRSLDTNNELRAHSRGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I GVSL ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 131 SYHTKGQAMDFHIEGVSLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|115526101|ref|YP_783012.1| hypothetical protein RPE_4106 [Rhodopseudomonas palustris BisA53]
gi|115520048|gb|ABJ08032.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
BisA53]
Length = 539
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ G + S + + + D + RTL + + V
Sbjct: 1 MLAGFARRLTSVSPSRAGLQAGLASLLLLLGAGSVKDASAVGDSRTLTFHHTHSDENLTV 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y++E L ++N L DW S++ MD +LFD LWE+ + + I I+S YR+
Sbjct: 61 TFKRNGRYDEEALGKINHFLRDWRSQEKTTMDRRLFDILWEVYRDVDGKQPIKIISAYRS 120
Query: 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML RR+ +AR SQH LG A+DFYIPGV L + +RL+RGGVG+Y S F
Sbjct: 121 PATNAMLRRRSSGVARFSQHTLGHAMDFYIPGVPLEQIRAAGLRLQRGGVGFYPTSGSPF 180
Query: 189 LHIDVGRVRSWT 200
+H+D G +R W
Sbjct: 181 VHLDTGNIRHWP 192
>gi|292487844|ref|YP_003530719.1| hypothetical protein EAMY_1361 [Erwinia amylovora CFBP1430]
gi|292899071|ref|YP_003538440.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291198919|emb|CBJ46029.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291553266|emb|CBA20311.1| Uncharacterized protein ycbK [Erwinia amylovora CFBP1430]
gi|312171966|emb|CBX80223.1| Uncharacterized protein ycbK [Erwinia amylovora ATCC BAA-2158]
Length = 182
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + S + L R L + + TG F G Y++ L++LN
Sbjct: 12 LTLGGAALGVALLPSQAFASLSTARPRMLTLNNLHTGESLKTEFFNGKTYDKSELTRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + +S +DP LFD L+ +Q + + + ++SGYR+ TN ML R+ +A+ S
Sbjct: 72 FFRDYRANKSKSIDPHLFDQLFRLQTLLNTRKPVQLISGYRSLATNNMLRERSDGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H LG+A+DF+I G+SL ++ K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 132 YHTLGQAMDFHIEGISLSNIRKAALSLRAGGVGYYPRSNFVHIDTGPVRRW 182
>gi|238792382|ref|ZP_04636016.1| hypothetical protein yinte0001_13100 [Yersinia intermedia ATCC
29909]
gi|238728308|gb|EEQ19828.1| hypothetical protein yinte0001_13100 [Yersinia intermedia ATCC
29909]
Length = 182
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LTLGGAALGISLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGRGYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKSIDPRLFDQLYRLQVLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 FHTKGQAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRNW 182
>gi|259908906|ref|YP_002649262.1| hypothetical protein EpC_22590 [Erwinia pyrifoliae Ep1/96]
gi|224964528|emb|CAX56038.1| Putative exported protein [Erwinia pyrifoliae Ep1/96]
gi|283478901|emb|CAY74817.1| Uncharacterized protein ycbK [Erwinia pyrifoliae DSM 12163]
Length = 182
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + S + L R L + + TG F G Y++ L++LN
Sbjct: 12 LTLGGAALGVALLPSQAFASLSTARPRVLTLNNLHTGESLKTEFFNGKTYDKSELTRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + +S +DP LFD L+ +Q + + + ++SGYR+ TN ML R+ +AR S
Sbjct: 72 FFRDYRANKSKSIDPHLFDQLFRLQTLLNTRKPVQLISGYRSLATNNMLRERSDGVARHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+SL ++ K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 132 YHTKGQAMDFHIEGISLSNIRKAALSLRAGGVGYYPRSNFVHIDTGPVRRW 182
>gi|192293030|ref|YP_001993635.1| hypothetical protein Rpal_4669 [Rhodopseudomonas palustris TIE-1]
gi|192286779|gb|ACF03160.1| protein of unknown function DUF882 [Rhodopseudomonas palustris
TIE-1]
Length = 540
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 28 SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
Y + D + RTL + +G VTFKR +Y+++ L Q
Sbjct: 3 RAGYGAVLTTALLLAGAGSVHDASAVGDSRTLSFHHTHSGESLTVTFKRSGRYDEDALKQ 62
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
LN L DW S++ MD QLFD LWE+ + + I I+S YR+ TN ML RR+ +A
Sbjct: 63 LNHFLRDWRSQEQTVMDRQLFDILWEVYRDVDAKQPIQIISAYRSPATNAMLRRRSSGVA 122
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
R SQH+ G A+DF+IPGV+L + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 123 RHSQHMQGHAMDFFIPGVALEQIRFAGLRLQRGGVGFYPTSGSPFVHLDTGGIRHWP 179
>gi|238789299|ref|ZP_04633086.1| hypothetical protein yfred0001_41080 [Yersinia frederiksenii ATCC
33641]
gi|238722631|gb|EEQ14284.1| hypothetical protein yfred0001_41080 [Yersinia frederiksenii ATCC
33641]
Length = 182
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LTLGGAALGISLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + I ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKTIDPRLFDQLYRLQGLLGTTKPIQLISGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 FHTQGRAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|318606243|emb|CBY27741.1| exported protein [Yersinia enterocolitica subsp. palearctica Y11]
Length = 182
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LALGGAALGMSLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKTIDPRLFDQLYRLQGLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G RSW
Sbjct: 132 FHTQGRAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRSW 182
>gi|238757636|ref|ZP_04618820.1| hypothetical protein yaldo0001_19570 [Yersinia aldovae ATCC 35236]
gi|238704141|gb|EEP96674.1| hypothetical protein yaldo0001_19570 [Yersinia aldovae ATCC 35236]
Length = 196
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN+E LS+LN
Sbjct: 26 LTLGGVALGMSLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGHGYNKEELSRLNH 85
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R R +A+ S
Sbjct: 86 LFRDYRANKVKSIDPRLFDQLYRLQGLLGTTKPVQLISGYRSLDTNNELRERGRGVAKHS 145
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 146 FHTQGRAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 196
>gi|238785819|ref|ZP_04629789.1| hypothetical protein yberc0001_25510 [Yersinia bercovieri ATCC
43970]
gi|238713272|gb|EEQ05314.1| hypothetical protein yberc0001_25510 [Yersinia bercovieri ATCC
43970]
Length = 182
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LTLGGVALGMSLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKTIDPRLFDQLYRLQGLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H GKA+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 FHTQGKAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRTW 182
>gi|238753520|ref|ZP_04614883.1| hypothetical protein yruck0001_20500 [Yersinia ruckeri ATCC 29473]
gi|238708473|gb|EEQ00828.1| hypothetical protein yruck0001_20500 [Yersinia ruckeri ATCC 29473]
Length = 182
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 62/176 (35%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
+T +L L+ H ++ L R L + + TG F G YN+E L
Sbjct: 12 LTLGGTALGLSLLPGHAFAT-----LSTPRPRILTLNNLHTGESIKAEFFDGKGYNKEEL 66
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
++LN + D+ + + +DP+LFD L+ +Q + + ++SGYR+ TN + R+
Sbjct: 67 TRLNHIFRDYRANKVKSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLNTNNEMRERSSG 126
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A+ S H LGKA+DF+I G+ L ++ K A++++ GGVGYY S FLHID G VR+W
Sbjct: 127 VAKHSYHTLGKAMDFHIEGIQLNNIRKAALKMRAGGVGYYVRSNFLHIDTGPVRAW 182
>gi|261339260|ref|ZP_05967118.1| hypothetical protein ENTCAN_05496 [Enterobacter cancerogenus ATCC
35316]
gi|288319117|gb|EFC58055.1| putative peptidase M15 family protein [Enterobacter cancerogenus
ATCC 35316]
Length = 183
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L + + L R L + + TG F G Y Q+ L++LN
Sbjct: 16 GVALGAAAILPTPAFATLSTPRPRILTLNNLHTGESLKAEFFDGRGYIQDELAKLNHFFR 75
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + + +DP LFD L+ +Q + ++SGYR+ +TN L +R +A+KS H
Sbjct: 76 DFRANKIKAIDPGLFDQLFRLQGLLGTSRPVQLISGYRSLDTNNELRAHSRGVAKKSYHT 135
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I GVSL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 136 KGQAMDFHIEGVSLANIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|227111942|ref|ZP_03825598.1| hypothetical protein PcarbP_03203 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|227329503|ref|ZP_03833527.1| hypothetical protein PcarcW_20026 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 182
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG + F G +YN+ LS+LN
Sbjct: 12 LALGGAALGIALLPGQAFATLSTPRPRILTLNNLNTGERLKTEFFDGKRYNKSELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DPQLFD L+ +Q + + ++SGYR +TN L +R +A++S
Sbjct: 72 FFRDYRANKVKTIDPQLFDQLYRLQVMLGTNKPVQLISGYRAIDTNNELRAHSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV L ++ K A++++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTKGQAMDFHIEGVQLANIRKAAMKMRAGGVGYYPRSDFVHIDTGPVRTW 182
>gi|317047573|ref|YP_004115221.1| hypothetical protein Pat9b_1344 [Pantoea sp. At-9b]
gi|316949190|gb|ADU68665.1| protein of unknown function DUF882 [Pantoea sp. At-9b]
Length = 183
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + + + R L + + TG F G Y+++ L++LN
Sbjct: 11 LLLIGGATAGLALLPGSALASISTSRPRILTLNNLHTGETLKTEFFNGKSYDKDELARLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + Q +DP LFD ++ +Q + I ++SGYRT TN ML +A+
Sbjct: 71 HFFRDYRANQIRTIDPHLFDQIYRLQAALGTRKPIQLVSGYRTIATNNMLRESGPGVAKH 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
S H G+A+DF+I G+SL ++ K A+ L+ GGVGYY S F+HID G VR W+
Sbjct: 131 SYHTKGQAMDFHIEGISLSNVRKAALSLRAGGVGYYPRSNFVHIDTGPVRHWS 183
>gi|315180000|gb|ADT86914.1| lipoprotein, hypothetical [Vibrio furnissii NCTC 11218]
Length = 182
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
++ R L + + TG + G +Y + L +LN + D+ + MD +LFD +
Sbjct: 32 DKPRVLAMNNLHTGETLETCYFNGQRYVRSELQRLNHICRDFRQNEVHQMDKKLFDQISR 91
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ + I+SGYR+ TN+ML ++ +A+KS H+LG+A+DF + GVSL+ +++
Sbjct: 92 IQAVLGTEAEVQIISGYRSPATNEMLRGKSSGVAKKSFHMLGQAIDFRLDGVSLKQIHEA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S+F+HID G VR W
Sbjct: 152 ALSLKAGGVGYYPKSQFVHIDTGPVRQW 179
>gi|209550509|ref|YP_002282426.1| hypothetical protein Rleg2_2932 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536265|gb|ACI56200.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 452
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 78/200 (39%), Positives = 119/200 (59%), Gaps = 11/200 (5%)
Query: 10 LKVIWIGLYVSVASFFVTSPIYS---LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVST 66
+K GL +A+ ++ + P L +S E R LK++ T
Sbjct: 1 MKYSLQGLSGGIATLLSRVERFAAQTILPALFALPALVGSASF--ASAEDRALKLFFTHT 58
Query: 67 GSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYI 126
G KA +T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+I
Sbjct: 59 GEKATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHI 118
Query: 127 LSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
+S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L +A++++ GGVGY
Sbjct: 119 VSAYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRALAMQMQVGGVGY 178
Query: 185 Y----SKFLHIDVGRVRSWT 200
Y S F+H+DVG VR+W
Sbjct: 179 YPTSGSPFVHLDVGNVRAWP 198
>gi|15966547|ref|NP_386900.1| hypothetical protein SMc04010 [Sinorhizobium meliloti 1021]
gi|15075818|emb|CAC47373.1| Hypothetical protein SMc04010 [Sinorhizobium meliloti 1021]
Length = 562
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 72/159 (45%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 46 MSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDP 105
M+ + + RTLK+Y + T KA +T+KR +Y+Q+GL Q+NR L DW + MDP
Sbjct: 1 MAPPVEAAGQTRTLKLYFIHTKEKAQITYKRNGRYDQKGLQQINRFLRDWRRNEPTKMDP 60
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L D +WE+ Q +YI+++S YR+ TN ML R++ +A+KSQH+LGKA+DFYIP V
Sbjct: 61 RLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDV 120
Query: 166 SLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
L++L ++ ++ + GGVGYY S F+H+DVG VR+W
Sbjct: 121 KLKTLREVGMKFQVGGVGYYPTSGSPFVHMDVGGVRAWP 159
>gi|123441869|ref|YP_001005852.1| hypothetical protein YE1558 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332162189|ref|YP_004298766.1| hypothetical protein YE105_C2567 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122088830|emb|CAL11636.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|325666419|gb|ADZ43063.1| hypothetical protein YE105_C2567 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860171|emb|CBX70492.1| uncharacterized protein ycbK [Yersinia enterocolitica W22703]
Length = 182
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LALGGVALGMSLLPGQAFATLSTPRPRILTLNNLNTGESIKAEFFDGRSYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKTIDPRLFDQLYRLQGLLGTTKPVQLISGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G RSW
Sbjct: 132 FHTQGRAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPTRSW 182
>gi|238893982|ref|YP_002918716.1| hypothetical protein KP1_1926 [Klebsiella pneumoniae NTUH-K2044]
gi|238546298|dbj|BAH62649.1| hypothetical protein KP1_1926 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 186
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + L R L + + TG F G Y Q+ L++LN D+ + + +D
Sbjct: 30 APAFATLSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSID 89
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G
Sbjct: 90 PNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEG 149
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+SL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 150 ISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 186
>gi|190893374|ref|YP_001979916.1| hypothetical protein RHECIAT_CH0003800 [Rhizobium etli CIAT 652]
gi|190698653|gb|ACE92738.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 612
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
++ W L + V + +L + S S+ E R+LK+Y + TG KA
Sbjct: 12 RLSWRSLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAA--GETRSLKLYFIHTGEKA 69
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+
Sbjct: 70 VITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGF 129
Query: 131 RTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--- 185
R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y
Sbjct: 130 RSPATNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKS 189
Query: 186 -SKFLHIDVGRVRSWT 200
S F+H+DVG VR+W
Sbjct: 190 GSPFVHMDVGGVRAWP 205
>gi|327188782|gb|EGE55976.1| hypothetical protein RHECNPAF_77005 [Rhizobium etli CNPAF512]
Length = 612
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
++ W L + V + +L + S S+ E R+LK+Y + TG KA
Sbjct: 12 RLSWRSLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAA--GETRSLKLYFIHTGEKA 69
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
++T+KR +++ +GL QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+
Sbjct: 70 VITYKRNGKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGF 129
Query: 131 RTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--- 185
R+ TN+ML R+R +A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y
Sbjct: 130 RSPATNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKS 189
Query: 186 -SKFLHIDVGRVRSWT 200
S F+H+DVG VR+W
Sbjct: 190 GSPFVHMDVGGVRAWP 205
>gi|218548442|ref|YP_002382233.1| hypothetical protein EFER_1070 [Escherichia fergusonii ATCC 35469]
gi|218355983|emb|CAQ88599.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 186
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L ++ + L R L + + TG F G Y QE L++LN
Sbjct: 19 GVALGAAILPAAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFR 78
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L +R +A+KS H
Sbjct: 79 DYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRAHSRGVAKKSYHT 138
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 139 KGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 186
>gi|238920325|ref|YP_002933840.1| hypothetical protein NT01EI_2435 [Edwardsiella ictaluri 93-146]
gi|238869894|gb|ACR69605.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 182
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + ++ L R L ++TG + F G Y E L++LN
Sbjct: 12 LALGGAAVGFALLPGVAQATLSTPRPRVLVFNNLNTGERLRAEFFDGRAYIPEELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + +DP+LFD ++ +Q + I ++SGYR+ TN L R+R +A++S
Sbjct: 72 FFRDYRANLVKRIDPRLFDHIFRLQVMLGSKKPIQLVSGYRSPHTNSELRGRSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV+L ++ K A+R++ GGVGYY S F+HID G VRSW
Sbjct: 132 FHTKGQAMDFHIDGVTLANVRKAAMRMRVGGVGYYPRSNFVHIDTGPVRSW 182
>gi|310767193|gb|ADP12143.1| hypothetical protein EJP617_24620 [Erwinia sp. Ejp617]
Length = 182
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + S + L R L + + TG F G Y++ L++LN
Sbjct: 12 LTLGGAALGVALLPSQAFASLSTARPRVLTLNNLHTGESLKTEFFNGKTYDKSELTRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + +S +DP LFD L+ +Q + + + ++SGYR+ TN ML R+ +AR S
Sbjct: 72 FFRDYRANKSKSIDPHLFDQLFRLQTLLNTRKPVQLISGYRSLATNNMLRERSDGVARHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G++L ++ K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 132 YHTKGQAMDFHIEGITLSNIRKAALSLRAGGVGYYPRSNFVHIDTGPVRRW 182
>gi|188025799|ref|ZP_02959871.2| hypothetical protein PROSTU_01770 [Providencia stuartii ATCC 25827]
gi|188020554|gb|EDU58594.1| hypothetical protein PROSTU_01770 [Providencia stuartii ATCC 25827]
Length = 193
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 98/176 (55%), Gaps = 7/176 (3%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
+ + + L+ H ++M+ + + L+ ++TG F G YN+ L
Sbjct: 23 LGAGAAAFGLSLLPSHVFAAMT-----TPKPKILRFQNLNTGEFLKTEFFDGRHYNKSEL 77
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
++LN L D+ + +DP+LFD ++ +Q + I ++SGYR+ ETN L R +
Sbjct: 78 ARLNHLFRDYRCDKVKTIDPKLFDQIYMLQVMLGSNKPIQLISGYRSLETNNALRRSSSG 137
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A+KS H G+A+DF+I G+ L + K A++++ GGVGYY S F+HID G R+W
Sbjct: 138 VAKKSYHTRGQAMDFHIEGIQLSHIRKAALKMRAGGVGYYPKSNFIHIDTGPARTW 193
>gi|116253804|ref|YP_769642.1| hypothetical protein RL4066 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258452|emb|CAK09555.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 615
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVGTPS--------------QAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNEMLRGRSRK 144
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRAIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
Query: 200 T 200
Sbjct: 205 P 205
>gi|262040974|ref|ZP_06014196.1| tat pathway signal sequence domain protein [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259041668|gb|EEW42717.1| tat pathway signal sequence domain protein [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 183
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + L R L + + TG F G Y Q+ L++LN D+ + + +D
Sbjct: 27 APAFATLSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSID 86
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S H G+A+DF+I G
Sbjct: 87 PNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIEG 146
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+SL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 147 ISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|324113743|gb|EGC07718.1| peptidase M15 [Escherichia fergusonii B253]
gi|325496864|gb|EGC94723.1| hypothetical protein ECD227_0961 [Escherichia fergusonii ECD227]
Length = 183
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L ++ + L R L + + TG F G Y QE L++LN
Sbjct: 16 GVALGAAILPAAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFR 75
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L +R +A+KS H
Sbjct: 76 DYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRAHSRGVAKKSYHT 135
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 136 KGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 183
>gi|270261209|ref|ZP_06189482.1| putative exported protein, Tat-dependent [Serratia odorifera 4Rx13]
gi|270044693|gb|EFA17784.1| putative exported protein, Tat-dependent [Serratia odorifera 4Rx13]
Length = 182
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + + TG F G YN++ L +LN
Sbjct: 12 LALGSAAMGIALLPGQAFASLSTSRPRILVVNNMHTGETLKAEFFDGKGYNKDELVRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKIKPIDPRLFDQLYRLQGLLGTNKPVQLVSGYRSLDTNNELRERSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTKGQAMDFHIEGIQLSNIRKAALKMRGGGVGYYPRSNFVHIDTGPVRTW 182
>gi|158422064|ref|YP_001523356.1| hypothetical protein AZC_0440 [Azorhizobium caulinodans ORS 571]
gi|158328953|dbj|BAF86438.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 518
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 8 RILKVIWIGLYVSVA-SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVST 66
R+ IW +A S V SL+ + + + + + RTL T
Sbjct: 8 RLPLRIWTSDRSGIALSPSVRRTARSLAVAATLFLCGTGTLQNAVANGDTRTLTFTNPHT 67
Query: 67 GSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYI 126
G TFK+ +Y+ E L QLN L DW + I+MDP LFD LWE+ + I +
Sbjct: 68 GEAGSFTFKKDGRYDPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEVYREVGATAPITL 127
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS 186
L GYR+ TN ML R++ +A SQH+ G+A+DFYIPGV L L + +RL+RGGVG+Y
Sbjct: 128 LCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMDFYIPGVRLAELRETGLRLQRGGVGFYP 187
Query: 187 --KFLHIDVGRVRSWT 200
F+H+D G VR W
Sbjct: 188 SQNFVHMDTGGVRMWP 203
>gi|15800787|ref|NP_286801.1| hypothetical protein Z1273 [Escherichia coli O157:H7 EDL933]
gi|25367864|pir||G85618 hypothetical protein ycbK [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12514098|gb|AAG55411.1|AE005282_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 182
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y QE L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L R+R +A+KS H G+A+DF+I G++L ++
Sbjct: 92 LYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G R W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPARHW 182
>gi|268590140|ref|ZP_06124361.1| nonpeptidase, peptidase M15 family [Providencia rettgeri DSM 1131]
gi|291314413|gb|EFE54866.1| nonpeptidase, peptidase M15 family [Providencia rettgeri DSM 1131]
Length = 182
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 18/191 (9%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ W+G+ + L+ H ++M+ R L+ ++TG
Sbjct: 8 RRKWLGIGAATIGL-----------SLLPSHVFAAMT-----TPRPRILRFQNINTGESL 51
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
F G +YN+ L++LN D+ + +DP+LFD ++ +Q + + ++SGY
Sbjct: 52 KTEFFDGRRYNKSELARLNHFFRDYRCDKVKTIDPKLFDQIYLLQMMMGTNKPVQLISGY 111
Query: 131 RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKF 188
R+ ETN L ++ +A+KS H G+A+DF+I G+ L ++ K A+++K GGVGYY S F
Sbjct: 112 RSLETNNKLRSKSSGVAKKSYHTRGQAMDFHIEGLQLSNIRKAALKMKAGGVGYYPRSNF 171
Query: 189 LHIDVGRVRSW 199
+HID G R+W
Sbjct: 172 IHIDTGPARTW 182
>gi|261344275|ref|ZP_05971919.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
gi|282567878|gb|EFB73413.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
Length = 182
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Query: 29 PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQL 88
++ L+ H ++M R L+ + TG F G +YN+ L++L
Sbjct: 15 GAAAIGLSLLPNHVLAAM-----STPRPRILRFQNIHTGEFLKTEFFDGRRYNKSELARL 69
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
N L D S + +DP+LFD ++ +Q + + + ++SGYR+ ETN L R++ +A+
Sbjct: 70 NHLFRDHRSDKVKTIDPKLFDQIYILQMMMGINKPVQLISGYRSLETNNELRRKSSGVAK 129
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+S H G+A+DF+I G+ L ++ K A+++ GGVGYY S F+HID G VR+W
Sbjct: 130 QSYHTRGQAMDFHIEGLQLSNVRKAALKMSAGGVGYYPKSNFIHIDTGPVRTW 182
>gi|170749213|ref|YP_001755473.1| hypothetical protein Mrad2831_2806 [Methylobacterium radiotolerans
JCM 2831]
gi|170655735|gb|ACB24790.1| protein of unknown function DUF882 [Methylobacterium radiotolerans
JCM 2831]
Length = 499
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+LS ++ ++ + D + + R+L IY T A +TFKR +Y++ L QLN
Sbjct: 12 TLALSGLVLGLIAGTAETEDAVANGDTRSLTIYHTHTQESATITFKRDGRYDRAALEQLN 71
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL DW + MDP+LFD +WE + + I+++S YR+ TN ML RR++ +A
Sbjct: 72 WLLRDWRVNEPTKMDPRLFDTVWEAYRQVGATQPIHVVSAYRSPGTNAMLRRRSKMVAEY 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
SQH+LGKA+DF++P VS+ + ++ +R++RGGVG+Y F+H+DVG VR W
Sbjct: 132 SQHMLGKAMDFFLPDVSIDRIREVGLRMQRGGVGWYPHAGTPFVHLDVGSVRMWP 186
>gi|118588386|ref|ZP_01545795.1| hypothetical protein SIAM614_23932 [Stappia aggregata IAM 12614]
gi|118439092|gb|EAV45724.1| hypothetical protein SIAM614_23932 [Stappia aggregata IAM 12614]
Length = 609
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 65/153 (42%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
Q E RTLK+Y T + +TFK+ +Y +GL + NR L DW + +DP+L D +
Sbjct: 35 AQAETRTLKLYNTHTKERVSITFKKNGRYLPDGLREANRFLRDWRRNEMTKIDPELLDLV 94
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
WE+ Q + I+++S YR+ TN ML +R+ +A+ SQH LGKA+D++IPGV L +L
Sbjct: 95 WEVYQQVGASQPIHVVSSYRSPATNNMLRKRSSGVAKNSQHTLGKAMDYFIPGVKLATLR 154
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+R + GGVGYY S F+H+D G VR W
Sbjct: 155 ATGLRKEVGGVGYYPRSGSPFVHMDTGSVRHWP 187
>gi|209550870|ref|YP_002282787.1| hypothetical protein Rleg2_3294 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536626|gb|ACI56561.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 597
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 23 VSSPVFVSTPSE--------------AAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGL 68
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 69 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNEMLRGRSRN 128
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 129 SGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 188
Query: 200 T 200
Sbjct: 189 P 189
>gi|260597326|ref|YP_003209897.1| hypothetical protein CTU_15340 [Cronobacter turicensis z3032]
gi|260216503|emb|CBA29676.1| Uncharacterized protein ycbK [Cronobacter turicensis z3032]
Length = 188
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP+LFD
Sbjct: 38 LSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFRDYRANKVKAIDPRLFDQ 97
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + + ++SGYR+ +TN L ++R +A+ S H G+A+DF+I G+ L ++
Sbjct: 98 LFRLQGLLGTRKPVQLISGYRSVDTNNELRSKSRGVAKHSYHTKGQAMDFHIEGILLSNI 157
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 158 RKAALSLRAGGVGYYPSSNFVHIDTGPLRHW 188
>gi|27382243|ref|NP_773772.1| hypothetical protein blr7132 [Bradyrhizobium japonicum USDA 110]
gi|27355414|dbj|BAC52397.1| blr7132 [Bradyrhizobium japonicum USDA 110]
Length = 538
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 9 ILKVIWIGLYVSVASFFVT----SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVV 64
+ + GL A ++ + + + + E +TL +
Sbjct: 1 MGSYVLTGLARQFAVLSLSHAGVKAGSRIGLASVLLLAAAGSVHNAAALNETKTLSFHHT 60
Query: 65 STGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYI 124
+G VTFKR +Y+ L QLN L DW ++ MD LFD LWE+ + + I
Sbjct: 61 HSGEDLTVTFKRDGRYDDASLKQLNHFLRDWRTQDETVMDRHLFDILWEVYRDVDGKQPI 120
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
I+S YR+ TN ML RR+ +AR SQH+LG A+DFYIPGV L + +RL+RGGVG+
Sbjct: 121 QIISSYRSPATNAMLRRRSSGVARFSQHMLGHAMDFYIPGVPLEQIRFAGLRLQRGGVGF 180
Query: 185 Y----SKFLHIDVGRVRSWT 200
Y S F+H+D G +R W
Sbjct: 181 YPTSGSPFVHLDTGSIRHWP 200
>gi|241205885|ref|YP_002976981.1| hypothetical protein Rleg_3189 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859775|gb|ACS57442.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 458
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
Query: 16 GLYVSVASFFVTSPIYSLSPDLIKYHQQSSM-SSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
G +A+ + + L ++ S E R LK++ TG +A +T+
Sbjct: 14 GALGGIATLLSRAERFVAKTILPALFALPALVGSATFASAEDRALKLFFTHTGERATITY 73
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+I+S YR+
Sbjct: 74 KRDGKFDPKGLTQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPT 133
Query: 135 TNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L +A++++ GGVGYY S F
Sbjct: 134 TNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLSTLRALAMQMQVGGVGYYPTSGSPF 193
Query: 189 LHIDVGRVRSWT 200
+H+DVG VR+W
Sbjct: 194 VHLDVGNVRAWP 205
>gi|283784753|ref|YP_003364618.1| hypothetical protein ROD_09951 [Citrobacter rodentium ICC168]
gi|282948207|emb|CBG87774.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 182
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y Q+ L++LN D+ + + +DP LFD
Sbjct: 32 LSTPRPRILTLNNLHTGETIKAEFFDGRAYIQDELAKLNHFFRDYRANKVKSIDPGLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q + ++SGYR+ +TN L +R +A+KS H G+A+DF+I GVSL +
Sbjct: 92 LFRLQGLLGTRRPVQLISGYRSLDTNNELRAHSRGVAKKSYHTKGQAMDFHIEGVSLSHI 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 152 RKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 182
>gi|110635066|ref|YP_675274.1| hypothetical protein Meso_2732 [Mesorhizobium sp. BNC1]
gi|110286050|gb|ABG64109.1| protein of unknown function DUF882 [Chelativorans sp. BNC1]
Length = 635
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
Q E RTL++Y + T +A +TFKR +Y + GL Q+NR L DW + +MDP+L D +
Sbjct: 49 AQAETRTLRLYFIHTKERAEITFKRNGRYVKSGLDQINRFLRDWRRNEPANMDPRLLDLV 108
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
WE+ + +YI ++S YR+ +TN ML R+ +A KSQH+LGKA+DF+IP V L +L
Sbjct: 109 WEVYRESGSRDYINVVSAYRSPQTNAMLRSRSSGVAEKSQHMLGKAMDFFIPDVKLSTLR 168
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
IA+R + GGVGYY S F+H+DVG VR W
Sbjct: 169 AIALRKQMGGVGYYPRSGSPFVHLDVGGVRYWP 201
>gi|146338285|ref|YP_001203333.1| hypothetical protein BRADO1189 [Bradyrhizobium sp. ORS278]
gi|146191091|emb|CAL75096.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 516
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 6/164 (3%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
+ D + RTL + +G VTFKR +Y+++ L +LN L DW ++
Sbjct: 2 GAGTVRDAEALNDTRTLTFHHTHSGEDLTVTFKREGRYDEDALKKLNHFLRDWRTQDETV 61
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDF 160
MD +LFD LWE+ + + I I+S YR+ TN ML RR+ +AR SQH+LG A+DF
Sbjct: 62 MDRRLFDILWEVYRDVDGKQPIQIISSYRSPATNSMLRRRSAHSGVARHSQHMLGHAMDF 121
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
YIPGV L + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 122 YIPGVPLEQIRYAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHWP 165
>gi|212709810|ref|ZP_03317938.1| hypothetical protein PROVALCAL_00858 [Providencia alcalifaciens DSM
30120]
gi|212687621|gb|EEB47149.1| hypothetical protein PROVALCAL_00858 [Providencia alcalifaciens DSM
30120]
Length = 182
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 104/191 (54%), Gaps = 18/191 (9%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ W+G+ + ++ L+ H ++M R L+ ++TG
Sbjct: 8 RRKWLGIGAA-----------AIGLGLLPNHVLAAM-----STPRPRILRFQNLNTGEFL 51
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
F G +YN+ L++LN L D+ + +DP+LFD ++ +Q + + ++SGY
Sbjct: 52 KTEFFDGRRYNKSELARLNHLFRDYRCDKVKTIDPKLFDQIYLLQMMMGTNKPVQLISGY 111
Query: 131 RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKF 188
R+ +TN L R++ +A++S H G+A+DF+I G+ L ++ K A+++ GGVGYY S F
Sbjct: 112 RSLQTNNELRRKSSGVAKQSYHTRGQAMDFHIEGLQLSNVRKAALKMGAGGVGYYPKSNF 171
Query: 189 LHIDVGRVRSW 199
+HID G VR+W
Sbjct: 172 IHIDTGPVRTW 182
>gi|153011573|ref|YP_001372787.1| hypothetical protein Oant_4258 [Ochrobactrum anthropi ATCC 49188]
gi|151563461|gb|ABS16958.1| protein of unknown function DUF882 [Ochrobactrum anthropi ATCC
49188]
Length = 636
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 74/172 (43%), Positives = 103/172 (59%), Gaps = 6/172 (3%)
Query: 35 PDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYD 94
P + S E R+LK+Y V TG KA + FKR +++ +GL +LN L D
Sbjct: 4 PSALAAAAVLMALSPSQASAETRSLKLYYVHTGEKAEIVFKRNGRFDAQGLKKLNVFLRD 63
Query: 95 WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQH 152
W + MDP+LFD +W++ + +YI ++S YR+ TN ML R+ +A+KSQH
Sbjct: 64 WRRNEPTKMDPRLFDLVWQVYRSTGSSQYITVVSAYRSPATNAMLRSRSAKTGVAKKSQH 123
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+LG+A+DFYIPGV L L I +R + GGVGYY S F+H+DVG VRSW
Sbjct: 124 MLGRAMDFYIPGVPLAKLRGIGMRYQIGGVGYYPRSGSPFVHMDVGNVRSWP 175
>gi|188534255|ref|YP_001908052.1| hypothetical protein ETA_21280 [Erwinia tasmaniensis Et1/99]
gi|188029297|emb|CAO97174.1| Putative exported protein [Erwinia tasmaniensis Et1/99]
Length = 182
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + + TG F G Y++ L++LN
Sbjct: 12 LTLGGAALGVALLPGQAFASLSTARPRILTLNNLHTGESLKTEFFNGKSYDKSELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + +S +DP LFD L +Q + + + ++SGYR+ TN ML +A+ S
Sbjct: 72 FFRDYRANKSKSIDPHLFDQLSRLQALLNTRKPVQLISGYRSLVTNNMLRENGDGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H LG+A+DF+I G++L ++ K A+ L+ GGVGYY S F+HID G VR W
Sbjct: 132 YHTLGQAMDFHIEGITLSNIRKAALALRSGGVGYYPKSNFVHIDTGPVRHW 182
>gi|92116781|ref|YP_576510.1| hypothetical protein Nham_1222 [Nitrobacter hamburgensis X14]
gi|91799675|gb|ABE62050.1| protein of unknown function DUF882 [Nitrobacter hamburgensis X14]
Length = 526
Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ G + S + Y + + + D E RTL + + V
Sbjct: 1 MLAGFARVLKSLSIPRAGYHIGLSSLLLLAGAGSVHDAAALNETRTLSFHHTHSSEDLTV 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y++ L QLN L DW S++ MD LFD LWE+ + + I I+S YR+
Sbjct: 61 TFKRNGRYDEAALKQLNHFLRDWRSQEQTTMDRHLFDILWEVYRDVDARQPINIVSAYRS 120
Query: 133 QETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----S 186
TN ML RR++ +AR SQH+LG A+DF+IPGV L + +RL+RGGVG+Y S
Sbjct: 121 PATNAMLRRRSKHTGVARFSQHMLGHAMDFFIPGVPLEKIRFAGLRLQRGGVGFYPKSGS 180
Query: 187 KFLHIDVGRVRSWT 200
F+H+D G VR W
Sbjct: 181 PFVHLDTGHVRHWP 194
>gi|328542489|ref|YP_004302598.1| ATP/GTP-binding site-containing protein A [polymorphum gilvum
SL003B-26A1]
gi|326412236|gb|ADZ69299.1| ATP/GTP-binding site-containing protein A [Polymorphum gilvum
SL003B-26A1]
Length = 582
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
E RTLK+Y T + +TFK+ +Y GL +NR L DW + +DPQL D
Sbjct: 17 AAHAETRTLKLYNTHTKERVEITFKKNGRYVPSGLRDINRFLRDWRRNEMTTIDPQLLDL 76
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
+WE+ Q +YI+++S YR+ TN ML +R+R +A+ SQH GKA+DF+IPGV L +L
Sbjct: 77 VWEVYQEVGGRDYIHVVSSYRSPATNNMLRQRSRGVAQNSQHTRGKAMDFFIPGVDLTTL 136
Query: 171 YKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+R + GGVG+Y S F+H+D G VR W
Sbjct: 137 RATGLRKQVGGVGFYPTSGSPFVHLDTGSVRHWP 170
>gi|148978884|ref|ZP_01815204.1| hypothetical protein VSWAT3_22275 [Vibrionales bacterium SWAT-3]
gi|145962082|gb|EDK27368.1| hypothetical protein VSWAT3_22275 [Vibrionales bacterium SWAT-3]
Length = 182
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Query: 23 SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQ 82
S F + + + + ++ RT+ + + TG + + G+ Y
Sbjct: 4 SLFSRRQFLTYAGGTAVVASLTPSIAFASYPDQPRTISMNNLHTGERLETCYFDGTNYIG 63
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ +++L++L D+ + MD LFD + +IQ + + + I+SGYR+ TN+ L +
Sbjct: 64 DEMARLSKLCRDFRRNEIHPMDKNLFDQITQIQNILGIQKEVQIISGYRSPATNEALRSK 123
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ +A+KS H+LGKA+DF I GV L+ L +A L+ GGVGYY S F+HID G VRSW
Sbjct: 124 SSGVAKKSYHMLGKAIDFRIDGVDLKELRDVAKSLQAGGVGYYARSNFIHIDTGPVRSW 182
>gi|222087064|ref|YP_002545599.1| hypothetical protein Arad_3804 [Agrobacterium radiobacter K84]
gi|221724512|gb|ACM27668.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 646
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 25/204 (12%)
Query: 4 TEIFR-ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIY 62
+EIFR + KV+ +GL + V++P++ SP E R+LKIY
Sbjct: 20 SEIFRKVAKVLAVGLL----ALAVSTPVFVGSPS--------------KASGETRSLKIY 61
Query: 63 VVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE 122
V TG KA++T+KR +++ GL +LNR+L DW Q M+P LFD +W++ + E
Sbjct: 62 FVHTGEKAVITYKRDGKFDPAGLEKLNRILRDWRKNQPTKMNPHLFDLIWQVYRESGSHE 121
Query: 123 YIYILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
+I ++ G+R+ TN+ML R+ +A+KSQH+LG A+DFYIP V L L +I ++L+ G
Sbjct: 122 FINVVCGFRSPGTNEMLRTRSAHTGVAKKSQHMLGNAMDFYIPDVKLTKLREIGMKLQVG 181
Query: 181 GVGYY----SKFLHIDVGRVRSWT 200
GVGYY S F+H+DVG VR+W
Sbjct: 182 GVGYYPTSGSPFVHMDVGGVRAWP 205
>gi|307944486|ref|ZP_07659826.1| ATP/GTP-binding site motif A [Roseibium sp. TrichSKD4]
gi|307772235|gb|EFO31456.1| ATP/GTP-binding site motif A [Roseibium sp. TrichSKD4]
Length = 612
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 70/154 (45%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ E RTLK+Y T K VTFK+ +Y GL + NR L DW + +DP+L D
Sbjct: 22 AAEAETRTLKLYNTHTKEKVSVTFKKNGRYVSSGLREANRFLRDWRRNEITKIDPKLLDL 81
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
+WE+ + +YIY++S YR+ TN ML +R++ +A+KSQH LGKA+DFYIPGV+L L
Sbjct: 82 VWEVYKEVGARDYIYVVSSYRSPATNNMLRKRSKGVAKKSQHTLGKAMDFYIPGVNLSKL 141
Query: 171 YKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
K + + GGVGYY S F+H+D G VR W
Sbjct: 142 RKTGMLKQVGGVGYYPRSGSPFVHMDTGSVRHWP 175
>gi|148258073|ref|YP_001242658.1| hypothetical protein BBta_6865 [Bradyrhizobium sp. BTAi1]
gi|146410246|gb|ABQ38752.1| hypothetical protein BBta_6865 [Bradyrhizobium sp. BTAi1]
Length = 544
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + D E RTL + +G VTFKR +Y+++ L +LN
Sbjct: 22 RSGLATLLLLIGAGSVHDAAALNETRTLSFHHTHSGEDLTVTFKREGRYDEDALKKLNHF 81
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARK 149
L DW ++ MD +LFD LWE+ + + I I+S YR+ TN ML RR+ +AR
Sbjct: 82 LRDWRTQDETVMDRRLFDILWEVYRDVDAKQPIQIISSYRSPATNSMLRRRSAHSGVARH 141
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
SQH+LG A+DFYIP V L + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 142 SQHMLGHAMDFYIPNVPLEQIRFAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHWP 196
>gi|218515849|ref|ZP_03512689.1| hypothetical protein Retl8_20271 [Rhizobium etli 8C-3]
Length = 317
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P E R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVSTPSE--------------AAGETRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPATNEMLRGRSRN 144
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
Query: 200 T 200
Sbjct: 205 P 205
>gi|148557908|ref|YP_001257158.1| hypothetical protein BOV_A0078 [Brucella ovis ATCC 25840]
gi|148369193|gb|ABQ62065.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 659
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 14/199 (7%)
Query: 8 RILKVIWIGLYVSV--ASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+ +W G V A +++ + + ++ Q+S E R+LK+Y V
Sbjct: 9 KYFSKVWTGACSGVMRARASISAGLAIAAVAMVVLPSQASA--------ETRSLKLYYVH 60
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++ Q EYI
Sbjct: 61 TGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQVYQSTGSREYIT 120
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I +R + GGVGYY
Sbjct: 121 VVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYY 180
Query: 186 ----SKFLHIDVGRVRSWT 200
S F+H+DVG VR W
Sbjct: 181 PRSGSPFVHMDVGNVRHWP 199
>gi|146311102|ref|YP_001176176.1| hypothetical protein Ent638_1445 [Enterobacter sp. 638]
gi|145317978|gb|ABP60125.1| protein of unknown function DUF882 [Enterobacter sp. 638]
Length = 183
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L + + L R L + + TG F G Y Q+ L++LN
Sbjct: 16 GVALGAAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQDELAKLNHFFR 75
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + + +DP LFD L+ +Q + + ++SGYR+ +TN L +R +A+KS H
Sbjct: 76 DYRANKIKAIDPGLFDQLFRLQGLLGTRKPVQLVSGYRSLDTNNELRAHSRGVAKKSYHT 135
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I G+SL ++ K A+ L+ GGVGYY S F+HID G R W
Sbjct: 136 KGQAMDFHIEGISLANVRKAALSLRAGGVGYYPRSNFVHIDTGPNRHW 183
>gi|22126640|ref|NP_670063.1| hypothetical protein y2762 [Yersinia pestis KIM 10]
gi|45441012|ref|NP_992551.1| hypothetical protein YP_1185 [Yersinia pestis biovar Microtus str.
91001]
gi|51595772|ref|YP_069963.1| hypothetical protein YPTB1432 [Yersinia pseudotuberculosis IP
32953]
gi|108806699|ref|YP_650615.1| hypothetical protein YPA_0702 [Yersinia pestis Antiqua]
gi|108812730|ref|YP_648497.1| hypothetical protein YPN_2569 [Yersinia pestis Nepal516]
gi|145599559|ref|YP_001163635.1| hypothetical protein YPDSF_2287 [Yersinia pestis Pestoides F]
gi|149366665|ref|ZP_01888699.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153950542|ref|YP_001401527.1| hypothetical protein YpsIP31758_2562 [Yersinia pseudotuberculosis
IP 31758]
gi|162420348|ref|YP_001606447.1| hypothetical protein YpAngola_A1974 [Yersinia pestis Angola]
gi|165924690|ref|ZP_02220522.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938975|ref|ZP_02227528.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009917|ref|ZP_02230815.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211283|ref|ZP_02237318.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399792|ref|ZP_02305310.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419539|ref|ZP_02311292.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424065|ref|ZP_02315818.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170024878|ref|YP_001721383.1| hypothetical protein YPK_2653 [Yersinia pseudotuberculosis YPIII]
gi|186894851|ref|YP_001871963.1| hypothetical protein YPTS_1534 [Yersinia pseudotuberculosis PB1/+]
gi|218928556|ref|YP_002346431.1| hypothetical protein YPO1408 [Yersinia pestis CO92]
gi|229841380|ref|ZP_04461539.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843485|ref|ZP_04463631.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229895859|ref|ZP_04511029.1| conserved protein [Yersinia pestis Pestoides A]
gi|229903135|ref|ZP_04518248.1| conserved protein [Yersinia pestis Nepal516]
gi|270486928|ref|ZP_06204002.1| Tat (twin-arginine translocation) pathway signal sequence [Yersinia
pestis KIM D27]
gi|294503395|ref|YP_003567457.1| hypothetical protein YPZ3_1285 [Yersinia pestis Z176003]
gi|21959652|gb|AAM86314.1|AE013879_4 hypothetical protein y2762 [Yersinia pestis KIM 10]
gi|45435871|gb|AAS61428.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589054|emb|CAH20672.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108776378|gb|ABG18897.1| hypothetical protein YPN_2569 [Yersinia pestis Nepal516]
gi|108778612|gb|ABG12670.1| hypothetical protein YPA_0702 [Yersinia pestis Antiqua]
gi|115347167|emb|CAL20060.1| putative exported protein [Yersinia pestis CO92]
gi|145211255|gb|ABP40662.1| hypothetical protein YPDSF_2287 [Yersinia pestis Pestoides F]
gi|149291039|gb|EDM41114.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152962037|gb|ABS49498.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162353163|gb|ABX87111.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165913122|gb|EDR31746.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923750|gb|EDR40882.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991313|gb|EDR43614.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207054|gb|EDR51534.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962280|gb|EDR58301.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050500|gb|EDR61908.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056914|gb|EDR66677.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169751412|gb|ACA68930.1| protein of unknown function DUF882 [Yersinia pseudotuberculosis
YPIII]
gi|186697877|gb|ACC88506.1| protein of unknown function DUF882 [Yersinia pseudotuberculosis
PB1/+]
gi|229678905|gb|EEO75008.1| conserved protein [Yersinia pestis Nepal516]
gi|229689832|gb|EEO81893.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229697746|gb|EEO87793.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700782|gb|EEO88811.1| conserved protein [Yersinia pestis Pestoides A]
gi|262361437|gb|ACY58158.1| hypothetical protein YPD4_1250 [Yersinia pestis D106004]
gi|262365028|gb|ACY61585.1| hypothetical protein YPD8_0897 [Yersinia pestis D182038]
gi|270335432|gb|EFA46209.1| Tat (twin-arginine translocation) pathway signal sequence [Yersinia
pestis KIM D27]
gi|294353854|gb|ADE64195.1| hypothetical protein YPZ3_1285 [Yersinia pestis Z176003]
gi|320015730|gb|ADV99301.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 182
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
+ D+ + + +DP+LFD L+ +Q + + ++SGYR+ TN L +R +A++S
Sbjct: 72 IFRDYRANKVKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNELREHSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L + K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 YHTKGQAMDFHIEGIQLSYIRKAALKMRAGGVGYYPRSNFVHIDTGPTRAW 182
>gi|295096374|emb|CBK85464.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 183
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L + + L R L + + TG F G Y Q+ L++LN
Sbjct: 16 GVALGAAAILPTPAFATLSTPRPRILTLNNLHTGETLKAEFFDGRGYIQDELARLNHFFR 75
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + + +DP LFD L+ +Q + ++SGYR+ +TN L +R +A+K H
Sbjct: 76 DFRANKIKAIDPGLFDQLYRLQGLLGTKRPVQLISGYRSLDTNNELRAHSRGVAKKDYHT 135
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I GVSL ++ K A+ ++ GGVGYY S F+HID G VR W
Sbjct: 136 KGQAMDFHIEGVSLANIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW 183
>gi|253688168|ref|YP_003017358.1| hypothetical protein PC1_1781 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754746|gb|ACT12822.1| protein of unknown function DUF882 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 182
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + L R L + ++TG + F G +YN+ LS+LN
Sbjct: 12 LALGGAAFGIALLPGQAFATLSTPRPRILTLDNLNTGERLKTEFFDGKRYNKSELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DPQLFD L+ +Q + + ++SGYR +TN L +R +A++S
Sbjct: 72 FFRDYRANKIKTIDPQLFDQLYRLQVMLGTNKPVQLISGYRAIDTNNELRAHSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV L ++ K A++++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTKGQAMDFHIEGVQLANIRKAAMKMRAGGVGYYPRSDFVHIDTGPVRTW 182
>gi|304397086|ref|ZP_07378965.1| protein of unknown function DUF882 [Pantoea sp. aB]
gi|304355235|gb|EFM19603.1| protein of unknown function DUF882 [Pantoea sp. aB]
Length = 182
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y+++ LS+LN D+ + + +DP LFD
Sbjct: 32 LSTSRPRVLMLNNLHTGETLKTEFFNGKSYDKDELSRLNHFFRDYRANKVKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + + I ++SGYR+ TN ML +A+ S H G+A+DF+I GVSL ++
Sbjct: 92 IFRLQALLGMRKPIQLVSGYRSLATNNMLRESGPGVAKHSYHTKGQAMDFHIEGVSLANV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPIRHW 182
>gi|225628563|ref|ZP_03786597.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261215592|ref|ZP_05929873.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|225616409|gb|EEH13457.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260917199|gb|EEX84060.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|326410271|gb|ADZ67335.1| ATP/GTP-binding site motif A (P-loop) [Brucella melitensis M28]
gi|326553564|gb|ADZ88203.1| ATP/GTP-binding site motif A (P-loop) [Brucella melitensis M5-90]
Length = 659
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 14/199 (7%)
Query: 8 RILKVIWIGLYVSV--ASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+ +W G V A +++ + + ++ Q+S E R+LK+Y V
Sbjct: 9 KYFSKVWTGACSGVMRARASISAGLAIAAVAMVVLPSQASA--------ETRSLKLYYVH 60
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++ Q EYI
Sbjct: 61 TGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQVYQSTGSREYIT 120
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I +R + GGVGYY
Sbjct: 121 VVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYY 180
Query: 186 ----SKFLHIDVGRVRSWT 200
S F+H+DVG VR W
Sbjct: 181 PRSGSPFVHMDVGNVRHWP 199
>gi|189022309|ref|YP_001932050.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
gi|237816605|ref|ZP_04595597.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus str. 2308
A]
gi|189020883|gb|ACD73604.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
gi|237787418|gb|EEP61634.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus str. 2308
A]
Length = 659
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 14/199 (7%)
Query: 8 RILKVIWIGLYVSV--ASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+ +W G V A +++ + + ++ Q+S E R+LK+Y V
Sbjct: 9 KYFSKVWTGACSGVMRARASISAGLAIAAVAMVVLPSQASA--------ETRSLKLYYVH 60
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++ Q EYI
Sbjct: 61 TGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQVYQSTGSREYIT 120
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I +R + GGVGYY
Sbjct: 121 VVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYY 180
Query: 186 ----SKFLHIDVGRVRSWT 200
S F+H+DVG VR W
Sbjct: 181 PRSGSPFVHMDVGNVRHWP 199
>gi|50121469|ref|YP_050636.1| hypothetical protein ECA2545 [Pectobacterium atrosepticum SCRI1043]
gi|261821333|ref|YP_003259439.1| hypothetical protein Pecwa_2053 [Pectobacterium wasabiae WPP163]
gi|49611995|emb|CAG75444.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
gi|261605346|gb|ACX87832.1| protein of unknown function DUF882 [Pectobacterium wasabiae WPP163]
Length = 182
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG + F G +YN+ LS+LN
Sbjct: 12 LALGGAALGIALLPGQAFATLSTPRPRILTLDNLNTGERLKTEFFDGKRYNKSELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DPQLFD L+ +Q + + ++SGYR +TN L +R +A++S
Sbjct: 72 FFRDYRANKVKMIDPQLFDQLYRLQVMLGTNKPVQLISGYRAIDTNNELRAHSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I GV L ++ K A +++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTKGQAMDFHIEGVQLANIRKAATKMRAGGVGYYPRSDFVHIDTGPVRTW 182
>gi|239834489|ref|ZP_04682817.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822552|gb|EEQ94121.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 687
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 72/155 (46%), Positives = 100/155 (64%), Gaps = 6/155 (3%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FKR +++ +GL +LN L DW + MDP+LFD +
Sbjct: 72 ASAETRSLKLYYVHTGEKAEIVFKRNGRFDAQGLKKLNVFLRDWRRNEPTKMDPRLFDLI 131
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVSLRS 169
W++ + +YI ++S YR+ TN ML R+ +A+KSQH+LG+A+DFYIPGV L
Sbjct: 132 WQVYRSTGSSQYITVVSAYRSPATNAMLRSRSANTGVAKKSQHMLGRAMDFYIPGVPLAK 191
Query: 170 LYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
L I +R + GGVGYY S F+H+DVG VRSW
Sbjct: 192 LRGIGMRYQIGGVGYYPRSGSPFVHMDVGNVRSWP 226
>gi|298293067|ref|YP_003695006.1| hypothetical protein Snov_3112 [Starkeya novella DSM 506]
gi|296929578|gb|ADH90387.1| protein of unknown function DUF882 [Starkeya novella DSM 506]
Length = 549
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 70/162 (43%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
+ + D + + RTL + V +G+ A VTFKR +Y+ L QLN L+ DW K+ +
Sbjct: 26 STDLLQDAVANGDTRTLSFHHVHSGAAATVTFKRNGRYDPAALKQLNVLMQDWRRKEPTN 85
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MDPQLFD +WE+ + I I+ GYR+ TN ML R+R +A+ S H+ GKA+DFYI
Sbjct: 86 MDPQLFDIVWEVYRETGATAPIEIIGGYRSPATNAMLRSRSRGVAQTSLHMQGKAMDFYI 145
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
PGV L + + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 146 PGVPLSKIREAGLRLQRGGVGFYPTSGSPFVHLDTGGIRHWP 187
>gi|251789272|ref|YP_003003993.1| hypothetical protein Dd1591_1661 [Dickeya zeae Ech1591]
gi|247537893|gb|ACT06514.1| protein of unknown function DUF882 [Dickeya zeae Ech1591]
Length = 182
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + S L R L + ++TG + V F G +YN+E LS+LN
Sbjct: 12 LALGGAALGIALLPGQSFASLSTARPRILTLNNLNTGERIKVEFFDGRRYNKEELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DP LFD L+ +Q + + ++SGYR+ TN+ L ++ +A++S
Sbjct: 72 FFRDYRANKVKTIDPSLFDQLYRLQVMLGTTKPVQLISGYRSYSTNEDLRSHSKGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H LGKA+DF+I GV L ++ K A++++ GGVGYY S F+HID G +R+W
Sbjct: 132 YHTLGKAMDFHIEGVQLANIRKAAVKMRAGGVGYYPQSNFVHIDTGAIRTW 182
>gi|157369970|ref|YP_001477959.1| hypothetical protein Spro_1727 [Serratia proteamaculans 568]
gi|157321734|gb|ABV40831.1| protein of unknown function DUF882 [Serratia proteamaculans 568]
Length = 182
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + + TG F G YN++ L +LN
Sbjct: 12 LALGSAAVGIALLPGQAFASLSTSRPRILVVNNMHTGESLKAEFFDGKGYNKDELVRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+R +A+ S
Sbjct: 72 LFRDYRANKVKSIDPRLFDHLYRLQGLLGTNKPVQLVSGYRSLDTNNELRARSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A+++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTKGQAMDFHIEGIQLSNIRKAALKMSAGGVGYYPRSNFVHIDTGPVRTW 182
>gi|217978309|ref|YP_002362456.1| protein of unknown function DUF882 [Methylocella silvestris BL2]
gi|217503685|gb|ACK51094.1| protein of unknown function DUF882 [Methylocella silvestris BL2]
Length = 625
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
S + + RTL +Y TG TF+ Y+ L +LN L DW +
Sbjct: 31 AGSSTETAEANGDTRTLNLYHSHTGESIQATFRVNGSYDPAVLEKLNYFLRDWRNNDRTR 90
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MDP+LFD +WE+ + + I I S YR+ ETN ML RR+ +A SQH+LGKA+D +
Sbjct: 91 MDPRLFDTVWEVYRTAGATQPIVIFSAYRSPETNAMLRRRSSAVAEYSQHMLGKAMDTTM 150
Query: 163 PGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSWT 200
PG+S+ + +I I+++RGGVG+YS F+H+DVG VRSW
Sbjct: 151 PGMSMEQIREIGIKMQRGGVGFYSRENFVHLDVGGVRSWP 190
>gi|271500171|ref|YP_003333196.1| hypothetical protein Dd586_1625 [Dickeya dadantii Ech586]
gi|270343726|gb|ACZ76491.1| protein of unknown function DUF882 [Dickeya dadantii Ech586]
Length = 182
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
++ + + L R L + ++TG V F G +YN+ LS+LN
Sbjct: 12 LAIGGAALGMALLPGQALASLSTARPRILTLNNINTGEHIKVEFFDGRRYNKAELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DP LFD L+ +Q + + ++SGYR+ TN+ L ++ +A++S
Sbjct: 72 FFRDYRANKVKTIDPALFDQLYRLQVMLGTTKPVQLISGYRSYSTNEDLRSHSKGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H GKA+DF+I GV L ++ K A++++ GGVGYY S F+HID G VR+W
Sbjct: 132 YHTQGKAMDFHIEGVQLANIRKAALKMRAGGVGYYPQSNFVHIDTGAVRTW 182
>gi|241206284|ref|YP_002977380.1| hypothetical protein Rleg_3595 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860174|gb|ACS57841.1| protein of unknown function DUF882 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 598
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 22 VSSPVFVGTPS--------------QAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGL 67
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN++L R+R
Sbjct: 68 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNELLRGRSRN 127
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 128 SGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 187
Query: 200 T 200
Sbjct: 188 P 188
>gi|307131495|ref|YP_003883511.1| hypothetical protein Dda3937_03654 [Dickeya dadantii 3937]
gi|306529024|gb|ADM98954.1| conserved protein [Dickeya dadantii 3937]
Length = 182
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + S L R L + ++TG + V F G +YN++ LS+LN
Sbjct: 12 LALGGAALGIALLPGQSLASLSTARPRILTLNNINTGERLKVEFFDGRRYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DP LFD L+ +Q + + ++SGYR+ TN+ L ++ +A++S
Sbjct: 72 FFRDYRANKVKTIDPALFDQLYRLQVMLGSTKPVQLISGYRSYSTNEDLRSHSKGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H GKA+DF+I G+ L ++ K A++++ GGVGYY S F+HID G +R+W
Sbjct: 132 YHTQGKAMDFHIEGIQLANIRKAAMKMRAGGVGYYPQSNFVHIDTGAIRTW 182
>gi|299132063|ref|ZP_07025258.1| protein of unknown function DUF882 [Afipia sp. 1NLS2]
gi|298592200|gb|EFI52400.1| protein of unknown function DUF882 [Afipia sp. 1NLS2]
Length = 499
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 6/170 (3%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
++ + D + RTL + + VTFKR +Y+ + L +LN L DW
Sbjct: 1 MLLLFAGAGAVHDATASNDTRTLSFHHTHSSEDLTVTFKRNGRYDADALKKLNHFLRDWR 60
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQHVL 154
S+ S MDP LFD LWE+ + + I I+S YR+ +TN ML RR+ +AR SQH+L
Sbjct: 61 SQDSTTMDPHLFDILWEVTRDVDAKQPIQIISAYRSPKTNAMLRRRSAHSGVARFSQHML 120
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
G A+DF+IPGV L + +RL+RGGVG+Y S F+H+D G +R W
Sbjct: 121 GHAMDFFIPGVPLEKIRFAGLRLQRGGVGFYPTSGSPFVHLDTGNIRHWP 170
>gi|300722553|ref|YP_003711843.1| hypothetical protein XNC1_1582 [Xenorhabdus nematophila ATCC 19061]
gi|297629060|emb|CBJ89645.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus nematophila ATCC 19061]
Length = 182
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 7/173 (4%)
Query: 29 PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQL 88
+L L+ H ++++ R L+ + TG F G +YN+ LS+L
Sbjct: 15 GAVALGLTLLPQHALAALT-----TPRPRILRFDNLHTGETLKAEFFDGRRYNKAELSRL 69
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
N L D+ + +DP+LFD ++ +Q + + + ++SGYR+ TN ML + + +A+
Sbjct: 70 NYLFRDFRQNKIKTIDPRLFDQIYLLQMMMGINKPVQLVSGYRSLTTNNMLRQASGGVAK 129
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H GKA+DF+I G+ L + K A++++ GGVG+Y S F+HID G VR+W
Sbjct: 130 HSYHTRGKAMDFHIDGIQLAHVRKAALKMRSGGVGFYPKSNFIHIDTGPVRTW 182
>gi|308186272|ref|YP_003930403.1| hypothetical protein Pvag_0752 [Pantoea vagans C9-1]
gi|308056782|gb|ADO08954.1| Uncharacterized protein ycbK [Pantoea vagans C9-1]
Length = 182
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
L R L + + TG F G Y+++ LS+LN D+ + + +DP LFD
Sbjct: 32 LSTSRPRVLMLNNLHTGETLKTEFFNGKSYDKDELSRLNHFFRDYRANKVKSIDPHLFDQ 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++ +Q + + I ++SGYR+ TN ML +A+ S H G+A+DF+I G+SL ++
Sbjct: 92 IFRLQALLGMRKPIQLVSGYRSLATNNMLRESGPGVAKHSYHTKGQAMDFHIEGISLANV 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ L+ GGVGYY S F+HID G +R W
Sbjct: 152 RKAALSLRAGGVGYYPRSNFVHIDTGPIRHW 182
>gi|161620172|ref|YP_001594058.1| angiomotin [Brucella canis ATCC 23365]
gi|161336983|gb|ABX63287.1| Angiomotin [Brucella canis ATCC 23365]
Length = 637
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|23499850|ref|NP_699290.1| hypothetical protein BRA0083 [Brucella suis 1330]
gi|225685949|ref|YP_002733921.1| hypothetical protein BMEA_B0087 [Brucella melitensis ATCC 23457]
gi|254695231|ref|ZP_05157059.1| hypothetical protein Babob3T_11403 [Brucella abortus bv. 3 str.
Tulya]
gi|256112008|ref|ZP_05452953.1| hypothetical protein Bmelb3E_04980 [Brucella melitensis bv. 3 str.
Ether]
gi|265993454|ref|ZP_06106011.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|23463421|gb|AAN33295.1| conserved hypothetical protein [Brucella suis 1330]
gi|225642054|gb|ACO01967.1| protein of unknown function DUF882 [Brucella melitensis ATCC 23457]
gi|262764324|gb|EEZ10356.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 637
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|62317042|ref|YP_222895.1| hypothetical protein BruAb2_0083 [Brucella abortus bv. 1 str.
9-941]
gi|83269036|ref|YP_418327.1| ATP/GTP-binding motif-containing protein [Brucella melitensis
biovar Abortus 2308]
gi|62197235|gb|AAX75534.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939310|emb|CAJ12248.1| ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar
Abortus 2308]
Length = 637
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|209884230|ref|YP_002288087.1| ATP/GTP-binding site motif A [Oligotropha carboxidovorans OM5]
gi|209872426|gb|ACI92222.1| ATP/GTP-binding site motif A [Oligotropha carboxidovorans OM5]
Length = 519
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Query: 35 PDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYD 94
+ + + D + RTL + +G VTFKR +Y+ + L +LN L D
Sbjct: 4 AATLLLFAGAGVVHDATASNDTRTLSFHHTHSGEDLTVTFKRNGRYDSDALKKLNHFLRD 63
Query: 95 WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN--RKIARKSQH 152
W S+ S M+P LFD LWE+ + + I I+S YR+ +TN ML RR+ +AR SQH
Sbjct: 64 WRSQDSTTMNPHLFDILWEVYRDVDGKQPIQIISAYRSPKTNAMLRRRSAHSGVARFSQH 123
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+LG A+DF+IPGV L + +RL+RGGVG+Y S F+H+D G VR W
Sbjct: 124 MLGHAMDFFIPGVPLEKIRFAGLRLQRGGVGFYPSSGSPFVHLDTGSVRHWP 175
>gi|290473859|ref|YP_003466733.1| hypothetical protein XBJ1_0798 [Xenorhabdus bovienii SS-2004]
gi|289173166|emb|CBJ79939.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 182
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 97/173 (56%), Gaps = 7/173 (4%)
Query: 29 PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQL 88
+L L+ H ++++ R L+ + TG F G +YN+ L++L
Sbjct: 15 GAAALGLSLLPQHALAALT-----TPRPRILRFDNLHTGETLKAEFFDGRRYNKSELARL 69
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
N L D+ + +DP+LFD ++ +Q + + + ++SGYR+ TN ML + + +A+
Sbjct: 70 NYLFRDYRQNKIKSIDPKLFDQIYLLQMMIGINKPVQLVSGYRSLTTNNMLRQASGGVAK 129
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+S H G+A+DF+I V L + K A++++ GGVG+Y S F+HID G VR+W
Sbjct: 130 RSYHTRGQAMDFHIDSVQLAHIRKAALKMRAGGVGFYPKSNFIHIDTGPVRTW 182
>gi|17988354|ref|NP_540987.1| hypothetical protein BMEII0010 [Brucella melitensis bv. 1 str. 16M]
gi|256043008|ref|ZP_05445954.1| hypothetical protein Bmelb1R_00920 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265989446|ref|ZP_06102003.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17984130|gb|AAL53251.1| hypothetical membrane associated protein [Brucella melitensis bv. 1
str. 16M]
gi|263000115|gb|EEZ12805.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 637
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|84393106|ref|ZP_00991871.1| hypothetical protein V12B01_23579 [Vibrio splendidus 12B01]
gi|84376263|gb|EAP93146.1| hypothetical protein V12B01_23579 [Vibrio splendidus 12B01]
Length = 182
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Query: 23 SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQ 82
S F + + + + ++ RT+ + + TG + + G+ Y
Sbjct: 4 SLFSRRQFLTYAGGTAVVASITPSIAFASYPDQPRTISMNNLHTGERLETCYFDGTNYVG 63
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ +++L++L D+ + MD LFD + +IQ + + + I+SGYR+ TN+ L +
Sbjct: 64 DEMARLSKLCRDFRRNEIHPMDKNLFDQITQIQNVLGIQKEVQIISGYRSPATNEALRSK 123
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ +A+KS H+LGKA+DF I GV+L+ L +A L GGVGYY S F+HID G VRSW
Sbjct: 124 SSGVAKKSYHMLGKAIDFRIDGVNLKELRDVAKSLNAGGVGYYARSNFIHIDTGPVRSW 182
>gi|218682462|ref|ZP_03530063.1| hypothetical protein RetlC8_26840 [Rhizobium etli CIAT 894]
Length = 460
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 113/181 (62%), Gaps = 20/181 (11%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 39 VSSPVFVSTPS--------------QAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGL 84
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 85 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSKDYINVVCGFRSPGTNEMLRGRSRN 144
Query: 145 -KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSW 199
+A KSQH+LGKA+DF+IP V L +L I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 145 SGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAW 204
Query: 200 T 200
Sbjct: 205 P 205
>gi|163844282|ref|YP_001621937.1| hypothetical protein BSUIS_B0088 [Brucella suis ATCC 23445]
gi|163675005|gb|ABY39115.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 637
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|86358784|ref|YP_470676.1| hypothetical protein RHE_CH03184 [Rhizobium etli CFN 42]
gi|86282886|gb|ABC91949.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 454
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 9 ILKVIWIGLYVSV---ASFFVTSPIYSLSPDLIK--YHQQSSMSSDLLDQEEVRTLKIYV 63
+LK GL + ++ + ++ + + + S L E R LK++
Sbjct: 1 MLKYSLQGLSGGALRGIATLLSRAKRLAAQTILPALFALPALVGSASLASAEDRALKLFF 60
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY 123
TG +A +T+KR +++ GL+Q+NR L DW + MDP+L D +WE+ Q +Y
Sbjct: 61 THTGERATITYKRDGKFDSRGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYQRSGGKDY 120
Query: 124 IYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGG 181
I+++S YR+ TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L IA++++ GG
Sbjct: 121 IHVVSAYRSPATNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRAIAMQMQVGG 180
Query: 182 VGYY----SKFLHIDVGRVRSWT 200
VGYY S F+H+DVG VR+W
Sbjct: 181 VGYYPTSGSPFVHLDVGNVRAWP 203
>gi|254500787|ref|ZP_05112938.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436858|gb|EEE43537.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 575
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 68/152 (44%), Positives = 97/152 (63%), Gaps = 4/152 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
Q E RTLK+Y T + +TFK+ +Y GL + NR L DW + +DP+L D +W
Sbjct: 14 QAETRTLKLYNTHTKERVSITFKKNGRYIPSGLREANRFLRDWRRNEITKIDPELLDLVW 73
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
E+ Q +YI+++S YR+ TN ML +R++ +AR SQH LGKA+DF+IPGV++R L +
Sbjct: 74 EVYQKVRAGDYIHVVSSYRSPATNNMLRKRSKGVARNSQHTLGKAMDFFIPGVNIRKLRE 133
Query: 173 IAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+R + GGVGYY S F+H+D G VR W
Sbjct: 134 TGLRKQVGGVGYYPRSGSPFVHLDTGSVRHWP 165
>gi|329298735|ref|ZP_08256071.1| hypothetical protein Pstas_23589 [Plautia stali symbiont]
Length = 183
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + R L + + TG F G Y+++ L++LN D+ + Q +D
Sbjct: 26 GAALASVSTSRPRVLTLSNMHTGETLKTEFFNGKSYDKDELARLNHFFRDYRANQVKHID 85
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P LFD L+ +Q + + + ++SGYRT TN ML +A+ S H+ G+A+DF+I G
Sbjct: 86 PHLFDQLYRLQTLLNTRKPVQLISGYRTLATNNMLRESGPGVAKHSYHIKGQAMDFHIEG 145
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+SL ++ K A+ ++ GG+GYY S F+HID G R W+
Sbjct: 146 ISLSNVRKAALSMRAGGIGYYPRSNFVHIDTGPARHWS 183
>gi|258620189|ref|ZP_05715228.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624451|ref|ZP_05719398.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258583298|gb|EEW08100.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258587547|gb|EEW12257.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 182
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
L+ + + + + R L + + TG + G Y + L +LN
Sbjct: 9 LKLTAGGLILAACTPSIAFASYAAKPRELALSNLHTGESIETRYFNGKDYVRSELKRLNH 68
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + MD LFD L +IQQ ++I+SGYR+ TNK L +++ +A+KS
Sbjct: 69 LCRDFRRDEVHAMDRVLFDQLCQIQQLLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKS 128
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H+ G+A+DF + GVSL+ + + AI L+ GGVGYY K F+HID G VR W
Sbjct: 129 YHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSRFIHIDTGPVRQW 179
>gi|332716496|ref|YP_004443962.1| hypothetical protein AGROH133_12131 [Agrobacterium sp. H13-3]
gi|325063181|gb|ADY66871.1| hypothetical protein AGROH133_12131 [Agrobacterium sp. H13-3]
Length = 624
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 123/197 (62%), Gaps = 10/197 (5%)
Query: 8 RILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTG 67
+I + + + +++ VT L+ + + S+ + E R+LK+Y + T
Sbjct: 13 KIARGLIKDICTKLSARAVTFACLMLAA--MPFAGVSATEAFA----ETRSLKLYYIHTR 66
Query: 68 SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL 127
KA++TFKR +Y+Q+GL +LNR L DW Q MDP+LFD +WE+ + +YI ++
Sbjct: 67 EKAVITFKRNGKYDQKGLQELNRFLRDWRRNQPTRMDPRLFDLVWEVYRRSGATDYINVV 126
Query: 128 SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-- 185
S +R+ ETN +L R + +A KSQH+LGKA+DFYIPGV L +L +I ++++ GGVG+Y
Sbjct: 127 SAFRSPETNGLLRTRTKGVAEKSQHMLGKAMDFYIPGVKLSTLREIGMQMQIGGVGFYPT 186
Query: 186 --SKFLHIDVGRVRSWT 200
S F+H+DVG VR+W
Sbjct: 187 SGSPFVHMDVGGVRAWP 203
>gi|293396753|ref|ZP_06641029.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421017|gb|EFE94270.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 182
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + + TG F G YN+E L++LN
Sbjct: 12 LTLGTAAMGIALLPGQAFASLSTSRPRILVVNNLHTGESLKAEFFDGKGYNKEELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +DP+LFD L+ +Q + + ++SGYR+ TN L +R +A+ S
Sbjct: 72 LFRDYRANKVKSIDPRLFDHLYRLQGLLGTSKPVQLVSGYRSLGTNNELRSHSRGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H G+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 YHTKGQAMDFHIEGIQLSNIRKAALKMRAGGVGYYPRSNFVHIDTGPARTW 182
>gi|260467507|ref|ZP_05813675.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
gi|259028734|gb|EEW30042.1| protein of unknown function DUF882 [Mesorhizobium opportunistum
WSM2075]
Length = 499
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 66/151 (43%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R+LKI + TG KA + FKR +Y+Q GL ++N +L DW + MDP+L D +W+
Sbjct: 18 AETRSLKIQHLHTGEKAEIVFKRNGRYDQAGLKKINVMLRDWRRNEPTRMDPRLLDLVWQ 77
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ YI+I+S YR+ TN ML R++ +AR+SQH++G+A+DF++P V L+ L I
Sbjct: 78 AYRASGSTAYIHIVSAYRSPATNAMLRGRSKGVARESQHMVGRAMDFFLPDVPLKKLRDI 137
Query: 174 AIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 138 GLKMQGGGVGYYPTSGSPFIHMDVGNVRHWP 168
>gi|253990245|ref|YP_003041601.1| hypothetical protein PAU_02768 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781695|emb|CAQ84858.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 195
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 104/176 (59%), Gaps = 7/176 (3%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
++ + +L ++ +++++ L R L + TG F G +YN+E L
Sbjct: 25 LSMGMAALGLSVLPGQVLATLTTPL-----PRILHFDNLHTGETIKAEFFDGHRYNKEEL 79
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
++LN L D+ + +DP+LFD ++ +Q V + + ++SGYR+ TN L ++++
Sbjct: 80 ARLNHLFRDYRQNRVKTIDPKLFDQIYLLQMMLGVNKPVQLISGYRSLMTNNQLRKQSKG 139
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A++S H LG+A+DF+I G+ L + K A+++K GGVGYY S F+HID G VR+W
Sbjct: 140 VAKQSYHTLGRAMDFHIEGIELSRIRKAALKMKAGGVGYYPNSNFIHIDTGPVRTW 195
>gi|188582119|ref|YP_001925564.1| hypothetical protein Mpop_2874 [Methylobacterium populi BJ001]
gi|179345617|gb|ACB81029.1| protein of unknown function DUF882 [Methylobacterium populi BJ001]
Length = 502
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 4/163 (2%)
Query: 42 QQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSI 101
++ + D + + RTL + TG VTFKR +Y++ L Q+N L+ DW +S+
Sbjct: 36 AGTAETQDAIANGDTRTLSMVHQHTGESLTVTFKRDGRYDRAALDQINWLMRDWRENESV 95
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
MDP+LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF+
Sbjct: 96 KMDPRLFDVVWEAQRSVGSSAPLRIVCGYRSPKTNGMLRRRSSGVAETSQHMLGKAMDFF 155
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+ S+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 156 MTDASIDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSWP 198
>gi|319782093|ref|YP_004141569.1| hypothetical protein Mesci_2372 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167981|gb|ADV11519.1| protein of unknown function DUF882 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 551
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 65/151 (43%), Positives = 98/151 (64%), Gaps = 4/151 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R LKI + TG KA + FKR +Y+ GL ++N +L DW + MDP+L D +W+
Sbjct: 63 AETRALKIQHLHTGEKAEIVFKRNGRYDPAGLKKINLMLRDWRRNEPTKMDPRLLDLVWQ 122
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ YI+++S YR+ TN ML R++ +AR+SQH++G+A+DF++P VSL+ L I
Sbjct: 123 AYRASGSTAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVSLKKLRDI 182
Query: 174 AIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 183 GLKMQGGGVGYYPTSGSPFIHMDVGNVRHWP 213
>gi|15641282|ref|NP_230914.1| hypothetical protein VC1269 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121729967|ref|ZP_01682386.1| lipoprotein, putative [Vibrio cholerae V52]
gi|147673878|ref|YP_001216834.1| putative lipoprotein [Vibrio cholerae O395]
gi|153212294|ref|ZP_01948082.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|153801331|ref|ZP_01955917.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|153823869|ref|ZP_01976536.1| lipoprotein, putative [Vibrio cholerae B33]
gi|153827564|ref|ZP_01980231.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|153829584|ref|ZP_01982251.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|227081441|ref|YP_002809992.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|229505144|ref|ZP_04394654.1| hypothetical protein VCF_000352 [Vibrio cholerae BX 330286]
gi|229511184|ref|ZP_04400663.1| hypothetical protein VCE_002591 [Vibrio cholerae B33]
gi|229515644|ref|ZP_04405103.1| hypothetical protein VCB_003302 [Vibrio cholerae TMA 21]
gi|229518303|ref|ZP_04407747.1| hypothetical protein VCC_002327 [Vibrio cholerae RC9]
gi|229525868|ref|ZP_04415273.1| hypothetical protein VCA_003513 [Vibrio cholerae bv. albensis
VL426]
gi|229529650|ref|ZP_04419040.1| hypothetical protein VCG_002745 [Vibrio cholerae 12129(1)]
gi|229608164|ref|YP_002878812.1| hypothetical protein VCD_003082 [Vibrio cholerae MJ-1236]
gi|254226413|ref|ZP_04920000.1| lipoprotein, putative [Vibrio cholerae V51]
gi|254848393|ref|ZP_05237743.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745665|ref|ZP_05419613.1| hypothetical protein VCH_002024 [Vibrio cholera CIRS 101]
gi|262159058|ref|ZP_06030170.1| hypothetical protein VIG_002299 [Vibrio cholerae INDRE 91/1]
gi|262169417|ref|ZP_06037109.1| hypothetical protein VIJ_002643 [Vibrio cholerae RC27]
gi|297578861|ref|ZP_06940789.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498639|ref|ZP_07008446.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9655754|gb|AAF94428.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121628288|gb|EAX60799.1| lipoprotein, putative [Vibrio cholerae V52]
gi|124116672|gb|EAY35492.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|124123156|gb|EAY41899.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|125621035|gb|EAZ49382.1| lipoprotein, putative [Vibrio cholerae V51]
gi|126518611|gb|EAZ75834.1| lipoprotein, putative [Vibrio cholerae B33]
gi|146315761|gb|ABQ20300.1| putative lipoprotein [Vibrio cholerae O395]
gi|148874918|gb|EDL73053.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|149738463|gb|EDM52859.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|227009329|gb|ACP05541.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|227013186|gb|ACP09396.1| putative lipoprotein [Vibrio cholerae O395]
gi|229333424|gb|EEN98910.1| hypothetical protein VCG_002745 [Vibrio cholerae 12129(1)]
gi|229339449|gb|EEO04466.1| hypothetical protein VCA_003513 [Vibrio cholerae bv. albensis
VL426]
gi|229345018|gb|EEO09992.1| hypothetical protein VCC_002327 [Vibrio cholerae RC9]
gi|229347413|gb|EEO12373.1| hypothetical protein VCB_003302 [Vibrio cholerae TMA 21]
gi|229351149|gb|EEO16090.1| hypothetical protein VCE_002591 [Vibrio cholerae B33]
gi|229357367|gb|EEO22284.1| hypothetical protein VCF_000352 [Vibrio cholerae BX 330286]
gi|229370819|gb|ACQ61242.1| hypothetical protein VCD_003082 [Vibrio cholerae MJ-1236]
gi|254844098|gb|EET22512.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255736740|gb|EET92137.1| hypothetical protein VCH_002024 [Vibrio cholera CIRS 101]
gi|262022230|gb|EEY40939.1| hypothetical protein VIJ_002643 [Vibrio cholerae RC27]
gi|262029243|gb|EEY47895.1| hypothetical protein VIG_002299 [Vibrio cholerae INDRE 91/1]
gi|297536455|gb|EFH75288.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542972|gb|EFH79022.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327483957|gb|AEA78364.1| exported protein [Vibrio cholerae LMA3894-4]
Length = 182
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
L+ + + + + R L + + TG + G Y + L +LN
Sbjct: 9 LKLTAGGLILAACTPSIAFASYAAKPRELALSNLHTGESIETRYFNGKNYVRSELKRLNH 68
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + MD LFD L +IQ ++I+SGYR+ TNK L +++ +A+KS
Sbjct: 69 LCRDFRRDEVHAMDKLLFDQLCQIQLLLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKS 128
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+ G+A+DF + GVSL+ + + AI L+ GGVGYY S+F+HID G VR W
Sbjct: 129 YHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSQFIHIDTGPVRQW 179
>gi|218709905|ref|YP_002417526.1| hypothetical protein VS_1918 [Vibrio splendidus LGP32]
gi|218322924|emb|CAV19101.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 206
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 23 SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQ 82
S F + + + + ++ RT+ + + TG + + G+ Y
Sbjct: 28 SLFSRRQFLTYAGGTAVVASITPSIAFASYPDQPRTISMNNLHTGERLETCYFDGANYVG 87
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ +++L++L D+ + MD LFD + +IQ + + + I+SGYR+ TN+ L +
Sbjct: 88 DEMARLSKLCRDFRRNEIHPMDKNLFDQITQIQNVLGIQKEVQIISGYRSPATNEALRSK 147
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ +A+KS H+LGKA+DF I GV+L+ L +A L GGVGYY S F+HID G RSW
Sbjct: 148 SSGVAKKSYHMLGKAIDFRIDGVNLKELRDVAKSLNAGGVGYYARSNFIHIDTGPARSW 206
>gi|163758857|ref|ZP_02165944.1| hypothetical protein HPDFL43_15577 [Hoeflea phototrophica DFL-43]
gi|162284147|gb|EDQ34431.1| hypothetical protein HPDFL43_15577 [Hoeflea phototrophica DFL-43]
Length = 633
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
+ +++ E R+LK+Y + T +A + FKR +Y+Q GL++LNR L DW +
Sbjct: 77 SAGLTATSSASAETRSLKLYYIHTKERAEIVFKRNGRYDQAGLNKLNRFLRDWRRNEPTK 136
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MDP+LFD +WE+ + + +YI+++S YR+ TN ML R A KSQH+LGKA+DFYI
Sbjct: 137 MDPRLFDLVWEVYRQANARDYIHVVSAYRSPATNAMLRRTRGGQATKSQHMLGKAIDFYI 196
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
PGV + L +I ++L+ GGVGYY S F+H+DV VR+W
Sbjct: 197 PGVKVSKLREIGMKLQGGGVGYYPKSGSPFVHLDVAGVRAWP 238
>gi|254291720|ref|ZP_04962507.1| lipoprotein, putative [Vibrio cholerae AM-19226]
gi|150422404|gb|EDN14364.1| lipoprotein, putative [Vibrio cholerae AM-19226]
Length = 182
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
L+ + + + + R L + + TG + G Y + L +LN
Sbjct: 9 LKLTASGLILAACTPSIAFASYAAKPRELALSNLHTGESIETRYFNGKNYVRSELKRLNH 68
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + MD LFD L +IQ ++I+SGYR+ TNK L +++ +A+KS
Sbjct: 69 LCRDFRRDEVHAMDKLLFDQLCQIQLLLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKS 128
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+ G+A+DF + GVSL+ + + AI L+ GGVGYY S+F+HID G VR W
Sbjct: 129 YHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSQFIHIDTGPVRQW 179
>gi|240139502|ref|YP_002963977.1| hypothetical protein MexAM1_META1p2948 [Methylobacterium extorquens
AM1]
gi|240009474|gb|ACS40700.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 496
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + + + D + + R+L + TG VTFKR +Y++ L Q+N L
Sbjct: 26 AAGAMAVLLVASTVETQDAIANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWL 85
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+ DW +SI MDP+LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQ
Sbjct: 86 MRDWRENESIKMDPRLFDVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQ 145
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
H+LGKA+DF++ S+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 146 HMLGKAMDFFMTDASIDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSWP 198
>gi|86148446|ref|ZP_01066736.1| hypothetical protein MED222_11803 [Vibrio sp. MED222]
gi|85833743|gb|EAQ51911.1| hypothetical protein MED222_11803 [Vibrio sp. MED222]
Length = 182
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 23 SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQ 82
S F + + + + ++ RT+ + + TG + + G+ Y
Sbjct: 4 SLFSRRQFLTYAGGTAVVASITPSIAFASYPDQPRTISMNNLHTGERLETCYFDGTNYVG 63
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ +++L++L D+ + MD LFD + +IQ + + + I+SGYR+ TN+ L +
Sbjct: 64 DEMARLSKLCRDFRRNEIHPMDKNLFDQITQIQNVLGIQKEVQIISGYRSPATNEALRSK 123
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ +A+KS H+LGKA+DF I GV+L+ L +A L GGVGYY S F+HID G RSW
Sbjct: 124 SSGVAKKSYHMLGKAIDFRIDGVNLKELRDVAKSLNAGGVGYYARSNFIHIDTGPARSW 182
>gi|154246010|ref|YP_001416968.1| hypothetical protein Xaut_2067 [Xanthobacter autotrophicus Py2]
gi|154160095|gb|ABS67311.1| protein of unknown function DUF882 [Xanthobacter autotrophicus Py2]
Length = 502
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+++ +S + + + RT+ ++ +G TFK+ +Y+ E L+QLN
Sbjct: 28 AVAIGSSLLIAGTSSLQNAVANGDTRTITLHHTHSGESGSFTFKKNGRYDAEVLAQLNHF 87
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
L DW +++S MDP LFD +WE+ + I I+S YR+ ETN ML R+ +A+ SQ
Sbjct: 88 LRDWRNQKSTQMDPGLFDIVWEVYRETDATAPIQIVSSYRSPETNSMLRARSSGVAKFSQ 147
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
H+LG+A+DFYIPGV+L L +RL+RGGVG+Y S F+H+D G VR W
Sbjct: 148 HMLGRAMDFYIPGVNLTDLRVAGLRLQRGGVGFYPTSGSPFVHMDTGNVRHWP 200
>gi|159185889|ref|NP_356859.2| hypothetical protein Atu3763 [Agrobacterium tumefaciens str. C58]
gi|159141023|gb|AAK89644.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 587
Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 73/153 (47%), Positives = 106/153 (69%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y + T KA++TFKR +Y+Q+GL +LNR L DW Q MDP+LFD +
Sbjct: 15 AAAETRSLKLYYIHTREKAVITFKRNGKYDQKGLQELNRFLRDWRRNQPTRMDPRLFDLV 74
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
WE+ + +YI ++S +R+ ETN +L R + +A KSQH+LGKA+DFYIPGV L +L
Sbjct: 75 WEVYRRSGATDYINVVSAFRSPETNGLLRTRTKGVAEKSQHMLGKAMDFYIPGVKLATLR 134
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 135 EIGMQMQIGGVGFYPTSGSPFVHMDVGGVRAWP 167
>gi|13475429|ref|NP_106993.1| hypothetical protein mlr6494 [Mesorhizobium loti MAFF303099]
gi|14026181|dbj|BAB52779.1| mlr6494 [Mesorhizobium loti MAFF303099]
Length = 523
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 98/151 (64%), Gaps = 4/151 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E R LKI + TG KA + FKR +Y+Q GL +++ +L DW + MDP+L D +W+
Sbjct: 18 AETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWRRNEPTRMDPRLLDLVWQ 77
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ YI+++S YR+ TN ML R++ +AR+SQH++G+A+DF++P V L+ L I
Sbjct: 78 AYRASGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVPLKKLRDI 137
Query: 174 AIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
++++ GGVGYY S F+H+DVG VR W
Sbjct: 138 GLKMQGGGVGYYPTSGSPFIHMDVGNVRHWP 168
>gi|222149714|ref|YP_002550671.1| hypothetical protein Avi_3698 [Agrobacterium vitis S4]
gi|221736696|gb|ACM37659.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 497
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + ++ E R+LKI V TG K +TFKR +Y+ +GL QLN ++ DW
Sbjct: 1 MTIAFSALYATTGSAAAETRSLKILFVHTGEKQEITFKRNGRYDPKGLQQLNNIVRDWRR 60
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
++ MDP+LFD +W + Q YIY++SGYR+ TN ML R+ +A++SQH+ G A
Sbjct: 61 NEATKMDPRLFDLVWSVYQKAGASGYIYVVSGYRSPATNAMLRSRSSGVAKESQHMNGTA 120
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSWT 200
+DF+IPGV L+SL I ++ + GGVGYY F+H+DV VRSW
Sbjct: 121 MDFFIPGVPLKSLRDIGMKFQAGGVGYYPNSGSPFVHMDVAGVRSWP 167
>gi|37525683|ref|NP_929027.1| hypothetical protein plu1748 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785111|emb|CAE14041.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 182
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 101/176 (57%), Gaps = 7/176 (3%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
+++ +L L+ H ++ L R L+ + TG F G +YN+E L
Sbjct: 12 LSAGAAALGLSLLPGHTFAT-----LATPRPRILRFDNLHTGETIKAEFFDGYRYNKEEL 66
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
++L+ L D+ +DP+LFD ++ +Q + + + ++SGYR+ TN L ++++
Sbjct: 67 ARLDHLFRDYRQNSVKTIDPKLFDQIYLLQMMIEINKPVQLISGYRSLVTNNQLRKQSKG 126
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A++S H G+A+DF+I G+ L + K A+++K GGVGYY S F+HID G VR+W
Sbjct: 127 VAKQSYHTRGRAMDFHIEGIELSRICKAALKMKAGGVGYYPHSNFVHIDTGPVRTW 182
>gi|254561916|ref|YP_003069011.1| hypothetical protein METDI3517 [Methylobacterium extorquens DM4]
gi|254269194|emb|CAX25160.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 496
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + + + D + + R+L + TG VTFKR +Y++ L Q+N L
Sbjct: 26 AAGAMAVLLVAGTVETQDAIANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWL 85
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+ DW +SI MDP+LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQ
Sbjct: 86 MRDWRENESIKMDPRLFDVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQ 145
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
H+LGKA+DF++ S+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 146 HMLGKAMDFFMTDASIDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSWP 198
>gi|262171697|ref|ZP_06039375.1| hypothetical protein VII_002520 [Vibrio mimicus MB-451]
gi|261892773|gb|EEY38759.1| hypothetical protein VII_002520 [Vibrio mimicus MB-451]
Length = 182
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
L+ + + + + R L + + TG + G Y + L +LN
Sbjct: 9 LKLTAGGLILAACTPSIAFASYAAKPRELALSNLHTGESIETRYFNGKDYVRSELKRLNH 68
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + MD LFD L +IQQ ++I+SGYR+ TNK L +++ +A+KS
Sbjct: 69 LCRDFRRDEVHAMDRVLFDHLCQIQQLLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKS 128
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H+ G+A+DF + GVSL+ + + AI L+ GGVGYY K F+HID G VR W
Sbjct: 129 YHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSRFIHIDTGPVRQW 179
>gi|284007573|emb|CBA73121.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 184
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 7/173 (4%)
Query: 29 PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQL 88
+L L+ H ++++ + L+ + TG F G +YN L++L
Sbjct: 17 GAITLGFSLLPSHAFAALT-----TPRPKILRFENLHTGEFLKTEFFDGRRYNNAELTRL 71
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
N L D + + +DP+LFD ++ +Q + + ++SGYR+ ETN L R++ +A+
Sbjct: 72 NHLFRDHRNNKIKTIDPKLFDQIYLLQMLMGTNKPVQLVSGYRSVETNNALRRKSSGVAK 131
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF+I G+ L + K A++++ GGVGYY S F+HID G VR W
Sbjct: 132 NSYHTHGRAMDFHIKGIELSHIRKAALKMRAGGVGYYPNSNFVHIDTGPVRKW 184
>gi|197335748|ref|YP_002155959.1| twin-arginine translocation pathway signal [Vibrio fischeri MJ11]
gi|197317238|gb|ACH66685.1| twin-arginine translocation pathway signal [Vibrio fischeri MJ11]
Length = 183
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + L + S S E R L + + TG + + G QY L +LN L
Sbjct: 16 AATAGLSLFPSFSFASQFA---ETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHL 72
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN-RKIARKS 150
D+ +SI+MD +LFD L IQ + I+SGYR+ TN+ML ++ +A+KS
Sbjct: 73 CRDFRRNESIEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKS 132
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+LGKA+DF + GV L + K A+ LK GGVGYY S F+HID GRVR W
Sbjct: 133 LHMLGKAMDFRLEGVPLAEIRKAALSLKAGGVGYYPGSNFVHIDTGRVRFW 183
>gi|320156748|ref|YP_004189127.1| hypothetical protein VVM_03484 [Vibrio vulnificus MO6-24/O]
gi|319932060|gb|ADV86924.1| exported protein [Vibrio vulnificus MO6-24/O]
Length = 169
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L+ ++ ++ RTL + + TG + GS Y E L++++++
Sbjct: 3 GGGLLLASAMPKLAMASY-PDQPRTLALNNLHTGELLETCYFDGSTYLIEELARIDKICR 61
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + MD +LFD L +IQ+ + I+SGYR+ +TN L ++ +A+KS H+
Sbjct: 62 DFRQNEVHPMDRRLFDHLTQIQKLIGTENEVQIISGYRSPQTNAALRAKSSGVAKKSYHM 121
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
LG+A+DF + GV L ++ A+ L+ GGVGYY S F+HID G VRSW
Sbjct: 122 LGRAIDFRLDGVKLSTVRDAALSLEAGGVGYYPGSNFVHIDTGPVRSW 169
>gi|242239071|ref|YP_002987252.1| hypothetical protein Dd703_1633 [Dickeya dadantii Ech703]
gi|242131128|gb|ACS85430.1| protein of unknown function DUF882 [Dickeya dadantii Ech703]
Length = 182
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + S L R L + ++TG F G +YN++ L++LN
Sbjct: 12 LALGGAALGIALLPDQSLASLSTSRPRMLTLNNLNTGEHLKAEFFDGRRYNKDELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + +DP+LF+ L+ +Q + ++SGYR+ TN+ L ++ +A++S
Sbjct: 72 FFRDYRANKIKTIDPKLFEQLYRLQVMLGTQRPVQLISGYRSHNTNEDLRASSKGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H GKAVDF+I GV L ++ K A++L GGVGYY S F+HID G R+W
Sbjct: 132 YHTQGKAVDFHIEGVQLANIRKAALKLGAGGVGYYPQSNFVHIDTGPARTW 182
>gi|59711765|ref|YP_204541.1| hypothetical protein VF_1158 [Vibrio fischeri ES114]
gi|59479866|gb|AAW85653.1| conserved protein [Vibrio fischeri ES114]
Length = 183
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + L + S S E R L + + TG + + G QY L +LN L
Sbjct: 16 AATAGLSLFPSFSFASQFA---ETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHL 72
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN-RKIARKS 150
D+ +SI+MD +LFD L IQ + I+SGYR+ TN+ML ++ +A+KS
Sbjct: 73 CRDFRRNESIEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKS 132
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+LGKA+DF + GV L + K A+ LK GGVGYY S F+HID GRVR W
Sbjct: 133 LHMLGKAMDFRLEGVPLAEVRKAALSLKAGGVGYYPGSNFVHIDTGRVRFW 183
>gi|229521382|ref|ZP_04410801.1| hypothetical protein VIF_001912 [Vibrio cholerae TM 11079-80]
gi|229341480|gb|EEO06483.1| hypothetical protein VIF_001912 [Vibrio cholerae TM 11079-80]
Length = 182
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
L+ + + + + R L + + TG + G Y + L +LN
Sbjct: 9 LKLTAGGLILAACTPSIAFASYAAKPRELALSNLHTGESIETRYFNGKNYVRSELKRLNH 68
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + MD LFD L +IQ ++I+SGYR+ TNK L +++ +A+KS
Sbjct: 69 LCRDFRRDEVHAMDKLLFDQLCQIQLLLGTQAEVHIVSGYRSPMTNKQLRSKSKGVAKKS 128
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+ G+A+DF + GVSL+ + + AI L+ GGVGYY S+F+HID G VR W
Sbjct: 129 YHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSQFIHIDTGPVRQW 179
>gi|90418905|ref|ZP_01226816.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336985|gb|EAS50690.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 593
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+ + E R LK Y + T KA ++K +YN L +LN + DW + ++MDP+
Sbjct: 57 GTVTAAKAETRVLKFYNLHTHEKASFSYKSNGRYNGSELKKLNWFMRDWRKSKQVEMDPR 116
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L D +WE + YI ++ GYR+ TN ML R+ +A++SQH LGKA+DFYIP V
Sbjct: 117 LLDLIWEAYRQSGSSAYINVICGYRSPATNSMLRSRSSGVAKQSQHTLGKALDFYIPDVP 176
Query: 167 LRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
L L +I ++++ GGVGYY S F+H DVG R W
Sbjct: 177 LAKLREIGLKMQVGGVGYYPKSGSPFVHFDVGNARHWP 214
>gi|163852170|ref|YP_001640213.1| hypothetical protein Mext_2751 [Methylobacterium extorquens PA1]
gi|163663775|gb|ABY31142.1| protein of unknown function DUF882 [Methylobacterium extorquens
PA1]
Length = 496
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRL 91
+ + + D + + R+L + TG VTFKR +Y++ L Q+N L
Sbjct: 26 AAGAMATLLVAGTVETQDAVANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWL 85
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+ DW +SI MDP+LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQ
Sbjct: 86 MRDWRENESIKMDPRLFDVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQ 145
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
H+LGKA+DF++ S+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 146 HMLGKAMDFFMTDASIDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSWP 198
>gi|260776044|ref|ZP_05884939.1| hypothetical protein VIC_001428 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607267|gb|EEX33532.1| hypothetical protein VIC_001428 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 179
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLL 92
L+ + + + ++ R L + TG + + G Y LS+++ +
Sbjct: 11 LAGSGLVVASCAPSLAFAAHPDQPRALAFNNLHTGEELESCYFDGRDYVANELSRIDNIC 70
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
D+ + +MD LFD + IQ V + I+SGYR+ TN L ++ +A+KS H
Sbjct: 71 RDFRRNEVHEMDKYLFDQISLIQSELGVEAEVQIISGYRSPATNAALRSKSSGVAKKSYH 130
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+LG+A+DF + GV+L+ + AI LK GGVGYY S F+HID G VR W
Sbjct: 131 MLGQAIDFRLDGVNLKKVRDAAIELKAGGVGYYPRSNFVHIDTGPVRHW 179
>gi|265985716|ref|ZP_06098451.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264664308|gb|EEZ34569.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 288
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 113/199 (56%), Gaps = 14/199 (7%)
Query: 8 RILKVIWIGLYVSV--ASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
+ +W G V A V++ + + ++ Q+S E R+LK+Y V
Sbjct: 9 KCFSKVWTGACSGVMRARASVSAGLAIAAVAMVVLPSQASA--------ETRSLKLYYVH 60
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +W++ Q EYI
Sbjct: 61 TGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLIWQVYQSTGSREYIT 120
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L I +R + GGVGYY
Sbjct: 121 VVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYY 180
Query: 186 ----SKFLHIDVGRVRSWT 200
S F+H+DVG VR W
Sbjct: 181 PRSGSPFVHMDVGNVRHWP 199
>gi|218530928|ref|YP_002421744.1| hypothetical protein Mchl_2978 [Methylobacterium chloromethanicum
CM4]
gi|218523231|gb|ACK83816.1| protein of unknown function DUF882 [Methylobacterium
chloromethanicum CM4]
Length = 496
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 43 QSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSID 102
+ + D + + R+L + TG VTFKR +Y++ L Q+N L+ DW +SI
Sbjct: 37 GTVETQDAVANGDTRSLSMVHEHTGETLNVTFKRDGRYDRAALDQINWLMRDWRENESIK 96
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MDP+LFD +WE Q+ + I+ GYR+ +TN ML RR+ +A SQH+LGKA+DF++
Sbjct: 97 MDPRLFDVVWEAQRSVGSTAPLRIVCGYRSPKTNGMLRRRSSGVADTSQHMLGKAMDFFM 156
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
S+ + + +R++RGGVG+Y S F+H+DVG VRSW
Sbjct: 157 TDASIDQIRAVGMRMQRGGVGWYPRSGSPFVHLDVGSVRSWP 198
>gi|75675183|ref|YP_317604.1| hypothetical protein Nwi_0990 [Nitrobacter winogradskyi Nb-255]
gi|74420053|gb|ABA04252.1| Protein of unknown function DUF882 [Nitrobacter winogradskyi
Nb-255]
Length = 529
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+ G + S ++ + + + + E RTL + + V
Sbjct: 1 MLAGFARGLKSLSISRTGSRIGLSSLLLLAGAGSVHNAAALNETRTLSFHHTHSSENLTV 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
TFKR +Y++ L QLN L DW S++ MD LFD LWE+ + + I I+S YR+
Sbjct: 61 TFKRNGRYDEGALKQLNHFLRDWRSQEQTTMDRHLFDILWEVYRDVDGRQPINIISAYRS 120
Query: 133 QETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----S 186
TN ML RR+ +AR SQH LG A+DFYIPGV L + +RL+RGGVG+Y S
Sbjct: 121 PATNAMLRRRSKNSGVARFSQHTLGHAMDFYIPGVQLEKIRFAGLRLQRGGVGFYPKSGS 180
Query: 187 KFLHIDVGRVRSWT 200
F+H+D G VR W
Sbjct: 181 PFVHLDTGHVRHWP 194
>gi|218661613|ref|ZP_03517543.1| hypothetical protein RetlI_20010 [Rhizobium etli IE4771]
Length = 209
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 13 IWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
+W G+ ++ S ++ P L +S E R LK++ TG KA +
Sbjct: 4 LWSGIA-ALLSRAKRVAAQTILPALFALPALVGSASF--ASAEDRALKLFFTHTGEKATI 60
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
T+KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+++S YR+
Sbjct: 61 TYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGRDYIHVVSAYRS 120
Query: 133 QETNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----S 186
TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L +A++++ GGVGYY S
Sbjct: 121 PATNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRAVAMQMQVGGVGYYPTSGS 180
Query: 187 KFLHIDVGRVRSWT 200
F+H+DVG VR+W
Sbjct: 181 PFVHLDVGNVRAWP 194
>gi|37680298|ref|NP_934907.1| hypothetical protein VV2114 [Vibrio vulnificus YJ016]
gi|326424106|ref|NP_761767.2| hypothetical protein VV1_2963 [Vibrio vulnificus CMCP6]
gi|37199045|dbj|BAC94878.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319999487|gb|AAO11294.2| Putative exported protein [Vibrio vulnificus CMCP6]
Length = 186
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L+ ++ ++ RTL + + TG + GS Y E L++++++
Sbjct: 20 GGGLLLASAMPKLAMASY-PDQPRTLALNNLHTGELLETCYFDGSTYLIEELARIDKICR 78
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + MD +LFD L +IQ+ + I+SGYR+ +TN L ++ +A+KS H+
Sbjct: 79 DFRQNEVHPMDRRLFDHLTQIQKLIGTENEVQIISGYRSPQTNAALRAKSSGVAKKSYHM 138
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
LG+A+DF + GV L ++ A+ L+ GGVGYY S F+HID G VRSW
Sbjct: 139 LGRAIDFRLDGVKLSTVRDAALSLEAGGVGYYPGSNFVHIDTGPVRSW 186
>gi|300716097|ref|YP_003740900.1| hypothetical protein EbC_15180 [Erwinia billingiae Eb661]
gi|299061933|emb|CAX59049.1| Putative exported protein [Erwinia billingiae Eb661]
Length = 182
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G Y+++ LS+LN
Sbjct: 12 LTLGGAALGCALLPRQAFASLSTSRPRVLTLNNLNTGETLKTEFFNGKSYDKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
D+ + + ++DP LFD L+ +Q + + ++SGYR+ TN L + +A+ S
Sbjct: 72 FFRDYRANKVKNIDPHLFDQLYRLQALLDTRKPVTLISGYRSLATNNSLRAHTKGVAKHS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H LG+A+D +I G++L ++ K A+ + GGVGYY S F+HID G R W
Sbjct: 132 YHTLGQAMDLHIDGIALSNVRKAALSMGAGGVGYYPSSNFVHIDTGPARHW 182
>gi|265987040|ref|ZP_06099597.1| peptidase M15 [Brucella pinnipedialis M292/94/1]
gi|264659237|gb|EEZ29498.1| peptidase M15 [Brucella pinnipedialis M292/94/1]
Length = 302
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|119945330|ref|YP_943010.1| hypothetical protein Ping_1614 [Psychromonas ingrahamii 37]
gi|119863934|gb|ABM03411.1| hypothetical protein DUF882 [Psychromonas ingrahamii 37]
Length = 183
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLD--QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
++ ++ + S+ + R L + + TG + + + G Y + + ++N
Sbjct: 11 AILTGIVTLGAICAPSASFASLFKNNPRELNLNNLHTGEELLTEYFDGKHYQRSEMKKIN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ ++I+MD +LFD L IQ+ + ++SGYR+ TNKMLS ++ +A+K
Sbjct: 71 HFCRDFRRNETINMDKRLFDHLMAIQKTIGSNSQVQLISGYRSPATNKMLSAQSGGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+LG+A+DF + GV L + K A+ LK GGVGYY S F+HID G VRSW
Sbjct: 131 SLHMLGRAIDFRLEGVPLIEVKKAALSLKVGGVGYYPKSNFVHIDTGNVRSW 182
>gi|260544278|ref|ZP_05820099.1| ATP/GTP-binding site-containing protein [Brucella abortus NCTC
8038]
gi|260097549|gb|EEW81423.1| ATP/GTP-binding site-containing protein [Brucella abortus NCTC
8038]
Length = 299
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|297250015|ref|ZP_06933716.1| ATP/GTP-binding site-containing protein A [Brucella abortus bv. 5
str. B3196]
gi|297173884|gb|EFH33248.1| ATP/GTP-binding site-containing protein A [Brucella abortus bv. 5
str. B3196]
Length = 283
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|254506992|ref|ZP_05119130.1| hypothetical protein VPMS16_2603 [Vibrio parahaemolyticus 16]
gi|219549987|gb|EED26974.1| hypothetical protein VPMS16_2603 [Vibrio parahaemolyticus 16]
Length = 180
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+ S ++ S + L +E R L + ++TG + + G +Y + LS+++
Sbjct: 11 LAGSGLVVASCAPSLAFASL--PDEPRALALKALNTGEELEACYFDGQKYVKNELSRIDH 68
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + MD LFD + IQ V + ++SGYR+ TN+ L + +A+KS
Sbjct: 69 LCRDFRRNEVHTMDKYLFDQISLIQSELGVESEVIVISGYRSPATNEALRSNSGGVAKKS 128
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
H+LG+A+DF + GV+L+ + AI LK GGVGYY S F+HID G VR W+
Sbjct: 129 YHMLGQAIDFRLDGVNLKQVRDAAISLKAGGVGYYPRSNFIHIDTGPVRYWS 180
>gi|218672878|ref|ZP_03522547.1| hypothetical protein RetlG_15208 [Rhizobium etli GR56]
Length = 220
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 8/192 (4%)
Query: 15 IGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
G ++ S ++ P L +S L E R LK++ TG KA +T+
Sbjct: 2 SGGIATLLSRAKRIAAQTILPALFALPALVGSAS--LASAEDRALKLFFTHTGEKATITY 59
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+++S YR+
Sbjct: 60 KRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHVVSAYRSPT 119
Query: 135 TNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKF 188
TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L IA++++ GGVGYY S F
Sbjct: 120 TNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLTTLRAIAMQMQVGGVGYYPTSGSPF 179
Query: 189 LHIDVGRVRSWT 200
+H+DVG VR+W
Sbjct: 180 VHLDVGNVRAWP 191
>gi|261313803|ref|ZP_05953000.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261302829|gb|EEY06326.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 288
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|260568577|ref|ZP_05839046.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
40]
gi|260155242|gb|EEW90323.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
40]
Length = 290
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|260564241|ref|ZP_05834726.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
1 str. 16M]
gi|260151884|gb|EEW86977.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
1 str. 16M]
Length = 294
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|265998934|ref|ZP_06111491.1| ATP/GTP-binding site domain-containing protein A [Brucella
melitensis bv. 2 str. 63/9]
gi|263091313|gb|EEZ15849.1| ATP/GTP-binding site domain-containing protein A [Brucella
melitensis bv. 2 str. 63/9]
Length = 280
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|304393279|ref|ZP_07375207.1| ATP/GTP-binding site motif A [Ahrensia sp. R2A130]
gi|303294286|gb|EFL88658.1| ATP/GTP-binding site motif A [Ahrensia sp. R2A130]
Length = 641
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 73/181 (40%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Query: 23 SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQE--EVRTLKIYVVSTGSKAIVTFKRGSQY 80
S F+ P+ + + + ++ Q E RTLK+Y T A +TFK+ +Y
Sbjct: 2 SRFLAFPLAFIPAMALALVVLTGWTAAFTTQASAETRTLKMYFTHTRESATITFKKNGKY 61
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
GL Q NR L DW K+ MDP L D +WE+ Q + I+++S YR+ TNKML
Sbjct: 62 IPSGLRQANRFLRDWRRKEPTKMDPALLDLVWEVYQKSGGRKGIHVISAYRSPRTNKMLR 121
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK-FLHIDVGRVRSW 199
RR R +A+ SQH GKA+DF IPGVS+ + + ++ RGGVG+Y F+H+D GRVR W
Sbjct: 122 RRGRNVAKTSQHTRGKAMDFAIPGVSVNKIRALGLKAHRGGVGFYRGAFVHLDTGRVRHW 181
Query: 200 T 200
Sbjct: 182 P 182
>gi|294853111|ref|ZP_06793783.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|294818766|gb|EFG35766.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
Length = 285
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|260882903|ref|ZP_05894517.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260872431|gb|EEX79500.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 272
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|91227205|ref|ZP_01261664.1| hypothetical protein V12G01_16462 [Vibrio alginolyticus 12G01]
gi|269967086|ref|ZP_06181154.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91188733|gb|EAS75021.1| hypothetical protein V12G01_16462 [Vibrio alginolyticus 12G01]
gi|269828345|gb|EEZ82611.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 169
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Query: 43 QSSMSSDLLDQ--EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S++ S +E R L + ++TG + G +Y + L +LN D +
Sbjct: 9 ASALPSFSWASLPDEPRALAMNNLNTGEILETCYFDGKRYINDELQRLNEFCRDHRRNEV 68
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
MD +LFD + +IQ+ + ++SGYR+ TN L + ++A+KS H+ GKA+DF
Sbjct: 69 HPMDRRLFDQISQIQKLIGTEAEVIVISGYRSPATNASLRNGSSRVAKKSMHMEGKAIDF 128
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GV L ++ A+ LK GGVGYY S F+HID G VRSW
Sbjct: 129 RLDGVKLSTVRDAALSLKAGGVGYYPGSNFVHIDTGAVRSW 169
>gi|260757094|ref|ZP_05869442.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 6 str. 870]
gi|261219955|ref|ZP_05934236.1| LOW QUALITY PROTEIN: peptidase M15 [Brucella ceti B1/94]
gi|261756316|ref|ZP_06000025.1| LOW QUALITY PROTEIN: ATP/GTP-binding site domain-containing protein
A [Brucella sp. F5/99]
gi|260677202|gb|EEX64023.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 6 str. 870]
gi|260918539|gb|EEX85192.1| LOW QUALITY PROTEIN: peptidase M15 [Brucella ceti B1/94]
gi|261736300|gb|EEY24296.1| LOW QUALITY PROTEIN: ATP/GTP-binding site domain-containing protein
A [Brucella sp. F5/99]
Length = 260
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|265996702|ref|ZP_06109259.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262550999|gb|EEZ07160.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 262
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|260759536|ref|ZP_05871884.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 4 str. 292]
gi|261753090|ref|ZP_05996799.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 3 str. 686]
gi|260669854|gb|EEX56794.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 4 str. 292]
gi|261742843|gb|EEY30769.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 3 str. 686]
Length = 258
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|256030017|ref|ZP_05443631.1| ATP/GTP-binding motif-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 263
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|256252869|ref|ZP_05458405.1| hypothetical protein BcetB_00850 [Brucella ceti B1/94]
Length = 258
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|323500086|ref|ZP_08105040.1| hypothetical protein VISI1226_08739 [Vibrio sinaloensis DSM 21326]
gi|323314942|gb|EGA67999.1| hypothetical protein VISI1226_08739 [Vibrio sinaloensis DSM 21326]
Length = 180
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLL 92
L+ + + + ++ R L + ++TG + G Y ++ LS+++ L
Sbjct: 11 LAGSGLVVASCAPSVAFAAYPDKPRALALKALNTGEALETCYFDGRDYLKKELSRIDNLC 70
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
D+ + MD LFD + IQ V + ++SGYR+ TN+ L ++ +A+KS H
Sbjct: 71 RDFRRNEVHPMDKYLFDQISLIQSELGVEAEVIVISGYRSPATNEALRGKSGGVAKKSYH 130
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+LG+A+DF + GV L+ + A+ LK GGVGYY S F+HID G VRSW+
Sbjct: 131 MLGQAIDFRLDGVDLKKVRDAALSLKAGGVGYYPRSNFVHIDTGPVRSWS 180
>gi|261319592|ref|ZP_05958789.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261292282|gb|EEX95778.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 289
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLVKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|261216725|ref|ZP_05931006.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260921814|gb|EEX88382.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 294
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLVKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|260166932|ref|ZP_05753743.1| hypothetical protein BruF5_00835 [Brucella sp. F5/99]
Length = 253
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|254731773|ref|ZP_05190351.1| hypothetical protein Babob42_11415 [Brucella abortus bv. 4 str.
292]
Length = 253
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|254706355|ref|ZP_05168183.1| hypothetical protein BpinM_05030 [Brucella pinnipedialis
M163/99/10]
Length = 249
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|254698330|ref|ZP_05160158.1| hypothetical protein Babob28_11615 [Brucella abortus bv. 2 str.
86/8/59]
Length = 255
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|254691473|ref|ZP_05154727.1| hypothetical protein Babob68_15275 [Brucella abortus bv. 6 str.
870]
gi|254699400|ref|ZP_05161228.1| hypothetical protein Bsuib55_00854 [Brucella suis bv. 5 str. 513]
Length = 250
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|296448822|ref|ZP_06890665.1| protein of unknown function DUF882 [Methylosinus trichosporium
OB3b]
gi|296253674|gb|EFH00858.1| protein of unknown function DUF882 [Methylosinus trichosporium
OB3b]
Length = 301
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S + + E RTL +Y T + T+ +Y++ L QLN L DW + MD
Sbjct: 33 SFTESAVANGETRTLYLYHAHTHEQIAATYLVNGRYDESVLEQLNWFLRDWRRDEPTKMD 92
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+LFD +W+ + E ++++S YR+ ETN ML R+R +AR SQH+LGKA+D +PG
Sbjct: 93 PRLFDVVWQAYRDAGANEPVHVVSAYRSPETNAMLRSRSRAVARHSQHMLGKAMDTTMPG 152
Query: 165 VSLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSWT 200
+S+ ++ +I +R++RGGVGYY F+H+DVG VRSW
Sbjct: 153 MSMSTIREIGMRMQRGGVGYYPNAGTPFVHLDVGSVRSWP 192
>gi|254702518|ref|ZP_05164346.1| hypothetical protein Bsuib36_00877 [Brucella suis bv. 3 str. 686]
Length = 237
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|197284625|ref|YP_002150497.1| hypothetical protein PMI0731 [Proteus mirabilis HI4320]
gi|227356808|ref|ZP_03841193.1| protein of hypothetical function DUF882 [Proteus mirabilis ATCC
29906]
gi|194682112|emb|CAR41706.1| putative exported protein [Proteus mirabilis HI4320]
gi|227163098|gb|EEI48033.1| protein of hypothetical function DUF882 [Proteus mirabilis ATCC
29906]
Length = 182
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 18/191 (9%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ W+GL ++ L+ H +S L + L+ ++TG
Sbjct: 8 RRKWLGLGMAAVGL-----------GLLPSHAFAS-----LATPRPKILRFNNLNTGETI 51
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
F G +YN++ L++LN L D + +DP LFD ++ +Q + + + ++SGY
Sbjct: 52 KAEFFDGKRYNKQELARLNHLFRDHRQNKVKTIDPALFDQIYLLQVMLNNNKAVELISGY 111
Query: 131 RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKF 188
R+ TN L + +A+KS H G+A+DF + G L + ++A+R+K GGVGYY S F
Sbjct: 112 RSLATNNHLRQHTSGVAKKSYHTRGQAMDFRLVGTDLSKVRQVALRMKAGGVGYYPRSNF 171
Query: 189 LHIDVGRVRSW 199
+HID G VRSW
Sbjct: 172 VHIDTGPVRSW 182
>gi|149191673|ref|ZP_01869916.1| hypothetical protein VSAK1_04605 [Vibrio shilonii AK1]
gi|148834514|gb|EDL51508.1| hypothetical protein VSAK1_04605 [Vibrio shilonii AK1]
Length = 181
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 48 SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQL 107
S + RTL + + TG + G++Y Q L++LN L D ++ MD +L
Sbjct: 28 SFAMPSSAPRTLAMNNLHTGESLESRYFDGAKYIQAELARLNTLCRDHRRNETHSMDKRL 87
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
FD + EIQ V + I+SGYR+ ETN L + +A+KS H+LG+A+DF + GV L
Sbjct: 88 FDQISEIQSLLGVKSEVLIISGYRSPETNASLRSGSNGVAKKSLHMLGQAIDFRLDGVKL 147
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
L++ A+ +K GGVGYY S+F+HID G VR+W
Sbjct: 148 SHLHEAALTIKAGGVGYYPRSQFVHIDTGPVRNW 181
>gi|28898689|ref|NP_798294.1| hypothetical protein VP1915 [Vibrio parahaemolyticus RIMD 2210633]
gi|308095628|ref|ZP_05907246.2| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
Peru-466]
gi|28806907|dbj|BAC60178.1| putative exported protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086594|gb|EFO36289.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
Peru-466]
Length = 186
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G++Y + L +LN D + MD +LFD + +
Sbjct: 39 DEPRVLAMNNLNTGELLETCYFDGNRYVGKELQRLNEFCRDHRRNEVHPMDKRLFDQISQ 98
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 99 IQKLIGTESEVIVISGYRSPVTNASLRSGSTGVAKKSLHMEGKAIDFRLDGVKLSTVRDA 158
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VRSW
Sbjct: 159 AISLKAGGVGYYPGSNFVHIDTGAVRSW 186
>gi|254720667|ref|ZP_05182478.1| ATP/GTP-binding motif-containing protein [Brucella sp. 83/13]
Length = 266
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|256256658|ref|ZP_05462194.1| hypothetical protein Babob9C_04715 [Brucella abortus bv. 9 str.
C68]
Length = 233
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|153839458|ref|ZP_01992125.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ3810]
gi|260363712|ref|ZP_05776496.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
K5030]
gi|260879721|ref|ZP_05892076.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AN-5034]
gi|260901618|ref|ZP_05910013.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ4037]
gi|149747015|gb|EDM58003.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ3810]
gi|308093403|gb|EFO43098.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AN-5034]
gi|308108693|gb|EFO46233.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
AQ4037]
gi|308113391|gb|EFO50931.1| twin-arginine translocation pathway signal [Vibrio parahaemolyticus
K5030]
gi|328474746|gb|EGF45551.1| hypothetical protein VP10329_18625 [Vibrio parahaemolyticus 10329]
Length = 182
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G++Y + L +LN D + MD +LFD + +
Sbjct: 35 DEPRVLAMNNLNTGELLETCYFDGNRYVGKELQRLNEFCRDHRRNEVHPMDKRLFDQISQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 95 IQKLIGTESEVIVISGYRSPVTNASLRSGSTGVAKKSLHMEGKAIDFRLDGVKLSTVRDA 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VRSW
Sbjct: 155 AISLKAGGVGYYPGSNFVHIDTGAVRSW 182
>gi|254711354|ref|ZP_05173165.1| hypothetical protein BpinB_14075 [Brucella pinnipedialis B2/94]
gi|261318956|ref|ZP_05958153.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298179|gb|EEY01676.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 224
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|153835591|ref|ZP_01988258.1| twin-arginine translocation pathway signal [Vibrio harveyi HY01]
gi|148867808|gb|EDL67048.1| twin-arginine translocation pathway signal [Vibrio harveyi HY01]
Length = 182
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + GS Y E L +L++ D + MD +LFD + +
Sbjct: 35 DEPRVLAMNNLNTGELLESCYFNGSSYVDEELKRLDKFCRDHRRNEVHPMDRRLFDQISQ 94
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++ +
Sbjct: 95 IQKLIGTEAEVIVISGYRSPVTNASLRNSSSGVAKKSMHMEGKAIDFRLDGVKLSTVREA 154
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 155 ALSLKAGGVGYYPRSNFVHIDTGAVRSW 182
>gi|262393899|ref|YP_003285753.1| hypothetical protein VEA_003128 [Vibrio sp. Ex25]
gi|262337493|gb|ACY51288.1| hypothetical protein VEA_003128 [Vibrio sp. Ex25]
Length = 169
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + G +Y + L +LN D + MD +LFD + +
Sbjct: 22 DEPRELAMNNLNTGELLETCYFDGRRYLDDELKKLNEFCRDHRRNEVHPMDRRLFDQISQ 81
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++
Sbjct: 82 IQKLIGTDAEVIVISGYRSPLTNASLRKGASGVAKKSLHMEGKAIDFRLDGVKLSAVRDA 141
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID G VRSW
Sbjct: 142 AISLKAGGVGYYPSSNFVHIDTGAVRSW 169
>gi|260762781|ref|ZP_05875113.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 2 str. 86/8/59]
gi|261749848|ref|ZP_05993557.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 5 str. 513]
gi|260673202|gb|EEX60023.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus bv. 2 str. 86/8/59]
gi|261739601|gb|EEY27527.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella suis
bv. 5 str. 513]
Length = 238
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|113970170|ref|YP_733963.1| hypothetical protein Shewmr4_1832 [Shewanella sp. MR-4]
gi|114047640|ref|YP_738190.1| hypothetical protein Shewmr7_2145 [Shewanella sp. MR-7]
gi|117920335|ref|YP_869527.1| hypothetical protein Shewana3_1890 [Shewanella sp. ANA-3]
gi|113884854|gb|ABI38906.1| protein of unknown function DUF882 [Shewanella sp. MR-4]
gi|113889082|gb|ABI43133.1| protein of unknown function DUF882 [Shewanella sp. MR-7]
gi|117612667|gb|ABK48121.1| protein of unknown function DUF882 [Shewanella sp. ANA-3]
Length = 182
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + S + + VR L +Y TG ++ Y E L+ +
Sbjct: 11 LLLGLSGVALCSLIPSKAFASRSTKGVRDLSLYNRHTGEHNNGSYWIDGHYQSEVLNDFS 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + MD +LFD L+ ++ + I+++SGYR+ +TN ML+ ++ +A+K
Sbjct: 71 HLLRDHRQNVAAPMDKRLFDLLYTLKSTLNTENEIHVISGYRSPKTNAMLAGKSSGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G A+D IPGV+L++L A+ LK GGVGYY S F+H+D G VR W
Sbjct: 131 SYHMQGMAMDIAIPGVNLKTLRDAALSLKLGGVGYYPKSGFVHVDCGPVRHW 182
>gi|256158190|ref|ZP_05456099.1| ATP/GTP-binding motif-containing protein [Brucella ceti M490/95/1]
Length = 240
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW
Sbjct: 11 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRR 70
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 71 NEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 130
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 131 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 177
>gi|222081765|ref|YP_002541130.1| hypothetical protein Arad_8202 [Agrobacterium radiobacter K84]
gi|221726444|gb|ACM29533.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 423
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 69/170 (40%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
L+ ++ + E R LK++ TG KA + FKR +++ +GL+Q+NR L DW
Sbjct: 12 LVAMLVLAAFAGSTAAAAEDRALKLFFTHTGEKATIVFKRDGKFDPKGLAQINRFLRDWR 71
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVL 154
+ +DP+L D +WE+ + S E I+++S YR+ TN ML R+R +A+ SQH L
Sbjct: 72 KNEPTRIDPELLDLVWEVYRRSSAREAIHVVSAYRSPSTNNMLRGRSRSSGVAKHSQHTL 131
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRSWT 200
GKA+DFYIPGV L +L +A++++ GGVG+Y F+H+DVG VR+W
Sbjct: 132 GKAMDFYIPGVKLATLRAVAMQMQAGGVGFYPNSGSPFVHLDVGNVRAWP 181
>gi|254715023|ref|ZP_05176834.1| hypothetical protein BcetM_00877 [Brucella ceti M13/05/1]
Length = 255
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLVKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|254711953|ref|ZP_05173764.1| hypothetical protein BcetM6_00867 [Brucella ceti M644/93/1]
Length = 250
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL +LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLVKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|209694859|ref|YP_002262787.1| putative membrane associated peptidase [Aliivibrio salmonicida
LFI1238]
gi|208008810|emb|CAQ79013.1| putative membrane associated peptidase [Aliivibrio salmonicida
LFI1238]
Length = 183
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 56 VRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ 115
R L + TG K + G QY+ L +LN L D+ ++IDMD LFD L IQ
Sbjct: 37 PRELAFKNLHTGEKLQSEYFNGQQYSNSELLKLNHLCRDFRRNETIDMDTGLFDQLSAIQ 96
Query: 116 QYFSVPEYIYILSGYRTQETNKMLSRRN-RKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ + I+SGYR+ TN+ML ++ +A+KS H+LGKA+DF + V L + K A
Sbjct: 97 KVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEDVPLIEVRKAA 156
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ LK GGVGYY S F+HID GRVR W
Sbjct: 157 LSLKAGGVGYYPGSNFVHIDTGRVRFW 183
>gi|261323641|ref|ZP_05962838.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299621|gb|EEY03118.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 285
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 70/167 (41%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
+ + + E R+LK+Y V TG KA + FK+ ++ +GL LN L DW
Sbjct: 33 LAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKCLNVFLRDWRR 92
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ MDP+LFD +W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A
Sbjct: 93 NEPTRMDPRLFDLIWQVYQSAGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRA 152
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+D++IPGV L L I +R + GGVGYY S F+H+DVG VR W
Sbjct: 153 MDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 199
>gi|126174125|ref|YP_001050274.1| hypothetical protein Sbal_1899 [Shewanella baltica OS155]
gi|125997330|gb|ABN61405.1| protein of unknown function DUF882 [Shewanella baltica OS155]
Length = 182
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + S ++ + +R L ++ TG + ++ Y + L+ N
Sbjct: 11 LLLGLSGVALCSLIPSKAAASRSTKGIRELSLFNRHTGERDDGSYWVDGHYQSKVLNDFN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + MD +LFD L+ ++ +V + I+++SGYR+ +TN ML+ + +A+K
Sbjct: 71 HLLRDHRQNVAAPMDKRLFDLLYSLKTTLNVDDEIHVISGYRSPKTNAMLASNSGGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
S H+ G A+D IP V L++L + A+ LK GGVGYY F+H+D G VR W
Sbjct: 131 SYHMRGMAMDIAIPSVKLKTLREAALSLKLGGVGYYPNSGFVHVDCGPVRHW 182
>gi|323139812|ref|ZP_08074846.1| protein of unknown function DUF882 [Methylocystis sp. ATCC 49242]
gi|322394948|gb|EFX97515.1| protein of unknown function DUF882 [Methylocystis sp. ATCC 49242]
Length = 599
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 63/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S++ + + RT+ ++ TG T+ QY+ L QLN L DW + +MD
Sbjct: 29 SLTETAIANGDTRTIYLHHAHTGEDIAATYLVNGQYDSNVLRQLNWFLRDWRRDEPTNMD 88
Query: 105 PQLFDFLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
P+LFD +WE + + I ++S YR+ ETN ML R+R +A+ SQH+LGKA+D +P
Sbjct: 89 PRLFDVVWEAYRTAGAGNQVINVVSAYRSPETNAMLRSRSRAVAKYSQHMLGKAMDTTMP 148
Query: 164 GVSLRSLYKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
G+ + + +I +R++RGGVGYY F+H+DVG VRSW
Sbjct: 149 GMPMSHIREIGMRMQRGGVGYYPTAGTPFVHLDVGNVRSWP 189
>gi|269961714|ref|ZP_06176075.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833579|gb|EEZ87677.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 169
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
+ ++ +MS L +E R L + ++TG + G+ Y E L +L++
Sbjct: 3 AGGVVVASAMPTMSWASL-PDEPRVLAMNNLNTGELLESCYFNGTNYVDEELKRLDQFCR 61
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D + MD +LFD + +IQ+ + ++SGYR+ TN L + +A+KS H+
Sbjct: 62 DHRRNEVHPMDRRLFDQISQIQKLIGTEAEVIVISGYRSPLTNASLRNGSSGVAKKSMHM 121
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GKA+DF + GV L ++ A+ LK GGVGYY S F+HID G VRSW
Sbjct: 122 EGKAIDFRLDGVKLSTVRDAALSLKAGGVGYYPRSNFVHIDTGAVRSW 169
>gi|160875047|ref|YP_001554363.1| hypothetical protein Sbal195_1932 [Shewanella baltica OS195]
gi|217973561|ref|YP_002358312.1| hypothetical protein Sbal223_2394 [Shewanella baltica OS223]
gi|304411334|ref|ZP_07392948.1| protein of unknown function DUF882 [Shewanella baltica OS183]
gi|307305344|ref|ZP_07585092.1| protein of unknown function DUF882 [Shewanella baltica BA175]
gi|160860569|gb|ABX49103.1| protein of unknown function DUF882 [Shewanella baltica OS195]
gi|217498696|gb|ACK46889.1| protein of unknown function DUF882 [Shewanella baltica OS223]
gi|304350189|gb|EFM14593.1| protein of unknown function DUF882 [Shewanella baltica OS183]
gi|306911647|gb|EFN42072.1| protein of unknown function DUF882 [Shewanella baltica BA175]
gi|315267279|gb|ADT94132.1| protein of unknown function DUF882 [Shewanella baltica OS678]
Length = 182
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + S ++ + +R L ++ TG + ++ Y + L+ N
Sbjct: 11 LLLGLSGVALCSLIPSKAAASRSTKGIRELSLFNRHTGERDDGSYWVDGHYQSKVLNDFN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + MD +LFD L+ ++ +V + I+++SGYR+ +TN ML+ + +A+K
Sbjct: 71 HLLRDHRQNVAAPMDKRLFDLLYSLKTTLNVDDEIHVISGYRSPKTNAMLASHSGGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
S H+ G A+D IP V L++L + A+ LK GGVGYY F+H+D G VR W
Sbjct: 131 SYHMRGMAMDIAIPSVKLKTLREAALSLKLGGVGYYPNSGFVHVDCGPVRHW 182
>gi|24373670|ref|NP_717713.1| hypothetical protein SO_2110 [Shewanella oneidensis MR-1]
gi|24348020|gb|AAN55157.1|AE015652_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 182
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S + + VR L ++ TG ++ Y E L+ + LL D + MD
Sbjct: 26 SKAIASRSTKGVRELSLFNRHTGEYNNGSYWVDGHYQSEVLADFSHLLRDHRQNVAAPMD 85
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+LFD L+ ++ + + I+++SGYR+ +TN ML+ ++ +A+KS H+ G A+D IPG
Sbjct: 86 KRLFDLLYTLKSTLNTDKEIHVISGYRSPKTNAMLAGKSGGVAKKSYHMQGMAMDIAIPG 145
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
V+L+++ A+ LK GGVGYY S F+H+D G VR W
Sbjct: 146 VNLKTIRDAALSLKLGGVGYYPKSGFVHVDCGPVRHW 182
>gi|156974987|ref|YP_001445894.1| hypothetical protein VIBHAR_02709 [Vibrio harveyi ATCC BAA-1116]
gi|156526581|gb|ABU71667.1| hypothetical protein VIBHAR_02709 [Vibrio harveyi ATCC BAA-1116]
Length = 195
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+E R L + ++TG + GS Y E L +L++ D + MD +LFD + +
Sbjct: 48 DEPRVLAMNNLNTGELLESCYFNGSSYVDEELKRLDKFCRDHRRNEVHPMDRRLFDQISQ 107
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
IQ+ + ++SGYR+ TN L + +A+KS H+ GKA+DF + GV L ++ +
Sbjct: 108 IQKLIGTEAEVIVISGYRSPVTNASLRNSSSGVAKKSMHMEGKAIDFRLDGVKLSTVREA 167
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+ LK GGVGYY S F+HID G VRSW
Sbjct: 168 ALSLKAGGVGYYPRSNFVHIDSGAVRSW 195
>gi|114706843|ref|ZP_01439743.1| ATP/GTP-binding site motif A (P-loop) [Fulvimarina pelagi HTCC2506]
gi|114537791|gb|EAU40915.1| ATP/GTP-binding site motif A (P-loop) [Fulvimarina pelagi HTCC2506]
Length = 509
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
+ L+ E RTLK Y + T + +KR +Y Q + ++N L
Sbjct: 7 ALALVACAFALGAFGTASAFAETRTLKFYNLHTKERGSFAYKRNGRYVQSEVKKINWFLR 66
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
DW ++ MDPQL D LWE + +YI ++S YR+ TN ML R A+KSQH+
Sbjct: 67 DWRQGKATTMDPQLLDLLWEAYRQAGARDYINVVSAYRSPATNGMLRRTRGGQAKKSQHM 126
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
+G+A+DF+IPGV L +L I ++++ GGVGYY S F+H D G R W
Sbjct: 127 VGRALDFFIPGVKLSTLRAIGLKMQVGGVGYYPKSGSPFVHFDTGNARHWP 177
>gi|256059669|ref|ZP_05449864.1| hypothetical protein Bneo5_04885 [Brucella neotomae 5K33]
Length = 246
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 4/153 (2%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
E R+LK+Y V TG KA + FK+ ++ +GL LN L DW + MDP+LFD +
Sbjct: 8 ASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKCLNVFLRDWRRNEPTRMDPRLFDLI 67
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
W++ Q EYI ++S YR+ TN ML R +A+KSQH+LG+A+D++IPGV L L
Sbjct: 68 WQVYQSAGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLR 127
Query: 172 KIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
I +R + GGVGYY S F+H+DVG VR W
Sbjct: 128 AIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWP 160
>gi|153000450|ref|YP_001366131.1| hypothetical protein Shew185_1925 [Shewanella baltica OS185]
gi|151365068|gb|ABS08068.1| protein of unknown function DUF882 [Shewanella baltica OS185]
Length = 182
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + S + + +R L ++ TG + ++ Y + L+ N
Sbjct: 11 LLLGLSGVALCSLIPSKAVASRSTKGIRELSLFNRHTGERDDGSYWVDGHYQSKVLNDFN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + MD +LFD L+ ++ +V + I+++SGYR+ +TN ML+ + +A+K
Sbjct: 71 HLLRDHRQNVAAPMDKRLFDLLYSLKTTLNVDDEIHVISGYRSPKTNAMLASHSGGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
S H+ G A+D IP V L++L + A+ LK GGVGYY F+H+D G VR W
Sbjct: 131 SYHMRGMAMDIAIPSVKLKTLREAALSLKLGGVGYYPNSGFVHVDCGPVRHW 182
>gi|269102897|ref|ZP_06155594.1| hypothetical outer membrane protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162795|gb|EEZ41291.1| hypothetical outer membrane protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 185
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + L + + ++ RT+ + + TG + G Y L ++N
Sbjct: 12 LIAGGLALGACALPGTAIATPFKAKDPRTISLCNIHTGENLETEYYNGRGYIYSELKRMN 71
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L D+ ++ MD +LFD + IQ I+SGYR+ TNKML+RR+ +A+K
Sbjct: 72 HLCRDFRQNEATRMDKRLFDTIAHIQDVLGHKGQAQIISGYRSPATNKMLARRSGGVAKK 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+DF + G+ L + ++A+ L GGVGYY S F+HID G VR W
Sbjct: 132 SYHMTGQAIDFNLEGIPLSKVRRVAMELNIGGVGYYPKSGFVHIDTGPVRQW 183
>gi|323492995|ref|ZP_08098132.1| hypothetical protein VIBR0546_16231 [Vibrio brasiliensis LMG 20546]
gi|323312774|gb|EGA65901.1| hypothetical protein VIBR0546_16231 [Vibrio brasiliensis LMG 20546]
Length = 180
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEE-VRTLKIYVVSTGSKAIVTFKRGSQYNQ 82
++ + + S L + R+L + + T + G+ Y
Sbjct: 1 MALSRRDFIKLAGSGLVVASCAPSVALAGYPDKPRSLALTNLHTREALETCYFDGNNYVS 60
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ LS+LN + D+ + MD +LFD + IQ+ SV + I+SGYR+ TN+ L +
Sbjct: 61 KELSRLNHICRDFRRNEVHPMDKRLFDHISLIQKELSVETEVQIISGYRSPATNEALRGK 120
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
++ +A+KS H+LG+A+DF + GVSL+ + ++ LK GGVGYY S F+HID G VR W+
Sbjct: 121 SKGVAKKSYHMLGQAIDFRLDGVSLKRVRDVSRELKLGGVGYYPGSNFVHIDTGPVRYWS 180
>gi|85058982|ref|YP_454684.1| hypothetical protein SG1004 [Sodalis glossinidius str. 'morsitans']
gi|84779502|dbj|BAE74279.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 182
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
++ + + ++ ++ R L + + TG F G Y+Q LS+LN
Sbjct: 13 VFGTAAAGLALLPGTAFTTLF--TPRPRMLTLNNLHTGETLKTEFFNGKSYDQSELSRLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DPQLFD L+ +Q + + ++SGYRT +TN L ++ +A+
Sbjct: 71 HFFCDFRANKITTIDPQLFDHLYRLQTVLQTRKPVQLISGYRTVQTNNSLRAKSEGVAKH 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H LGKA+DF+I G L + K A++L GGVGYY S F+HID G R+W
Sbjct: 131 SYHTLGKAMDFHIEGTPLSLILKAALKLHMGGVGYYPRSNFVHIDTGPERTW 182
>gi|320540486|ref|ZP_08040136.1| putative conserved protein [Serratia symbiotica str. Tucson]
gi|320029417|gb|EFW11446.1| putative conserved protein [Serratia symbiotica str. Tucson]
Length = 164
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 4/164 (2%)
Query: 38 IKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHS 97
I +S+ +S R L + ++TG F G YN+E L +LN L D+ S
Sbjct: 3 IALLPRSAFASF--STARPRILVVNNLNTGESIKAEFFDGKGYNKEELVRLNYLFRDYRS 60
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ +DP LFD L+ +Q + + ++SGYR+ +TN L +R +AR S H G+A
Sbjct: 61 HKIKSIDPCLFDHLYRLQGLLGTSKPVQLISGYRSLDTNNELRAHSRGVARHSYHTKGQA 120
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+DF+I G+ L ++ K A+++ GGVGYY S F+HID G RSW
Sbjct: 121 MDFHIEGIQLSNIRKAALKMHAGGVGYYPRSNFVHIDTGPARSW 164
>gi|262402379|ref|ZP_06078940.1| lipoprotein putative [Vibrio sp. RC586]
gi|262351161|gb|EEZ00294.1| lipoprotein putative [Vibrio sp. RC586]
Length = 144
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+ + TG + G Y + L +LN L D+ + MD LFD L +IQQ
Sbjct: 1 MSNLHTGESIETRYFNGKNYVRSELKRLNYLCRDFRRDEVHAMDKVLFDQLCQIQQLLGT 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
++I+SGYR+ TNK L ++++ +A+KS H+ G+A+DF + GVSL+ + + AI L+ G
Sbjct: 61 QAEVHIVSGYRSPATNKQLRKKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQVG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVGYY S+F+HID G VR W
Sbjct: 121 GVGYYPKSQFIHIDTGPVRQW 141
>gi|322832249|ref|YP_004212276.1| hypothetical protein Rahaq_1527 [Rahnella sp. Y9602]
gi|321167450|gb|ADW73149.1| protein of unknown function DUF882 [Rahnella sp. Y9602]
Length = 183
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + + L R L + ++TG F G +YN++ L++LN
Sbjct: 12 LALGSAAMGIALLPGRAFATLSTPRPRILVVNNINTGETLKTEFFDGKRYNKDELARLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L D+ +++ +DP LFD L+ +Q + + ++SGYR+ TN + +A+
Sbjct: 72 LFRDYRAEKVKSIDPALFDHLYRLQVMLGGTNKPVQLISGYRSLATNNSMREPGSGVAKH 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H LG+A+DF+I G+ L ++ K A++++ GGVGYY S F+HID G R+W
Sbjct: 132 SYHTLGQAMDFHIQGIELSNIRKAALKMRMGGVGYYPRSNFVHIDTGPARTW 183
>gi|145298229|ref|YP_001141070.1| hypothetical protein ASA_1214 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851001|gb|ABO89322.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 181
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG + ++ +Y Q+GL++LN + D+ + ++D +LFD L+ +Q
Sbjct: 37 RELSFFNLNTGERVQASYWENGRYLQDGLAELNHIFRDYRRNEVFNIDKKLFDQLYLLQH 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I ++SGYR+ TN+ ++R +A+ S H LG+AVD IPGV L L K A+
Sbjct: 97 KLGRNGEIQLISGYRSPATNRQKRSKSRGVAKHSYHTLGQAVDVRIPGVQLAHLRKAALN 156
Query: 177 LKRGGVGYYS--KFLHIDVGRVRSW 199
LK GGVGYY F+H+D G VRSW
Sbjct: 157 LKVGGVGYYPSDNFVHLDTGPVRSW 181
>gi|54309517|ref|YP_130537.1| hypothetical protein PBPRA2350 [Photobacterium profundum SS9]
gi|46913953|emb|CAG20735.1| hypothetical outer membrane protein [Photobacterium profundum SS9]
Length = 182
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 25 FVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEG 84
+ + +L L+ +S R + + + TG F G Y +
Sbjct: 11 LLIAGGLTLGACLVPGMAIASPFKAT----NPRKISLCNIHTGEDIDSEFFNGESYIKTE 66
Query: 85 LSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR 144
L +++ + D+ + MD +LFD + EIQ + I+SGYR+ TNKML ++
Sbjct: 67 LKRIDNICRDFRQNEVAKMDKRLFDAITEIQANLGHKGQVRIISGYRSPATNKMLQKKG- 125
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A KS H+ G+A+DF + GVSL + K AI L+ GGVGYY S F+HID G VR W
Sbjct: 126 GVATKSYHMKGQAIDFNLEGVSLSKVRKAAIDLQLGGVGYYPKSNFVHIDTGPVRRW 182
>gi|308273622|emb|CBX30224.1| Uncharacterized protein ycbK [uncultured Desulfobacterium sp.]
Length = 181
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
E +TL Y + T + +Y + LS++N +L D + + +DPQL D L
Sbjct: 34 SEKKTLSFYNIHTQETLSADYWVNGEYMPDALSRINYILRDHRTDKIQPIDPQLLDILHV 93
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
++ + + +I+SGYR+QETN +L ++ R +AR S H+LGKA+D +PG L L
Sbjct: 94 LRTQITENQPFHIISGYRSQETNALLRKQGRGVARHSYHILGKAIDIRLPGCCLPELRDA 153
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A +L+ GGVGYY S+F+H+D G VR W
Sbjct: 154 ARKLEMGGVGYYPRSEFIHVDTGPVRHW 181
>gi|188591282|ref|YP_001795882.1| hypothetical protein RALTA_A0494 [Cupriavidus taiwanensis LMG
19424]
gi|170938176|emb|CAP63162.1| conserved hypothetical protein, DUF882, COG3108; putative exported
protein [Cupriavidus taiwanensis LMG 19424]
Length = 195
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 8/184 (4%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSS-----DLLDQEEVRTLKIYVVSTGSKAIVTFKRGS 78
F T+ +L+ L+ + + +++S L + RTL TG + + + G
Sbjct: 12 FLHTTGTLALAAGLMPFAPRRALASLPAHGALAGLPDARTLAFDHTHTGERVSLVYAVGD 71
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
++ E L+ LN L D +S + +DPQLFD L+++++ + ++SGYR+ TN
Sbjct: 72 RFVPEALTTLNGFLRDHYSGKVGTIDPQLFDLLFQVRRELGTDQPFQVISGYRSPATNSR 131
Query: 139 LS-RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGR 195
L R +A+ S H+ GKA+D + GVSL + A L+ GGVGYY +F+HID GR
Sbjct: 132 LRNSRGGGVAKHSLHMDGKAIDIRLAGVSLADVRDAAKSLQGGGVGYYETDQFVHIDTGR 191
Query: 196 VRSW 199
VR W
Sbjct: 192 VRYW 195
>gi|319426479|gb|ADV54553.1| protein of unknown function DUF882 [Shewanella putrefaciens 200]
Length = 192
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
+ Y S ++ + +R L +Y TG + ++ Y E L+ ++LL D
Sbjct: 28 VALYSLLPSKAAASRSTKGIRELSLYNRHTGERNDGSYWVDGHYQSEVLADFSQLLRDHR 87
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ MD +LFD L+ ++ +V + I+++SGYR+ +TN ML+ + +A+KS H+ G
Sbjct: 88 QNIAAPMDKRLFDLLYSLKTTLNVDDEIHVISGYRSPKTNGMLANNSGGVAKKSYHMQGM 147
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+D IP V+L++L A+ LK GGVGYY S F+H+D G VR W
Sbjct: 148 AMDIAIPSVNLKTLRDAALSLKLGGVGYYPKSGFVHVDCGPVRRW 192
>gi|120598923|ref|YP_963497.1| hypothetical protein Sputw3181_2115 [Shewanella sp. W3-18-1]
gi|146292991|ref|YP_001183415.1| hypothetical protein Sputcn32_1893 [Shewanella putrefaciens CN-32]
gi|120559016|gb|ABM24943.1| protein of unknown function DUF882 [Shewanella sp. W3-18-1]
gi|145564681|gb|ABP75616.1| protein of unknown function DUF882 [Shewanella putrefaciens CN-32]
Length = 182
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
+ Y S ++ + +R L +Y TG + ++ Y E L+ ++LL D
Sbjct: 18 VALYSLLPSKAAASRSTKGIRELSLYNRHTGERNDGSYWVDGHYQSEVLADFSQLLRDHR 77
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ MD +LFD L+ ++ +V + I+++SGYR+ +TN ML+ + +A+KS H+ G
Sbjct: 78 QNIAAPMDKRLFDLLYSLKTTLNVDDEIHVISGYRSPKTNGMLANNSGGVAKKSYHMQGM 137
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+D IP V+L++L A+ LK GGVGYY S F+H+D G VR W
Sbjct: 138 AMDIAIPSVNLKTLRDAALSLKLGGVGYYPKSGFVHVDCGPVRRW 182
>gi|295688992|ref|YP_003592685.1| hypothetical protein Cseg_1580 [Caulobacter segnis ATCC 21756]
gi|295430895|gb|ADG10067.1| protein of unknown function DUF882 [Caulobacter segnis ATCC 21756]
Length = 212
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 15 IGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQE-------EVRTLKIYVVSTG 67
GL A+ I ++ L E R + ++ + TG
Sbjct: 16 AGLLPLAAARADDDIIGAILQGKQPSPAPVPAQPVLRPTPMAAPVPVETRWVHLHNIHTG 75
Query: 68 SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL 127
K + Y + + LN++L D+ + Q MDP L+D L +IQ ++
Sbjct: 76 EKLEAAYWENGDYVPDAVQALNKVLRDYRNDQVHPMDPGLYDILAKIQARTEAKSPFQVI 135
Query: 128 SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-- 185
SGYR+ TNKML+ R+ ++A+ S H+ GKA+D Y+ V+L + A+ L GGVGYY
Sbjct: 136 SGYRSPATNKMLANRSGEVAKHSLHMEGKAMDIYLEDVALEHVRAAALDLGMGGVGYYPQ 195
Query: 186 SKFLHIDVGRVRSW 199
S+F+H+DVGRVR W
Sbjct: 196 SRFVHVDVGRVRQW 209
>gi|163736472|ref|ZP_02143891.1| Twin-arginine translocation pathway signal [Phaeobacter
gallaeciensis BS107]
gi|161390342|gb|EDQ14692.1| Twin-arginine translocation pathway signal [Phaeobacter
gallaeciensis BS107]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 1 MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK 60
M TE + +G + A+ V +P + S+ + L ++R ++
Sbjct: 1 MATTEKSGFSRRALLGAF--AATTLVAAPTF------------SNAAGFLRGAGDIRRIR 46
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
++ TG + + + +Y ++ + ++N + DW + Q D+D + D + V
Sbjct: 47 MFSGRTGERIDMVYWIDGKYIKDAVKEVNHFMRDWRNDQVKDIDLRTIDIMAASHNLLDV 106
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + K A + G
Sbjct: 107 NEPYMMLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQAADLRLSSRSVSQMAKAAQACRAG 166
Query: 181 GVGYY--SKFLHIDVGRVRSWT 200
GVG Y S F+H+D G VRSW
Sbjct: 167 GVGKYNRSNFVHMDCGVVRSWN 188
>gi|167624265|ref|YP_001674559.1| hypothetical protein Shal_2341 [Shewanella halifaxensis HAW-EB4]
gi|167354287|gb|ABZ76900.1| protein of unknown function DUF882 [Shewanella halifaxensis
HAW-EB4]
Length = 182
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + + S + + VR+L Y TG + ++ Y E L+ +
Sbjct: 11 LLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWIDGDYQSEILTDFS 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
++L D ++ MD +LFDF ++++Q S + ++I+SGYR+ +TN ML++R+ +A+K
Sbjct: 71 QVLRDHRQNEAAPMDKRLFDFAYQLRQSLSFEDELHIISGYRSPKTNAMLAKRSNGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G A+D +PGV L + + AI LK GGVGYY S F+HID G VR W
Sbjct: 131 SYHMKGMALDLALPGVKLADIREAAIELKLGGVGYYPSSGFVHIDTGPVRHW 182
>gi|90414499|ref|ZP_01222474.1| hypothetical outer membrane protein [Photobacterium profundum 3TCK]
gi|90324407|gb|EAS40969.1| hypothetical outer membrane protein [Photobacterium profundum 3TCK]
Length = 182
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 25 FVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEG 84
+ + +L L+ +S R + + + TG F G Y +
Sbjct: 11 LLIAGGLTLGACLVPGMAIASPFKAT----NPRKISLCNIHTGEDIDSEFFNGESYIKTE 66
Query: 85 LSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR 144
L +++ + D+ + MD +LFD + EIQ + I+SGYR+ TNKML ++
Sbjct: 67 LKRIDNICRDFRRNEVAKMDKRLFDAITEIQANLGHKGQVRIISGYRSPATNKMLQKKG- 125
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+A KS H+ G+A+DF + GVSL + K AI L+ GGVGYY K F+HID G VR W
Sbjct: 126 GVATKSYHMKGQAIDFNLEGVSLSKVRKAAIDLQLGGVGYYPKSDFVHIDTGPVRRW 182
>gi|163743283|ref|ZP_02150664.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Phaeobacter gallaeciensis 2.10]
gi|161383471|gb|EDQ07859.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Phaeobacter gallaeciensis 2.10]
Length = 167
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
++ S+ + L ++R ++++ TG + + + +Y ++ + ++N + DW
Sbjct: 1 MVAAPTFSNAAGFLRGAGDIRRIRMFSGRTGERIDMVYWIDGKYIKDAVKEVNHFMRDWR 60
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ Q D+D + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+
Sbjct: 61 NDQVKDIDLRTIDIMAASHNLLDVNEPYMMLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQ 120
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
A D + S+ + K A + GGVG Y S F+H+D G VRSW
Sbjct: 121 AADLRLSSRSVSQMAKAAQACRAGGVGKYNRSNFVHMDCGVVRSWN 166
>gi|114562618|ref|YP_750131.1| twin-arginine translocation pathway signal [Shewanella
frigidimarina NCIMB 400]
gi|114333911|gb|ABI71293.1| Twin-arginine translocation pathway signal [Shewanella
frigidimarina NCIMB 400]
Length = 183
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ + V+ L+ Y + TG ++ +F QY E L++ N++L D + +D
Sbjct: 26 NTAQASRSTIGVKDLRFYNLHTGERSQGSFWVDGQYQSETLTEFNQVLRDHRQNVAAPID 85
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+LF++L+++Q + I+++S YR+ +TN+ML+ R+ +A+KS H+ G A+D +PG
Sbjct: 86 KRLFEYLYKLQATLDNQDEIHVISAYRSPKTNQMLASRSNGVAKKSYHMKGMAMDIALPG 145
Query: 165 VSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
V + L A LK GGVG+Y F+HID G VR W
Sbjct: 146 VKTKHLRDAAESLKLGGVGFYPRDGFVHIDCGPVRRW 182
>gi|127512757|ref|YP_001093954.1| hypothetical protein Shew_1829 [Shewanella loihica PV-4]
gi|126638052|gb|ABO23695.1| protein of unknown function DUF882 [Shewanella loihica PV-4]
Length = 163
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 59/162 (36%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 40 YHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQ 99
+ S + + VR+L Y TG + ++ Y L+ N LL D +
Sbjct: 2 FSMVPSKARASRSTQGVRSLGFYNRHTGERGQGSYWIDGDYQTNTLNDFNHLLRDHRQNE 61
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ MD +LFD L+ ++Q V E +++SGYR+ +TN+ML+ R+ +A+KS H+ G A+D
Sbjct: 62 TAPMDKRLFDLLFSLKQTLQVDEDFHVISGYRSPKTNQMLANRSSAVAKKSYHMKGMAMD 121
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+P V+L+ L AI LK GGVGYY S F+H+D G +R+W
Sbjct: 122 IALPDVNLKDLRDAAISLKLGGVGYYPSSGFVHVDTGPIRTW 163
>gi|114320194|ref|YP_741877.1| hypothetical protein Mlg_1034 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226588|gb|ABI56387.1| protein of unknown function DUF882 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 186
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 20 SVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQ 79
S + + + ++ + E R L + + TG K VT+ +
Sbjct: 5 STRGTGINRRRFLAWSAATLAMASTPITLAQAARTEHRDLAFHNLHTGEKLTVTYWEHGR 64
Query: 80 YNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
Y + LS++N +L D + + +DP L D L +QQ ++SGYR+ ETN+ L
Sbjct: 65 YLPDALSEVNHVLRDHRANEVHPIDPDLLDTLDALQQRLDTQATFEVISGYRSPETNRRL 124
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVR 197
+ R +A S H+ G+A+D +PG L + A+ L++GGVGYY S+F+H+DVG VR
Sbjct: 125 RAQGRNVAVYSLHMEGEAIDIRVPGRDLSQVRDAALSLQKGGVGYYPRSQFVHVDVGNVR 184
Query: 198 SW 199
SW
Sbjct: 185 SW 186
>gi|157961781|ref|YP_001501815.1| hypothetical protein Spea_1958 [Shewanella pealeana ATCC 700345]
gi|157846781|gb|ABV87280.1| protein of unknown function DUF882 [Shewanella pealeana ATCC
700345]
Length = 182
Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + + S + + VR+L Y TG + ++ Y E L+ +
Sbjct: 11 LLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWVDGDYQSEILTDFS 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
++L D ++ MD +LFDF +++++ S E ++++SGYR+ +TN ML+ R+ +A+K
Sbjct: 71 QVLRDHRQNEAAPMDKRLFDFAYQLRESLSFKEDLHVISGYRSPKTNAMLANRSNGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G A+D +PGV L + + A+ LK GGVGYY S F+HID G VRSW
Sbjct: 131 SYHMKGMALDLALPGVKLAHIREAALELKLGGVGYYPKSGFIHIDTGPVRSW 182
>gi|91792859|ref|YP_562510.1| hypothetical protein Sden_1502 [Shewanella denitrificans OS217]
gi|91714861|gb|ABE54787.1| protein of unknown function DUF882 [Shewanella denitrificans OS217]
Length = 182
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
I + + + + V+ L Y TG + F QY ++ L
Sbjct: 11 ILLGLSGVAVASLLPNKAHASRSSKGVKELSFYNRHTGERGQGDFWVDGQYQKDALKAFE 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
+L D + MD +L+D+L+++QQ + I+++S YR+ +TN+ML+ R+ +A+K
Sbjct: 71 HVLRDHRQNLAAPMDKRLYDYLFKLQQLVEYQDEIHVISAYRSPKTNQMLASRSNGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G A+D +PGV L L A LK GGVG+Y S F+H+D G VRSW
Sbjct: 131 SYHMKGMAMDIAMPGVKLAHLKDAAKSLKLGGVGFYPSSGFIHVDCGPVRSW 182
>gi|262275621|ref|ZP_06053430.1| hypothetical protein VHA_002602 [Grimontia hollisae CIP 101886]
gi|262219429|gb|EEY70745.1| hypothetical protein VHA_002602 [Grimontia hollisae CIP 101886]
Length = 183
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ L+ + L + R L ++ V+T V + G Y + L LN
Sbjct: 12 LLGSVACLVTAALPQPAFALPLTAGKPRNLDMFSVNTREHVDVCYFNGQTYLESELGSLN 71
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L D S DMDP+L+D L I + I ++SGYR+ TN+ML +R A+K
Sbjct: 72 HLCRDHRRNASTDMDPRLYDQLAAIYDFVDARNPITMVSGYRSPVTNEMLRKRGGGQAKK 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+DF+I V L L K A+ L+ GGVGYY S F+H+D G VRSW
Sbjct: 132 SYHMTGQAIDFFIEDVPLSKLRKAAVELQAGGVGYYPKSGFIHVDTGPVRSW 183
>gi|157375587|ref|YP_001474187.1| hypothetical protein Ssed_2450 [Shewanella sediminis HAW-EB3]
gi|157317961|gb|ABV37059.1| protein of unknown function DUF882 [Shewanella sediminis HAW-EB3]
Length = 182
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + + S VR+L + TG + ++ Y LS +
Sbjct: 11 LLLGLGGVAMFSMIPSKVQASRSTTGVRSLGFRNLHTGERGQGSYWVDGNYQSGILSDFS 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
+L D +S MD +L+D L+++++ +V + ++SGYR+ +TN ML+ ++ +A+K
Sbjct: 71 HILRDHRRNESAPMDKRLYDLLFKLKESLNVDQDFNVISGYRSPKTNAMLASKSNGVAKK 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G A+D IP V+L L + AI LK GGVGYY S F+H+D G VR+W
Sbjct: 131 SYHMKGMAMDIAIPDVNLSHLREAAIELKLGGVGYYPQSGFIHVDTGPVRTW 182
>gi|170741336|ref|YP_001769991.1| hypothetical protein M446_3151 [Methylobacterium sp. 4-46]
gi|168195610|gb|ACA17557.1| protein of unknown function DUF882 [Methylobacterium sp. 4-46]
Length = 501
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+ D + + RT+ I+ T A VTFKR +Y++ L QLN LL DW Q MDP+
Sbjct: 49 TQDAVANGDTRTITIFHEHTKESATVTFKRDGRYDRAALEQLNWLLRDWRIDQPTRMDPR 108
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
LFD +WE + + I+++S YR+ +TN L RR+R +A SQH+LGKA+DFY+ VS
Sbjct: 109 LFDVVWEAHRATGSQDAIHVVSAYRSPQTNAALRRRSRAVAEHSQHMLGKAMDFYLSDVS 168
Query: 167 LRSLYKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
+ + +I +R++RGGVG+Y F+H+DVG VRSW
Sbjct: 169 VDQVREIGMRMQRGGVGWYPHAYNPFVHLDVGSVRSWP 206
>gi|312112857|ref|YP_004010453.1| hypothetical protein Rvan_0064 [Rhodomicrobium vannielii ATCC
17100]
gi|311217986|gb|ADP69354.1| protein of unknown function DUF882 [Rhodomicrobium vannielii ATCC
17100]
Length = 409
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ E RT+ +Y + T K +TFK+ +Y E L +LN + DW +I +DP L D
Sbjct: 31 VSSAEERTISMYNIHTKDKISITFKKDGRYIPEALEKLNYFMRDWRRNMTIRIDPGLIDL 90
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
+WE+ E I+++ GYR+ TN++L + AR S+H+ G+A D P V L+ L
Sbjct: 91 MWELHNELGSKEPIHLICGYRSGGTNELLRQTRGGQARNSRHITGQAADLMFPDVPLKQL 150
Query: 171 YKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
A+ +RGGVGYY F+H+D G VR W
Sbjct: 151 RYSALVRERGGVGYYPESGLPFVHVDTGNVRHWP 184
>gi|212635581|ref|YP_002312106.1| hypothetical protein swp_2793 [Shewanella piezotolerans WP3]
gi|212557065|gb|ACJ29519.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 163
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Query: 40 YHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQ 99
+ + + + VR+L Y TG + ++ Y + L+ +++L D +
Sbjct: 2 FSMLPTKAQASRSTKGVRSLGFYNRHTGERGQGSYWIDGDYQSDILTDFSQVLRDHRQNE 61
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
S MD +LFDF + +++ + ++I+SGYR+ +TN+ML++R+ +A+KS H+ G A+D
Sbjct: 62 SAPMDKRLFDFAYLLKESLGYDDELHIISGYRSPKTNQMLAKRSNGVAKKSYHMKGMALD 121
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+PGV L + A+ LK GGVGYY F+HID G +RSW
Sbjct: 122 IAVPGVKLAEVRSAALALKLGGVGYYPNSGFVHIDTGPIRSW 163
>gi|114332478|ref|YP_748700.1| twin-arginine translocation pathway signal [Nitrosomonas eutropha
C91]
gi|114309492|gb|ABI60735.1| Twin-arginine translocation pathway signal [Nitrosomonas eutropha
C91]
Length = 194
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEV--RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
L L + +++ + + + L + + TG + + +Y E L + +
Sbjct: 24 LQASLGACALFAMPAANAANSPRIYEKRLSLLNLHTGERIRTAYWEQGKYIPEALQAIAK 83
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
+L D S + +DP L D + + + ++SGYR+ TN L+ ++ +A+KS
Sbjct: 84 VLRDHRSGERHPIDPGLLDLIQHLHHKTGSSKEFQVISGYRSPATNATLAAKSHGVAKKS 143
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+ GKA+D +PGV L +L + A+ ++ GGVGYY S F+H+D G VR W
Sbjct: 144 LHMQGKAIDIRLPGVPLNALRRAAMSMRVGGVGYYPESNFIHVDTGNVRYW 194
>gi|167945933|ref|ZP_02533007.1| hypothetical protein Epers_05057 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 155
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ +++ R++ ++ + TG + + + +Y E L +LN+LL D + S MDP+L D
Sbjct: 5 IGKQQERSIALHHLHTGEREKLAYWADGEYLAENLRRLNQLLRDHRTGDSTLMDPKLLDL 64
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+ +Q ++SGYR+ ++N ML ++ +A++S H+ GKA+D +PG L+ L
Sbjct: 65 LYRLQSSVGRVGEFQVISGYRSPKSNAMLRGKSNGVAKRSLHMQGKAIDVRLPGTELKEL 124
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
K A+ LK GGVG+Y S F+H+D GRVR W
Sbjct: 125 RKAALALKAGGVGFYPKSNFIHVDTGRVRFW 155
>gi|260433725|ref|ZP_05787696.1| Tat [Silicibacter lacuscaerulensis ITI-1157]
gi|260417553|gb|EEX10812.1| Tat [Silicibacter lacuscaerulensis ITI-1157]
Length = 189
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ + L ++R +++Y TG + + + +Y ++ + ++N + DW + QS
Sbjct: 27 PTYSNAAGFLRGGGDIRRIRMYSGRTGERIDMIYWVDGEYIKDAVKEINHFMRDWRTDQS 86
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++D + D + V E +LSGYR+ +TN ML RR+R +A+ S H+ G+A D
Sbjct: 87 TNIDLRTIDIMAASHNLLEVNEPYMLLSGYRSPQTNAMLRRRSRGVAKNSLHMKGQAADL 146
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ + K A+ + GGVG Y S F+H+D G VRSW
Sbjct: 147 RLASRSVSQMAKAAMACRAGGVGQYYRSNFVHMDCGDVRSW 187
>gi|294140650|ref|YP_003556628.1| hypothetical protein SVI_1879 [Shewanella violacea DSS12]
gi|293327119|dbj|BAJ01850.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 183
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ VR+L + + TG + ++ Y + LS + +L D +S+ MD +L+D
Sbjct: 32 RSTKGVRSLGFHNLHTGERGQGSYWVDGNYQNKILSNFSHILRDHRRNESVPMDKRLYDL 91
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L+++++ +V + ++SGYR+ +TN ML+ + +A+KS H+ G A+D I V+L L
Sbjct: 92 LFKLKESLNVEQEFNVISGYRSPKTNAMLAAKTSGVAKKSYHMKGMAMDIAIEDVNLSDL 151
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
AI LK GGVGYY S F+H+D G VRSW
Sbjct: 152 RDAAIELKLGGVGYYPRSGFIHVDTGPVRSWA 183
>gi|119774750|ref|YP_927490.1| hypothetical protein Sama_1613 [Shewanella amazonensis SB2B]
gi|119767250|gb|ABL99820.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 163
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 40 YHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQ 99
+ SS + + R L ++ T + + +Y +E L+ + LL D +
Sbjct: 2 FSVISSPAMASRSTQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRANI 61
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ MD +L+D L+ +Q+ + I+I+SGYR+ +TN ML++++ +A+KS H+ GKA+D
Sbjct: 62 AAPMDKRLYDLLFHLQENLKTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAID 121
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
IPG+ L L A LK GGVGYY S F+H+DVGRVRSW
Sbjct: 122 IAIPGIRLDRLRDAAKELKLGGVGYYPQSGFVHVDVGRVRSW 163
>gi|330830684|ref|YP_004393636.1| Nonpeptidase [Aeromonas veronii B565]
gi|328805820|gb|AEB51019.1| Nonpeptidase [Aeromonas veronii B565]
Length = 181
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG + ++ Y +GL++LN + D+ + ++D +LFD L+ +Q
Sbjct: 37 RELSFFNLNTGERVRASYWENGHYLSDGLAELNHIFRDYRRNEVFNIDKKLFDQLFLLQH 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I ++SGYR TN+ ++R +A+ S H LG+AVD IPGV L L K A++
Sbjct: 97 KLGRRSEIQLISGYRAPATNRQKRHKSRGVAKHSYHTLGQAVDVRIPGVQLAHLRKAALQ 156
Query: 177 LKRGGVGYYS--KFLHIDVGRVRSW 199
LK GGVGYY F+H+D G VRSW
Sbjct: 157 LKVGGVGYYPRDNFVHLDTGPVRSW 181
>gi|260428661|ref|ZP_05782640.1| Tat [Citreicella sp. SE45]
gi|260423153|gb|EEX16404.1| Tat [Citreicella sp. SE45]
Length = 189
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 16 GLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFK 75
GL + A+ VT+ + + L ++R +K+Y TG K + +
Sbjct: 13 GLLGAFAATLVTAA-----------PTYGNAAGFLRGGGDIRRIKMYSGRTGEKIDMIYW 61
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQET 135
+Y + L ++ + DW + +D + D + E ++SGYR+ +T
Sbjct: 62 IEGEYIPDALKEITYFMRDWRTNDVKHIDARTIDIMTAAHNLMDTTEPYMLISGYRSPKT 121
Query: 136 NKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDV 193
N ML R+ +A+ S+H+ G+A D ++ S+ + K A + GGVG Y S F+H+D
Sbjct: 122 NAMLRSRSSGVAKNSRHLKGEAADLHMNSRSVNQIAKAAQACRAGGVGRYTSSSFVHMDC 181
Query: 194 GRVRSW 199
G VR+W
Sbjct: 182 GPVRTW 187
>gi|145641086|ref|ZP_01796667.1| hypothetical protein CGSHiR3021_08451 [Haemophilus influenzae
R3021]
gi|148825794|ref|YP_001290547.1| hypothetical protein CGSHiEE_03725 [Haemophilus influenzae PittEE]
gi|145274247|gb|EDK14112.1| hypothetical protein CGSHiR3021_08451 [Haemophilus influenzae
22.4-21]
gi|148715954|gb|ABQ98164.1| hypothetical protein CGSHiEE_03725 [Haemophilus influenzae PittEE]
Length = 186
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAMRRRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|220920263|ref|YP_002495564.1| hypothetical protein Mnod_0216 [Methylobacterium nodulans ORS 2060]
gi|219944869|gb|ACL55261.1| protein of unknown function DUF882 [Methylobacterium nodulans ORS
2060]
Length = 510
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+ D + RTL I T A VTFKR +Y++ L QLN LL DW + MDP+
Sbjct: 68 TQDAAANGDTRTLSIIHEHTKESATVTFKRDGRYDRAALEQLNWLLRDWRIDEPTKMDPR 127
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
LFD +WE + + ++I+S YR+ +TN L RR+R +A SQH+LGKA+DF++ VS
Sbjct: 128 LFDVVWEAHRASGSRDAVHIVSAYRSPQTNAALRRRSRAVAEHSQHMLGKAMDFFLTDVS 187
Query: 167 LRSLYKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
+ + +I +R++RGGVG+Y F+H+DVG VR+W
Sbjct: 188 VDQIREIGMRMQRGGVGWYPHAYNPFVHLDVGSVRAWP 225
>gi|254465749|ref|ZP_05079160.1| Tat pathway signal sequence domain protein [Rhodobacterales
bacterium Y4I]
gi|206686657|gb|EDZ47139.1| Tat pathway signal sequence domain protein [Rhodobacterales
bacterium Y4I]
Length = 189
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S+ + L ++R +++Y TG + + + QY ++ + ++N + DW + ++
Sbjct: 30 SNAAGFLRGGGDIRRIRMYSGRTGERVDMVYWIDGQYIKDAVKEINHFMRDWRTDDVKEI 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D +
Sbjct: 90 DLRTIDIMAASHNLLDVNEPYMLLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQAADLRLA 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ + + A + GGVG Y S F+H+D G VR+W
Sbjct: 150 SRSVSQMAQAAEACRAGGVGKYQRSNFVHMDCGVVRTW 187
>gi|254453963|ref|ZP_05067400.1| twin-arginine translocation pathway signal [Octadecabacter
antarcticus 238]
gi|198268369|gb|EDY92639.1| twin-arginine translocation pathway signal [Octadecabacter
antarcticus 238]
Length = 167
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
+I S+ + L ++R LK+Y TG + Y E + ++NR DW
Sbjct: 1 MIAAPTYSNAAGFLRGGGDIRRLKMYSGRTGESIDTIYWIEGDYIPEAVDEVNRFFRDWR 60
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ Q+ +D + D + Q + ++SG+R+ +TN ML + +AR S H+ G+
Sbjct: 61 NGQTHQIDTRTIDIVAATQNLLDSSQPYTLISGFRSPQTNAMLRSNSSGVARNSLHLQGQ 120
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A D + G S+ + + A GGVG Y S F+H+D G VRSW
Sbjct: 121 AADLRMQGRSVNQMARAAASCSAGGVGRYSGSNFVHMDCGAVRSW 165
>gi|163803522|ref|ZP_02197392.1| hypothetical protein 1103602000424_AND4_00418 [Vibrio sp. AND4]
gi|159172698|gb|EDP57549.1| hypothetical protein AND4_00418 [Vibrio sp. AND4]
Length = 190
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 10 LKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQ-EEVRTLKIYVVSTGS 68
IG + S +++ + + S + +E R L + ++TG
Sbjct: 3 AARTTIGQCFVMVSRYLSRRDFLKMSAGGVVVASTLPSVSWASRADEPRVLAMNNLNTGE 62
Query: 69 KAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILS 128
+ GS Y + L +L+ D + MD +LFD + +IQ+ + ++S
Sbjct: 63 LLESCYFDGSNYVDKELKRLDNFCRDHRRNEVHPMDRRLFDQISQIQKLIGTENEVIVIS 122
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--S 186
GYR+ TN L + +A+KS H+ GKA+DF + GV L + A+ LK GGVGYY S
Sbjct: 123 GYRSPATNSSLRNSSSGVAKKSMHMEGKAIDFRLDGVKLSKVRDAALSLKAGGVGYYPRS 182
Query: 187 KFLHIDVG 194
F+HID G
Sbjct: 183 NFVHIDTG 190
>gi|209965709|ref|YP_002298624.1| hypothetical protein RC1_2427 [Rhodospirillum centenum SW]
gi|209959175|gb|ACI99811.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 219
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R+L+ + T + VT+ +Y + L +N +L DW + + D DP L D L+ +QQ
Sbjct: 74 RSLEFRHLHTNERLRVTYWSEGRYLPDALVDVNHVLRDWRTGEVGDTDPGLLDILFRMQQ 133
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
E +++ GYR +TN ML+ R+ +A KS H++GKA+D +PG L+ + ++A+
Sbjct: 134 RLRTTEPFHVICGYRCPQTNAMLASRSGGVATKSLHMVGKAIDIDVPGRQLQQIRQVALD 193
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L+ GGVGYY S F+H+D GRVR W
Sbjct: 194 LQMGGVGYYPKSGFVHVDTGRVRHW 218
>gi|254511188|ref|ZP_05123255.1| Tat pathway signal sequence domain protein [Rhodobacteraceae
bacterium KLH11]
gi|221534899|gb|EEE37887.1| Tat pathway signal sequence domain protein [Rhodobacteraceae
bacterium KLH11]
Length = 175
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S + L ++R +++Y TG + + + +Y ++ + ++N + DW + Q
Sbjct: 13 PTYSKAAGFLRGGGDIRRIRMYSGRTGERVDMVYWVDGKYIKDAVKEVNHFMRDWRNDQV 72
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
MD + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D
Sbjct: 73 KSMDLRTIDIMAAAHNMLDVSEPYMLLSGYRSPKTNAMLRSRSRGVAKNSLHMKGQAADL 132
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ + + A+ + GGVG Y S F+H+D G +R+W
Sbjct: 133 RLSSRSVSQMARAAMSCRAGGVGQYYRSNFVHMDCGDIRTW 173
>gi|260575118|ref|ZP_05843119.1| protein of unknown function DUF882 [Rhodobacter sp. SW2]
gi|259022740|gb|EEW26035.1| protein of unknown function DUF882 [Rhodobacter sp. SW2]
Length = 188
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ L ++R +++Y TG + +Y E L ++N + DW + +
Sbjct: 26 PTYSNAFGLLRGAGDIRMIRMYSGRTGESMDTIYWIEGEYIPEVLKEINHFMRDWRTDEK 85
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
I MDP+ D + + + E +LSGYR+ TN ML R+R +A+ S H++G+A D
Sbjct: 86 IKMDPRTIDIMAASHRLMDINEPYMLLSGYRSPATNAMLRSRSRGVAKHSLHMVGQAGDL 145
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ + + A GGVG Y S F+H+D G VR W
Sbjct: 146 RLKSRSVGQMARAAEACASGGVGRYSHSNFVHMDCGPVRHW 186
>gi|238897531|ref|YP_002923210.1| hypothetical protein HDEF_0299 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465288|gb|ACQ67062.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 185
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+ L + S + + + R L+I TG F G +YN++GLS+LN
Sbjct: 12 FILGGAFLGSVLLSPL-GLAASRPKPRILEINHTPTGEFIKTEFFDGRKYNKKGLSRLNY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
+ D+ + + +D QLF+ L+ +Q + I ++SGYRT++TN +L + + +A S
Sbjct: 71 IFRDFRANKLKSIDSQLFNQLYRLQNLLGTNKPIQLISGYRTKKTNNLLRKSSSAVAINS 130
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSWT 200
H LG+AVDFYI G+ L +YK A+R++ GGVGYY K F+HID G VR+W+
Sbjct: 131 FHTLGRAVDFYIEGIPLNKIYKAALRMRAGGVGYYPKSHFIHIDTGPVRNWS 182
>gi|145639177|ref|ZP_01794784.1| hypothetical protein CGSHiII_04044 [Haemophilus influenzae PittII]
gi|229845073|ref|ZP_04465209.1| hypothetical protein CGSHi6P18H1_00939 [Haemophilus influenzae
6P18H1]
gi|145271739|gb|EDK11649.1| hypothetical protein CGSHiII_04044 [Haemophilus influenzae PittII]
gi|229812045|gb|EEP47738.1| hypothetical protein CGSHi6P18H1_00939 [Haemophilus influenzae
6P18H1]
Length = 186
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFHKFYNIQTNLGLRNAEIEVICGYRSAATNAMRRRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|145629245|ref|ZP_01785044.1| hypothetical protein CGSHi22121_10595 [Haemophilus influenzae
22.1-21]
gi|260581260|ref|ZP_05849078.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260582629|ref|ZP_05850418.1| tat pathway signal sequence domain/peptidase M15 family protein
[Haemophilus influenzae NT127]
gi|144978748|gb|EDJ88471.1| hypothetical protein CGSHi22121_10595 [Haemophilus influenzae
22.1-21]
gi|260092087|gb|EEW76032.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260094301|gb|EEW78200.1| tat pathway signal sequence domain/peptidase M15 family protein
[Haemophilus influenzae NT127]
gi|309750757|gb|ADO80741.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
gi|309972940|gb|ADO96141.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 186
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|312883637|ref|ZP_07743362.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368860|gb|EFP96387.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 182
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLL 92
L+ I + + ++E R+L + + TG + G Y + + +LN L
Sbjct: 11 LAGGSIAVASCNPKALFANERESARSLAMKSLHTGECIETCYFNGRHYVESEIRKLNYLC 70
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
D+ ++ MD +LFD + IQ + + ++SGYR+ TN+ L + ++ +A++S H
Sbjct: 71 RDFRREEVTPMDKRLFDHIDGIQNLLGIQAEVLLISGYRSPATNEELRKLSKGVAKRSYH 130
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
LG+A+DF + GV L+ + A LK GG+GYY S F+HID G VR W
Sbjct: 131 TLGQAIDFRLDGVDLKQVRDAAFELKLGGLGYYPGSDFIHIDTGPVRYW 179
>gi|117619408|ref|YP_855764.1| M15 family non-peptidase protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560815|gb|ABK37763.1| nonpeptidase homolog, peptidase M15 family [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 181
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R L + ++TG + ++ +Y ++GL++LN + D+ + ++D +LFD L+ +Q
Sbjct: 37 RELSFFNLNTGERVRASYWEDGRYLKDGLAELNHIFRDYRRNEVFNIDRKLFDQLYLLQH 96
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I ++SGYR+ TN+ R+R +A+ S H LG+AVD IPGV L L K A+
Sbjct: 97 KLGRHGEIQLISGYRSPVTNRQKRSRSRAVAKHSYHTLGQAVDVRIPGVQLAHLRKAALH 156
Query: 177 LKRGGVGYYS--KFLHIDVGRVRSW 199
LK GGVGYY F+H+D G VRSW
Sbjct: 157 LKVGGVGYYPSDNFVHLDTGPVRSW 181
>gi|254476884|ref|ZP_05090270.1| Tat pathway signal sequence domain protein [Ruegeria sp. R11]
gi|214031127|gb|EEB71962.1| Tat pathway signal sequence domain protein [Ruegeria sp. R11]
Length = 210
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S+ + L ++R ++++ TG + + + +Y ++ + ++N + DW S ++
Sbjct: 51 SNAAGFLRGAGDIRRIRMFSGRTGERIDMVYWIDGKYIKDAVKEINYFMRDWRSDDVKEI 110
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D +
Sbjct: 111 DLRTIDIMAASHNLLDVNEPYMMLSGYRSPKTNAMLRSRSRGVAKNSLHMRGQAADLRLS 170
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
S+ + AI + GGVG Y S F+H+D G VRSW
Sbjct: 171 SRSVTQMANAAIACRAGGVGKYRRSNFVHMDCGVVRSWN 209
>gi|294677411|ref|YP_003578026.1| hypothetical protein RCAP_rcc01874 [Rhodobacter capsulatus SB 1003]
gi|294476231|gb|ADE85619.1| protein of unknown function DUF882 [Rhodobacter capsulatus SB 1003]
Length = 167
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
++ + S+ S L ++R + +Y TG + +Y E L ++ R + DW
Sbjct: 1 MVAAPKASNAFSFLRGAGDIRRIHMYSGRTGESLDTIYWIEGEYIPEALKEITRFMRDWR 60
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ +DP+ D + E +LSGYR+ TN ML R+ +AR S H+ G
Sbjct: 61 TNDVKTIDPRTVDIAAASHRLLDTSEPYMLLSGYRSPATNAMLRSRSGGVARNSLHMRGM 120
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A D + S+ +Y A+ GGVG Y S F+H+D G +RSW
Sbjct: 121 AADLRLKSRSVGQIYSAALSCHAGGVGKYARSDFVHMDCGNIRSW 165
>gi|16125759|ref|NP_420323.1| hypothetical protein CC_1512 [Caulobacter crescentus CB15]
gi|13422891|gb|AAK23491.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 216
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 35 PDLIKYHQQSSMSSDLLDQE--------EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLS 86
P +++++ + + + R + ++ V TG K + Y + +S
Sbjct: 39 PQATPVPPPTTVAATVASIDPPALKPAVDPRWVHLHNVHTGEKLEAVYWENGDYVPDAVS 98
Query: 87 QLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKI 146
L+++L D+ + + +D L+D L +I + ++SGYR+ TN++LS+R+ ++
Sbjct: 99 ALDKVLRDYRNDEVHPIDRGLYDLLDQIARKTQSKGPFQVISGYRSPATNRLLSKRSGEV 158
Query: 147 ARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
A+KS H+ GKA+D ++ V L+ + A+ L GGVGYY S F+H+DVG VR WT
Sbjct: 159 AKKSLHMDGKAMDIFLEDVELKHVRAAALDLSVGGVGYYPTSNFVHVDVGPVRKWT 214
>gi|170726507|ref|YP_001760533.1| hypothetical protein Swoo_2154 [Shewanella woodyi ATCC 51908]
gi|169811854|gb|ACA86438.1| protein of unknown function DUF882 [Shewanella woodyi ATCC 51908]
Length = 171
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 36 DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDW 95
+ + S VR+L + TG + ++ Y ++ LS+ + L D
Sbjct: 6 GVAMFSVIPSKVQASRSTTGVRSLGFNNLHTGERGFGSYWIDGNYQEKTLSEFSHTLRDH 65
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+S MD +L+D L++++ +V E ++SGYR+ +TN ML+ +N +A+KS H+ G
Sbjct: 66 RRNESAPMDKRLYDLLFKLKLSLNVEEDFNVISGYRSPQTNAMLASKNNGVAKKSYHMKG 125
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+D +P V+L L AI LK GGVGYY S F+H+D G VR+W
Sbjct: 126 MAMDIALPNVNLSDLRDAAIELKLGGVGYYPRSGFIHVDTGPVRTW 171
>gi|77463327|ref|YP_352831.1| hypothetical protein RSP_2773 [Rhodobacter sphaeroides 2.4.1]
gi|77387745|gb|ABA78930.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 212
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
++ L +VR +++Y TG + +Y E L ++N + DW +
Sbjct: 50 PTYANAFGFLRGAGDVRRIRMYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDV 109
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
I +D + D + + V E +LSGYR +TN ML R+ +AR S H+ G+A D
Sbjct: 110 IRIDARTVDIMAASHRLMDVSEPYMLLSGYRCPKTNAMLRSRSSGVARNSLHLKGQAADL 169
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ + K A GGVG Y S F+H+D G VR W
Sbjct: 170 RLKSRSVGQMAKAAEACASGGVGRYSRSDFVHMDCGPVRHW 210
>gi|319896896|ref|YP_004135091.1| hypothetical protein HIBPF05760 [Haemophilus influenzae F3031]
gi|317432400|emb|CBY80755.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 186
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFHKFYNIQTNLGLRNAEIEVICGYRSVATNAMRRRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|126462183|ref|YP_001043297.1| hypothetical protein Rsph17029_1415 [Rhodobacter sphaeroides ATCC
17029]
gi|221639178|ref|YP_002525440.1| hypothetical protein RSKD131_1079 [Rhodobacter sphaeroides KD131]
gi|126103847|gb|ABN76525.1| protein of unknown function DUF882 [Rhodobacter sphaeroides ATCC
17029]
gi|221159959|gb|ACM00939.1| Hypothetical Protein RSKD131_1079 [Rhodobacter sphaeroides KD131]
Length = 188
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
++ L +VR +++Y TG + +Y E L ++N + DW +
Sbjct: 26 PTYANAFGFLRGAGDVRRIRMYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDV 85
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
I +D + D + + V E +LSGYR +TN ML R+ +AR S H+ G+A D
Sbjct: 86 IRIDARTVDIMAASHRLMDVSEPYMLLSGYRCPKTNAMLRSRSSGVARNSLHLKGQAADL 145
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ + K A GGVG Y S F+H+D G VR W
Sbjct: 146 RLKSRSVGQMAKAAEACASGGVGRYSRSDFVHMDCGPVRHW 186
>gi|90579550|ref|ZP_01235359.1| hypothetical outer membrane protein [Vibrio angustum S14]
gi|90439124|gb|EAS64306.1| hypothetical outer membrane protein [Vibrio angustum S14]
Length = 185
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMS-SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+L ++ +++ + + R L I + TG + + G Y + Q++
Sbjct: 12 LALGGAVVGSCLLPNIAIASPFKASDPRNLLIRNLHTGEELETKYFNGKTYVGSAVRQID 71
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L D+ + +D +L+D + +IQ Y Y ++SGYR+ +TNKML++R+ +A+K
Sbjct: 72 HLCRDFRQNEVARIDRRLYDAISQIQTYLGHEGYAQLISGYRSPKTNKMLAKRSGGVAKK 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ +A+DF + GV L + + A+ LK GGVGYY S+F+HID G VR+W
Sbjct: 132 SYHMKAQAIDFNLEGVPLAKIRQAAMDLKIGGVGYYPGSQFVHIDTGPVRNW 183
>gi|145637695|ref|ZP_01793348.1| hypothetical protein CGSHiHH_01951 [Haemophilus influenzae PittHH]
gi|145269097|gb|EDK09047.1| hypothetical protein CGSHiHH_01951 [Haemophilus influenzae PittHH]
Length = 186
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGMSILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|68250267|ref|YP_249379.1| hypothetical protein NTHI1967 [Haemophilus influenzae 86-028NP]
gi|68058466|gb|AAX88719.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 186
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ + + I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFHKFYNIQTNLGLRDAEIEVICGYRSVATNAMRRRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|99081058|ref|YP_613212.1| twin-arginine translocation pathway signal [Ruegeria sp. TM1040]
gi|99037338|gb|ABF63950.1| Twin-arginine translocation pathway signal [Ruegeria sp. TM1040]
Length = 188
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
+ L ++R +++Y TG + + + +Y ++ + ++N + DW + Q +D
Sbjct: 30 QAAGFLRGGGDIRRIRMYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDWRNDQVKAID 89
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+ D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D +
Sbjct: 90 LRTIDIMAASSNLLEVNEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLST 149
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
++ + + A K GGVG Y S F+H+D G VRSW
Sbjct: 150 RTVSQMAQAAQACKAGGVGRYYGSNFVHMDCGVVRSW 186
>gi|255262700|ref|ZP_05342042.1| Tat [Thalassiobium sp. R2A62]
gi|255105035|gb|EET47709.1| Tat [Thalassiobium sp. R2A62]
Length = 190
Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ + L ++R +K+Y TG + + + Y + + ++N + DW + ++
Sbjct: 28 PTYSNAAGFLRGGGDIRRIKMYSGRTGERIDMIYWVDGDYIADAVKEVNFFMRDWRNSKT 87
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
I MD + D + E +LSGYR+ ETN ML RR+ +A+ S H+ G+A D
Sbjct: 88 IQMDTRTIDVMAASHNLMDTSEPYMLLSGYRSPETNAMLRRRSSGVAKNSLHMRGQAADI 147
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
+ S+ + + A R GGVG YS F+H+D G VRSW
Sbjct: 148 RLSSRSVSQMARAAQRCSGGGVGRYSGANFVHMDCGPVRSW 188
>gi|254440342|ref|ZP_05053836.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198255788|gb|EDY80102.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 189
Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ + L ++R LK+Y TG + Y E ++++NR DW + Q+
Sbjct: 27 PTYSNAAGFLRGGGDIRRLKMYSGRTGESIDTIYWIEGDYIPEAMTEMNRFFRDWRNGQT 86
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ +D + D Q + ++SGYR+ +TN ML + +AR S H+ G+A D
Sbjct: 87 LQIDTRTIDIAAATQNLLDSSQPYTLISGYRSPQTNAMLRSNSSGVARNSLHLQGQAADL 146
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ G S+ + + A GGVG Y S F+HID G VRSW
Sbjct: 147 RMQGRSVSQMARAAASCNAGGVGRYSGSNFIHIDCGAVRSW 187
>gi|145631484|ref|ZP_01787253.1| hypothetical protein CGSHi22421_02476 [Haemophilus influenzae
R3021]
gi|145634470|ref|ZP_01790180.1| hypothetical protein CGSHiAA_06754 [Haemophilus influenzae PittAA]
gi|144982914|gb|EDJ90427.1| hypothetical protein CGSHi22421_02476 [Haemophilus influenzae
R3021]
gi|145268450|gb|EDK08444.1| hypothetical protein CGSHiAA_06754 [Haemophilus influenzae PittAA]
Length = 186
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFHKFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|330722117|gb|EGH00027.1| exported protein [gamma proteobacterium IMCC2047]
Length = 186
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
+ SS + L R L+ Y + TG TF + ++ L +N LL
Sbjct: 17 GGLTVGLAVSSSAFAKLSAAPVERHLQFYNLHTGESLNTTFCVDGVFVEDSLRDINTLLR 76
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D + + MDPQL L +++ + +I+SGYR+ TN MLS ++ +A+KS H+
Sbjct: 77 DHRTGEVCVMDPQLLILLDDLKTLMGNKQPFHIVSGYRSPATNNMLSAQSNGVAKKSLHM 136
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GKA+D +PGV +R+L K A+ LK GGVG Y S F+H+DVGRVR W
Sbjct: 137 QGKAIDVRVPGVDVRALQKSALALKGGGVGLYTRSDFVHLDVGRVRYW 184
>gi|319776087|ref|YP_004138575.1| hypothetical protein HICON_14360 [Haemophilus influenzae F3047]
gi|329123251|ref|ZP_08251819.1| protein of hypothetical function DUF882 [Haemophilus aegyptius ATCC
11116]
gi|317450678|emb|CBY86898.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471460|gb|EGF16908.1| protein of hypothetical function DUF882 [Haemophilus aegyptius ATCC
11116]
Length = 186
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSAPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFHKFYNIQTNLGLRNAEIEVICGYRSVATNAMRRRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|86138267|ref|ZP_01056841.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. MED193]
gi|85824792|gb|EAQ44993.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. MED193]
Length = 181
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S + L ++R ++++ TG + + + Y ++ + ++N + DW + Q +
Sbjct: 22 SQAAGFLRGGGDIRRIRMFSGRTGERIDMIYWIDGDYIKDAVKEINYFMRDWRTDQVKSI 81
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D +
Sbjct: 82 DLRTIDIMAASHNLLDVSEPYMMLSGYRSPQTNAMLRSRSRGVAKNSLHMRGQAADLRLS 141
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
S+ + A + GGVG Y S F+H+D G VRSW+
Sbjct: 142 SRSVSQMANAAKACRAGGVGKYRGSNFVHMDCGVVRSWS 180
>gi|145633342|ref|ZP_01789073.1| hypothetical protein CGSHi3655_03896 [Haemophilus influenzae 3655]
gi|229846897|ref|ZP_04467004.1| hypothetical protein CGSHi7P49H1_02713 [Haemophilus influenzae
7P49H1]
gi|144986188|gb|EDJ92778.1| hypothetical protein CGSHi3655_03896 [Haemophilus influenzae 3655]
gi|229810386|gb|EEP46105.1| hypothetical protein CGSHi7P49H1_02713 [Haemophilus influenzae
7P49H1]
Length = 186
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFHKFYNIQTNLGLRNAQIEVICGYRSAATNAMRHRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I GV L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIAGVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|257095731|ref|YP_003169372.1| hypothetical protein CAP2UW1_4202 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048255|gb|ACV37443.1| protein of unknown function DUF882 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 185
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
+I L + R L+ TG + V F G +Y +GL +LN L D +
Sbjct: 20 VIAGAITPLTRPALAALPQARRLEFDHTHTGERLSVVFAVGDRYVDDGLRKLNHFLRDHY 79
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR-NRKIARKSQHVLG 155
S + +DPQLFD L+E ++ + ++SGYR TN L +AR+S H+ G
Sbjct: 80 SGEVGSIDPQLFDLLFETRRELGCTQPFEVISGYRCAATNTRLRNSGGGGVARQSLHMEG 139
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A+D I GV L + A+ L+ GGVG+Y SKF+H+D G+VR W
Sbjct: 140 RAIDIRIDGVPLADVRDAAMSLQAGGVGFYPRSKFVHLDTGKVRYW 185
>gi|325981932|ref|YP_004294334.1| hypothetical protein NAL212_1269 [Nitrosomonas sp. AL212]
gi|325531451|gb|ADZ26172.1| protein of unknown function DUF882 [Nitrosomonas sp. AL212]
Length = 197
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ L+ ++ + + + L + TG + TF +Y EG+ +N
Sbjct: 24 TGLSTCTLLALPMAATSVHAAIKKPLEKKLSFLNLHTGERTRATFWANGRYIPEGMRAIN 83
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
++L D + +DP LFDFL +Q + +++S YR+ TN L+ ++ +A+
Sbjct: 84 QVLRDHRTGDRYKIDPTLFDFLHLLQHKLRTHQEFHVISAYRSPATNAKLAAQSGGVAKN 143
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H GKA+D +PG L L A+ L+ GGVGYY S F+H+D G R W
Sbjct: 144 SLHTHGKAIDIRLPGRKLSDLRSAALSLQIGGVGYYPSSNFVHLDTGNYRFW 195
>gi|148827092|ref|YP_001291845.1| hypothetical protein CGSHiGG_02055 [Haemophilus influenzae PittGG]
gi|148718334|gb|ABQ99461.1| hypothetical protein CGSHiGG_02055 [Haemophilus influenzae PittGG]
gi|301170423|emb|CBW30029.1| conserved protein [Haemophilus influenzae 10810]
Length = 186
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R +A+
Sbjct: 72 LMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I V L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIKGKAIDFRIADVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 183
>gi|23013109|ref|ZP_00053051.1| COG3108: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 182
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 28 SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
L S+ + + R + +Y TG + +Y + ++Q
Sbjct: 9 RGFLGLGLSAAATLVISNPVEAAVRRLPERQIHLYNTHTGESLKSIYWAEGRYQTKSIAQ 68
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
++R L D + Q MDP+L D + +Q+ I+I+ GYR+ TN +++ + +A
Sbjct: 69 ISRFLRDHRNGQVHPMDPKLLDMMNSVQRKVGAKGPIHIICGYRSPATNAIMASLSDGVA 128
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+S H GKAVD +PG + R + K A+ LK GGVG Y S F+HID GRVR+W
Sbjct: 129 TQSLHTQGKAVDIRLPGHATRHVGKAALSLKAGGVGMYPESDFVHIDTGRVRTW 182
>gi|221234517|ref|YP_002516953.1| M15 superfamily membrane peptidase [Caulobacter crescentus NA1000]
gi|220963689|gb|ACL95045.1| M15 superfamily membrane peptidase [Caulobacter crescentus NA1000]
Length = 151
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R + ++ V TG K + Y + +S L+++L D+ + + +D L+D L +I
Sbjct: 2 DPRWVHLHNVHTGEKLEAVYWENGDYVPDAVSALDKVLRDYRNDEVHPIDRGLYDLLDQI 61
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+ ++SGYR+ TN++LS+R+ ++A+KS H+ GKA+D ++ V L+ + A
Sbjct: 62 ARKTQSKGPFQVISGYRSPATNRLLSKRSGEVAKKSLHMDGKAMDIFLEDVELKHVRAAA 121
Query: 175 IRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+ L GGVGYY S F+H+DVG VR WT
Sbjct: 122 LDLSVGGVGYYPTSNFVHVDVGPVRKWT 149
>gi|251792220|ref|YP_003006941.1| twin-arginine translocation pathway signal [Aggregatibacter
aphrophilus NJ8700]
gi|247533608|gb|ACS96854.1| twin-arginine translocation pathway signal [Aggregatibacter
aphrophilus NJ8700]
Length = 186
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ + R L ++TG K F G ++ L L+
Sbjct: 12 LSLGGIVLGAALLPDTVLAAVSTPRPRMLSFRNINTGEKLSAEFAFGRGFSVNTLRLLDH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
L D + Q MDPQLF + +QQ + I I+ GYR+ +N + RR+R +A
Sbjct: 72 FLRDKRTNQVHKMDPQLFTKFYRVQQQLGLRNTEIQIICGYRSAASNAAMHRRSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
S H+ G+A+DF I GV L L L+ GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHIRGQAIDFRIDGVPLAKLRNTVESLQDGGVGYYPRSNFVHMDTGPVRTWN 184
>gi|146277081|ref|YP_001167240.1| hypothetical protein Rsph17025_1034 [Rhodobacter sphaeroides ATCC
17025]
gi|145555322|gb|ABP69935.1| protein of unknown function DUF882 [Rhodobacter sphaeroides ATCC
17025]
Length = 188
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S L +VR +++Y TG + +Y E L ++N + DW +
Sbjct: 26 PTYSHAFGFLRGAGDVRRIRMYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDI 85
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+DP+ D + + V E +LSGYR+ +TN ML ++ +AR S H+ G+A D
Sbjct: 86 TRIDPRAVDIMAASHRLMDVSEPYMLLSGYRSPKTNAMLRSQSSGVARNSLHLRGQAADL 145
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ + K A GGVG Y S F+H+D G VR W
Sbjct: 146 RLKSRSVGQMAKAAEACASGGVGRYSRSDFVHMDCGPVRHW 186
>gi|110679846|ref|YP_682853.1| hypothetical protein RD1_2617 [Roseobacter denitrificans OCh 114]
gi|109455962|gb|ABG32167.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 189
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 16 GLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFK 75
L + A+ VT+ S+ + L ++R +++Y TG + + +
Sbjct: 13 ALLGAFAATMVTAA-----------PTFSNAAGFLRGSGDIRRIRMYSGRTGERIDMIYW 61
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQET 135
+Y E + ++N + DW + MD + D + E +LSGYR+ +T
Sbjct: 62 IEGEYVPEAVKEVNHFMRDWRTDGVKSMDLRTIDIMSAAHNLMDADEPYMLLSGYRSPQT 121
Query: 136 NKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDV 193
N ML R+R +A+ S HV G+A D + ++ + + A K GGVG Y S F+H+D
Sbjct: 122 NAMLRSRSRGVAKNSLHVKGQAADLRLSTRTVSQMARAAAACKGGGVGKYSRSNFVHMDC 181
Query: 194 GRVRSW 199
G VR+W
Sbjct: 182 GVVRTW 187
>gi|126737822|ref|ZP_01753552.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. SK209-2-6]
gi|126721215|gb|EBA17919.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. SK209-2-6]
Length = 189
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S + L ++R +++Y TG + + + Y ++ + ++N + DW + Q +
Sbjct: 30 SKAAGFLRGGGDIRRIRMYSGRTGERLDMIYWIDGDYIKDAVREVNYFMRDWRTDQIKSI 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D +
Sbjct: 90 DLRTIDIMAASHNLLDVSEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLA 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ + + A + GGVG Y S F+H+D G VRSW
Sbjct: 150 SRSVSQMARAAQACRAGGVGKYSRSNFVHMDCGIVRSW 187
>gi|330445734|ref|ZP_08309386.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489925|dbj|GAA03883.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 185
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMS-SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+L ++ +++ + + R + I + TG + + G Y + +++
Sbjct: 12 LALGGAVVGSCLLPNIAIASPFKASDPRNMLIRNLHTGEELETKYFNGKTYVGSAVRKID 71
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
+ D+ + +D +L+D + +IQ Y Y+ ++SGYR+ +TNKML++R+ +A+K
Sbjct: 72 HICRDFRQNEVARIDRRLYDAISQIQTYVGHEGYVQLISGYRSPKTNKMLAKRSGGVAKK 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ +A+DF + GV L + K A+ L GGVGYY S+F+HID G VR+W
Sbjct: 132 SYHMTAQAIDFNLEGVPLSKIRKAAMDLNIGGVGYYPGSQFVHIDTGPVRNW 183
>gi|241767411|ref|ZP_04765114.1| protein of unknown function DUF882 [Acidovorax delafieldii 2AN]
gi|241361826|gb|EER58082.1| protein of unknown function DUF882 [Acidovorax delafieldii 2AN]
Length = 188
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ + S L+ L +Q R+L T + + + G + + L+ LN
Sbjct: 16 LGAGSRWLMTGALLPLAQPALANQPGARSLSFDHTHTSERLALVYALGDAFVPQALTSLN 75
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR-RNRKIAR 148
L D +S ++ MDPQLF+ L +I+Q V + ++SGYR+ TN+ L R +A+
Sbjct: 76 HFLRDHYSGEAGVMDPQLFNLLHQIRQELRVQQPFQVISGYRSPATNQTLRATRGGGVAK 135
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
S H+ GKA+D +PGV L SL A+ L GGVG+Y +F+H+D G VR W
Sbjct: 136 HSLHMDGKAIDVRLPGVPLASLRDAALSLGAGGVGFYPREQFVHVDTGPVRRW 188
>gi|288957910|ref|YP_003448251.1| hypothetical protein AZL_010690 [Azospirillum sp. B510]
gi|288910218|dbj|BAI71707.1| hypothetical protein AZL_010690 [Azospirillum sp. B510]
Length = 209
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 12/187 (6%)
Query: 15 IGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
G+ +A+ VT+P+ ++ ++ L VR + ++ ++T + +
Sbjct: 33 SGIATGLATSVVTAPVL--------LGAGTAEAAPLA--GGVRRISLHNINTQERFDGVY 82
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
QY E L +L+ LL D +KQ DP+LFD L + Q + ++ GYR++
Sbjct: 83 WADGQYKPEVLRKLDVLLRDHRAKQVCRYDPRLFDLLARVHQSVGSDDPFEVICGYRSRR 142
Query: 135 TNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHID 192
TN M RR+R +A++S H G A+D +P LR++ + A ++ GGVGYY S F+H+D
Sbjct: 143 TNAMARRRSRGVAKESYHTRGMAIDIRLPDTQLRAISETAKGMQSGGVGYYPRSGFVHLD 202
Query: 193 VGRVRSW 199
VG VRSW
Sbjct: 203 VGPVRSW 209
>gi|56696801|ref|YP_167163.1| Tat pathway signal sequence domain-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678538|gb|AAV95204.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Ruegeria pomeroyi DSS-3]
Length = 201
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S + L ++R +++Y TG + + + Y ++ + ++N + DW Q M
Sbjct: 42 SMAAGFLRGGGDIRRIRMYSGRTGERIDMVYWIDGDYIKDAVKEINYFMRDWRVDQVKSM 101
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + V E +LSGYR+ +TN ML R+R +AR S H+ G+A D +
Sbjct: 102 DLRTVDIMAAAHNLMDVNEPYMLLSGYRSPQTNAMLRSRSRGVARNSLHMQGQAADLRLA 161
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ + AI + GGVG Y S F+H+D G VRSW
Sbjct: 162 SRSVSQMANAAIACRAGGVGKYYRSNFVHMDCGEVRSW 199
>gi|113866567|ref|YP_725056.1| hypothetical protein H16_A0538 [Ralstonia eutropha H16]
gi|113525343|emb|CAJ91688.1| Uncharacterized protein conserved in bacteria [Ralstonia eutropha
H16]
Length = 195
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSS-----DLLDQEEVRTLKIYVVSTGSKAIVTFKRGS 78
F T+ +L+ L+ + +++ L + RTL TG + + + G
Sbjct: 12 FLHTAGGLALAAGLMPLAPRQALAGLPANRALAGLPDARTLAFDHTHTGERVSLVYAVGD 71
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
++ + L+ LN L D +S + +DPQLFD L+++++ + ++SGYR+ TN
Sbjct: 72 RFVPDALTTLNGFLRDHYSGKVGMIDPQLFDLLFQVRRELGTDQPFQVISGYRSPTTNSR 131
Query: 139 LSR-RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGR 195
L R +AR S H+ GKA+D + GV L + A L+ GGVG+Y +F+HID GR
Sbjct: 132 LRNTRGGGVARHSLHMDGKAIDIRLAGVPLADVRDAAKSLQGGGVGFYESDQFVHIDTGR 191
Query: 196 VRSW 199
VR W
Sbjct: 192 VRYW 195
>gi|254490599|ref|ZP_05103785.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224464343|gb|EEF80606.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 195
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 10 LKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSK 69
K+I G + + + + + +++L Q E R++ + + TG
Sbjct: 3 AKIIRKGRAIDSETCQFRRRLLQIGIGATASLAMPNAFANMLKQPE-RSIALLNLHTGEH 61
Query: 70 AIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSG 129
T+ QY L+ +NR+L D + D+D L + L + + +++SG
Sbjct: 62 VKATYWAEGQYQSSELAAINRVLRDHRTGDINDIDSNLIEMLNLLHHKMLGKQPFHVISG 121
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SK 187
YR+ +TN +L + + +A+KS H+ GKA+D +PG L L K A+ LK GGVGYY S
Sbjct: 122 YRSPKTNALLRQNSDGVAKKSLHMQGKAIDVRLPGRELNELQKSALNLKVGGVGYYPGSD 181
Query: 188 FLHIDVGRVRSW 199
F+HID GRVR+W
Sbjct: 182 FIHIDTGRVRNW 193
>gi|188995994|ref|YP_001930245.1| protein of unknown function DUF882 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931061|gb|ACD65691.1| protein of unknown function DUF882 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 179
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 55 EVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
+ R L Y TG F +YN+EGL + +L D+ + + ++D +L D L+ +
Sbjct: 32 QARILYFYNTHTGEFLKEIFYENGRYNEEGLKNIFYILRDFRTNEIAEIDIKLIDTLYIL 91
Query: 115 QQYFSVP-EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
+ V I I+SGYR+ +TN +L + +A+ S H+ GKA+D I GV L L
Sbjct: 92 TKTLEVNNRPINIISGYRSPKTNNLLRELSSGVAKNSLHMQGKAIDINISGVPLHILRDA 151
Query: 174 AIRLKRGGVGYY--SKFLHIDVGRVRSW 199
AI LK GGVGYY S F+HID GR+R W
Sbjct: 152 AISLKAGGVGYYLSSNFVHIDTGRIRYW 179
>gi|307825668|ref|ZP_07655885.1| protein of unknown function DUF882 [Methylobacter tundripaludum
SV96]
gi|307733245|gb|EFO04105.1| protein of unknown function DUF882 [Methylobacter tundripaludum
SV96]
Length = 234
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
+ + L + TG + +T+ +Y ++ L ++N L D+H +DP L D
Sbjct: 82 RNSPSHKMLAFHNTHTGDQLNLTYFEEGRYIKDALHEINHLFRDYHDGTVHPIDPALLDQ 141
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L++++ V + +I+SGYR+ TN L + + +A+ S H+ G+A+D I G+ R +
Sbjct: 142 LYDLKHTLEVRKPFHIVSGYRSPATNADLRKHSDGVAKNSLHMEGRAIDIRIEGLDTRRI 201
Query: 171 YKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
A+ ++RGGVGYY S F+H+D G +R+W
Sbjct: 202 RNAALAMQRGGVGYYGRSDFVHLDTGSIRTWA 233
>gi|15602136|ref|NP_245208.1| hypothetical protein PM0271 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720502|gb|AAK02355.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 186
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ S + + R L+ ++TG K F ++ L +L+
Sbjct: 12 LSLGGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKGFSSVALKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + MDP+LF + +Q + I I+ GYR+ +N + RR+R +A
Sbjct: 72 LMRDKRNNHMHRMDPKLFLKFYRLQASLGLRNTEIQIICGYRSPVSNAAMHRRSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF I GV L L + A +L GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHTRGQAIDFRIDGVPLAKLRQAAEKLNNGGVGYYPRSNFIHVDTGPVRTW 183
>gi|89073968|ref|ZP_01160474.1| hypothetical outer membrane protein [Photobacterium sp. SKA34]
gi|89050296|gb|EAR55800.1| hypothetical outer membrane protein [Photobacterium sp. SKA34]
Length = 185
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMS-SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+L ++ +++ + + R L I + T + + G Y + Q++
Sbjct: 12 LALGGAVVGSCLLPNIAIASRFKASDPRNLLIRNLHTSEELETKYFNGKTYVGSAVRQID 71
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L D+ + +D +L+D + +IQ Y Y + SGYR+ +TNKML++R+ +A+K
Sbjct: 72 HLCRDFRQNEVARIDRRLYDAISQIQAYLGHEGYAQLFSGYRSPKTNKMLAKRSGGVAKK 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ +A+DF + GV L + + A+ LK GGVGYY S+F+HID G VR+W
Sbjct: 132 SYHMKAQAIDFNLEGVPLSKIRQAAMDLKIGGVGYYPGSQFVHIDTGPVRNW 183
>gi|167645746|ref|YP_001683409.1| hypothetical protein Caul_1782 [Caulobacter sp. K31]
gi|167348176|gb|ABZ70911.1| protein of unknown function DUF882 [Caulobacter sp. K31]
Length = 225
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 29 PIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQL 88
P L+ + R LK++ + T K + +Y + + L
Sbjct: 52 PAEGLAAQAAPVATPVASVGPAAHA--PRWLKLHNIHTQEKLEAVYFEKGEYVPDAVQAL 109
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
+++L D+ + M P+LFD L ++ + + ++SGYR+ +TN ML R+ ++A+
Sbjct: 110 DKVLRDYRTGDVYSMHPELFDTLADLARKTETKAHFQVISGYRSPKTNAMLHERSGQVAK 169
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+S H+ GKA+D Y+ V+L + A+ + RGGVGYY S F+H+DVG VR W
Sbjct: 170 RSLHMDGKAIDIYLEDVALDRVRAAALDVGRGGVGYYPVSNFVHVDVGPVRRW 222
>gi|325578155|ref|ZP_08148290.1| hypothetical protein HMPREF9417_1031 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159891|gb|EGC72020.1| hypothetical protein HMPREF9417_1031 [Haemophilus parainfluenzae
ATCC 33392]
Length = 186
Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ S ++ + R L Y V+T + F + +N+ L +L+
Sbjct: 12 LSLGGIVLGASMMPSTVLAMVSTPKPRILSFYNVNTNERLSGEFSATTGFNRSMLGKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
+ D + Q MDP LF +++Q I ++ GYR+ TN M R++R +A
Sbjct: 72 FMRDRRTDQVHRMDPSLFMKFYQLQSDLGLRTAQIDVICGYRSAATNAMRRRQSRDVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY--YSKFLHIDVGRVRSW 199
S H+ G+A+DF IPGV L L + A L GGVGY YS F+H+D G VR+W
Sbjct: 132 SYHIKGQAIDFKIPGVPLARLRQAAENLDSGGVGYYPYSNFIHVDTGPVRTW 183
>gi|83311305|ref|YP_421569.1| hypothetical protein amb2206 [Magnetospirillum magneticum AMB-1]
gi|82946146|dbj|BAE51010.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 151
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + +Y TG + Y + ++Q++R L D + Q +DP+LFD + +Q+
Sbjct: 7 RQIHLYNTHTGETLKSVYWAEGHYQTKSIAQISRFLRDHRNGQVHPIDPKLFDLMNSVQR 66
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
I+I+ GYR+ TN +++ + +A +S H GKAVD +PG + R + + A+
Sbjct: 67 KVGGKGPIHIICGYRSPSTNAIMASLSDGVATQSLHTQGKAVDIRLPGHATRHVGRAALS 126
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
LK GGVG Y S F+HID GRVR+W
Sbjct: 127 LKAGGVGMYPESDFVHIDTGRVRTW 151
>gi|83942463|ref|ZP_00954924.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. EE-36]
gi|83846556|gb|EAP84432.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. EE-36]
Length = 181
Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 48 SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQL 107
L ++R +K+Y TG + + + Y ++ +S+LN + DW + MD +
Sbjct: 26 GFLRGAGDIRRIKMYSGRTGERIDMIYWIEGNYIKDAVSELNYFMRDWRTDGVKSMDLRT 85
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+
Sbjct: 86 VDIMAASHNLLDVSEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHMRGQAADLRLASRSV 145
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + AI GGVG Y S F+H+D G+VR+W
Sbjct: 146 NQMARAAIACNGGGVGRYSGSNFVHMDCGQVRNW 179
>gi|300024144|ref|YP_003756755.1| hypothetical protein Hden_2638 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525965|gb|ADJ24434.1| protein of unknown function DUF882 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 514
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 28 SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
S + L + S Q RT+ Y + T + VT+KRG+QY+ L Q
Sbjct: 6 SGVVFGVAALFAAACLHADSITAAGQANERTISFYHIHTHERLTVTYKRGTQYDPAALKQ 65
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
+N ++ DW + ++ P D WE+ + E I I+ G+R+ TN+ML + A
Sbjct: 66 INWIMRDWRKNEVKEISPATIDLAWEMHEELGSKEPISIICGFRSSGTNEMLRQTRGGQA 125
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS----KFLHIDVGRVRSWT 200
+ SQH+ GKA+D P V L+ + A+ +RGGVGYY F+H+D VR W
Sbjct: 126 KASQHITGKAIDITFPDVPLKKMRYSALIRERGGVGYYPTSGIPFVHVDTANVRMWP 182
>gi|256830356|ref|YP_003159084.1| hypothetical protein Dbac_2591 [Desulfomicrobium baculatum DSM
4028]
gi|256579532|gb|ACU90668.1| protein of unknown function DUF882 [Desulfomicrobium baculatum DSM
4028]
Length = 184
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLL 92
L+ I + + L Q R+L T K + + G +Y E L +LN LL
Sbjct: 15 LAAAGIVLSAAPAALAALPSQTGARSLAFEHTHTREKLRIVYAVGDKYVPEALKKLNHLL 74
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR-KIARKSQ 151
D +S Q MDP+LFD+L+ ++Q ++SGYR TN L +++R +A++S
Sbjct: 75 RDHYSGQVCRMDPKLFDYLFRLKQTLGSDAPFQVISGYRCPATNTKLRQKSRGGVAKRSL 134
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
H+ GKA+D I GVSL L A +RGGVG+Y KF+H+D G VRSW
Sbjct: 135 HMEGKALDIRISGVSLHDLRDAAKASRRGGVGFYPQDKFVHVDTGAVRSW 184
>gi|288957781|ref|YP_003448122.1| hypothetical protein AZL_009400 [Azospirillum sp. B510]
gi|288910089|dbj|BAI71578.1| hypothetical protein AZL_009400 [Azospirillum sp. B510]
Length = 236
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
+ R L + + TG K + +Y ++ + +N LL D + +DP+L D +
Sbjct: 87 RAPPRVLSLVNLHTGEKINAEYWSKGKYVRDAMRAVNHLLRDHRNNSVHQIDPKLLDLVH 146
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRR-NRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
+ + I I+SGYR+ ETN +L + +A+ S H+ G A+D +P +S R L
Sbjct: 147 ALSRKIGRKGPIEIVSGYRSPETNALLREADHSGVAQNSYHMRGMAIDLRMPNLSTRQLQ 206
Query: 172 KIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A+ L+ GGVGYY S F+H+DVG +R W
Sbjct: 207 RAALSLRGGGVGYYPDSNFVHVDVGPLRHW 236
>gi|30250491|ref|NP_842561.1| hypothetical protein NE2572 [Nitrosomonas europaea ATCC 19718]
gi|30139332|emb|CAD86484.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 193
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Query: 36 DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDW 95
L+ ++ S + + + + + + TG + + +Y E L + ++L D
Sbjct: 32 ALLAMPAANAAYSRVYE----KRVSLLNLHTGERVRTAYWERGKYIPEALRMIEKVLRDH 87
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
S +DP+L D + + + ++SGYR+ TN LS ++ +A+ S H+ G
Sbjct: 88 RSGDIHRIDPRLLDLMQHLHHKTGNSKEFQVVSGYRSPATNAALSVQSHGVAKNSLHMQG 147
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
KA+D +PGV L L + A+ + GGVGYY S F+HID G VR W
Sbjct: 148 KAIDIRLPGVPLHVLRRAAMSMHAGGVGYYPKSNFIHIDTGNVRYW 193
>gi|159044169|ref|YP_001532963.1| hypothetical protein Dshi_1620 [Dinoroseobacter shibae DFL 12]
gi|157911929|gb|ABV93362.1| hypothetical protein Dshi_1620 [Dinoroseobacter shibae DFL 12]
Length = 189
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ L ++R LK++ TG + + +Y +E L ++N + DW
Sbjct: 27 PVYSNAFGFLRGGGDIRRLKMHSGRTGERIDTIYWVEGKYVKEALKEINYFMRDWRRDAV 86
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+D + D + V E +LSGYR+ +TN ML R+R +A+ S H+ G+A D
Sbjct: 87 APIDRRTIDIMAAAHNMLDVDEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMQGQAADL 146
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+ S+R + A K GGVG YS F+H+D G VR W
Sbjct: 147 RLGSRSVRQIAAAAAACKAGGVGKYSGSQFVHMDCGPVRVW 187
>gi|322433931|ref|YP_004216143.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX9]
gi|321161658|gb|ADW67363.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX9]
Length = 204
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Query: 42 QQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSI 101
++ + L E L ++ + TG V ++ G Y E +++LN L D +
Sbjct: 34 GNTANGTHTLASAEQYVLHLHHLHTGESLDVVYRIGDTYVPEAMAKLNYFLRDHRTNDVS 93
Query: 102 DMDPQLFDFLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNR--KIARKSQHVLGKAV 158
DP+ FD L E+ + I I+ GYRT +N L R+ +A+ SQH+L KA+
Sbjct: 94 SYDPKEFDTLHELMAKLGRGNQTIDIVCGYRTPWSNNFLRTRSSVTGVAQHSQHMLAKAI 153
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
D +PGV R+L +A+ L GGVGYY S+F+H+DVG VR W
Sbjct: 154 DIRVPGVQTRTLRDMALSLHAGGVGYYPVSQFVHVDVGPVRQWA 197
>gi|56477064|ref|YP_158653.1| hypothetical protein ebA2889 [Aromatoleum aromaticum EbN1]
gi|56313107|emb|CAI07752.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 184
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQE 83
F S +++ + + + +S S + R+L TG + V + G +Y E
Sbjct: 11 FLRQSARLAVAGAALPFARSASASVR-----DARSLAFDHTHTGERVSVVYAVGERYVPE 65
Query: 84 GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR-R 142
L++LNR + D +S + MDP+LFD L+ ++ E ++SGYR TN L R
Sbjct: 66 ALTKLNRFMRDHYSGEVGHMDPKLFDLLYRLKLTLGSRESFQVISGYRCPTTNSTLRNTR 125
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
+A++S H+ GKA+D I L L A+ L GGVGYY +F+H+D GRVRSW
Sbjct: 126 GGGVAKRSLHMDGKAIDVRIADTPLADLRDAALSLGVGGVGYYPHDQFVHLDTGRVRSW 184
>gi|94312744|ref|YP_585953.1| twin-arginine translocation (TAT) pathway signal protein
[Cupriavidus metallidurans CH34]
gi|93356596|gb|ABF10684.1| twin-arginine translocation (TAT) pathway signal protein
[Cupriavidus metallidurans CH34]
Length = 203
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 14 WIGLYVSVASFFVTSPIY-SLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIV 72
GL + +++ + + +PD +++ S + R+L + TG +
Sbjct: 16 ASGLILGTGIAALSTGVARANTPDNTP---ENTPDSGPGNPPNARSLSFHHTHTGENISL 72
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRT 132
+ GS+ + LNR L D +S +DPQLF L+ +++ ++SGYR+
Sbjct: 73 VYAMGSEVLPQAQLALNRFLRDHYSGSVGAIDPQLFGLLFSLRRELETDTPFQVISGYRS 132
Query: 133 QETNKMLSR-RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FL 189
TN L R +A+ S H+ G A+D +PGVSL L A LK GGVG+Y + F+
Sbjct: 133 PATNTRLRNTRGGGVAKHSLHMDGMAIDIRLPGVSLADLRDAATSLKIGGVGFYQQEDFV 192
Query: 190 HIDVGRVRSW 199
H+D GRVR W
Sbjct: 193 HVDTGRVRHW 202
>gi|170717816|ref|YP_001784878.1| hypothetical protein HSM_1558 [Haemophilus somnus 2336]
gi|168825945|gb|ACA31316.1| protein of unknown function DUF882 [Haemophilus somnus 2336]
Length = 187
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
++ LS L+ + + + L ++TG + F ++ L
Sbjct: 12 LSLGGIILSAALLPQSVLAVLPKPSKS----KFLSFRNINTGERFRGEFFANKGFSSSDL 67
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNR 144
+++ L+ D + Q MDP+LF IQ + I I+ GYR+ +N + R R
Sbjct: 68 KKIDHLMRDKRNNQIHKMDPKLFHKFVHIQNNLGLQNSEIQIICGYRSPASNSAMLRSGR 127
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+AR S H G+A+DF I GVSL L + A LK GGVGYY S F+H+D G VR+W
Sbjct: 128 GVARNSYHTRGQAIDFRIEGVSLAKLRQTAENLKNGGVGYYPRSNFIHVDTGPVRTW 184
>gi|144899602|emb|CAM76466.1| Protein of unknown function DUF882, bacterial [Magnetospirillum
gryphiswaldense MSR-1]
Length = 187
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+S + R L +Y + TG + +Y + LSQ++R
Sbjct: 17 LGAGIGAAATLALTSPLEAAVRAMPERALNLYNIHTGEWVKTVYWADGRYIAKSLSQISR 76
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
LL D S + +DP+L D + + I+I+SGYR+ TN ML+ +A+ S
Sbjct: 77 LLRDHRSGDTHPVDPRLLDVMAATHRRLGAKGAIHIVSGYRSPTTNAMLAAATDGVAQGS 136
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+ GKAVD IPG + R + + A LK GGVG Y SKF+H+D GRVR W
Sbjct: 137 LHMSGKAVDIRIPGATTRVVGRAAKSLKVGGVGTYPGSKFVHLDTGRVRFW 187
>gi|113461216|ref|YP_719285.1| hypothetical protein HS_1073 [Haemophilus somnus 129PT]
gi|112823259|gb|ABI25348.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 187
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
++ L L+ + + + L ++TG + F ++ L
Sbjct: 12 LSLGGIILGAALLPQSVLAVLPKPSKS----KFLSFRNINTGERFRGEFFANKGFSSSDL 67
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV-PEYIYILSGYRTQETNKMLSRRNR 144
+++ L+ D + Q MDP+LF IQ + I I+ GYR+ +N + R R
Sbjct: 68 KKIDHLMRDKRNNQIHKMDPKLFHKFVHIQNNLGLQNSEIQIICGYRSPASNSAMLRSGR 127
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+AR S H G+A+DF I GVSL L + A LK GGVGYY S F+H+D G VR+W
Sbjct: 128 GVARNSYHTRGQAIDFRIEGVSLAKLRQTAENLKNGGVGYYPRSNFIHVDTGPVRTW 184
>gi|254487415|ref|ZP_05100620.1| Tat pathway signal sequence domain protein [Roseobacter sp. GAI101]
gi|214044284|gb|EEB84922.1| Tat pathway signal sequence domain protein [Roseobacter sp. GAI101]
Length = 181
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 48 SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQL 107
L ++R +K++ TG + + + Y + + ++N + DW + +D +
Sbjct: 26 GFLRGAGDIRRIKMFSGRTGERIDMIYWIEGDYVADAVKEVNHFMRDWRTDGIKSIDLRT 85
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
D + V E +LSGYR+ +TN ML ++R +A+ S H+ G+A D + S+
Sbjct: 86 IDIMAAAHNLMDVNEPYMLLSGYRSPKTNAMLRSKSRGVAKNSLHMRGQAADVRLASRSV 145
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ K A+ + GGVG Y S F+H+D G+VRSW
Sbjct: 146 NQMAKAAVACRGGGVGRYSGSNFVHMDCGQVRSW 179
>gi|121606473|ref|YP_983802.1| hypothetical protein Pnap_3585 [Polaromonas naphthalenivorans CJ2]
gi|120595442|gb|ABM38881.1| protein of unknown function DUF882 [Polaromonas naphthalenivorans
CJ2]
Length = 186
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
Query: 54 EEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE 113
+ R L + T K + + G +Y E L LNR L D ++ +DPQ+FD L
Sbjct: 38 PDARGLALVHTHTHEKIDLVYASGERYVPEALGWLNRFLRDHYTGDIGVIDPQVFDLLHS 97
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSR-RNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+QQ ++SGYR TN L + R+ +A KS H+ G+A+D +PGV L L++
Sbjct: 98 VQQALGSKGAFEVISGYRCPATNSHLRQTRSGGVATKSLHMEGRAIDIRLPGVPLADLHQ 157
Query: 173 IAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
A+ L+ GGVG+Y +F+H+D GRVR+W
Sbjct: 158 AALSLRAGGVGFYPREQFVHLDTGRVRNW 186
>gi|119383983|ref|YP_915039.1| hypothetical protein Pden_1238 [Paracoccus denitrificans PD1222]
gi|119373750|gb|ABL69343.1| protein of unknown function DUF882 [Paracoccus denitrificans
PD1222]
Length = 186
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
++ L ++R +++Y TG + +Y ++ L+++N + DW + Q+I
Sbjct: 27 ANAFGLLRGAGDIRRIRMYSGRTGESIDTVYWVEGKYIRDALNEINIFMRDWRTGQAIGF 86
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
DP+ D + E +LSGYR+ +TN ML R+ +AR S H++GKA D +
Sbjct: 87 DPRAIDIAAASHRLLQTNEPYMMLSGYRSPQTNAMLRSRSSGVARNSLHMVGKAADLRLK 146
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ +YK A GGVG Y S F+H+D G +R W
Sbjct: 147 SRSVSQMYKAAAACNAGGVGKYSRSNFVHMDCGPIRHW 184
>gi|332288327|ref|YP_004419179.1| twin-arginine translocation protein [Gallibacterium anatis UMN179]
gi|330431223|gb|AEC16282.1| twin-arginine translocation protein [Gallibacterium anatis UMN179]
Length = 186
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ ++ + L + L ++TG K F + L +LN
Sbjct: 12 LSLGGIILGSSFVANSALAALSTAAPKILHFKNINTGEKLSSPFSPNKGLAKSELQKLNY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D S +MDP+LF ++IQ + I ++ GYR TN + RR++ +A
Sbjct: 72 LMRDRRSNLVHNMDPKLFMKFYQIQSRLGLRSCEISVICGYRAPATNAAMHRRSKGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+DF I V+L + ++A LK GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHMRGQAIDFRIDNVALNRVREVAQSLKNGGVGYYPRSNFVHVDTGPVRTW 183
>gi|259418632|ref|ZP_05742549.1| twin-arginine translocation pathway signal [Silicibacter sp.
TrichCH4B]
gi|259344854|gb|EEW56708.1| twin-arginine translocation pathway signal [Silicibacter sp.
TrichCH4B]
Length = 143
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + +Y ++ + ++N + DW + Q +D + D + V
Sbjct: 1 MYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDWRTDQVKTIDLRTIDIMTASLNLLEV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+KS H+ G+A D + S+ + + A K G
Sbjct: 61 NEPYLLLSGYRSPQTNAMLRSRSRGVAKKSLHMQGQAADLRLASRSVSQMAQAAQACKAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VR+W
Sbjct: 121 GVGRYYGSNFVHMDCGVVRTW 141
>gi|52424878|ref|YP_088015.1| hypothetical protein MS0823 [Mannheimia succiniciproducens MBEL55E]
gi|52306930|gb|AAU37430.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 188
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L ++ + R L++ ++TG + G + L+QLN
Sbjct: 14 LALGGIILGATILPNSVLAAASTPSPRILRLRNINTGERFSSEIVNGKLLSSSALNQLNW 73
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + + MDP LF L++IQ + I I+ GYR+ TN + RR+R +A
Sbjct: 74 LLRDRRNNHTYRMDPNLFSKLYQIQGNLGLRNTEIQIICGYRSAATNSAMHRRSRGVASN 133
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
S HV G+A+DF I GVSL ++ + A L GGVGYY S F+H+D G VR+W+
Sbjct: 134 SFHVKGQAIDFRIDGVSLANVKRSAESLSNGGVGYYPRSNFVHVDTGPVRTWS 186
>gi|197106127|ref|YP_002131504.1| Twin-arginine translocation pathway signal [Phenylobacterium
zucineum HLK1]
gi|196479547|gb|ACG79075.1| Twin-arginine translocation pathway signal [Phenylobacterium
zucineum HLK1]
Length = 188
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
++ + L + R + + TG + +Y + L++
Sbjct: 14 ALAIGGAFGLSSFLVPAFAHALPTDAPRRAVLKNLHTGDAFNDVYFENGRYLPDALAEAQ 73
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
++L DW + + MDP L+D L I I+SGYR+ +TN ML +++ +A K
Sbjct: 74 KVLRDWRTGEETFMDPGLYDALHAISNKLETRAPFQIISGYRSPKTNAMLHAKSKGVASK 133
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
SQH LGKAVD + GV L L+K A+ + GGVGYY S F+H+D GRVR W
Sbjct: 134 SQHTLGKAVDVRMNGVELAHLHKAALAVGAGGVGYYPVSGFVHVDTGRVRQW 185
>gi|126726525|ref|ZP_01742366.1| hypothetical protein RB2150_02454 [Rhodobacterales bacterium
HTCC2150]
gi|126704388|gb|EBA03480.1| hypothetical protein RB2150_02454 [Rhodobacterales bacterium
HTCC2150]
Length = 206
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
+ L ++R +K+ TG + + +Y +E L +++ + DW S
Sbjct: 44 PFSAHSFGILRGGGDIRRIKMRSGRTGESIDMVYWVEGKYIREALDEVSYFMRDWRSDSV 103
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
I +D + D + E +LSGYR+ +TN ML ++R +A+ S H+ G+A D
Sbjct: 104 IGIDRRTIDIMAASHNLLDTTEPYMMLSGYRSPKTNAMLRSKSRGVAKNSLHMKGQAADL 163
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S + K A GGVG Y S F+H+D G+VRSW
Sbjct: 164 RLSNRSTGQIAKAAKSCASGGVGRYSRSNFVHMDCGQVRSW 204
>gi|89092900|ref|ZP_01165852.1| hypothetical protein MED92_10579 [Oceanospirillum sp. MED92]
gi|89082925|gb|EAR62145.1| hypothetical protein MED92_10579 [Oceanospirillum sp. MED92]
Length = 188
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
Query: 35 PDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYD 94
+ S+ + + + + R+L + + TG TF G +Y + L+ LN +L D
Sbjct: 20 GGISALSAISNPAIANIHKPQERSLSLLNLHTGESINSTFLAGGEYQYDSLADLNHVLRD 79
Query: 95 WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+ Q+++MD QL L E+QQ F I+++S YR+ +TN MLS++N K+A+KS H+
Sbjct: 80 HRTDQAMNMDKQLLLLLNELQQTFGEHNPIHVISAYRSPKTNAMLSQKNSKVAKKSYHMK 139
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+D IPGV L+ L+K ++ LK GGVG Y S F+H+DVGRVR W
Sbjct: 140 GQAIDIRIPGVELKDLHKASLDLKAGGVGLYTRSNFIHLDVGRVRRW 186
>gi|301156057|emb|CBW15528.1| conserved protein [Haemophilus parainfluenzae T3T1]
Length = 186
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ + ++ + R L Y V+T + F + + + L +L+
Sbjct: 12 LSLGGIVLGASMMPTSVLAMVSTPKPRILSFYNVNTNERLSGEFSATTGFTRSLLGKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
+ D + Q MDP LF + +Q I ++ GYR+ TN M R++R +A
Sbjct: 72 FMRDRRTDQVRRMDPNLFMKFYHLQSDLGLRTAQIDVICGYRSAATNAMRHRQSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY--YSKFLHIDVGRVRSW 199
S H+ G+A+DF IPGVSL L + A L+ GGVGY YS F+H+D G VR+W
Sbjct: 132 SYHIKGQAIDFRIPGVSLARLRQAAENLENGGVGYYPYSNFIHVDTGPVRTW 183
>gi|332558205|ref|ZP_08412527.1| hypothetical protein RSWS8N_04100 [Rhodobacter sphaeroides WS8N]
gi|332275917|gb|EGJ21232.1| hypothetical protein RSWS8N_04100 [Rhodobacter sphaeroides WS8N]
Length = 143
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + +Y E L ++N + DW + I +D + D + + V
Sbjct: 1 MYSGRTGESMDTIYWIEGEYIPEALKEINHFMRDWRTNDVIRIDARTVDIMAASHRLMDV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR +TN ML R+ +AR S H+ G+A D + S+ + K A G
Sbjct: 61 SEPYMLLSGYRCPKTNAMLRSRSSGVARNSLHLKGQAADLRLKSRSVGQMAKAAEACASG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VR W
Sbjct: 121 GVGRYSRSDFVHMDCGPVRHW 141
>gi|254462447|ref|ZP_05075863.1| twin-arginine translocation pathway signal [Rhodobacterales
bacterium HTCC2083]
gi|206679036|gb|EDZ43523.1| twin-arginine translocation pathway signal [Rhodobacteraceae
bacterium HTCC2083]
Length = 189
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S + L ++R +K+Y TG + + + +Y +E + +++ + DW + + +D
Sbjct: 31 SAAGFLRGGGDIRRIKMYSGRTGERIDMIYWVEGKYIKEAVQEVHHFMRDWRTNEVKFID 90
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+ D + E +LSGYR+ +TN ML R++ +A+ S H+ G+A D +
Sbjct: 91 LRTIDVMAAAHNLLGSNEPYMLLSGYRSPKTNNMLRSRSKGVAKNSLHMKGQAADLRLSS 150
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ + + A K GGVG Y S F+H+D G VR W
Sbjct: 151 RSVSQVSRAATACKGGGVGRYSGSNFVHMDCGPVRVW 187
>gi|308049139|ref|YP_003912705.1| hypothetical protein Fbal_1427 [Ferrimonas balearica DSM 9799]
gi|307631329|gb|ADN75631.1| protein of unknown function DUF882 [Ferrimonas balearica DSM 9799]
Length = 184
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEV--RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
+ + + ++ L R L Y TG + F Y Q GLSQ
Sbjct: 11 LLGGAGATLMLAGLPGVAHASLQSPNAPLRALSFYNRHTGERTTAEFWGEGHYLQSGLSQ 70
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
L+ +L D + +D L++ ++++ + + I+++SGYR+ +TN+ML+ R+ +A
Sbjct: 71 LDTVLRDHRVNEVAPIDRGLYELVYQLAEKLDYHKDIHLISGYRSMKTNEMLAARSGGVA 130
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
++S H AVD +PGV+L L K A+ L+ GGVGYY S F+H+D G VR W
Sbjct: 131 KRSYHTKAMAVDIAMPGVALSDLRKAALSLQGGGVGYYPRSGFVHVDTGPVRRW 184
>gi|119899289|ref|YP_934502.1| hypothetical protein azo2999 [Azoarcus sp. BH72]
gi|119671702|emb|CAL95615.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 193
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
L TG + +T+ G +Y L LN L D +S + +MDPQLFD L ++
Sbjct: 48 LAFDHTHTGEQLALTYAVGERYLPAALGDLNHFLRDHYSGEVGNMDPQLFDLLHTLRHTL 107
Query: 119 SVPEYIYILSGYRTQETNKMLS-RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
++S YR TN L R+ +AR+S H+ GKA+D I GV+L L A+ L
Sbjct: 108 GCSAPFQVISAYRCPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADLRDAALSL 167
Query: 178 KRGGVGYYS--KFLHIDVGRVRSWT 200
+ GGVGYY +F+H+D GRVRSW
Sbjct: 168 QLGGVGYYPREQFVHVDTGRVRSWA 192
>gi|260914200|ref|ZP_05920673.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631833|gb|EEX50011.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 186
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ + + + R L+ ++TG F ++ L +L+
Sbjct: 12 LSLGGIVLGASLLPNSLLAAVSTPKPRILRFRNINTGDVFSSEFSLSKGFSSVALKRLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D + MDP LF L+ IQ + I I+ GYR+ +N + RR+R +A
Sbjct: 72 LMRDKRNNHMHRMDPNLFSKLYRIQNNLGLRNTEIQIICGYRSPASNAAMRRRSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H G+A+DF I G SL + ++A +L GGVGYY S F+H+D G VR+W
Sbjct: 132 SYHTRGQAIDFRIDGTSLARVRQVAEKLSNGGVGYYPRSNFIHVDTGPVRTW 183
>gi|149915291|ref|ZP_01903819.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. AzwK-3b]
gi|149811012|gb|EDM70851.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. AzwK-3b]
Length = 189
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ + L ++R L++ TG + Y ++ + +++ + DW +
Sbjct: 27 PTYSNAAGFLRGAGDIRRLRMTSPRTGESIDTIYWIEGDYIRDAVREVSLFMRDWRTNDV 86
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++D + D + V E +LSGYR+ +TN ML R+ +AR S H+ G+A D
Sbjct: 87 HNIDLRTIDIMAAAHNLMDVTEPYMLLSGYRSPKTNAMLRSRSSGVARNSLHLQGEAADL 146
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ +++ A + GGVG Y S F+H+D G VR+W
Sbjct: 147 RLNSRSVGQMFRAASACRGGGVGKYSGSNFVHMDCGPVRTW 187
>gi|94967236|ref|YP_589284.1| hypothetical protein Acid345_0205 [Candidatus Koribacter versatilis
Ellin345]
gi|94549286|gb|ABF39210.1| protein of unknown function DUF882 [Candidatus Koribacter
versatilis Ellin345]
Length = 186
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+++L +I ++ + + +E R L+++ TG + + ++RG QY E L QL+
Sbjct: 15 LFALPLLIILLCAGTANGAPVNGMKEYR-LRLFHTHTGERIDIVYRRGDQYLPEALDQLD 73
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIAR 148
L D + DP++FD L ++ P+ + ++ GYRT +N+ L +A
Sbjct: 74 HYLRDHRTGTVHHYDPRVFDLLHDLTADLGEPDTEVNVICGYRTPWSNEYLRTHGHGVAS 133
Query: 149 KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ A+D IPGV L A+ + RGGVGYY S F+H+DVGR R W
Sbjct: 134 HSLHMQALAIDIRIPGVKTSDLRDAALAMHRGGVGYYSSSDFVHVDVGRERRW 186
>gi|126729660|ref|ZP_01745473.1| hypothetical protein SSE37_04280 [Sagittula stellata E-37]
gi|126709779|gb|EBA08832.1| hypothetical protein SSE37_04280 [Sagittula stellata E-37]
Length = 143
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + QY + + ++N + DW + ++D + D +
Sbjct: 1 MYSGRTGERIDMIYWIEGQYLADAIKEINYFMRDWRTNDIKNIDARTIDICTAAHRLLDC 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E ++SGYR+ +TN ML R+ +A+ S+H+ G+A D + S+ + K A+ G
Sbjct: 61 SEPYMLISGYRSPKTNAMLRSRSSGVAKNSRHLRGEAADLRLSSRSVNQMAKAAMACHGG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VRSW
Sbjct: 121 GVGRYSGSNFVHMDCGPVRSW 141
>gi|126736347|ref|ZP_01752089.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. CCS2]
gi|126714168|gb|EBA11037.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseobacter sp. CCS2]
Length = 189
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S+ + L ++R + ++ TG + + +Y E + ++N + DW + +++ M
Sbjct: 30 SNAAGFLRGAGDIRRIALHSGRTGERLETIYWIEGEYIAEAVREINMHMRDWRTGEAVQM 89
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + E +LSGYR+ TN+MLS R +AR S H+ G+A D +
Sbjct: 90 DLRTIDIMSAALNLMDTTEPYLLLSGYRSPRTNQMLSSNTRGVARNSLHMRGQAADLRLT 149
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G S + A+ + GGVG Y S F+H+D G VRSW
Sbjct: 150 GRSTAQMANAALACRAGGVGRYNGSNFVHMDCGPVRSW 187
>gi|149911943|ref|ZP_01900541.1| hypothetical protein PE36_11042 [Moritella sp. PE36]
gi|149804990|gb|EDM65019.1| hypothetical protein PE36_11042 [Moritella sp. PE36]
Length = 170
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 36 DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDW 95
++ H S + L+ Y + T ++ F Y Q L + LL D
Sbjct: 12 SVMPAHASQSALG-------TKKLEFYNIHTRERSQGDFWIDGLYQQGTLENFSHLLRDH 64
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
S MD +L++ L+++ + +V + +++SGYR+ +TN+ML+ ++ +A KS H+ G
Sbjct: 65 RQNLSAPMDKRLYELLYQLNKTLNVSDEYHVISGYRSPKTNEMLASKSSAVAIKSYHMRG 124
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+D IP V + L AI LK GGVGYY S F+H+D GRVR W
Sbjct: 125 MAIDIAIPDVKISHLRDAAISLKLGGVGYYPKSGFIHVDTGRVRIW 170
>gi|83593849|ref|YP_427601.1| twin-arginine translocation pathway signal [Rhodospirillum rubrum
ATCC 11170]
gi|83576763|gb|ABC23314.1| Twin-arginine translocation pathway signal [Rhodospirillum rubrum
ATCC 11170]
Length = 187
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R+L + + TG + + +Y + L +++ +L D+ + + +D L D L+E+
Sbjct: 42 RSLSLENLHTGERIKRVYWANGRYVPDSLREIDHVLRDFRTGDVLPIDRGLLDLLYELHA 101
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRR-NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
++SGYR+ TN +L +A++S H+ G A+D + ++ L + A+
Sbjct: 102 TMETRAPFRVISGYRSPRTNALLRETGGGGVAKQSLHMRGMAIDIALKDRTISQLRRGAL 161
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L+RGGVGYY S F+H+DVG+VRSW
Sbjct: 162 GLRRGGVGYYPESGFVHVDVGKVRSW 187
>gi|222109388|ref|YP_002551652.1| hypothetical protein Dtpsy_0167 [Acidovorax ebreus TPSY]
gi|221728832|gb|ACM31652.1| protein of unknown function DUF882 [Acidovorax ebreus TPSY]
Length = 190
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
+Q+ R L + T + + + +G Q+ L LN L D +S MDP LF L
Sbjct: 40 EQDLARRLAFNHLHTHERLALVYAQGEQFIPAALPTLNHFLRDHYSGDVGVMDPDLFHLL 99
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLS-RRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++Q + ++SGYR+ TN+ L R +AR+S H+ GKA+D +PGVSL L
Sbjct: 100 HRVRQTLQTQQPFEVISGYRSPHTNETLRTTRGGGVARRSLHMDGKAIDVRLPGVSLSDL 159
Query: 171 YKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
AI L+ GGVGYY+ +F+HID GRVRSW
Sbjct: 160 RDAAISLRAGGVGYYAREQFVHIDTGRVRSW 190
>gi|152990488|ref|YP_001356210.1| hypothetical protein NIS_0739 [Nitratiruptor sp. SB155-2]
gi|151422349|dbj|BAF69853.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 179
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 48 SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQL 107
S + + L++Y V TG + VTF +Y E + L L D+ + + +D ++
Sbjct: 21 SFAKAAQYEKVLQLYHVHTGERRKVTFWLDGEYIPEEIESLQYFLRDFRNDEIHPIDIKV 80
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
++L+++ + S I++LS YR+ TN+ L +A++S H+ GKA+DF IPG+SL
Sbjct: 81 IEYLYDVSKKCSHDREIHVLSAYRSPSTNEYLRHHGGGVAKQSYHLFGKAIDFRIPGISL 140
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A+ L +GGVGYY S F+HID G+ RSW
Sbjct: 141 HHVRNTALSLHKGGVGYYPKSGFIHIDSGKPRSW 174
>gi|163793881|ref|ZP_02187855.1| hypothetical protein BAL199_12651 [alpha proteobacterium BAL199]
gi|159180992|gb|EDP65509.1| hypothetical protein BAL199_12651 [alpha proteobacterium BAL199]
Length = 150
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R ++ + TG V + +Y L+ L+ L D +DP LFDFL +
Sbjct: 4 RRIRAQHLHTGESVDVVYFENGRYAPRSLAVLDHFLRDHRDGSIHPIDPVLFDFLHIVNS 63
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + I+ GYR++++N +L + +A+ S H++G+A+D IPG S+ + ++A
Sbjct: 64 RLGGRQPVEIVCGYRSEKSNALLRSISTGVAKNSLHMIGQAIDIRIPGRSVAEIAQVAES 123
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
++RGGVG Y S F+H+D G VR+W
Sbjct: 124 VQRGGVGRYRRSGFVHLDTGNVRTW 148
>gi|73537775|ref|YP_298142.1| twin-arginine translocation pathway signal [Ralstonia eutropha
JMP134]
gi|72121112|gb|AAZ63298.1| Twin-arginine translocation pathway signal [Ralstonia eutropha
JMP134]
Length = 187
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 14/186 (7%)
Query: 17 LYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKR 76
+ + + +LSP L L + R+L TG + +
Sbjct: 12 FLQHTGGLAIGAGLAALSPQLA-----------LANVSGARSLSFDHTHTGEHLQLVYAL 60
Query: 77 GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETN 136
G Q + + LN L D +S Q +DPQLF L+E+++ ++SGYR+ TN
Sbjct: 61 GDQVLPQAQTTLNHFLRDHYSGQVGVIDPQLFGLLFELRRTLGSESPFQVISGYRSPVTN 120
Query: 137 KMLS-RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDV 193
L +A+ S H+ GKA+D +PGV+L L A+ L GGVG+Y+ F+H+D
Sbjct: 121 ARLRLTGGGGVAKHSLHMDGKAIDIRLPGVALADLRDAAMSLGVGGVGFYAREDFVHVDT 180
Query: 194 GRVRSW 199
GRVR W
Sbjct: 181 GRVRHW 186
>gi|83953682|ref|ZP_00962403.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. NAS-14.1]
gi|83841627|gb|EAP80796.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Sulfitobacter sp. NAS-14.1]
Length = 143
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + Y ++ +S+LN + DW + MD + D + V
Sbjct: 1 MYSGRTGERIDMIYWIEGNYIKDAVSELNYFMRDWRTDGVKSMDLRTVDIMAASHNLLDV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+ S H+ G+A D + S+ + + AI G
Sbjct: 61 SEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHMRGQAADLRLASRSVNQMARAAIACNGG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G+VR+W
Sbjct: 121 GVGRYSGSNFVHMDCGQVRNW 141
>gi|152978758|ref|YP_001344387.1| hypothetical protein Asuc_1086 [Actinobacillus succinogenes 130Z]
gi|150840481|gb|ABR74452.1| protein of unknown function DUF882 [Actinobacillus succinogenes
130Z]
Length = 186
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + + + R ++++ ++TG F GS + + +
Sbjct: 12 LSLGGIALGAVVLPNSLLAAVSTPKPRIMRLHNINTGEFFNTEFSEGSFISASVQKKFDW 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
+ D + MDP LF L+ IQ + I I+ GYR+ +N + RR+R +A
Sbjct: 72 FMRDRRNNLVHRMDPNLFAKLYRIQSNLGLRNTEIQIICGYRSPASNAAMRRRSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+DF I G++L ++ A R++ GGVG+Y S F+H+D G VR+W
Sbjct: 132 SYHIRGKAIDFRIDGIALNRVHHAAKRMQSGGVGFYPSSNFVHVDTGPVRTW 183
>gi|84684825|ref|ZP_01012725.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667160|gb|EAQ13630.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodobacterales bacterium HTCC2654]
Length = 148
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + +Y TG + +Y +E L+++N + D + I +D + D
Sbjct: 2 RRIAMYAGRTGESINTIYWIEGEYIKEALAEINYFMRDARVDKQIAIDTRTLDITAAAHA 61
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
E +LSGYR+ ETN ML R+R +A+ S H+ G+A D + S+ ++K A
Sbjct: 62 LLDSTEPYMLLSGYRSPETNAMLRSRSRGVAKNSLHLKGQAADLRLNSRSVNQIFKAAQA 121
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+ GGVG Y S F+H+D G+VRSW
Sbjct: 122 CRAGGVGKYSGSNFVHMDCGQVRSW 146
>gi|299135938|ref|ZP_07029122.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX8]
gi|298602062|gb|EFI58216.1| protein of unknown function DUF882 [Acidobacterium sp. MP5ACTX8]
Length = 230
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 28 SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
P+ LSP + +S ++ LK+Y + TG V ++ G+ Y + +
Sbjct: 51 RPVALLSPGTLPEDGESLPTA-----GHKYELKLYHLHTGESIDVVYRIGNVYIPAAMEK 105
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRN--R 144
LN L D ++ DP FD L + P+ I ++ GYRT E+N+ L +
Sbjct: 106 LNHFLRDHRTEDESHYDPHEFDLLHNLLARLGRPQGMIDVVCGYRTPESNEYLRTLSADT 165
Query: 145 KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+A+ SQH+ KA+D +PG+ R L A+ L+ GGVGYY S+F+H+DVG VR WT
Sbjct: 166 GVAKHSQHMEAKAIDIRVPGIRTRRLRDAALSLQAGGVGYYPISQFVHVDVGPVRHWT 223
>gi|84503419|ref|ZP_01001479.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola batsensis HTCC2597]
gi|84388206|gb|EAQ01158.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola batsensis HTCC2597]
Length = 143
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + Y ++ +++++ + DW + +D + D + V
Sbjct: 1 MYSARTGERIDMIYWVDGHYIKDAVTEVSHFMRDWRNDIVKPIDLRTIDIMAASHNLLEV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ ETN ML R+R +AR S H+ G+A D + S+ + + A + G
Sbjct: 61 NEPYMLLSGYRSPETNAMLRSRSRNVARNSLHLKGQAADLRLSSRSVNQMARAASACRAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VRSW
Sbjct: 121 GVGRYSGSNFVHMDCGPVRSW 141
>gi|171056701|ref|YP_001789050.1| hypothetical protein Lcho_0009 [Leptothrix cholodnii SP-6]
gi|170774146|gb|ACB32285.1| protein of unknown function DUF882 [Leptothrix cholodnii SP-6]
Length = 205
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 47 SSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ 106
+S R L ++ TG + + + +Y E L LN L D +S Q + P
Sbjct: 49 TSAATGLGGARELALHHTHTGERIALAYAVDDRYVPEALGALNHFLRDHYSGQVGTIAPP 108
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS--RRNRKIARKSQHVLGKAVDFYIPG 164
LFD L + Q + ++SGYR ETN L R +A++S H+ G+A+D +PG
Sbjct: 109 LFDQLHRLHQVLGAAQPFQVISGYRCPETNNTLRLTRGGGGVAKRSLHMDGRAIDVRLPG 168
Query: 165 VSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
V L L A+ L GGVGYY F+H+D G VR W
Sbjct: 169 VPLADLRDAALSLGAGGVGYYPGQQFVHLDNGPVRRW 205
>gi|304310213|ref|YP_003809811.1| Bacterial protein of unknown function (DUF882) [gamma
proteobacterium HdN1]
gi|301795946|emb|CBL44147.1| Bacterial protein of unknown function (DUF882) [gamma
proteobacterium HdN1]
Length = 188
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
Y + + ++ + ++ R L + TG K V ++ G Y + + QL
Sbjct: 17 YMVGAAALPLLSLPELA-EAAAKKNGRLLAFDHLHTGEKLAVVYRVGGHYVPQAMHQLQH 75
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR---KIA 147
L D+ + MDP L+D LW ++Q + I+S YR+ +TN+ L R +A
Sbjct: 76 LTRDFRTGGIHRMDPNLYDLLWHLRQDIESDQPFEIISAYRSPQTNQALRARRGQRSGVA 135
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDVGRVRSW 199
+S H+ G+A+D + GV+L +L A+ LK GGVGYY F+H+D GRVR W
Sbjct: 136 TRSLHMDGQAMDIAVGGVALTALRDAALDLKAGGVGYYPEGFIHVDTGRVRRW 188
>gi|89054635|ref|YP_510086.1| twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
gi|88864184|gb|ABD55061.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
Length = 185
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
++ + L ++R L++Y G + + Y L ++N + DW +
Sbjct: 23 PVMANATGLLRGAGDIRKLQMYNGRAGESLNMIYWIEGDYIAPALDEVNYFMRDWRTDGV 82
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
ID++ D + E +LSGYR+ ETN ML RR+ +AR S+H++G+A D
Sbjct: 83 IDINIGTIDIMAAAHNLLETSEPYTLLSGYRSPETNAMLRRRSSGVARNSRHMVGEAADL 142
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ ++ A GGVG Y S F+H+D G VRSW
Sbjct: 143 QMQSRSVTQVFNAARSCNAGGVGRYSRSNFVHMDCGPVRSW 183
>gi|121592584|ref|YP_984480.1| hypothetical protein Ajs_0149 [Acidovorax sp. JS42]
gi|120604664|gb|ABM40404.1| protein of unknown function DUF882 [Acidovorax sp. JS42]
Length = 190
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
+Q+ R L + T + + + +G Q+ L LN L D +S MDP LF L
Sbjct: 40 EQDLARRLAFNHLHTHERLALVYAQGEQFVPAALPTLNHFLRDHYSGDVGVMDPDLFHLL 99
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLS-RRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
++Q ++SGYR+ TN+ L R +AR+S H+ GKA+D +PGVSL L
Sbjct: 100 HRVRQTLQTQRPFEVISGYRSPHTNETLRTTRGGGVARRSLHMDGKAIDVRLPGVSLSDL 159
Query: 171 YKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
AI L+ GGVGYY+ +F+HID GRVRSW
Sbjct: 160 RDAAISLRAGGVGYYAREQFVHIDTGRVRSW 190
>gi|77917995|ref|YP_355810.1| hypothetical protein Pcar_0380 [Pelobacter carbinolicus DSM 2380]
gi|77544078|gb|ABA87640.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 178
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 25 FVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA-IVTFKRGSQYNQE 83
F+ + + + + L+ + +S L ++ R+L +Y TG + + Y +
Sbjct: 6 FLKTGLAATAGILMPWPAMAS-----LVNKDHRSLSLYNTHTGEHLRNIVYWEKGSYQHD 60
Query: 84 GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN 143
L Q+N LL D + ++ +DP L D L E+ I+SGYR+ TN+ L +
Sbjct: 61 SLQQINHLLRDHRTGETKAIDPNLLDLLHELHDRIPADTPFEIISGYRSPATNRQLQAHS 120
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
R +A KS H+ G+A+D + G L +L K A +KRGGVGYY S F+HID GRVR W
Sbjct: 121 RGVATKSLHMAGQAIDIRLRGYPLANLRKTATAMKRGGVGYYPRSNFVHIDTGRVRYW 178
>gi|322515093|ref|ZP_08068100.1| peptidase M15 superfamily protein [Actinobacillus ureae ATCC 25976]
gi|322118899|gb|EFX91081.1| peptidase M15 superfamily protein [Actinobacillus ureae ATCC 25976]
Length = 215
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ L L+ ++TG F G + L QLN
Sbjct: 43 LSLGGLVLGASLLPGKVMAALSTPAPLALRFRNINTGDTYAAKF-HGGHLSVADLHQLNH 101
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D H+ Q +DP LF L +IQQ I +LSGYR+ +TN + R R +A
Sbjct: 102 LMRDRHTNQIKRIDPMLFVKLNQIQQRLGFRNAEIQVLSGYRSAKTNARMHRTQRGVASN 161
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+AVDF + GV L + A L GGVGYY S F+H+D G VR+W
Sbjct: 162 SYHIRGQAVDFRVSGVPLAKVRAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 213
>gi|320109077|ref|YP_004184667.1| hypothetical protein AciPR4_3924 [Terriglobus saanensis SP1PR4]
gi|319927598|gb|ADV84673.1| protein of unknown function DUF882 [Terriglobus saanensis SP1PR4]
Length = 244
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 10/206 (4%)
Query: 3 KTEIF--RILKVIWIGLYVSVASF-FVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTL 59
++ +F ++ + + +G+ +F V +P+ + + D + + ++ + +E L
Sbjct: 18 RSSVFAPKVFRRVALGVAALTFTFVAVRTPVRAEAGDSLPTVGIAHVAPT--EVKESYVL 75
Query: 60 KIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS 119
++ + TG V +++G++Y+ EG+++LN L D + + + DP F+ L ++
Sbjct: 76 RLRHLHTGEALNVVYRQGTEYSAEGIAKLNTFLRDHRTMDTANYDPAEFELLHKLMAKLG 135
Query: 120 VPE-YIYILSGYRTQETNKMLSRRN--RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
P I I+ GYRT ETN ML R +A SQH+L KA+D +PG+S R+L A+
Sbjct: 136 RPNGEIDIVCGYRTPETNHMLRTRAALTGVAEHSQHMLSKAIDIRVPGISTRALRDAALS 195
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSWT 200
L GGVGYY S+F+H+DVG VR W+
Sbjct: 196 LGLGGVGYYPISQFVHVDVGPVRQWS 221
>gi|310815556|ref|YP_003963520.1| hypothetical protein EIO_1073 [Ketogulonicigenium vulgare Y25]
gi|308754291|gb|ADO42220.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 155
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 52 DQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL 111
++R +++Y TG + + QY E + ++ + DW + + I +D + D L
Sbjct: 4 GAGDIRRIRMYSGRTGEQLDTIYWIDGQYVPEAVREVTYFMRDWRNNEMIGIDTRTIDIL 63
Query: 112 WEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY 171
+ V +LSG+R+ +TN ML + +AR S H+ G+AVD + G S+ +
Sbjct: 64 TATHRLVDVNRPYMLLSGFRSPQTNAMLRATSSGVARDSLHMRGQAVDVRLEGRSVSQVA 123
Query: 172 KIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A R GGVG Y S F+H+D G VR W
Sbjct: 124 SAAERCSAGGVGRYSGSNFVHMDCGAVRQW 153
>gi|320352700|ref|YP_004194039.1| hypothetical protein Despr_0572 [Desulfobulbus propionicus DSM
2032]
gi|320121202|gb|ADW16748.1| protein of unknown function DUF882 [Desulfobulbus propionicus DSM
2032]
Length = 188
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R+L T + +T+ G YN L+Q+++ L D+ + Q+ +DP+L D LW IQ
Sbjct: 44 RSLSFVHTRTQQELTLTYAWGQAYNPRALAQISQFLRDYQTGQTHPIDPKLLDILWAIQG 103
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
++SG+R+ +TN+ L R + +A S H+ GKAVD PG+ +++ A+
Sbjct: 104 EMGRKGVYEVISGFRSPQTNRKLRRTSSGVAGHSLHMQGKAVDIRFPGIDTDQIHQCAVE 163
Query: 177 LKRGGVGYYSK--FLHIDVGRVRSW 199
++ GGVGYY+K F+H+D G+ R+W
Sbjct: 164 MRTGGVGYYAKADFVHLDSGQYRTW 188
>gi|332525151|ref|ZP_08401328.1| hypothetical protein RBXJA2T_04998 [Rubrivivax benzoatilyticus JA2]
gi|332108437|gb|EGJ09661.1| hypothetical protein RBXJA2T_04998 [Rubrivivax benzoatilyticus JA2]
Length = 185
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLL 92
L+ ++ + + L R L + TG + + SQ+ L LNR L
Sbjct: 17 LAVGVLPVAATTRPA--LAAGPGPRALAMNHTHTGESLDLVYAMDSQFVPAALGTLNRFL 74
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY-ILSGYRTQETNKMLSR-RNRKIARKS 150
D ++ +DPQLF+ L ++ +Y ++SGYR ETN L R +AR+S
Sbjct: 75 RDHYTGSVGLIDPQLFELLHRVRGLLGTESAVYEVISGYRCPETNDRLRHTRGGGVARRS 134
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H+ G+A+D + GV L+ L A+ L+ GGVGYY + F+H+D GRVR W
Sbjct: 135 LHMDGRAIDVRLKGVPLKELRDAALSLQAGGVGYYEQERFVHLDTGRVRHW 185
>gi|94501827|ref|ZP_01308339.1| hypothetical protein RED65_14392 [Oceanobacter sp. RED65]
gi|94426048|gb|EAT11044.1| hypothetical protein RED65_14392 [Oceanobacter sp. RED65]
Length = 182
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
S L+ S Q++ R LK+ + TG +A +T+ +Y +GL+ + ++
Sbjct: 15 SAPLLAAPSFVQASIQPKSQDQFRALKLRNLHTGERADITYWEQGEYLIDGLADIFLMMR 74
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D + +D L D L +Q I ++SGYR+ +TN L IA++S H+
Sbjct: 75 DHRENEVASLDLALIDQLHHVQSKLETNREIMLVSGYRSPKTNDDLRHAQDGIAQESLHM 134
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+GKA+DFYIPG++ R ++K + + GGV YY S F+H+D GR R W
Sbjct: 135 MGKALDFYIPGINHRHVHKATLAVSTGGVHYYRKSGFIHLDTGRKRRW 182
>gi|288941017|ref|YP_003443257.1| hypothetical protein Alvin_1286 [Allochromatium vinosum DSM 180]
gi|288896389|gb|ADC62225.1| protein of unknown function DUF882 [Allochromatium vinosum DSM 180]
Length = 180
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 51 LDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDF 110
E R L + T VT++ G Y + L +LN+ D+ + MDPQLFD
Sbjct: 27 RSAERPRVLSFRHLHTDEWVDVTYRIGDTYQRSALLRLNQFFRDFRTGDVTTMDPQLFDI 86
Query: 111 LWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L++++ P+ ++S YR+ TN L + +R +A+ S H+ G+A+D P +S R
Sbjct: 87 LYDLKLRLGDPDARFDVISAYRSPATNARLRKASRGVAKNSLHLHGQAIDVRFPDLSTRR 146
Query: 170 LYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
L A+ L RGGVGYY S F+H+D G VRSW
Sbjct: 147 LRDAAVSLGRGGVGYYRRSDFVHLDTGAVRSW 178
>gi|253700196|ref|YP_003021385.1| hypothetical protein GM21_1572 [Geobacter sp. M21]
gi|251775046|gb|ACT17627.1| protein of unknown function DUF882 [Geobacter sp. M21]
Length = 189
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y ++ + VT++ +Y QE L LN L ++ + +MD ++ ++L +
Sbjct: 46 LSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLFRCHYTNEMTEMDLRVIEYLNRLDNT 105
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+I+SGYR+ N ML +++ +A+ S H+ G A+D IP + L + + A+ L
Sbjct: 106 LGGDNEIHIISGYRSPAYNAMLRSKSKGVAKNSLHMKGMAIDLAIPSLGLDQIRRSALTL 165
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
GGVGYY F+HID G R+W
Sbjct: 166 AAGGVGYYPQPGFVHIDSGHFRTW 189
>gi|219872271|ref|YP_002476646.1| hypothetical protein HAPS_2268 [Haemophilus parasuis SH0165]
gi|219692475|gb|ACL33698.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 185
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L ++ ++ + + L++ +STG + + + L++LN
Sbjct: 12 LALGGIVLGATLLPNLVHAVTSTPKPLILRLKRLSTGETLSANYHTNG-FAAKDLNKLNH 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
++ D H + +DP+LF L +IQ + + I I+SGYR+ +TN L RR+R +A
Sbjct: 71 IMRDVHINRIKRIDPKLFVKLTQIQARLGLRKSEILIVSGYRSAQTNARLRRRSRGVASN 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+LGKA+DF I GV L + A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SYHILGKAIDFRIEGVPLARIKAAAESLNNGGVGYYPHSNFVHVDTGPVRTW 182
>gi|254363168|ref|ZP_04979217.1| hypothetical protein MHA_2751 [Mannheimia haemolytica PHL213]
gi|261493953|ref|ZP_05990461.1| hypothetical protein COK_2351 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494762|ref|ZP_05991241.1| hypothetical protein COI_0555 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153095062|gb|EDN75613.1| hypothetical protein MHA_2751 [Mannheimia haemolytica PHL213]
gi|261309579|gb|EEY10803.1| hypothetical protein COI_0555 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310385|gb|EEY11580.1| hypothetical protein COK_2351 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 184
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ L L+ V+TG F G N+ LSQLN
Sbjct: 12 LSLGGLVLGASLLPGQVMAALSTPAPAALRFRNVNTGDTYTAKFGAGG-LNKTDLSQLNY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D H Q +DP+LF L ++Q+ I +LSGYR+ +TN L RR+R +A
Sbjct: 71 LMRDRHINQVKAIDPKLFVKLNQLQRRLGFHNAEILVLSGYRSAQTNARLRRRSRGVASH 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+LG+AVDF + GV L + + A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SYHILGQAVDFQVSGVPLYKVKQAAESLNNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|197119040|ref|YP_002139467.1| hypothetical protein Gbem_2663 [Geobacter bemidjiensis Bem]
gi|197088400|gb|ACH39671.1| protein of unknown function DUF882 [Geobacter bemidjiensis Bem]
Length = 190
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y ++ + VT++ +Y QE L LN L ++ + MD ++ ++L +
Sbjct: 46 LSLYNLNLNERLTVTYRNAMGEYCQEALQALNWLFRCHYTNEMTKMDLRVIEYLNRLDNT 105
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+I+SGYR+ N ML +++ +A+ S H+ G+A+D IP L + + A+ L
Sbjct: 106 LGGNNEIHIISGYRSPAYNAMLRSKSKGVAKDSLHMKGRAIDLAIPSFGLDQIRRSALTL 165
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
GGVGYY F+HID G R+W
Sbjct: 166 AAGGVGYYPQPGFVHIDSGNFRTW 189
>gi|224369239|ref|YP_002603403.1| hypothetical protein HRM2_21410 [Desulfobacterium autotrophicum
HRM2]
gi|223691956|gb|ACN15239.1| hypothetical protein HRM2_21410 [Desulfobacterium autotrophicum
HRM2]
Length = 188
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+ L SS L E +TL+ Y TG + V + Y +L
Sbjct: 19 FFLLASAQIAAAVLVPSSVLATPSEPKTLRFYHTHTGERISVDYSPE-TYKGSMRRELEY 77
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D+ + + +D +L D L IQ I+SGYR+ +TN L +++ +A+KS
Sbjct: 78 FLRDFRTGEVHRIDRRLLDVLTTIQHNCGSHSCYEIISGYRSAKTNAFLRKKSSGVAKKS 137
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
H+ G+A+D + + + L +AI+ RGGVG+Y K F+HID GR R W
Sbjct: 138 YHMQGRAMDIRLADLDTKVLRDLAIKFNRGGVGFYPKSDFVHIDTGRKRRW 188
>gi|163731884|ref|ZP_02139331.1| hypothetical protein RLO149_21309 [Roseobacter litoralis Och 149]
gi|161395338|gb|EDQ19660.1| hypothetical protein RLO149_21309 [Roseobacter litoralis Och 149]
Length = 143
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + Y +E + ++N + DW + MD + D +
Sbjct: 1 MYSGRTGERIDMIYWIEGDYVREAVKEVNHFMRDWRTDGVKSMDLRTIDIMSAAHNLMDA 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +A+ S HV G+A D + S+ + + A G
Sbjct: 61 NEPYMLLSGYRSPQTNAMLRSRSRGVAKNSLHVKGQAADLRLSTRSVSQMARAAAACNGG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VR+W
Sbjct: 121 GVGKYSRSNFVHMDCGVVRTW 141
>gi|322420047|ref|YP_004199270.1| hypothetical protein GM18_2541 [Geobacter sp. M18]
gi|320126434|gb|ADW13994.1| protein of unknown function DUF882 [Geobacter sp. M18]
Length = 188
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y V+ + VT++ +Y E L LN + H+ Q+ +MD ++ ++L +
Sbjct: 45 LSLYNVNCNERLTVTYRNSLGEYCDEALQALNWIFRCHHTDQTTEMDLRVVEYLNRLDNS 104
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I I+SGYR+ E N L R++ +A+ S H+ G A+D IPG L + + AI L
Sbjct: 105 LGGNNEIRIISGYRSPEYNAQLRSRSKGVAKDSLHMKGMAIDLAIPGFGLNQIRRSAIAL 164
Query: 178 KRGGVGYY--SKFLHIDVGRVRSW 199
GGVGYY S F+HID G R+W
Sbjct: 165 AAGGVGYYPQSGFVHIDAGHFRTW 188
>gi|307249326|ref|ZP_07531320.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858620|gb|EFM90682.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 184
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ S LL L+ ++TG TF + L +LN
Sbjct: 12 LSLGGLVLGASLLPSKVMALLSTPTPLALRFRNINTGDTYAATFS-NGSLSSGDLGKLNY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D H+ Q +DP LF L +IQQ + +LSGYR+ +TN + R R +A
Sbjct: 71 LMRDRHTNQVKRIDPMLFVKLNQIQQRLGFRNAEVLVLSGYRSAQTNARMHRTRRGVASN 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+AVDF I GV L L A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SYHIRGQAVDFRISGVPLAKLKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|258545646|ref|ZP_05705880.1| peptidase M15 family nonpeptidase family protein [Cardiobacterium
hominis ATCC 15826]
gi|258519113|gb|EEV87972.1| peptidase M15 family nonpeptidase family protein [Cardiobacterium
hominis ATCC 15826]
Length = 207
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Query: 27 TSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKR-GSQYNQEGL 85
+ + + ++ + R +K++ TG F Y Q +
Sbjct: 30 SRRTFIKTAAIVTAGLLAPADWVRAATGRERMIKMFNPHTGESIRAVFWTPEYGYIQPAM 89
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
+++R D+ Q + +D L + L +Q I + SGYR+ TN ML+RR++
Sbjct: 90 DEISRFFRDFRQNQIVSVDIDLLNILHYMQSNVGNSSTIELHSGYRSPATNSMLARRSKN 149
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ ++S H+ +A D I G + R L +A RL GG+G Y S F+H+D G +R+W
Sbjct: 150 VGKQSYHMKAQAADISIQGYTSRQLRAMAQRLNAGGIGIYRGSNFIHVDSGPIRTW 205
>gi|165975578|ref|YP_001651171.1| hypothetical protein APJL_0123 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149393|ref|YP_001967918.1| hypothetical protein APP7_0124 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249826|ref|ZP_07336030.1| hypothetical protein APP6_1234 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251946|ref|ZP_07338117.1| hypothetical protein APP2_0273 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307244930|ref|ZP_07527027.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247105|ref|ZP_07529157.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307251649|ref|ZP_07533554.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307253884|ref|ZP_07535736.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307256147|ref|ZP_07537934.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258338|ref|ZP_07540079.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307262709|ref|ZP_07544337.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|165875679|gb|ABY68727.1| hypothetical protein APJL_0123 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189914524|gb|ACE60776.1| hypothetical protein APP7_0124 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649376|gb|EFL79561.1| hypothetical protein APP2_0273 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651393|gb|EFL81545.1| hypothetical protein APP6_1234 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854095|gb|EFM86303.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856354|gb|EFM88505.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306860846|gb|EFM92854.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863088|gb|EFM95030.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865328|gb|EFM97224.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867522|gb|EFM99369.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306871964|gb|EFN03680.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 184
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ S LL L+ ++TG TF + L +LN
Sbjct: 12 LSLGGLVLGASLLPSKVMALLSTPTPLALRFRNINTGDTYAATFS-NGSLSSGDLGKLNY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D H+ Q +DP LF L +IQQ + +LSGYR+ +TN + R R +A
Sbjct: 71 LMRDRHTNQVKRIDPMLFVKLNQIQQRLGFRNAEVLVLSGYRSAQTNARMHRTRRGVASN 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+AVDF I GV L L A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SYHIRGQAVDFRISGVPLAKLKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|167855603|ref|ZP_02478363.1| hypothetical protein HPS_03651 [Haemophilus parasuis 29755]
gi|167853294|gb|EDS24548.1| hypothetical protein HPS_03651 [Haemophilus parasuis 29755]
Length = 186
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L ++ ++ + + L++ +STG + + + L++LN
Sbjct: 12 LALGGIVLGATLLPNLVHAVTSTPKPLILRLKRLSTGETLSANYHTNG-FAAKDLNKLNH 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
++ D H + +DP+LF L +IQ + + I I+SGYR+ +TN L RR+R +A
Sbjct: 71 IMRDVHINRIKRIDPKLFVKLTQIQARLGLRKSEILIVSGYRSAQTNARLRRRSRGVASN 130
Query: 150 -SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+LGKA+DF I GV L + A L GGVGYY S F+H+D G VR+W
Sbjct: 131 NSYHILGKAIDFRIEGVPLARIKAAAESLNNGGVGYYPHSNFVHVDTGPVRTW 183
>gi|32034589|ref|ZP_00134745.1| COG3108: Uncharacterized protein conserved in bacteria
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207610|ref|YP_001052835.1| hypothetical protein APL_0122 [Actinobacillus pleuropneumoniae L20]
gi|307260579|ref|ZP_07542271.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|126096402|gb|ABN73230.1| hypothetical protein APL_0122 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306869656|gb|EFN01441.1| Twin-arginine translocation pathway signal [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 184
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ S LL L+ ++TG TF + L +LN
Sbjct: 12 LSLGGLVLGASLLPSKVMALLSTPTPLALRFRNINTGDTYAATFS-NGSLSSGDLGKLNY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D ++ Q +DP LF L +IQQ + +LSGYR+ +TN + R R +A
Sbjct: 71 LMRDRYTNQVKRIDPMLFVKLNQIQQRLGFRNAEVLVLSGYRSAQTNARMHRTRRGVASN 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+AVDF I GV L L A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SYHIRGQAVDFRISGVPLAKLKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|89068812|ref|ZP_01156195.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola granulosus HTCC2516]
gi|89045582|gb|EAR51645.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanicola granulosus HTCC2516]
Length = 143
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + + + QY + L ++N + DW + Q +D + D V
Sbjct: 1 MYNGRTGEQIDMIYWIDGQYIADALQEVNHFMRDWRNGQVAPIDTRTIDIATAAHNLMDV 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E ++SGYR+ +TN ML + +A+ S H+ G+A D + S+ + + A + G
Sbjct: 61 SEPYTLISGYRSPQTNAMLRSNSSGVAKNSLHLQGQAADLRLSSRSVSQMAQAAAACRAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VRSW
Sbjct: 121 GVGRYSGSNFVHMDCGAVRSW 141
>gi|218514618|ref|ZP_03511458.1| hypothetical protein Retl8_13432 [Rhizobium etli 8C-3]
Length = 184
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 4/166 (2%)
Query: 15 IGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF 74
G ++ S ++ P L + +S E R LK++ TG KA +T+
Sbjct: 2 SGGIAALLSRAKRVATQTILPALFAFPALVGTASF--ASAEDRALKLFFTHTGEKATITY 59
Query: 75 KRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE 134
KR +++ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+++S YR+
Sbjct: 60 KRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHVVSAYRSPA 119
Query: 135 TNKMLSRRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK 178
TN ML R+R +A+KSQH+LGKA+DFY+PGV L +L IA++++
Sbjct: 120 TNNMLRNRSRITGVAKKSQHMLGKAMDFYVPGVKLSTLRAIAMQMQ 165
>gi|302038386|ref|YP_003798708.1| hypothetical protein NIDE3087 [Candidatus Nitrospira defluvii]
gi|300606450|emb|CBK42783.1| conserved exported protein of unknown function, DUF882 [Candidatus
Nitrospira defluvii]
Length = 196
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
+ +Y + T + VT++ Y+Q+ L LN L H+ ++ MD QL +F+ +Q+
Sbjct: 52 RVSLYNLHTDERLSVTYRDEAGAYDQDALHALNHFLRCHHTNETTMMDVQLIEFINLVQK 111
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I+SGYR+ E N+ L R + AR S HV G+AVD IPGV LR+L ++A+R
Sbjct: 112 RVGGRREVLIVSGYRSPEYNEQLIRMGTRAARHSYHVSGQAVDVQIPGVPLRTLREVALR 171
Query: 177 LKRGGVGYYS--KFLHIDVGRVRSW 199
L GGVGYY KF+H+D G R W
Sbjct: 172 LGCGGVGYYPRGKFVHLDSGPFRHW 196
>gi|167470671|ref|ZP_02335375.1| hypothetical protein YpesF_22992 [Yersinia pestis FV-1]
Length = 157
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 74/146 (50%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
+L + L R L + ++TG F G YN++ LS+LN
Sbjct: 12 LTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
+ D+ + + +DP+LFD L+ +Q + + ++SGYR+ TN L +R +A++S
Sbjct: 72 IFRDYRANKVKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNELREHSRGVAKQS 131
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIR 176
H G+A+DF+I G+ L + K A++
Sbjct: 132 YHTKGQAMDFHIEGIQLSYIRKAALK 157
>gi|56551227|ref|YP_162066.1| hypothetical protein ZMO0331 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760891|ref|ZP_04758980.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753139|ref|YP_003226032.1| hypothetical protein Za10_0902 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542801|gb|AAV88955.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374510|gb|EER63971.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552502|gb|ACV75448.1| protein of unknown function DUF882 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 198
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 8 RILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVR--TLKIYVVS 65
++ + + +V++ +T+ SD L V+ L V
Sbjct: 4 KLGRRQLLTGFVALGGMAITAGK--------AQASLHQPGSDFLHWGNVKEKRLAFRNVH 55
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS--VPEY 123
T + F Y+ EGL+++N L DW + ++D L + L +I+ +
Sbjct: 56 TNERIDARFFGKHGYDDEGLAEINHALRDWRTGDITEVDTDLLNLLVKIRDRLDISANQP 115
Query: 124 IYILSGYRTQETNKML---SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
++ GYR+ TN+ L R+ +A SQH+LGKA D +PGVSL L A ++G
Sbjct: 116 FDLICGYRSPITNRRLHERRGRHSGVAVHSQHLLGKATDIAMPGVSLNHLRMAAEFDQQG 175
Query: 181 GVGYYS--KFLHIDVGRVRSW 199
GVGYY F+H+D G VRSW
Sbjct: 176 GVGYYPEDGFIHVDTGPVRSW 196
>gi|53804851|ref|YP_113297.1| Tat pathway signal sequence domain-containing protein
[Methylococcus capsulatus str. Bath]
gi|53758612|gb|AAU92903.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Methylococcus capsulatus str. Bath]
Length = 195
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Query: 45 SMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMD 104
S + RTL +Y TG + Y++ L Q + L D H+ +S MD
Sbjct: 39 SFDAYAYSLSRERTLYLYNKHTGEDMTLVCCPERNYDRALLRQFSHFLRDHHADESYPMD 98
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L D L+ I I+SGYRT ETN+ML R + +A S H+ GKA+D +
Sbjct: 99 PGLIDILYAISAMTRSSGTFEIISGYRTPETNRMLRRHSHGVAEHSLHMEGKAIDLRMSD 158
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
VS R++ K A+ L+ GGVGYY + F+H+D GR+RSW
Sbjct: 159 VSTRTIRKTALALQYGGVGYYRRADFVHLDTGRIRSW 195
>gi|218677356|ref|ZP_03525253.1| hypothetical protein RetlC8_00295 [Rhizobium etli CIAT 894]
Length = 160
Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 60/126 (47%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
+ +GL+Q+NR L DW + MDP+L D +WE+ + +YI+I+S YR+ TN ML
Sbjct: 1 DPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPATNNMLR 60
Query: 141 RRNR--KIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVG 194
R+R +A+KSQH+LGKA+DFY+PGV L +L A++++ GGVGYY S F+H+DVG
Sbjct: 61 NRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRATAMQMQVGGVGYYPTSGSPFVHLDVG 120
Query: 195 RVRSWT 200
VR+W
Sbjct: 121 NVRAWP 126
>gi|84517172|ref|ZP_01004528.1| hypothetical protein SKA53_03929 [Loktanella vestfoldensis SKA53]
gi|84509067|gb|EAQ05528.1| hypothetical protein SKA53_03929 [Loktanella vestfoldensis SKA53]
Length = 143
Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+Y TG + +Y E + ++N + DW + +++ MD + D + +
Sbjct: 1 MYNGRTGETLDTIYWIEGEYIAEAVREINLHMRDWRTGEAVQMDLRTIDIMSGALRLMET 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ TN ML R+ +AR S H+ G+A D + S+ + + A G
Sbjct: 61 SEPYLLLSGYRSPATNAMLRSRSSGVARDSLHMRGQAADLRLRSRSITQMAQAATAFNAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSW 199
GVG Y S F+H+D G VR+W
Sbjct: 121 GVGRYGRSNFVHMDCGPVRTW 141
>gi|257465087|ref|ZP_05629458.1| hypothetical protein AM202_01160 [Actinobacillus minor 202]
gi|257450747|gb|EEV24790.1| hypothetical protein AM202_01160 [Actinobacillus minor 202]
Length = 185
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ + L L+ V+TG V F G LSQLN
Sbjct: 12 LSLGGLVLGASLLPNQVMASLSTVAPLALRFRNVNTGDTHAVKFS-GGGLASADLSQLNY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D H+ Q +DP LF L ++QQ I +LSGYR+ +TN L R +R +A
Sbjct: 71 LMRDRHTGQVKRIDPNLFVKLNQLQQRLGFRNAEILVLSGYRSAKTNAALRRNHRGVASN 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+DF + GV L + A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SFHIRGQAIDFQVSGVPLSKVKAAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|154252027|ref|YP_001412851.1| hypothetical protein Plav_1575 [Parvibaculum lavamentivorans DS-1]
gi|154155977|gb|ABS63194.1| protein of unknown function DUF882 [Parvibaculum lavamentivorans
DS-1]
Length = 186
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
++ S D RTL++ +++G K + + Y E L ++ + D +S
Sbjct: 3 AAPSILRADAPYKRTLRMQSLNSGEKLDLVYWADGDYLPEALKRVEWFMRDLRENKSAPT 62
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
DP+L D LWEI Q IY +SGYRT++TN L R + S H+ G A+D
Sbjct: 63 DPRLLDLLWEIDQNTRSKNPIYTMSGYRTEKTNAWLDARGNGVDPGSFHMRGMAMDITQD 122
Query: 164 GVSLRSLYKIAIRLKRGGVGYYS---KFLHIDVGRVRSW 199
+ +Y++A +L RGG G+Y ++H+DVG V +W
Sbjct: 123 FLDPEEVYRVARKLGRGGAGFYPTKTPYVHVDVGPVDAW 161
>gi|297568522|ref|YP_003689866.1| protein of unknown function DUF882 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924437|gb|ADH85247.1| protein of unknown function DUF882 [Desulfurivibrio alkaliphilus
AHT2]
Length = 186
Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEV-RTLKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLN 89
SL + + + +LL R L +Y + TG + +TF+ + L+++N
Sbjct: 15 SLLATVALGGGGLAWAHELLAAVRPARRLALYHLHTGERLTITFRDPRGNHIPSALAEIN 74
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
RLL H+ + +DP+ D+L + +I+SGYR+ N+ L R R++A +
Sbjct: 75 RLLRCHHTGEIHPIDPETIDYLSLVDSKLGGGNEFHIISGYRSPAYNRRLLREGRQVAPR 134
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+D +P + +L + A+ LK GGVGYY S F+H+D G RSW
Sbjct: 135 SLHLTGRAIDVRLPKIGAATLRRAALDLKLGGVGYYPRSGFVHLDSGPFRSW 186
>gi|163746380|ref|ZP_02153738.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanibulbus indolifex HEL-45]
gi|161380265|gb|EDQ04676.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Oceanibulbus indolifex HEL-45]
Length = 181
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 44 SSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDM 103
S+ + L ++R +++Y TG + + + Y ++ +++N + DW + + +M
Sbjct: 22 SNAAGFLRGAGDIRRIRMYSGRTGERLDMIYWIEGHYIKDAFAEINHFMRDWRTDEVTNM 81
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D + V E +LSGYR+ +TN ML R+ +A+ S H+ G+A D +
Sbjct: 82 DLRTVDIMAASHNLLDVNEPYMLLSGYRSPKTNAMLRSRSSGVAKNSLHLKGQAADLRLA 141
Query: 164 GVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S+ + + A+ GGVG Y S F H+D G VRSW
Sbjct: 142 SRSVHQVARAAVACGGGGVGRYSGSNFTHMDCGNVRSW 179
>gi|78222960|ref|YP_384707.1| twin-arginine translocation pathway signal [Geobacter
metallireducens GS-15]
gi|78194215|gb|ABB31982.1| Twin-arginine translocation pathway signal [Geobacter
metallireducens GS-15]
Length = 187
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEE---VRTLKIYVVSTGSKAIVTFKRG-SQYNQEGLSQ 87
+ + S + E L ++ T + + F+ Y+ + L+
Sbjct: 14 ATLTGALTLMGVGSAFGRFVSTPELLPPGQLSLFNTHTRERIALAFRDAAGNYDLDSLNT 73
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
LN +L ++ + +MD +FL + + F I+I+S YR+ N +L +A
Sbjct: 74 LNWILRCHYTNEVTEMDVNTLEFLNLVDKKFGGNNEIHIISAYRSPLYNNLLRENGHGVA 133
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
+ S H+ G+A+D IPG S+ S+ + A+ L GGVG+Y F+HID G R+W
Sbjct: 134 QHSLHLAGRAIDISIPGKSIASIREAAVDLHMGGVGFYPNSGFVHIDSGAFRTW 187
>gi|315633944|ref|ZP_07889233.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477194|gb|EFU67937.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 186
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ + + + R L ++TG K F G ++ L L+
Sbjct: 12 LSLGGIVLGASLLPNTVLAAVSTPKPRLLSFRNINTGEKLSAEFALGRGFSNATLRLLDH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + Q MDP LF +++QQ + I I+ GYR+ +N + RR+R +A
Sbjct: 72 LLRDKRTNQVHRMDPNLFTKFYKVQQNLGLRNTEIQIICGYRSAASNAAMHRRSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+DF I G+ L + L+ GGVG+Y S F+H+D G VR+W
Sbjct: 132 SYHIRGQAIDFRIDGIPLAKVRDAVDALQNGGVGFYPRSNFVHMDTGPVRTW 183
>gi|39997900|ref|NP_953851.1| hypothetical protein GSU2807 [Geobacter sulfurreducens PCA]
gi|39984845|gb|AAR36201.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length = 229
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEV-RTLKIYVVSTGSKAIVTFKR-GSQYNQEGLSQLN 89
SL L S+++++ L++ L + + TG VT++ + + + L+ +N
Sbjct: 58 SLLGVLCLRGIGSALATEFLEESYPVGRLSLRNIHTGEHLSVTYRTPDGEVDLDALNSIN 117
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL + Q +MD + ++L + + I+SGYR+ E N++LS N +A++
Sbjct: 118 WLLRCHFTNQHTEMDLAVIEYLNMVDKVLGGGREFRIISGYRSPEYNRILSEHNGAVAKQ 177
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+D +PGVSL L +A + GGVGYY S F+H+D GR R+W
Sbjct: 178 SLHMEGKAIDIAVPGVSLAVLRDLAAGFRCGGVGYYPHSGFVHLDSGRFRTW 229
>gi|296532929|ref|ZP_06895589.1| tat pathway signal sequence domain protein [Roseomonas cervicalis
ATCC 49957]
gi|296266739|gb|EFH12704.1| tat pathway signal sequence domain protein [Roseomonas cervicalis
ATCC 49957]
Length = 196
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 28 SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQ 87
+ + L+ S + VR+LK+ T + R +Y++E L +
Sbjct: 23 REVIAAGLGLLGATALPSRRAAAAPLAPVRSLKVQRAYTEDSFEGVYFRDGRYDREALHK 82
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
L+ + D + + MDP+LFD L + + E I SGYRT E N +RR+ +++
Sbjct: 83 LDWVFRDLSAAEVTPMDPRLFDVLHSVAERLEASEAFVISSGYRTPEHNANNARRSTRVS 142
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
S H+ G A DF +PG + ++A +++ GGVG Y F+H+D G R W
Sbjct: 143 TVSLHMSGMAADFRLPGRDAFGVARMAAQMQVGGVGLYRREGFVHLDCGPPRRW 196
>gi|83952123|ref|ZP_00960855.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius nubinhibens ISM]
gi|83837129|gb|EAP76426.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius nubinhibens ISM]
Length = 143
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
+ TG + + +Y ++ + +++ + DW +D + D +
Sbjct: 1 MVSSRTGEQIDTIYWIEGEYIKDAVQEISYFMRDWRLDAVKPIDTRTIDIMAAAHALVDT 60
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
E +LSGYR+ +TN ML R+R +AR+S H+ G+A D + S+ L + A + G
Sbjct: 61 TEPYKMLSGYRSSKTNAMLRSRSRNVARQSLHITGQAADLRLSSRSVAQLSQAAQSCRAG 120
Query: 181 GVGYY--SKFLHIDVGRVRSWT 200
GVG Y S F+H+D G +RSW
Sbjct: 121 GVGRYYRSNFVHMDCGDLRSWN 142
>gi|240948090|ref|ZP_04752500.1| hypothetical protein AM305_04808 [Actinobacillus minor NM305]
gi|240297570|gb|EER48062.1| hypothetical protein AM305_04808 [Actinobacillus minor NM305]
Length = 185
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ + L L+ ++TG V F G L +L+
Sbjct: 12 LSLGGLVLGASLLPNQVMASLSTVTPLALRFRNINTGDTHAVKF-NGGNLASADLKRLDY 70
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARK 149
L+ D H+ Q +DP LF L +QQ I +LSGYR+ +TN L R +R +A
Sbjct: 71 LMRDRHTGQIKHIDPNLFVKLNMLQQRLGFRNAEILVLSGYRSAKTNAALRRTHRGVASN 130
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+AVDF I GV+L + A L GGVGYY S F+H+D G VR+W
Sbjct: 131 SFHIRGQAVDFQISGVALNKVKTAAESLHNGGVGYYPRSNFVHVDTGPVRTW 182
>gi|146329486|ref|YP_001209260.1| hypothetical protein DNO_0341 [Dichelobacter nodosus VCS1703A]
gi|146232956|gb|ABQ13934.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 207
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKR-GSQYNQ 82
F+ + + + L+ + + R ++++ TG + Y +
Sbjct: 32 TFIKTAAIATAGLLLPSEWAKAAAR------RDRVIRMHNPHTGETLRTVYWAPDYGYIK 85
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ ++++ D+ +Q +D L + L IQ + I + SGYR+ +TN+MLSRR
Sbjct: 86 VSIDEISKFFRDFRQQQIKTVDIDLLNILHYIQSNVGLNHSIQLNSGYRSPQTNRMLSRR 145
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ +A+KS H+ A D I G + R L IA RL GG+G Y S F+H+D G VR W
Sbjct: 146 SHSVAQKSYHMKAMAADITIDGFNSRQLKIIAKRLNAGGIGLYRNSNFIHVDSGPVREW 204
>gi|148262113|ref|YP_001228819.1| hypothetical protein Gura_0028 [Geobacter uraniireducens Rf4]
gi|146395613|gb|ABQ24246.1| protein of unknown function DUF882 [Geobacter uraniireducens Rf4]
Length = 186
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L +Y + +T++ Y+ ++ LN +L +++Q DMD ++ ++L + +
Sbjct: 43 LSLYNTHNSERLTITYRNAAGDYDIGAINALNWILRCHYTQQVADMDVRVIEYLNLVDKR 102
Query: 118 FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
I+I+SGYR+ N +L + R +A+ S H+ GKA+D IPG+ L + A+ L
Sbjct: 103 LGGNNEIHIISGYRSPVYNSLLRQEGRHVAKHSLHLKGKAIDIAIPGIGLDRVRHTALNL 162
Query: 178 KRGGVGYYSK--FLHIDVGRVRSW 199
+ GGVGYY K F+H+D G R+W
Sbjct: 163 RYGGVGYYPKTGFVHVDSGNFRAW 186
>gi|261253178|ref|ZP_05945751.1| hypothetical protein VIA_003203 [Vibrio orientalis CIP 102891]
gi|260936569|gb|EEX92558.1| hypothetical protein VIA_003203 [Vibrio orientalis CIP 102891]
Length = 115
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
+N + D+ + MD +LFD + IQ+ V + I+SGYR+ TN+ L ++ +A
Sbjct: 1 MNHICRDFRRNEVHAMDKRLFDHISNIQKELGVEAEVQIISGYRSPATNEALRGKSSGVA 60
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
+KS H+LG+A+DF + GV+L+ + IA LK GGVGYY S F+H+D G VR W
Sbjct: 61 KKSYHMLGQAIDFRLDGVNLKQVRDIARELKFGGVGYYPGSNFIHMDTGPVRYWA 115
>gi|298506834|gb|ADI85557.1| protein of unknown function DUF882 [Geobacter sulfurreducens KN400]
Length = 186
Score = 183 bits (466), Expect = 8e-45, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDLLDQEEV-RTLKIYVVSTGSKAIVTFKR-GSQYNQEGLSQLN 89
SL L S+++++ L++ L + + TG VT++ + + + L+ +N
Sbjct: 15 SLLGVLCLRGIGSALATEFLEESYPVGRLSLRNIHTGEHLSVTYRTPDGEVDLDVLNSIN 74
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL + Q +MD + ++L + + I+SGYR+ E N++LS N +A++
Sbjct: 75 WLLRCHFTNQHTEMDLAVIEYLNMVDKELGGGREFRIISGYRSPEYNRILSEHNGAVAKQ 134
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ GKA+D +PGVSL L +A + GGVGYY S F+H+D GR R+W
Sbjct: 135 SLHMEGKAIDIAVPGVSLAVLRDLAAGFRCGGVGYYPHSGFVHLDSGRFRTW 186
>gi|149203869|ref|ZP_01880838.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. TM1035]
gi|149142986|gb|EDM31028.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. TM1035]
Length = 189
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
S+ + L ++R +++ TG + + Y +E + +++ + DW + Q
Sbjct: 27 PTFSNAAGFLRGAGDIRRIRLVSPRTGERLDTIYWIEGDYLKEAVREISLFMRDWRTNQV 86
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++D + D + V E +LSGYR+ +TN ML R+ +AR S H++G+A D
Sbjct: 87 KNIDIRTIDIMAASHNLLDVSEPYTLLSGYRSAQTNAMLRSRSNGVARNSLHMVGEAADL 146
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ +Y+ + GGVG Y S F+H+D G VR+W
Sbjct: 147 RLGSRSVSQIYRAGVACGGGGVGRYSGSNFVHMDCGPVRTW 187
>gi|325271517|ref|ZP_08138034.1| putative secreted protein [Pseudomonas sp. TJI-51]
gi|324103364|gb|EGC00694.1| putative secreted protein [Pseudomonas sp. TJI-51]
Length = 206
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGS 68
+LK + + +F ++P+ + + L+ ++ + + R L +Y STG
Sbjct: 12 LLKRSVVAGITGMGAFTFSAPLLASTGLLLP-ANYANQADAAAFWAKPRVLNLYRPSTGE 70
Query: 69 KAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF----SVPEYI 124
+ + R + G + +L D + ++ ++D +L + L Q + E
Sbjct: 71 HKQICYWRDGHLDLAGYREACHMLRDVRAGKATEIDLRLLNLLRGQQGWLELAYGFKEPY 130
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
+ SGYRT+ETN+ AR S H G+A D P + + ++ + GGVG+
Sbjct: 131 QVNSGYRTKETNEA----TEGAARDSYHTKGQACDGKFPSLPIEYQGRLMSAFRTGGVGF 186
Query: 185 Y---SKFLHIDVGRVRSW 199
Y KF+H DVGRVR W
Sbjct: 187 YINRQKFIHSDVGRVRYW 204
>gi|258593539|emb|CBE69880.1| conserved exported protein of unknown function [NC10 bacterium
'Dutch sediment']
Length = 188
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 98/172 (56%), Gaps = 4/172 (2%)
Query: 32 SLSPDLIKYHQQSSMSSDL-LDQEEVRTLKIYVVSTGSKAIVTFKR-GSQYNQEGLSQLN 89
+ + + + + +L + + + +Y T + VT+++ +Y+ + LS ++
Sbjct: 17 ASLVSALALVGRPAWAQELVIPSGQEGRIALYNTHTHERLDVTYRQPSGEYDADALSAID 76
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
+LL ++ + MD + +F+ + + I+++SG+R+ E NK+L +R+R++AR
Sbjct: 77 QLLRCHYTNKVAKMDVGVIEFVNALDKRLGGGNEIHVISGFRSPEYNKLLRQRSRRVARH 136
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
S H GKA+D IPGV L ++ K+A+ L+ GGVGYY F+H+D G+ R W
Sbjct: 137 SLHQSGKAIDLRIPGVGLNAIRKMALDLRSGGVGYYPRRGFIHLDSGQFRHW 188
>gi|85702798|ref|ZP_01033902.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. 217]
gi|85671726|gb|EAQ26583.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Roseovarius sp. 217]
Length = 189
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 41 HQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
SS + L ++R +++ TG + + Y +E + +++ + DW + Q
Sbjct: 27 PTFSSAAGFLRGAGDIRRIRLVSPRTGERLDTIYWIEGDYLKEAVREISLFMRDWRTNQV 86
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++D + D + E +LSGYR+ +TN ML R+ +A+ S H++G+A D
Sbjct: 87 RNIDIRTIDIMAASHNLLDASEPYTLLSGYRSAQTNAMLRSRSGGVAKNSLHMVGEAADL 146
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ S+ +Y+ + GGVG Y S F+H+D G VR+W
Sbjct: 147 RLGSRSVSQIYRAGVACGAGGVGRYSGSNFVHMDCGPVRTW 187
>gi|293392040|ref|ZP_06636374.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952574|gb|EFE02693.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 186
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL ++ ++ R L ++T K F G ++ L L+
Sbjct: 12 LSLGGIVLGATLLPDTVLAVVSTPRPRMLSFRNINTQEKLSAEFVLGRGFSNTTLRLLDH 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARK 149
LL D + Q MDPQLF + +QQ + I I+ GYR+ +N + RR+R +A
Sbjct: 72 LLRDKRNNQVHKMDPQLFTKFYRVQQNLCLRNTEIQIICGYRSAASNAAMHRRSRGVASN 131
Query: 150 SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
S H+ G+A+DF I GV L L L GGVG+Y S F+H+D G VR+W
Sbjct: 132 SYHIRGQAIDFRIDGVPLAKLRDAVEALNDGGVGFYPRSNFIHMDTGPVRTW 183
>gi|72384653|gb|AAZ67618.1| hypothetical protein [Haemophilus parasuis 29755]
Length = 154
Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 5/146 (3%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L++ +STG + + + L++LN ++ D H + +DP+LF L +IQ
Sbjct: 7 ALRLKRLSTGETLSANYHTNG-FAAKDLNKLNHIMRDVHINRIKRIDPKLFVKLTQIQAR 65
Query: 118 FSVPE-YIYILSGYRTQETNKMLSRRNRKIARK-SQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ + I I+SGYR+ +TN L RR+R +A S H+LGKA+DF I GV L + A
Sbjct: 66 LGLRKSEILIVSGYRSAQTNARLRRRSRGVASNNSYHILGKAIDFRIEGVPLARIKAAAE 125
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVGYY S F+H+D G VR+W
Sbjct: 126 SLNNGGVGYYPHSNFVHVDTGPVRTW 151
>gi|288959478|ref|YP_003449819.1| hypothetical protein AZL_026370 [Azospirillum sp. B510]
gi|288911786|dbj|BAI73275.1| hypothetical protein AZL_026370 [Azospirillum sp. B510]
Length = 289
Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 56 VRTLKIYVVSTGSKAIVTFKR-GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI 114
R++ + ++G A VT+ R G Y+ + ++ L D S ++I +DP L D L E+
Sbjct: 45 PRSVVLQHPASGETASVTYWRPGDGYDPAAMREIAALFRDRRSDETIPIDPALIDMLVEL 104
Query: 115 QQYFSVP--EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYK 172
+Q P I I SGYR+ TN L+R N +A S H+ G+A DF I G+ L +
Sbjct: 105 RQRVGAPPDSPIRITSGYRSSATNASLARTNPNVAENSYHLRGQAADFSIAGIPPSRLAE 164
Query: 173 IAIRLKRGGVGYY--SKFLHIDVGRVRSWT 200
A ++RGG Y + +H+D G R+WT
Sbjct: 165 EAAAMQRGGYAMYAHTGHVHVDTGPFRTWT 194
>gi|51244921|ref|YP_064805.1| hypothetical protein DP1069 [Desulfotalea psychrophila LSv54]
gi|50875958|emb|CAG35798.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 185
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
+ TG + Y+ L L D+ +K+ +D +L D L +I+Q
Sbjct: 44 ISFSHTHTGECFDLC-VNDRAYSPVVRENLFFFLRDFRTKEVHSIDFRLMDILLKIRQKT 102
Query: 119 SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK 178
++SGYR+ TN +L ++ +A+KS H+ G+A+D + V + L +A+ L+
Sbjct: 103 GSTGIYQVISGYRSPNTNNLLRGKSTGVAKKSLHLQGRAIDIRLTDVPTKELRDVALSLR 162
Query: 179 RGGVGYY--SKFLHIDVGRVRSW 199
GGVGYY S F+HID G VRSW
Sbjct: 163 AGGVGYYAKSDFVHIDTGHVRSW 185
>gi|149927482|ref|ZP_01915736.1| putative secreted protein [Limnobacter sp. MED105]
gi|149823755|gb|EDM82981.1| putative secreted protein [Limnobacter sp. MED105]
Length = 213
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 10 LKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMS-SDLLDQEEVRTLKIYVVSTGS 68
+K + + F+ + + DL+ DL + RTL++ +G
Sbjct: 12 IKAVSTLAVIGSVDTFLNRGVLAAGSDLVPPPDLFDPGLVDLTFWLQPRTLEMVRPQSGE 71
Query: 69 KAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQ---QYFSVPEYIY 125
+ +T+ + N Q+ LL D + Q MD Q+ D LW Q + + +
Sbjct: 72 RLNITYWKDGHLNPIAYEQICGLLRDVQANQVFRMDTQIIDTLWAAQAFVRRYGFVAPVE 131
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
I SGYR+ +TN L + AR S H+ G+AVDF +PG+ R L ++ + GGVG+Y
Sbjct: 132 ITSGYRSPKTNARLIEKGLPAARNSLHLKGQAVDFRLPGLHPRVLGELVEGFRAGGVGFY 191
Query: 186 ------SKFLHIDVGRVRSW 199
++H D G R W
Sbjct: 192 FRVGAKGGWIHADTGPERVW 211
>gi|78045353|ref|YP_361603.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78033857|emb|CAJ19856.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 206
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKY-HQQSSMSSDLLDQEEVRTLKIYVVSTG 67
+L+ I G+ ++ + V SP ++ S ++ Y H + S+ Q R L+++ ++
Sbjct: 13 LLRSIASGIA-AMGTGAVLSPAFARSGFVMPYGHADAYTSATFWAQ--PRVLRLHRPASN 69
Query: 68 SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY----FSVPEY 123
+ R Q + G ++ RLL D + Q+ +D +L + L +Q + + + +
Sbjct: 70 ETVDACYWRDGQLDSAGYIRICRLLRDVQAGQAATIDMRLLNLLRGMQGWVEASYGIRDP 129
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+ SGYRTQ TN + AR S H+ G+AVD PG+ L + + GGVG
Sbjct: 130 YQVNSGYRTQATN----KSTEGAARHSLHMKGQAVDGLHPGLPLEYTGNLFKAFQGGGVG 185
Query: 184 YY---SKFLHIDVGRVRSW 199
+Y KF+H DVG VR W
Sbjct: 186 FYLNSKKFIHADVGSVRQW 204
>gi|254463068|ref|ZP_05076484.1| hypothetical outer membrane protein [Rhodobacterales bacterium
HTCC2083]
gi|206679657|gb|EDZ44144.1| hypothetical outer membrane protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 227
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF 118
L +TG K ++ + ++ +SQLN L DW + ++D + L ++ +
Sbjct: 81 LAFLNANTGEKMPMSLQEKGGLRKKQVSQLNHFLRDWRQNEIKEIDGAVLKTLIDVCTNY 140
Query: 119 SVPE---YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ + I SGYR+++TN ML R + K+AR+S H+ G+A+DF +P VS+R L K A
Sbjct: 141 APKSGALEVRITSGYRSKKTNNMLRRSSSKVARRSLHIQGRAIDFSLPNVSIRELSKAAK 200
Query: 176 RLKRGGVGYYSKFLHIDVGRVRSW 199
+ GGVG YS F+HID G R+W
Sbjct: 201 NICPGGVGTYSTFVHIDSGPKRAW 224
>gi|261868417|ref|YP_003256339.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413749|gb|ACX83120.1| twin-arginine translocation pathway signal [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 148
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
L ++T K F G ++ L L+ LL D + Q MDPQLF + +QQ
Sbjct: 1 MLSFRNINTQEKLSAEFVLGRGFSNTTLRLLDHLLRDKRNNQVHKMDPQLFTKFYRVQQN 60
Query: 118 FSVPE-YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ I I+ GYR+ +N + RR+R +A S H+ G+A+DF I GV L L
Sbjct: 61 LGLRNTEIQIICGYRSAASNAAMHRRSRGVASNSYHIRGQAIDFRIDGVPLAKLRDAVEA 120
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVG+Y S F+H+D G VR+W
Sbjct: 121 LNDGGVGFYPRSNFIHMDTGPVRTW 145
>gi|241589949|ref|YP_002979974.1| protein of unknown function DUF882 [Ralstonia pickettii 12D]
gi|240868661|gb|ACS66320.1| protein of unknown function DUF882 [Ralstonia pickettii 12D]
Length = 194
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 53 QEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLW 112
R L + TG + + + + Q LL D + + M+P L D L
Sbjct: 45 WSRPRALWLRRKETGEEVRTVYWADGKLVVDAYVQCCTLLRDVRAGAVVQMNPTLLDILC 104
Query: 113 EIQQYF---SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
+ +F + I + SGYRT TN R AR S H++G+A D +P V
Sbjct: 105 GVYGWFAQAGIERPIVVTSGYRTPATN----SRAEGAARNSMHLVGRAADIRVPDVPTEY 160
Query: 170 LYKIAIRLKRGGVGYYS--KFLHIDVGRVRSWT 200
L ++ + L+ GGVGYY+ +F+H+D GR+R+W
Sbjct: 161 LARLGMYLRGGGVGYYATKQFVHVDSGRLRTWA 193
>gi|330984444|gb|EGH82547.1| hypothetical protein PLA107_05396 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 179
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 17 LYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKR 76
++ A+ +T P L+ S LLDQ+ R L +Y T + I + +
Sbjct: 2 GALATAATIITEP-------LMAQPGASDWRKRLLDQD--RVLNLYRPQTKERRIFCYWK 52
Query: 77 -GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF---SVPEYIYILSGYRT 132
G + + G LL D K+ +D LFD L+ IQQ+ I +LSGYRT
Sbjct: 53 KGQGFQKTGYLDGIWLLRDATYKKQSFIDANLFDVLFIIQQWLTIEGRNPEIQVLSGYRT 112
Query: 133 QETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLH 190
E N L A++S H+ GKA D ++PGV+ + L +++ + GGVG Y F+H
Sbjct: 113 PEHNFRL----EGAAKQSLHMQGKACDIHVPGVTTKLLAAMSMMIAAGGVGIYQDRGFIH 168
Query: 191 IDVGRVRSW 199
+D G++R+W
Sbjct: 169 VDTGKIRTW 177
>gi|217970213|ref|YP_002355447.1| hypothetical protein Tmz1t_1799 [Thauera sp. MZ1T]
gi|217507540|gb|ACK54551.1| protein of unknown function DUF882 [Thauera sp. MZ1T]
Length = 187
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 33 LSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLL 92
L L S ++ ++ L T + V F+ Y Q L +++ LL
Sbjct: 16 LLKGLATLPLGLSAAAQAAQRDP--QLDFRHTHTDERLSVAFRNRQGYIQPALQRIDWLL 73
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR-RNRKIARKSQ 151
D+ + +S MDP+L+D L + I+SGYR+ TN ML + R +AR+S
Sbjct: 74 RDFRTGESTRMDPRLYDMLHALSLACGGN-TFEIISGYRSPTTNTMLRKTRGGGVARRSL 132
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
H+ GKA+D + GV L A+ L GGVGYY S F+HID G VRSW
Sbjct: 133 HMDGKAIDIRLVGVDTARLRDAALALGGGGVGYYPDSDFVHIDTGPVRSW 182
>gi|209966190|ref|YP_002299105.1| hypothetical protein RC1_2925 [Rhodospirillum centenum SW]
gi|209959656|gb|ACJ00293.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 192
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 57 RTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ 116
R + + +G +A V + Y+ + +N LL D ++ + +DP L DFL+++
Sbjct: 43 RRVVLVHRQSGERADVIYFHNGGYDPRAMESVNLLLRDRNTGEKAPIDPALMDFLFDLFY 102
Query: 117 YFSVP--EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
+P + +LSGYR+ +TN L + N + AR+S H+ GKA+DF +P + +L +IA
Sbjct: 103 RTGLPPTTEVQVLSGYRSPQTNAKLVKANSQAARESFHMQGKALDFRVPALPGPALAEIA 162
Query: 175 IRLKRGGVGYYS--KFLHIDVGRVRSW 199
++RGG +Y +HID G VR+W
Sbjct: 163 KTMQRGGAAFYPGTGHIHIDTGPVRTW 189
>gi|255596953|ref|XP_002536657.1| conserved hypothetical protein [Ricinus communis]
gi|223518961|gb|EEF25727.1| conserved hypothetical protein [Ricinus communis]
Length = 224
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMS-----SDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
+P + H ++ +D + R L + S +T+ R Q
Sbjct: 39 TGAPQLVVGGGNGPQHALRQLALGEIPADFWEH--PRELNLQRGS--DHVKITYWRDGQL 94
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI---QQYFSVPEYIYILSGYRTQETNK 137
EG RLL D + Q MDP +FD L + Q + + + I SG+RT TN
Sbjct: 95 VPEGYWAACRLLRDVRANQMTYMDPAVFDILRGLLGYYQAWGWDQPLIINSGFRTVATNN 154
Query: 138 MLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS------KFLHI 191
L ++ A+ S H+ G+AVD ++ G+ + L ++ + +RGGVG+Y F+H+
Sbjct: 155 QLVNKHEGAAKNSMHLYGRAVDLHMAGIPVAHLMQLGLYFRRGGVGFYPPTTDRIGFVHL 214
Query: 192 DVGRVRSW 199
D GR+R+W
Sbjct: 215 DTGRLRTW 222
>gi|84514824|ref|ZP_01002187.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Loktanella vestfoldensis SKA53]
gi|84510983|gb|EAQ07437.1| Tat (twin-arginine translocation) pathway signal sequence domain
protein [Loktanella vestfoldensis SKA53]
Length = 167
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 60 KIYVVSTGSKA--IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQY 117
+++ +TG + V + Q +LN + DW Q MDP + EI +
Sbjct: 23 RLHNANTGERLFLDVPASLDLGWIQR--RRLNHFMRDWRQDQVKVMDPSVVQDFLEICRA 80
Query: 118 F---SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA 174
F P + + SGYR+Q TN++L +R+R +A S H+ G+A+DF +P VS R L A
Sbjct: 81 FATPGNPTDVKVNSGYRSQRTNELLRQRSRNVAINSLHMEGRAIDFALPKVSQRQLGATA 140
Query: 175 IRLKRGGVGYYSKFLHIDVGRVRSWT 200
+ RGGVG YS F+HID GR R W+
Sbjct: 141 NAICRGGVGTYSTFIHIDSGRNRHWS 166
>gi|260768292|ref|ZP_05877226.1| lipoprotein putative [Vibrio furnissii CIP 102972]
gi|260616322|gb|EEX41507.1| lipoprotein putative [Vibrio furnissii CIP 102972]
Length = 102
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD +LFD + IQ + I+SGYR+ TN+ML ++ +A+KS H+LG+A+DF +
Sbjct: 1 MDKKLFDQISRIQAVLGTEAEVQIISGYRSPATNEMLRGKSSGVAKKSFHMLGQAIDFRL 60
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
GVSL+ +++ A+ LK GGVGYY S+F+HID G VR W
Sbjct: 61 DGVSLKQIHEAALSLKAGGVGYYPKSQFVHIDTGPVRQW 99
>gi|261211002|ref|ZP_05925292.1| lipoprotein putative [Vibrio sp. RC341]
gi|260839977|gb|EEX66577.1| lipoprotein putative [Vibrio sp. RC341]
Length = 102
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 48/99 (48%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD LFD L EIQ ++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF +
Sbjct: 1 MDKVLFDQLSEIQFLLGTQAEVHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRL 60
Query: 163 PGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
GVSL+ + + AI L+ GGVGYY K F+HID G VR W
Sbjct: 61 DGVSLKKIREAAISLQAGGVGYYPKSRFIHIDTGPVRQW 99
>gi|121582884|ref|YP_973326.1| hypothetical protein Pnap_4302 [Polaromonas naphthalenivorans CJ2]
gi|120596146|gb|ABM39584.1| protein of unknown function DUF882 [Polaromonas naphthalenivorans
CJ2]
Length = 180
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 25 FVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEG 84
+ + I + D RTL +Y +T T+ +
Sbjct: 5 AFLQTVAAGLVAPILQPHVMGQTQDFWSM--PRTLHLYRPATRETVHATYFANGEVILCE 62
Query: 85 LSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF---SVPEYIYILSGYRTQETNKMLSR 141
+L LL D + Q++ M D L IQ + + ++ SGYR+ TN
Sbjct: 63 YEKLCILLRDVQAGQAVQMSLVTLDILAGIQGWLRANGINSPLHTNSGYRSPLTNN---- 118
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
A+ S+H+ G A D +P VS SL + A+ LK GGVG+Y FLHID G +R+W
Sbjct: 119 HTEGAAKNSRHMYGMAWDGRVPQVSTESLARFAVYLKGGGVGFYQEKNFLHIDSGSLRTW 178
>gi|149914645|ref|ZP_01903175.1| hypothetical protein RAZWK3B_13669 [Roseobacter sp. AzwK-3b]
gi|149811438|gb|EDM71273.1| hypothetical protein RAZWK3B_13669 [Roseobacter sp. AzwK-3b]
Length = 231
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 60 KIYVVSTGSKAIVTFK-RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQ-- 116
+ T + +V F + E L+ L DW + I +DP + L + +
Sbjct: 86 SMRNAHTAEELLVRFHPVNGRLVPEHPDTLDHFLRDWRRNRVIPIDPFVTGSLALVVREA 145
Query: 117 -YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I SGYRT+ETN L R+ AR S H+ G+A+DF +PGV R + +A
Sbjct: 146 TRLGWSGTVQINSGYRTRETNADLRRKGIGAARNSLHLTGQAIDFVLPGVPPRRIGALAR 205
Query: 176 RLKRGGVGYYSKFLHIDVGRVRSW 199
+L GG+G Y+ F+HID GR RSW
Sbjct: 206 QLLPGGIGTYASFVHIDSGRRRSW 229
>gi|288957328|ref|YP_003447669.1| hypothetical protein AZL_004870 [Azospirillum sp. B510]
gi|288909636|dbj|BAI71125.1| hypothetical protein AZL_004870 [Azospirillum sp. B510]
Length = 219
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 60 KIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS 119
+ TG ++ GS + ++ L + L D + + +D DFL +I
Sbjct: 38 SLRNEHTGESFDGPYRDGSGPLPDAMTDLAKFLRDHRANKEGPVDVGTLDFLADILDAVG 97
Query: 120 VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKR 179
+ ILS +RT ETN ML+ R+ +A SQH++G+A+D +P L ++ A+ LKR
Sbjct: 98 QSKA-TILSAFRTPETNAMLAARSLGVAEHSQHLVGRALDITLPAR-LPDAHRSALDLKR 155
Query: 180 GGVGYY--SKFLHIDVGRVRSW 199
GGVG+Y S FLHID G +RSW
Sbjct: 156 GGVGWYPRSHFLHIDTGPLRSW 177
>gi|268601334|ref|ZP_06135501.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|291043836|ref|ZP_06569552.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|268585465|gb|EEZ50141.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|291012299|gb|EFE04288.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 194
Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 7 FRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVST 66
F++ + ++ +V V + + T L P + ++ +D ++ RT+ T
Sbjct: 3 FQMDRRNFLKKFVGVGALYTTGAAGLLLPKDV---VAATSMADFWSRD--RTINCKRADT 57
Query: 67 GSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHS-KQSIDMDPQLFDFLWEIQQYF---SVP 121
G K + F + + Y+ + L+ D + +D L + ++ +Q++
Sbjct: 58 GEKHEIRFFQQQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAMQEWARQSGRS 117
Query: 122 EY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
I I S YRT N + AR S H+ GKAVDF + GV + L ++A G
Sbjct: 118 NPVITINSAYRTPRRNATI----EGAARNSLHMRGKAVDFTMRGVGIGELEQMAKYYNVG 173
Query: 181 GVGYYSKFLHIDVGRVRSW 199
G+G Y+ F+H+D GRVR W
Sbjct: 174 GIGIYNSFVHLDTGRVRHW 192
>gi|58891418|gb|AAW83106.1| YegA [Neisseria gonorrhoeae]
Length = 196
Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 7 FRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVST 66
F++ + ++ +V V + + T L P + ++ +D ++ RT+ T
Sbjct: 5 FQMDRRNFLKKFVGVGALYTTGAAGLLLPKDV---VAATSMADFWSRD--RTINCKRADT 59
Query: 67 GSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHS-KQSIDMDPQLFDFLWEIQQYF---SVP 121
G K + F + + Y+ + L+ D + +D L + ++ +Q++
Sbjct: 60 GEKHEIRFFQQQNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAMQEWARQSGRS 119
Query: 122 EY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
I I S YRT N + AR S H+ GKAVDF + GV + L ++A G
Sbjct: 120 NPVITINSAYRTPRRNATI----EGAARNSLHMRGKAVDFTMRGVGIGELEQMAKYYNVG 175
Query: 181 GVGYYSKFLHIDVGRVRSW 199
G+G Y+ F+H+D GRVR W
Sbjct: 176 GIGIYNSFVHLDTGRVRHW 194
>gi|194098604|ref|YP_002001666.1| YegA [Neisseria gonorrhoeae NCCP11945]
gi|240080733|ref|ZP_04725276.1| YegA [Neisseria gonorrhoeae FA19]
gi|240112898|ref|ZP_04727388.1| YegA [Neisseria gonorrhoeae MS11]
gi|240115653|ref|ZP_04729715.1| YegA [Neisseria gonorrhoeae PID18]
gi|240117947|ref|ZP_04732009.1| YegA [Neisseria gonorrhoeae PID1]
gi|240123506|ref|ZP_04736462.1| YegA [Neisseria gonorrhoeae PID332]
gi|240128205|ref|ZP_04740866.1| YegA [Neisseria gonorrhoeae SK-93-1035]
gi|260440534|ref|ZP_05794350.1| YegA [Neisseria gonorrhoeae DGI2]
gi|268596853|ref|ZP_06131020.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268682135|ref|ZP_06148997.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|193933894|gb|ACF29718.1| YegA [Neisseria gonorrhoeae NCCP11945]
gi|268550641|gb|EEZ45660.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268622419|gb|EEZ54819.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 190
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 15/188 (7%)
Query: 18 YVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRG 77
+V V + + T L P + ++ +D ++ RT+ TG K + F +
Sbjct: 10 FVGVGALYTTGAAGLLLPKDV---VAATSMADFWSRD--RTINCKRADTGEKHEIRFFQQ 64
Query: 78 -SQYNQEGLSQLNRLLYDWHS-KQSIDMDPQLFDFLWEIQQYF---SVPEY-IYILSGYR 131
+ Y+ + L+ D + +D L + ++ +Q++ I I S YR
Sbjct: 65 QNGYDLDAYRNACWLMRDAKDGNAMVQIDVGLLNLMYAMQEWARQSGRSNPVITINSAYR 124
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHI 191
T N + AR S H+ GKAVDF + GV + L ++A GG+G Y+ F+H+
Sbjct: 125 TPRRNATI----EGAARNSLHMRGKAVDFTMRGVGIGELEQMAKYYNVGGIGIYNSFVHL 180
Query: 192 DVGRVRSW 199
D GRVR W
Sbjct: 181 DTGRVRHW 188
>gi|240142234|ref|YP_002966744.1| hypothetical protein MexAM1_META2p0556 [Methylobacterium extorquens
AM1]
gi|240012178|gb|ACS43403.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 207
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 1 MKKTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLK 60
+ + R L + +VA V + + + D + + L+
Sbjct: 5 LTRRSFLRGLASSVVAPAGTVAGLPVGAYAAAALAMPALVALLT---QDAMADTKSIPLR 61
Query: 61 IYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
++ +TG K + GS +N GL Q + +L D+ + D +L+ L+ +Q+ F
Sbjct: 62 LHNTNTGDKLAIDLFVGSDWNPTGLVQADYMLRDFRQNLVVQNDRRLYAALYVLQRAFVG 121
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI--PGVSLRSLYKIAIRLK 178
Y+ + SGYRT TN+ML R+ AR+S H +AVD+ I P +L + ++A
Sbjct: 122 DGYVKVNSGYRTTTTNEMLRRQGLGAARESFHTKARAVDYLIPNPNATLSEIARVAKGFH 181
Query: 179 RGGVGYYSKFLHIDVG-RVRSW 199
G V Y+ F+H+D G RSW
Sbjct: 182 IGAVALYNNFIHMDTGDPDRSW 203
>gi|322649620|gb|EFY46051.1| hypothetical protein SEEM675_16029 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 147
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + + + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
D+ + + +DP+LFD L+ +Q + + ++SGYR+ +TN L R+ +A+K
Sbjct: 71 HFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKK 130
Query: 150 SQHVLGK 156
+ G+
Sbjct: 131 ATIQKGR 137
>gi|313681306|ref|YP_004059044.1| peptidase m15a [Sulfuricurvum kujiense DSM 16994]
gi|313154166|gb|ADR32844.1| Peptidase M15A [Sulfuricurvum kujiense DSM 16994]
Length = 181
Score = 151 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 36 DLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDW 95
++I +S+ +D +++E+ + V+ G+ + F R + + G L R+ D
Sbjct: 21 NVIALSASTSLFADNKEKDEI----LSVIRNGTSYKIPFIRDGKIEENGYDDLCRVFADV 76
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVP---EYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
+ ++ MDP LF L + QQ+ S I + SGYRT+ TN + A S H
Sbjct: 77 RAGVAVRMDPNLFLILTKAQQWLSSNHINRPIILTSGYRTEHTNSI----TEGAAFNSMH 132
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
+ GKA D I G+ L ++ G+G Y F+H+D R R+W
Sbjct: 133 LYGKAADIKIEGIPADYLARLLRMCGGAGIGIYPTFVHVDTWRERAW 179
>gi|213420122|ref|ZP_03353188.1| hypothetical protein Salmonentericaenterica_21120 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 94
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
FD L+ +Q + + ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L
Sbjct: 1 FDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVAL 60
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 61 SNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 94
>gi|134287977|ref|YP_001110141.1| hypothetical protein Bcep1808_7376 [Burkholderia vietnamiensis G4]
gi|134132627|gb|ABO60253.1| protein of unknown function DUF882 [Burkholderia vietnamiensis G4]
Length = 173
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 68 SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF----SVPEY 123
+ V + G +++ +L L D + ++DP+LF L+ +Q++
Sbjct: 33 EEFRVVYWSGGRFDANNYVRLCYLFRDSNEDVVAEIDPRLFHLLFGLQRWVQLETGRLLP 92
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
I + SGYRT E N ML + S+H+ G+A D IPGV ++ +A + GGVG
Sbjct: 93 IDLTSGYRTPEHNSMLIA--EGASPTSEHLNGRAADIKIPGVQPGAVVSMARFFEMGGVG 150
Query: 184 YYSKFLHIDVGRVRSWT 200
Y+ F H+DVGRVR++T
Sbjct: 151 IYNSFTHVDVGRVRAFT 167
>gi|268598981|ref|ZP_06133148.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268603660|ref|ZP_06137827.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268686603|ref|ZP_06153465.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268583112|gb|EEZ47788.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268587791|gb|EEZ52467.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268626887|gb|EEZ59287.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 155
Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 48 SDLLDQEEVRTLKIYVVSTGSKAIVTFKRG-SQYNQEGLSQLNRLLYDWHS-KQSIDMDP 105
+D ++ RT+ TG K + F + + Y+ + L+ D + +D
Sbjct: 2 ADFWSRD--RTINCKRADTGEKHEIRFFQQQNGYDLDAYRNACWLMRDAKDGNAMVQIDV 59
Query: 106 QLFDFLWEIQQYF---SVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
L + ++ +Q++ I I S YRT N + AR S H+ GKAVDF
Sbjct: 60 GLLNLMYAMQEWARQSGRSNPVITINSAYRTPRRNATI----EGAARNSLHMRGKAVDFT 115
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
+ GV + L ++A GG+G Y+ F+H+D GRVR W
Sbjct: 116 MRGVGIGELEQMAKYYNVGGIGIYNSFVHLDTGRVRHW 153
>gi|262197372|ref|YP_003268581.1| hypothetical protein Hoch_4190 [Haliangium ochraceum DSM 14365]
gi|262080719|gb|ACY16688.1| protein of unknown function DUF882 [Haliangium ochraceum DSM 14365]
Length = 256
Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 51 LDQEEVRTLKIYVVSTGSK----AIVTFKRGSQYNQEG--------LSQLNRLLYDWHSK 98
+ + + I+ T + G + ++N +
Sbjct: 92 VGKPAPPVINIFNTWTHERMAADIAAEHPPGKRPPATAPVDLGVAVQRRVNAFFRCHFTG 151
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ +DMDP+LF L ++F + I+I+SG+R + N ML ++ R++ARKSQH LG A+
Sbjct: 152 EPMDMDPRLFAALVSAARHFGARD-IHIVSGFRAPKYNLMLRKKGREVARKSQHTLGSAI 210
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
DF + GV +R L+ + + GGVG Y S F+H+D G +R W
Sbjct: 211 DFRLIGVPVRKLHAWVTQQRLGGVGLYVGSGFVHMDTGPIRFW 253
>gi|146344295|ref|YP_001202151.1| hypothetical protein pQBR0405 [Pseudomonas fluorescens SBW25]
gi|146188107|emb|CAM96437.1| conserved hypothetical exported protein [Pseudomonas fluorescens
SBW25]
Length = 235
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF-KRGSQYNQEGLSQLNRLLYDW 95
Q + LLD + R L + +G KA + ++G ++ G + +L D
Sbjct: 34 FANNPGQRDWRAVLLDHD--RFLDLERPQSGEKARFYYYRKGQGWDPRGYAIACTILRDV 91
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSV---PEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
SK+++ +D +L D LW Y V P I + SGYRT E N L A S H
Sbjct: 92 VSKKTVQIDAKLLDLLWIATAYLRVKQLPAKIIVTSGYRTPEFNSSL----EGAALNSMH 147
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
V KA D IPGV +L + + GGVG Y F+H+DVG VR+W
Sbjct: 148 VKAKAADIRIPGVGTEALANLIKVIGVGGVGTYISKNFVHLDVGSVRTW 196
>gi|330959641|gb|EGH59901.1| hypothetical protein PMA4326_13899 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 249
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 37 LIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTF-KRGSQYNQEGLSQLNRLLYDW 95
Q + LLD + R L + +G KA + ++G ++ G + +L D
Sbjct: 48 FANNPGQRDWRAVLLDHD--RFLDLERPQSGEKARFYYYRKGQGWDPRGYAIACTILRDV 105
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSV---PEYIYILSGYRTQETNKMLSRRNRKIARKSQH 152
SK+++ +D +L D LW Y V P I + SGYRT E N L A S H
Sbjct: 106 VSKKTVQIDAKLLDLLWIATAYLRVKQLPAQIIVTSGYRTPEFNSSL----EGAALNSMH 161
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
V KA D IPGV +L + + GGVG Y F+H+DVG VR+W
Sbjct: 162 VKAKAADIRIPGVGTEALANLIKVIGVGGVGTYISKNFVHLDVGSVRTW 210
>gi|304415071|ref|ZP_07395811.1| peptidase M15 domain-containing hypothetical protein [Candidatus
Regiella insecticola LSR1]
gi|304283075|gb|EFL91498.1| peptidase M15 domain-containing hypothetical protein [Candidatus
Regiella insecticola LSR1]
Length = 143
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 64/168 (38%), Gaps = 51/168 (30%)
Query: 34 SPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
L S+ + L RTLK+ + TG F G YN+E L++LN
Sbjct: 25 GVALGFSLLSSNKALATLSTPTPRTLKLNNIHTGESIKAEFSNGIGYNKEELTRLNYFFR 84
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D+ + S H
Sbjct: 85 DFRQNE-------------------------------------------------NSLHK 95
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+GKA D I G+SL + + A+R++ GGVGYY S FLHID GRVR+W
Sbjct: 96 VGKAADLRIEGISLNHIRQAALRMRAGGVGYYPKSNFLHIDTGRVRTW 143
>gi|91791167|ref|YP_552117.1| hypothetical protein Bpro_5363 [Polaromonas sp. JS666]
gi|91701048|gb|ABE47219.1| protein of unknown function DUF882 [Polaromonas sp. JS666]
Length = 234
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 79/206 (38%), Gaps = 38/206 (18%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQE 83
+ P ++++P+ K + ++SD Q R + + T + V + Q E
Sbjct: 35 MSTSLPAFAVTPEWGKSP--TEITSDFWTQ--PRWVWLKRAGTNEEIKVVYWANGQLIPE 90
Query: 84 GLSQLNRLLYDWH----------------------SKQSID---MDPQLFDFLWEIQQYF 118
QL+ L D Q MDP + D L+ +
Sbjct: 91 AYQQLSWFLRDRRFAELLSSDSPIIAKAVSSGRLAKNQMTPWALMDPVVLDILYAYSAWL 150
Query: 119 ---SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
V + + SG+R +N++ A S H AVDFY+PGV + +
Sbjct: 151 HVYGVTRPLMVTSGFRHFISNEL----TEGAALASWHPKAGAVDFYVPGVPVEQTARFGQ 206
Query: 176 RLKRGGVGYY--SKFLHIDVGRVRSW 199
L GGVG Y F H+D GRVRSW
Sbjct: 207 WLAGGGVGLYLKKNFTHVDRGRVRSW 232
>gi|218659673|ref|ZP_03515603.1| hypothetical protein RetlI_08470 [Rhizobium etli IE4771]
Length = 169
Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 16/126 (12%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGL 85
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +GL
Sbjct: 22 VSSPVFVSTPS--------------QAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGL 67
Query: 86 SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNR- 144
QLNR L DW Q MDP+LFD +WE+ + +YI ++ G+R+ TN+ML R+R
Sbjct: 68 EQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPATNEMLRGRSRK 127
Query: 145 -KIARK 149
+ RK
Sbjct: 128 SGVCRK 133
>gi|329117911|ref|ZP_08246625.1| YegA like protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465992|gb|EGF12263.1| YegA like protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 183
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ VS A + ++L+ + + + + D E R+++
Sbjct: 4 RQFLSAAAVSAAGILFSDEAFALADNSGFWRRDRLLEMRRADTGERRSIRF--------- 54
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHS-KQSIDMDPQLFDFLWEIQQYF---SVPEY-IY 125
+ G Y Q+G L D +++D L + L+ +Q++ P+ I
Sbjct: 55 ---YAAGRGYLQDGYLAARWFLRDAKDGNAVVNIDAGLLNLLYGLQEWARIAGKPDPLIT 111
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
+ S YRT N + AR S H+ G+A D + G+SLR L +A K GG+G Y
Sbjct: 112 VNSAYRTARRNATI----EGAARNSMHIHGRAADLTMRGISLRQLADMAAHFKAGGIGIY 167
Query: 186 SKFLHIDVGRVRSW 199
F+H+D GR+R+W
Sbjct: 168 DSFIHLDTGRIRNW 181
>gi|240126801|ref|ZP_04739687.1| YegA [Neisseria gonorrhoeae SK-92-679]
gi|268685378|ref|ZP_06152240.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|295788812|ref|YP_003600427.1| YegA [Neisseria gonorrhoeae]
gi|268625662|gb|EEZ58062.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|294769553|gb|ADF36628.1| YegA [Neisseria gonorrhoeae]
gi|317165598|gb|ADV09137.1| YegA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 186
Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 46 MSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSK-QSIDMD 104
++ D + R L IY ++ + + F QY QEG L ++ D Q ++
Sbjct: 30 LADDSRFWKRNRVLSIYRPASRERKNIKFFADGQYIQEGYKALCWMMRDVVDNHQMHAIN 89
Query: 105 PQLFDFLWEIQQYF---SVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
L + L+ QQY P + + SG+RT+ N L A+ SQH+ G A DF
Sbjct: 90 INLINLLFAQQQYLRDLGRPNPELVLHSGFRTRRHNDSL----EGAAKNSQHLSGNAGDF 145
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRSW 199
+I SL L +A R + GG+G Y F+H D+G R W
Sbjct: 146 HIERASLSELAALARRFRVGGIGIYPTFIHNDIGVYREW 184
>gi|308274779|emb|CBX31378.1| hypothetical protein N47_E48900 [uncultured Desulfobacterium sp.]
Length = 313
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 29 PIYSLSPDLIKYHQQSSMSSDLLDQEEVR-------TLKIYVVSTGSKAIVTFKRG-SQY 80
P++ L L+ S+S+ + R L+++ G ++ G Y
Sbjct: 2 PVFFLFIVLMGCFAPYSISAQTESSDINRYFYSGDGQLQLFSKKNGKSFSGRYRLGFGIY 61
Query: 81 NQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
++ L Q+ ++ S + +L +F+ +Q I I SGYR E N L
Sbjct: 62 DESALKQICQVFDAPDSAPMTHLSLRLIEFIDFLQDRLGPGRQITITSGYRNPEYNTGLR 121
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
+ A+ S H G A DF I GV+ + L+ L GG GYY K +HIDVG RSW
Sbjct: 122 NKGGLAAKASLHQYGMAADFMIEGVNSKFLWNYVKALGFGGAGYYHGKTVHIDVGPARSW 181
>gi|134288294|ref|YP_001110457.1| hypothetical protein Bcep1808_6766 [Burkholderia vietnamiensis G4]
gi|134132944|gb|ABO59654.1| protein of unknown function DUF882 [Burkholderia vietnamiensis G4]
Length = 174
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 10/138 (7%)
Query: 68 SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF---SVPEYI 124
+ + + G + + RL+ D H+ +++ M P LFD L+ +Q +F + I
Sbjct: 41 EEVNEVYFANGKLVWPGYAAICRLMRDTHADKAVQMSPVLFDILYGMQGFFALHNQHRVI 100
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
+ SGYRT+ TN+ + S+H+ G+A D PGV + + ++A+ L+ GGVG+
Sbjct: 101 VLNSGYRTRLTNEAV-----GGVGDSRHMRGEAADIEFPGVPVNYMGRLALYLQGGGVGF 155
Query: 185 YS--KFLHIDVGRVRSWT 200
Y F+H+D G +R W
Sbjct: 156 YPSRGFVHVDDGALRKWN 173
>gi|121610615|ref|YP_998422.1| hypothetical protein Veis_3688 [Verminephrobacter eiseniae EF01-2]
gi|121555255|gb|ABM59404.1| protein of unknown function DUF882 [Verminephrobacter eiseniae
EF01-2]
Length = 179
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYV-VSTG-SKAIVTFKRGSQYNQEGLSQL 88
+ SS+ + + R++ + G + + + +G
Sbjct: 6 LLRQAAALPAILASSVGAQGDFWRQPRSIWLQRMTHLGREEVKAVYFADGRVVADGYLAA 65
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQ---QYFSVPEYIYILSGYRTQETNKMLSRRNRK 145
RLL D + Q++ M L D L IQ + + + SGYR+ TN +
Sbjct: 66 CRLLRDVRAGQAVQMSVVLLDILCGIQGFLRAYGHSIPLLTTSGYRSPATNASI----EG 121
Query: 146 IARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSW 199
R S H+ G+A D + GV L +IA L+ GGVG Y FLH+D GR+R W
Sbjct: 122 AVRSSMHIQGRAWDGRMQGVPADLLARIATYLQGGGVGLYQGRGFLHVDDGRLRFW 177
>gi|301059660|ref|ZP_07200568.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300446226|gb|EFK10083.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 320
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
K + + + A+ + + S ++ + + +Y
Sbjct: 3 KYMIVPFSLESATLLILLAAFV-SCSWAGEDPGAARRYFFSGDGK---ITLYSEKNHKTF 58
Query: 71 IVTFKRG-SQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSG 129
T++ G Y+++ L+++ R+ + +L +F+ ++ + + I I+SG
Sbjct: 59 SGTYRNGLGSYDKKALNEICRVFDAPRDPSQTGLSLRLIEFIDYLEDHLNRGAKITIISG 118
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKF- 188
YR E N L + + A+ S H G A D I GV +L+ L+ GG GYY
Sbjct: 119 YRRPEYNTKLREKGKLAAKASLHQYGMAADLKIQGVKAEALWHYVRDLEFGGTGYYHGSV 178
Query: 189 LHIDVGRVRSW 199
+HIDVG R W
Sbjct: 179 VHIDVGPARFW 189
>gi|262165525|ref|ZP_06033262.1| lipoprotein putative [Vibrio mimicus VM223]
gi|262025241|gb|EEY43909.1| lipoprotein putative [Vibrio mimicus VM223]
Length = 81
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
++I+SGYR+ TNK L +++ +A+KS H+ G+A+DF + GVSL+ + + AI L+ GGVG
Sbjct: 1 MHIVSGYRSPATNKQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQAGGVG 60
Query: 184 YYSK--FLHIDVGRVRSW 199
YY K F+HID G VR W
Sbjct: 61 YYPKSRFIHIDTGPVRQW 78
>gi|226330680|ref|ZP_03806198.1| hypothetical protein PROPEN_04600 [Proteus penneri ATCC 35198]
gi|225201475|gb|EEG83829.1| hypothetical protein PROPEN_04600 [Proteus penneri ATCC 35198]
Length = 85
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ + + ++SGYR+ TN L + + +A+KS H G+A+DF + G L + ++A+R
Sbjct: 1 MLNNNKPVELISGYRSLVTNNNLRQSSSGVAKKSYHTRGQAMDFRLVGTELSKVRQVALR 60
Query: 177 LKRGGVGYY--SKFLHIDVGRVRSW 199
+K GGVGYY S F+HID G VRSW
Sbjct: 61 MKAGGVGYYPRSNFVHIDTGPVRSW 85
>gi|124262600|ref|YP_001023070.1| hypothetical protein Mpe_B0056 [Methylibium petroleiphilum PM1]
gi|124261846|gb|ABM96835.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 234
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 77 GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF---SVPEYIYILSGYRTQ 133
+++G +L D + + + MDP+L D L IQ++ I +LSG+RT
Sbjct: 103 DGSVDRDGYGLACFMLRDVRAGKVVAMDPKLLDVLCGIQRWMEFNGRTADIELLSGFRTG 162
Query: 134 ETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHI 191
TN+ AR S H+ GKA D +I G S + + RGG G Y F+H+
Sbjct: 163 VTNQA----TEGAARNSMHLYGKAADIHIDGASSALVGAMVQVFNRGGTGVYLNRGFVHV 218
Query: 192 DVGRVRSW 199
D G R+W
Sbjct: 219 DTGAQRTW 226
>gi|110634276|ref|YP_674484.1| peptidase M15A [Mesorhizobium sp. BNC1]
gi|110285260|gb|ABG63319.1| Peptidase M15A [Chelativorans sp. BNC1]
Length = 459
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 73 TFKRGSQY----NQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYI 126
+++ Y + GL++L N LL S P+L L I++ F + +
Sbjct: 323 IYEQEEGYYQVASAAGLARLAPNGLLKQRESVDVSCFKPKLVHVLKTIERRFGKR--VVV 380
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY 185
SGYR+ N+ + A +SQH+ A D + GVS L + A L RGGVG Y
Sbjct: 381 TSGYRSPAYNRRVRG-----APRSQHMNCAAADIVVEGVSKWELAQFARSLPGRGGVGTY 435
Query: 186 --SKFLHIDVGRVRSWT 200
+ +H+DVG R W
Sbjct: 436 CHTNAVHVDVGPERDWN 452
>gi|222838323|gb|EEE76688.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 73 TFKRGSQY----NQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYI 126
+++ Y + GL++L N LL S P+L L I++ F + +
Sbjct: 382 IYEQEEGYYQVASAAGLARLAPNGLLKQRESVDVSCFKPKLVHVLKTIERRFGKR--VVV 439
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY 185
SGYR+ N+ + A +SQH+ A D + GVS L + A L RGGVG Y
Sbjct: 440 TSGYRSPAYNRRVRG-----APRSQHMNCAAADIVVEGVSKWELAQFARSLPGRGGVGTY 494
Query: 186 --SKFLHIDVGRVRSWT 200
+ +H+DVG R W
Sbjct: 495 CHTNAVHVDVGPERDWN 511
>gi|289825304|ref|ZP_06544576.1| hypothetical protein Salmonellentericaenterica_07926 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 78
Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+ ++SGYR+ +TN L R+ +A+KS H G+A+DF+I GV+L ++ K A+ ++ GGVG
Sbjct: 1 MQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVG 60
Query: 184 YY--SKFLHIDVGRVRSW 199
YY S F+HID G R W
Sbjct: 61 YYPRSNFVHIDTGPARHW 78
>gi|116750294|ref|YP_846981.1| hypothetical protein Sfum_2869 [Syntrophobacter fumaroxidans MPOB]
gi|116699358|gb|ABK18546.1| protein of unknown function DUF882 [Syntrophobacter fumaroxidans
MPOB]
Length = 497
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 4/193 (2%)
Query: 10 LKVIWIGLYVSVAS-FFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGS 68
+ + +S S F + + ++ L + + + L I + TG
Sbjct: 175 GRKFVFAMMMSKGSPFVLPAILFFLVLAAFPVRAADREAGRFFLMGDGK-LHIKNMHTGR 233
Query: 69 KAIVTFKR-GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL 127
+A V+ +++G +++ + +++ + P+L L + + I ++
Sbjct: 234 EASVSLLMPDGSLDEKGFDRVDEVFGFPTAEKGEHISPRLIFMLDYFSDLAAPGKTIRMV 293
Query: 128 SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK 187
S YR+ + N L +AR S H+ G A+DF IPGV ++L++I GVG+Y
Sbjct: 294 SAYRSPDYNSSLRNAGGNVARTSLHIDGMALDFNIPGVDGKALWQIIKEKNCCGVGHYGG 353
Query: 188 F-LHIDVGRVRSW 199
+H+D R R W
Sbjct: 354 ANIHLDSARPRFW 366
>gi|149924367|ref|ZP_01912734.1| hypothetical protein PPSIR1_11888 [Plesiocystis pacifica SIR-1]
gi|149814755|gb|EDM74327.1| hypothetical protein PPSIR1_11888 [Plesiocystis pacifica SIR-1]
Length = 196
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 21 VASFFVTSPIYSLSPDLIKYHQQSSMSSDL-LDQEEV--------RTLKIYVVSTGSKAI 71
+A+ + + +P + + +++ Q R + + + T
Sbjct: 9 LAAAVIGQAPSADAPASQPSKKDAYLAAKAEAGQGRPARARQRADRPVWAHNLRTHEIRA 68
Query: 72 VTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYR 131
+T + + + W + + + +L + ++F V E + ++SG+R
Sbjct: 69 LT----GPAGADTAKERSEFFRCWFTLEGGPISAELVARVIAAAEHFEVRE-VRVISGFR 123
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFL 189
+ N L ++ R++A +SQH KA+DF++PGV R+LY + GGVG+Y S+F+
Sbjct: 124 HPKYNLSLRKKGREVAERSQHTEAKAIDFFLPGVDTRALYDWLLDTHDGGVGFYPVSEFV 183
Query: 190 HIDVGRVRSW 199
H+D+GR R+W
Sbjct: 184 HVDLGRKRTW 193
>gi|16273553|ref|NP_439808.1| hypothetical protein HI1666 [Haemophilus influenzae Rd KW20]
gi|1176066|sp|P44284|Y1666_HAEIN RecName: Full=Uncharacterized protein HI_1666
gi|1574517|gb|AAC23311.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 127
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 31 YSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNR 90
SL + + ++ + R L ++TG + F ++ L +L+
Sbjct: 12 LSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDY 71
Query: 91 LLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNR 144
L+ D + Q MDP LF + IQ I ++ GYR+ TN M R++R
Sbjct: 72 LMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSR 126
>gi|153009244|ref|YP_001370459.1| peptidase M15A [Ochrobactrum anthropi ATCC 49188]
gi|151561132|gb|ABS14630.1| Peptidase M15A [Ochrobactrum anthropi ATCC 49188]
Length = 421
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + PQL L ++++F + + SGYR+ N+ ++
Sbjct: 302 GLARLAPNGLKVQRQTVDVACLKPQLVSMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 359
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
ARKS H++ A D I GVS + + A + RGGVG Y + +H+DVG R
Sbjct: 360 -----ARKSLHMICAAADIQIDGVSKWEVARFARSMSGRGGVGTYCHTTSVHVDVGPERD 414
Query: 199 WT 200
W
Sbjct: 415 WN 416
>gi|254706550|ref|ZP_05168378.1| Side tail fiber protein [Brucella pinnipedialis M163/99/10]
Length = 394
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 275 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 332
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 333 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 387
Query: 199 WT 200
W
Sbjct: 388 WN 389
>gi|254693976|ref|ZP_05155804.1| hypothetical protein Babob3T_04799 [Brucella abortus bv. 3 str.
Tulya]
Length = 388
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 269 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 326
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 327 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 381
Query: 199 WT 200
W
Sbjct: 382 WN 383
>gi|237815693|ref|ZP_04594690.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689489|ref|ZP_05152743.1| hypothetical protein Babob68_04799 [Brucella abortus bv. 6 str.
870]
gi|254697626|ref|ZP_05159454.1| hypothetical protein Babob28_07933 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730517|ref|ZP_05189095.1| hypothetical protein Babob42_04809 [Brucella abortus bv. 4 str.
292]
gi|256257737|ref|ZP_05463273.1| hypothetical protein Babob9C_10391 [Brucella abortus bv. 9 str.
C68]
gi|237788991|gb|EEP63202.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 390
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 271 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 328
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 329 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 383
Query: 199 WT 200
W
Sbjct: 384 WN 385
>gi|225627746|ref|ZP_03785783.1| Side tail fiber protein [Brucella ceti str. Cudo]
gi|254702013|ref|ZP_05163841.1| Side tail fiber protein [Brucella suis bv. 5 str. 513]
gi|254704554|ref|ZP_05166382.1| Side tail fiber protein [Brucella suis bv. 3 str. 686]
gi|254710340|ref|ZP_05172151.1| Side tail fiber protein [Brucella pinnipedialis B2/94]
gi|254714336|ref|ZP_05176147.1| Side tail fiber protein [Brucella ceti M644/93/1]
gi|254717235|ref|ZP_05179046.1| Side tail fiber protein [Brucella ceti M13/05/1]
gi|256031834|ref|ZP_05445448.1| Side tail fiber protein [Brucella pinnipedialis M292/94/1]
gi|260168968|ref|ZP_05755779.1| Side tail fiber protein [Brucella sp. F5/99]
gi|225617751|gb|EEH14796.1| Side tail fiber protein [Brucella ceti str. Cudo]
Length = 390
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 271 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 328
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 329 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 383
Query: 199 WT 200
W
Sbjct: 384 WN 385
>gi|256061354|ref|ZP_05451498.1| Side tail fiber protein [Brucella neotomae 5K33]
Length = 388
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 269 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 326
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 327 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 381
Query: 199 WT 200
W
Sbjct: 382 WN 383
>gi|239832163|ref|ZP_04680492.1| Titin [Ochrobactrum intermedium LMG 3301]
gi|239824430|gb|EEQ95998.1| Titin [Ochrobactrum intermedium LMG 3301]
Length = 452
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + PQL L ++++F + + SGYR+ N+ ++
Sbjct: 333 GLARLAPNGLKVQRQTVDVACLKPQLVSMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 390
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
ARKS H++ A D I GVS + + A + RGGVG Y + +H+DVG R
Sbjct: 391 -----ARKSLHMICAAADIQIDGVSKWEIARFARSMPGRGGVGTYCHTTSVHVDVGPERD 445
Query: 199 WT 200
W
Sbjct: 446 WN 447
>gi|189024419|ref|YP_001935187.1| hypothetical protein BAbS19_I12100 [Brucella abortus S19]
gi|189019991|gb|ACD72713.1| hypothetical protein BAbS19_I12100 [Brucella abortus S19]
Length = 410
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 291 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 348
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 349 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 403
Query: 199 WT 200
W
Sbjct: 404 WN 405
>gi|161619230|ref|YP_001593117.1| Side tail fiber protein [Brucella canis ATCC 23365]
gi|161336041|gb|ABX62346.1| Side tail fiber protein [Brucella canis ATCC 23365]
Length = 410
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 291 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 348
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 349 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 403
Query: 199 WT 200
W
Sbjct: 404 WN 405
>gi|306844181|ref|ZP_07476774.1| Side tail fiber protein [Brucella sp. BO1]
gi|306275456|gb|EFM57193.1| Side tail fiber protein [Brucella sp. BO1]
Length = 408
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 289 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 346
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 347 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 401
Query: 199 WT 200
W
Sbjct: 402 WN 403
>gi|62290183|ref|YP_221976.1| hypothetical protein BruAb1_1278 [Brucella abortus bv. 1 str.
9-941]
gi|82700105|ref|YP_414679.1| hypothetical protein BAB1_1296 [Brucella melitensis biovar Abortus
2308]
gi|297248575|ref|ZP_06932293.1| hypothetical protein BAYG_01534 [Brucella abortus bv. 5 str. B3196]
gi|62196315|gb|AAX74615.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616206|emb|CAJ11252.1| unnamed protein product [Brucella melitensis biovar Abortus 2308]
gi|297175744|gb|EFH35091.1| hypothetical protein BAYG_01534 [Brucella abortus bv. 5 str. B3196]
Length = 426
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 307 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 364
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 365 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 419
Query: 199 WT 200
W
Sbjct: 420 WN 421
>gi|256160017|ref|ZP_05457722.1| Side tail fiber protein [Brucella ceti M490/95/1]
gi|256255234|ref|ZP_05460770.1| Side tail fiber protein [Brucella ceti B1/94]
Length = 390
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 271 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 328
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 329 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 383
Query: 199 WT 200
W+
Sbjct: 384 WS 385
>gi|261214267|ref|ZP_05928548.1| peptidase M15A [Brucella abortus bv. 3 str. Tulya]
gi|260915874|gb|EEX82735.1| peptidase M15A [Brucella abortus bv. 3 str. Tulya]
Length = 428
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 309 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 366
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 367 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 421
Query: 199 WT 200
W
Sbjct: 422 WN 423
>gi|261314010|ref|ZP_05953207.1| peptidase M15A [Brucella pinnipedialis M163/99/10]
gi|261303036|gb|EEY06533.1| peptidase M15A [Brucella pinnipedialis M163/99/10]
Length = 434
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 315 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 372
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 373 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 427
Query: 199 WT 200
W
Sbjct: 428 WN 429
>gi|260566203|ref|ZP_05836673.1| peptidase M15A [Brucella suis bv. 4 str. 40]
gi|261219052|ref|ZP_05933333.1| peptidase M15A [Brucella ceti M13/05/1]
gi|261317903|ref|ZP_05957100.1| peptidase M15A [Brucella pinnipedialis B2/94]
gi|261322112|ref|ZP_05961309.1| peptidase M15A [Brucella ceti M644/93/1]
gi|261752579|ref|ZP_05996288.1| peptidase M15A [Brucella suis bv. 5 str. 513]
gi|261755238|ref|ZP_05998947.1| peptidase M15A [Brucella suis bv. 3 str. 686]
gi|261758461|ref|ZP_06002170.1| peptidase M15A [Brucella sp. F5/99]
gi|265988932|ref|ZP_06101489.1| peptidase M15A [Brucella pinnipedialis M292/94/1]
gi|260155721|gb|EEW90801.1| peptidase M15A [Brucella suis bv. 4 str. 40]
gi|260924141|gb|EEX90709.1| peptidase M15A [Brucella ceti M13/05/1]
gi|261294802|gb|EEX98298.1| peptidase M15A [Brucella ceti M644/93/1]
gi|261297126|gb|EEY00623.1| peptidase M15A [Brucella pinnipedialis B2/94]
gi|261738445|gb|EEY26441.1| peptidase M15A [Brucella sp. F5/99]
gi|261742332|gb|EEY30258.1| peptidase M15A [Brucella suis bv. 5 str. 513]
gi|261744991|gb|EEY32917.1| peptidase M15A [Brucella suis bv. 3 str. 686]
gi|264661129|gb|EEZ31390.1| peptidase M15A [Brucella pinnipedialis M292/94/1]
Length = 430
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 311 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 368
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 369 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 423
Query: 199 WT 200
W
Sbjct: 424 WN 425
>gi|260546728|ref|ZP_05822467.1| peptidase M15A [Brucella abortus NCTC 8038]
gi|260755011|ref|ZP_05867359.1| peptidase M15A [Brucella abortus bv. 6 str. 870]
gi|260758227|ref|ZP_05870575.1| peptidase M15A [Brucella abortus bv. 4 str. 292]
gi|260762054|ref|ZP_05874397.1| peptidase M15A [Brucella abortus bv. 2 str. 86/8/59]
gi|260884022|ref|ZP_05895636.1| peptidase M15A [Brucella abortus bv. 9 str. C68]
gi|260095778|gb|EEW79655.1| peptidase M15A [Brucella abortus NCTC 8038]
gi|260668545|gb|EEX55485.1| peptidase M15A [Brucella abortus bv. 4 str. 292]
gi|260672486|gb|EEX59307.1| peptidase M15A [Brucella abortus bv. 2 str. 86/8/59]
gi|260675119|gb|EEX61940.1| peptidase M15A [Brucella abortus bv. 6 str. 870]
gi|260873550|gb|EEX80619.1| peptidase M15A [Brucella abortus bv. 9 str. C68]
Length = 430
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 311 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 368
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 369 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 423
Query: 199 WT 200
W
Sbjct: 424 WN 425
>gi|256369698|ref|YP_003107208.1| putative peptidase M15A [Brucella microti CCM 4915]
gi|255999860|gb|ACU48259.1| putative peptidase M15A [Brucella microti CCM 4915]
Length = 434
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 315 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 372
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 373 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 427
Query: 199 WT 200
W
Sbjct: 428 WN 429
>gi|306840258|ref|ZP_07473032.1| Side tail fiber protein [Brucella sp. BO2]
gi|306289785|gb|EFM60967.1| Side tail fiber protein [Brucella sp. BO2]
Length = 426
Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 307 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 364
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 365 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 419
Query: 199 WT 200
W
Sbjct: 420 WN 421
>gi|261325355|ref|ZP_05964552.1| peptidase M15A [Brucella neotomae 5K33]
gi|261301335|gb|EEY04832.1| peptidase M15A [Brucella neotomae 5K33]
Length = 428
Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 309 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 366
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 367 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 421
Query: 199 WT 200
W
Sbjct: 422 WN 423
>gi|261222430|ref|ZP_05936711.1| peptidase M15A [Brucella ceti B1/94]
gi|265998397|ref|ZP_06110954.1| peptidase M15A [Brucella ceti M490/95/1]
gi|260921014|gb|EEX87667.1| peptidase M15A [Brucella ceti B1/94]
gi|262552865|gb|EEZ08855.1| peptidase M15A [Brucella ceti M490/95/1]
Length = 430
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 311 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 368
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 369 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 423
Query: 199 WT 200
W+
Sbjct: 424 WS 425
>gi|254719326|ref|ZP_05181137.1| Side tail fiber protein [Brucella sp. 83/13]
Length = 390
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++ N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 271 GLARFAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 328
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 329 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 383
Query: 199 WT 200
W
Sbjct: 384 WN 385
>gi|23502153|ref|NP_698280.1| hypothetical protein BR1277 [Brucella suis 1330]
gi|23348117|gb|AAN30195.1| conserved hypothetical protein [Brucella suis 1330]
Length = 426
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 307 GLARLAPNGLKVQRQTVDVAYLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 364
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 365 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 419
Query: 199 WT 200
W
Sbjct: 420 WN 421
>gi|306839101|ref|ZP_07471918.1| Side tail fiber protein [Brucella sp. NF 2653]
gi|306405648|gb|EFM61910.1| Side tail fiber protein [Brucella sp. NF 2653]
Length = 410
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++ N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 291 GLARFAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 348
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 349 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 403
Query: 199 WT 200
W
Sbjct: 404 WN 405
>gi|265984327|ref|ZP_06097062.1| peptidase M15A [Brucella sp. 83/13]
gi|264662919|gb|EEZ33180.1| peptidase M15A [Brucella sp. 83/13]
Length = 430
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++ N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 311 GLARFAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 368
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 369 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 423
Query: 199 WT 200
W
Sbjct: 424 WN 425
>gi|294852613|ref|ZP_06793286.1| hypothetical protein BAZG_01542 [Brucella sp. NVSL 07-0026]
gi|294821202|gb|EFG38201.1| hypothetical protein BAZG_01542 [Brucella sp. NVSL 07-0026]
Length = 434
Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 315 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 372
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DV R
Sbjct: 373 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVAPERD 427
Query: 199 WT 200
W
Sbjct: 428 WN 429
>gi|158320343|ref|YP_001512850.1| peptidase M15A [Alkaliphilus oremlandii OhILAs]
gi|158140542|gb|ABW18854.1| Peptidase M15A [Alkaliphilus oremlandii OhILAs]
Length = 120
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
H + +D +L + L ++ I + SGYRT E NK + + S
Sbjct: 15 FDCSHGDSVVKLDSRLLEKLQLLRDKL--NNPINVTSGYRTPECNKRVGGSS-----NSY 67
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGR 195
H+ G A D Y PG + + K A + G+G YS F+H+DV
Sbjct: 68 HMKGMAADIYSPGYTPAQIAKAAEEVGFTGIGIYSTFVHVDVRP 111
>gi|262196378|ref|YP_003267587.1| hypothetical protein Hoch_3192 [Haliangium ochraceum DSM 14365]
gi|262079725|gb|ACY15694.1| protein of unknown function DUF882 [Haliangium ochraceum DSM 14365]
Length = 273
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 62 YVVSTGSKAIVT-FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSV 120
Y V+ + V + + + E L+QL+ L + + +DP+L++ L I +F
Sbjct: 117 YAVNFREEIKVALYDDEGELDPEALAQLDHLFRCRRTGEERAVDPRLYEILSTIYDHFG- 175
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG 180
+ I ++SG+R QE + S+H A+D IPGV +R LY+ A L G
Sbjct: 176 QQRIELVSGFRDQEN------------QGSRHFHASAMDIKIPGVPMRKLYEYATSLDAG 223
Query: 181 --GVGYY--SKFLHID 192
G+G Y S F+H+D
Sbjct: 224 GMGIGKYPRSGFVHVD 239
>gi|260459834|ref|ZP_05808088.1| Peptidase M15A [Mesorhizobium opportunistum WSM2075]
gi|259034636|gb|EEW35893.1| Peptidase M15A [Mesorhizobium opportunistum WSM2075]
Length = 413
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 77 GSQYN---QEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYR 131
G Y G+++L N LL S + P L L I+ ++ + + SGYR
Sbjct: 277 GGSYQVASAAGMARLAPNGLLKQNESVDVACLKPSLVRVLKTIEGHYGRK--MMVTSGYR 334
Query: 132 TQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKF 188
N R A+ S H+ A D +PGVS L + RGGVG Y ++
Sbjct: 335 DPARN-----RRANGAKNSLHMYCAAADIQVPGVSKWELASYIRTMPGRGGVGTYCHTES 389
Query: 189 LHIDVGRVRSWT 200
+H+DVG R W
Sbjct: 390 VHVDVGPERDWN 401
>gi|319783905|ref|YP_004143381.1| peptidase M15A [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169793|gb|ADV13331.1| Peptidase M15A [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 416
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 76 RGSQYN---QEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
G Y G+++L N LL S + P L L I+ ++ + + SGY
Sbjct: 280 VGGSYQVASAAGMARLAPNGLLKQNESVDVACLKPSLVRVLKTIEGHYGRK--MTVTSGY 337
Query: 131 RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SK 187
R N R A+ S H+ A D +PGVS L + RGGVG Y ++
Sbjct: 338 RDPARN-----RRANGAKNSLHMYCAAADIQVPGVSKWELASYIRSMPGRGGVGTYCHTE 392
Query: 188 FLHIDVGRVRSWT 200
+H+DVG R W
Sbjct: 393 SVHVDVGPERDWN 405
>gi|13471064|ref|NP_102633.1| hypothetical protein mlr0938 [Mesorhizobium loti MAFF303099]
gi|14021808|dbj|BAB48419.1| mlr0938 [Mesorhizobium loti MAFF303099]
Length = 432
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 76 RGSQYN---QEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
G Y G+++L N LL S + P L L I+ ++ + + SGY
Sbjct: 295 IGGSYQVASAAGMARLAPNGLLKQNESVDVACLKPSLVRVLKTIEGHYGRK--MVVTSGY 352
Query: 131 RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SK 187
R N R A+ S H+ A D +PGVS L + RGGVG Y ++
Sbjct: 353 RDPARN-----RRANGAKNSLHMYCAAADIQVPGVSKWELANYIRTMPGRGGVGTYCHTE 407
Query: 188 FLHIDVGRVRSWT 200
+H+DVG R W
Sbjct: 408 SVHVDVGPERDWN 420
>gi|218533449|ref|YP_002424264.1| hypothetical protein Mchl_5604 [Methylobacterium chloromethanicum
CM4]
gi|218525752|gb|ACK86336.1| protein of unknown function DUF882 [Methylobacterium
chloromethanicum CM4]
Length = 212
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 17/195 (8%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ + GL ++A V ++ + + L + TG +
Sbjct: 6 RSLVTGLAGTLAGSMV--------GLAGADRAYAAALAGTVALPPPVRLWLRRDRTGEEV 57
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDW-HSKQSIDMDPQLFDFLWEIQQYF----SVPEYIY 125
+ YN L L+ LL D + ++ +DP+LFD L +Q +
Sbjct: 58 SAIVRTPDGYNTRDLLLLSWLLRDVGDASAAVWIDPRLFDLLASVQGAMSAVHGAVVPLI 117
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
+ SGYRT + N + AR S H+ G+A D G ++ RGGVG Y
Sbjct: 118 VTSGYRTPQHNAGI----EGAARASLHLAGRAADLRAAGYGADAVAVAGALCGRGGVGIY 173
Query: 186 SKFLHIDVGRVRSWT 200
F H+D+G+ R W
Sbjct: 174 PGFCHLDIGKARVWA 188
>gi|163843542|ref|YP_001627946.1| peptidase M15A [Brucella suis ATCC 23445]
gi|163674265|gb|ABY38376.1| Peptidase M15A [Brucella suis ATCC 23445]
Length = 127
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 8 GLARLAPNGLKVQRQTVDVACLKPELVTVLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 65
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRS 198
AR+S H++ A D I GVS + + A + +RGGVG Y + +H+DVG R
Sbjct: 66 -----ARRSLHMICAAADIQIDGVSKWEIARFARSMPRRGGVGTYCHTTSVHVDVGPERD 120
Query: 199 WT 200
W
Sbjct: 121 WN 122
>gi|254558220|ref|YP_003065745.1| hypothetical protein p1METDI0138 [Methylobacterium extorquens DM4]
gi|254265763|emb|CAX17126.1| conserved hypothetical protein, putative exported protein (Tat
pathway sequence) [Methylobacterium extorquens DM4]
Length = 216
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 17/195 (8%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ + GL ++A V + ++++ + VR L + TG +
Sbjct: 10 RSLIAGLAGTLAGSVV-------GLARVDRAYAAALAGTVALPPPVR-LWLRRDRTGEEV 61
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDW-HSKQSIDMDPQLFDFLWEIQQYF----SVPEYIY 125
+ YN L L+ LL D + ++ +DP LFD L +Q +
Sbjct: 62 SAIVRTPDGYNTRDLLLLSWLLRDVGDASAAVWIDPHLFDLLASVQGAMSAVHGAVVPLI 121
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY 185
+ SGYRT + N + AR S H+ G A D G ++ RGGVG Y
Sbjct: 122 VTSGYRTPQHNAGI----EGAARASLHLAGCAADLRAAGYGADAVAVAGALCGRGGVGIY 177
Query: 186 SKFLHIDVGRVRSWT 200
F H+D+G+ R W
Sbjct: 178 PGFCHLDIGKARVWA 192
>gi|163760325|ref|ZP_02167408.1| hypothetical protein HPDFL43_08684 [Hoeflea phototrophica DFL-43]
gi|162282724|gb|EDQ33012.1| hypothetical protein HPDFL43_08684 [Hoeflea phototrophica DFL-43]
Length = 364
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 42 QQSSMSSDLLDQEEVRTLKIYVVSTG-SKAIVTFKRGSQYNQEGLSQL--NRLLYDWHSK 98
+S SS L + R L ++T A + S GL++L N L
Sbjct: 203 AMASSSSALPGVDLKRALGTDSLNTQTQSAPAEIQLAS---AAGLARLAPNGLQIQTDRV 259
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ PQL L ++Q++ + + SGYR+ + N+ + A S+H +A
Sbjct: 260 EVDCFKPQLVRVLKTVEQHYG--RPVVVTSGYRSPKRNRRI-----GGASGSRHTSCEAA 312
Query: 159 DFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS L K + RGGVG Y ++ +HID+G R W
Sbjct: 313 DIQIEGVSKWQLAKYLRTMPNRGGVGTYCHTESVHIDIGNPRDWN 357
>gi|158320165|ref|YP_001512672.1| peptidase M15A [Alkaliphilus oremlandii OhILAs]
gi|158140364|gb|ABW18676.1| Peptidase M15A [Alkaliphilus oremlandii OhILAs]
Length = 120
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
H + +D +L + L ++ I I SGYRT E NK + + S H+ G
Sbjct: 19 HGGSVVKLDSKLLEKLQLLRVKL--NNPINITSGYRTLECNKRVGGSS-----NSYHMKG 71
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGR 195
A D Y PG + + K A + G+G YS F+H+DV
Sbjct: 72 MAADIYSPGYTPTQIAKAAEEVGFTGIGTYSNFVHVDVRP 111
>gi|320353711|ref|YP_004195050.1| peptidase M15A [Desulfobulbus propionicus DSM 2032]
gi|320122213|gb|ADW17759.1| Peptidase M15A [Desulfobulbus propionicus DSM 2032]
Length = 308
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 5/178 (2%)
Query: 24 FFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKR-GSQYNQ 82
F ++ L Q S L+ ++ + + +A V +N+
Sbjct: 6 FIFLYTVFLLFQATDSTATQPSERFFLMGSG---SMHLKNLRNDREARVHLLNPDGSFNE 62
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
+ ++ + ++ + P++ L + + + I I S YR+ E N + +
Sbjct: 63 RDFATVDWVFGFPTEEKGEHISPRMLFMLSYFAERMAPGKTINIESAYRSPEYNDQIRAQ 122
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
AR S H+ G A+DF++ GV + L++ + GG+G+Y K +H D GR R W
Sbjct: 123 GNNAARTSTHMDGLALDFWLEGVDGKQLWETIRQKNCGGIGHYGGKTVHFDAGRPRFW 180
>gi|121591906|ref|ZP_01679054.1| Tat [Vibrio cholerae 2740-80]
gi|121546233|gb|EAX56545.1| Tat [Vibrio cholerae 2740-80]
Length = 78
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 137 KMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVG 194
K L +++ +A+KS H+ G+A+DF + GVSL+ + + AI L+ GGVGYY S+F+HID G
Sbjct: 11 KQLRSKSKGVAKKSYHMSGQAIDFRLDGVSLKKIREAAISLQAGGVGYYPKSQFIHIDTG 70
Query: 195 RVRSW 199
VR W
Sbjct: 71 PVRQW 75
>gi|303229294|ref|ZP_07316089.1| peptidase M15 [Veillonella atypica ACS-134-V-Col7a]
gi|302516067|gb|EFL58014.1| peptidase M15 [Veillonella atypica ACS-134-V-Col7a]
Length = 153
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+D +L D L I++ V +YI SGYR E N + SQHVLG A D
Sbjct: 55 HIIDKRLVDLLDAIRERLGV--PLYINSGYRCPEHNAEV-----GGVSNSQHVLGTAADI 107
Query: 161 YIPGVSLRSLYKIAIRLKRGGVG--YYSKFLHIDV-GRVRSWT 200
G+ + L ++A G+G Y+ F+H+DV G W
Sbjct: 108 TYAGIDVDYLAQVAEECGADGIGCYYHQDFVHVDVRGYAARWN 150
>gi|150388698|ref|YP_001318747.1| peptidase M15A [Alkaliphilus metalliredigens QYMF]
gi|149948560|gb|ABR47088.1| Peptidase M15A [Alkaliphilus metalliredigens QYMF]
Length = 119
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q + +D QL + L +++ I + SGYRT E N+ + + SQH+LG+A
Sbjct: 22 QLVKLDHQLLEKLQQLRNQV--NAPINLTSGYRTPEHNQRV-----GGSPNSQHLLGRAA 74
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
D +PG S ++ K+A ++ G+G YS F H+DV
Sbjct: 75 DIQVPGHSPEAIAKMAEKIGFAGIGIYSTFTHVDV 109
>gi|313114003|ref|ZP_07799558.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623705|gb|EFQ07105.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 140
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+ +I +D +L L I+++F ++I SGYRT N L ++ SQH+ G
Sbjct: 28 RASDTILIDDELVVLLQCIREHFGAK--VHITSGYRTAAYNATLP----GASKNSQHIQG 81
Query: 156 KAVDFYIPGVSLRSLYKIAIRL--KRGGVGYYSK----------FLHIDVGRVRS-WT 200
+A DF++ GV + ++ A +L RGG+G Y K ++H+D +S WT
Sbjct: 82 RAADFWVEGVPVATVAAYAEKLLPGRGGIGRYPKDAAHPTRKTGWVHVDTRPNKSRWT 139
>gi|294792296|ref|ZP_06757444.1| peptidase M15A [Veillonella sp. 6_1_27]
gi|294457526|gb|EFG25888.1| peptidase M15A [Veillonella sp. 6_1_27]
Length = 128
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+D +L D L I++ V I + SGYR E N+ + SQHVLG A D
Sbjct: 31 HIIDKRLVDVLDRIRERLGV--PITVNSGYRCPEHNEEV-----GGVSDSQHVLGTAADI 83
Query: 161 YIPGVSLRSLYKIAIRLKRGGVG--YYSKFLHIDV-GRVRSW 199
G+ + L +IA G+G YY F+HIDV G W
Sbjct: 84 TYDGIDVDYLAEIAEECGADGIGKYYYQDFVHIDVRGYAARW 125
>gi|150389908|ref|YP_001319957.1| peptidase M15A [Alkaliphilus metalliredigens QYMF]
gi|149949770|gb|ABR48298.1| Peptidase M15A [Alkaliphilus metalliredigens QYMF]
Length = 119
Score = 107 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q + +D +L + L +++ + + SG+RT E NK + + SQH+LG+A
Sbjct: 22 QLVKLDHRLIEKLQQLRDQVGS--PVIVTSGFRTPEHNKRV-----GGSLNSQHLLGRAA 74
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHID---VGRVRSW 199
D +PG S ++ +IA L GVG Y+ F H+D G+ R W
Sbjct: 75 DIQVPGYSPEAIAQIADALGFTGVGIYATFTHVDVRTTGQSR-W 117
>gi|209549147|ref|YP_002281064.1| peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534903|gb|ACI54838.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 347
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P+L + + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 234 EVGCFKPELLNVIKTVESHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 286
Query: 159 DFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
D I GV+ + L RGGVG Y + +H+D G+ R W
Sbjct: 287 DIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSVHLDTGKSRDWN 331
>gi|90419539|ref|ZP_01227449.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336476|gb|EAS50217.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 356
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 68 SKAIVTFKRGSQYNQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIY 125
+++ S G+++L N L+ S ++ L L +++ + +
Sbjct: 221 EDVESSYRVAS--LSTGMARLAPNGLMVQRESVETSCFPSDLVRILRTVERRYGTK--VI 276
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGY 184
+ SGYR+ NK ++ AR+SQH+ KA D IPG ++ L RGGVG
Sbjct: 277 VTSGYRSPTHNKRVNG-----ARRSQHMGCKAADIIIPGADNMAVAAYVRSLPGRGGVGT 331
Query: 185 Y--SKFLHIDVGRVRSWT 200
Y +K +H+DVG R W
Sbjct: 332 YCHTKAIHVDVGHKRDWN 349
>gi|218463395|ref|ZP_03503486.1| hypothetical protein RetlK5_29950 [Rhizobium etli Kim 5]
Length = 340
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 227 EVGCFKPDLLKVIKMVENHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 279
Query: 159 DFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS + L RGGVG Y ++ +H+D G+ R W
Sbjct: 280 DIRIDGVSKWDVAAYIRSLPDRGGVGTYCHTESVHLDTGKSRDWN 324
>gi|58616275|ref|YP_195404.1| putative outer membrane protein [Azoarcus sp. EbN1]
gi|56315736|emb|CAI10380.1| putative outer membrane protein [Aromatoleum aromaticum EbN1]
Length = 178
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Query: 83 EGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYF---SVPEYIYILSGYRTQETNKML 139
+G++ L LL D + + + PQ+ L +Q + + I SG RT+ TN+ +
Sbjct: 52 KGIAYLQYLLRDVRANRQGLVHPQIVSNLAWVQAWLAHWGLKAPIVATSGLRTEVTNREV 111
Query: 140 SRRNRKIARKSQHV-----LGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHID 192
A +SQH+ + +AVDF++PG + + ++ + GGVG+Y SK +H+D
Sbjct: 112 -----GGAHQSQHLPDNNGVFRAVDFWVPGANSEDVARMLEWARTGGVGFYRSSKHIHLD 166
Query: 193 VGRVRSW 199
GR RSW
Sbjct: 167 AGRPRSW 173
>gi|218660636|ref|ZP_03516566.1| hypothetical protein RetlI_14104 [Rhizobium etli IE4771]
Length = 291
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 178 EVGCFKPDLLKVIKMVENHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 230
Query: 159 DFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS + L RGGVG Y ++ +H+D G+ R W
Sbjct: 231 DIRIDGVSKWDVAAYIRSLPDRGGVGTYCHTESVHLDTGKSRDWN 275
>gi|327190808|gb|EGE57876.1| hypothetical protein RHECNPAF_3710027 [Rhizobium etli CNPAF512]
Length = 351
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 238 EVGCFKPDLLKVIKTVENHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 290
Query: 159 DFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS + L RGGVG Y + +H+D G+ R W
Sbjct: 291 DIQIDGVSKWDIAAYIRSLPNRGGVGTYCHTDSVHLDTGKSRDWN 335
>gi|114706190|ref|ZP_01439093.1| hypothetical protein FP2506_17029 [Fulvimarina pelagi HTCC2506]
gi|114539036|gb|EAU42157.1| hypothetical protein FP2506_17029 [Fulvimarina pelagi HTCC2506]
Length = 303
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 92 LYDWHSKQSIDMDPQ-LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKS 150
L D P+ L + I+Q F + + + SGYR+ E N+ + A+ S
Sbjct: 191 LRVQRENVRTDCFPRQLVGMIRAIEQRFG--QRVVVTSGYRSPEHNRRVRG-----AKAS 243
Query: 151 QHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
QH+ KA D IP + R++ L RGGVG Y +K +HIDVG R W
Sbjct: 244 QHMACKAADIVIPNANNRAVAAFVKSLPGRGGVGTYCHTKAIHIDVGPKREWN 296
>gi|241204471|ref|YP_002975567.1| peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858361|gb|ACS56028.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 356
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
G++++ NRL + P L + ++ +F + + SGYR +E N
Sbjct: 226 GMTRIAPNRLHLQNDKVEVGCFKPDLLKVIKTVESHFG--RPVIVTSGYRDEEHN----- 278
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRS 198
R A +S H +A D I GV+ + L RGGVG Y + +H+D G+ R
Sbjct: 279 RLAGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPDRGGVGTYCHTDSVHLDTGKTRD 338
Query: 199 WT 200
W
Sbjct: 339 WN 340
>gi|86357506|ref|YP_469398.1| hypothetical protein RHE_CH01883 [Rhizobium etli CFN 42]
gi|86281608|gb|ABC90671.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 351
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 238 EVGCFRPDLLKVIKTVESHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 290
Query: 159 DFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS + L RGGVG Y + +H+D G+ R W
Sbjct: 291 DIQIDGVSKWDIAAYIRSLPARGGVGTYCHTDSVHLDTGKTRDWN 335
>gi|313113761|ref|ZP_07799335.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623933|gb|EFQ07314.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 140
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+ I +D +L + L +I+ +F + + I SG+RT N + + A+ SQ
Sbjct: 25 FRCSDNTDPIFIDSELVEILQKIRNHFG--KPVNITSGFRTASKNATI----KNAAKFSQ 78
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRL--KRGGVGYYSK---------FLHIDVGRVRS-W 199
H+ GKA D +I GV++ + A L RGG+G Y K ++HID +S W
Sbjct: 79 HLYGKAADIWISGVTVEQIAAYAETLLPNRGGIGRYPKEGHADRTHGWVHIDTRAAKSRW 138
>gi|162454469|ref|YP_001616836.1| hypothetical protein sce6189 [Sorangium cellulosum 'So ce 56']
gi|161165051|emb|CAN96356.1| hypothetical protein sce6189 [Sorangium cellulosum 'So ce 56']
Length = 366
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 68 SKAIVTFKR-GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYI 126
+ + + + L +L+RL+ SI +DP+L + + +F + +
Sbjct: 155 ERLDIQLLTPKGRLVPKALPKLSRLMR-ASPTASIPIDPRLATLIGMVSDHFGGR-PLRV 212
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS 186
+SGYR + S H G+A+DF + GV + + GVGYY
Sbjct: 213 VSGYRPYSPTQY--------TPHSNHNHGRAIDFMVEGVPNTVVRDFCRGFRNAGVGYYP 264
Query: 187 K--FLHIDV 193
F+H+DV
Sbjct: 265 NSTFVHLDV 273
>gi|116251860|ref|YP_767698.1| hypothetical protein RL2100 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256508|emb|CAK07592.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 355
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 242 EVGCFKPDLLKVIKIVESHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 294
Query: 159 DFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSWT 200
D I GV+ + L RGGVG Y + +H+D G+ R W
Sbjct: 295 DIQIDGVTKWDIAAYIRSLPDRGGVGTYCHTDSVHLDTGKTRDWN 339
>gi|190891569|ref|YP_001978111.1| hypothetical protein RHECIAT_CH0001970 [Rhizobium etli CIAT 652]
gi|190696848|gb|ACE90933.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 392
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 279 EVGCFRPDLLKVIKTVENHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 331
Query: 159 DFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS + L RGGVG Y + +H+D G+ R W
Sbjct: 332 DIQIDGVSKWDIAAYIRSLPDRGGVGTYCHTDSVHLDTGKSRDWN 376
>gi|218514535|ref|ZP_03511375.1| hypothetical protein Retl8_12957 [Rhizobium etli 8C-3]
Length = 189
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ P L + ++ +F + + SGYR +E N+++ A +S H +A
Sbjct: 76 EVGCFRPDLLKVIKTVENHFG--RPVIVTSGYRDEEHNRLV-----GGADESMHKSCEAA 128
Query: 159 DFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVRSWT 200
D I GVS + L RGGVG Y + +H+D G+ R W
Sbjct: 129 DIQIDGVSKWDIAAYIRSLPDRGGVGTYCHTDSVHLDTGKSRDWN 173
>gi|313112917|ref|ZP_07798563.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624822|gb|EFQ08131.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 131
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+D +L L I+ +F + I SGYRT N+ + A SQH G+A D +
Sbjct: 35 VDSELVQVLQAIRDHFGA--PVVITSGYRTAAHNRAV-----GGAVYSQHQYGRAADIRV 87
Query: 163 PGVSLRSLYKIAIRL--KRGGVGYYS--KFLHIDVGRVRS-WT 200
GV + L A L GG+G Y F+H+DV + +S W
Sbjct: 88 SGVPVEQLAAYAETLLPGTGGIGRYPAKGFVHVDVRKAKSRWA 130
>gi|160942728|ref|ZP_02089970.1| hypothetical protein FAEPRAM212_00204 [Faecalibacterium prausnitzii
M21/2]
gi|158446002|gb|EDP23005.1| hypothetical protein FAEPRAM212_00204 [Faecalibacterium prausnitzii
M21/2]
Length = 137
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+ +D L + L I+++F + + I S YRT N A+ SQ
Sbjct: 25 FRCKDGSDPVFIDTALAELLERIREHFG--KPVTITSAYRTPAHNAK-----AGGAKFSQ 77
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLK--RGGVGYYS-------KFLHIDVGR-VRSW 199
H+ G+A D + GVS+ ++ A L RGGVG Y ++H+D W
Sbjct: 78 HLYGRAADIRVQGVSVEAVAAYAESLMPDRGGVGRYPVKAGRAAGWVHVDTRADKARW 135
>gi|304393752|ref|ZP_07375680.1| peptidase M15A [Ahrensia sp. R2A130]
gi|303294759|gb|EFL89131.1| peptidase M15A [Ahrensia sp. R2A130]
Length = 319
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L L +++++ + + I SG+R+Q N+ + AR S H A D + GVS
Sbjct: 220 LVAILKRVERHYG--KPVVITSGFRSQSYNRRIRG-----ARNSTHTKCLAADIQVEGVS 272
Query: 167 LRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSW 199
L K + RGGVG Y +K +HID+G R+W
Sbjct: 273 KWQLAKYMRSIPGRGGVGTYCWTKSVHIDIGAKRAW 308
>gi|15965473|ref|NP_385826.1| lipoprotein [Sinorhizobium meliloti 1021]
gi|307302594|ref|ZP_07582350.1| Peptidase M15A [Sinorhizobium meliloti BL225C]
gi|15074654|emb|CAC46299.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306902958|gb|EFN33549.1| Peptidase M15A [Sinorhizobium meliloti BL225C]
Length = 439
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 81 NQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
N GL++L + L+ ++ P+L D L ++ ++ + + SG R + N+
Sbjct: 318 NLSGLARLTPSGLILQTEKVETGCFKPELLDILKTVEGHYGRK--VMVTSGLRAIKVNRK 375
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGR 195
R+S H +A D + GVS L + RGGVG Y + +HID+G
Sbjct: 376 ---------RQSLHTRCEAADIQVAGVSKWELANFLRNVPGRGGVGTYCHTNSVHIDIGP 426
Query: 196 VRSWT 200
R W
Sbjct: 427 QRDWN 431
>gi|227821968|ref|YP_002825939.1| hypothetical protein NGR_c14110 [Sinorhizobium fredii NGR234]
gi|227340968|gb|ACP25186.1| hypothetical protein NGR_c14110 [Sinorhizobium fredii NGR234]
Length = 461
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 81 NQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
N GL++L + L+ S ++ P L + L +++++ + + + SG R + N+
Sbjct: 340 NLSGLARLAPSGLILQTESVETGCFKPALMEMLKNVERHYG--QKVMVTSGLRPIKVNRK 397
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGR 195
R+S H +A D + GVS L L RGGVG Y ++ +HID+GR
Sbjct: 398 ---------RQSLHTRCEAADIQVKGVSKWDLADYLRSLPGRGGVGTYCHTESVHIDIGR 448
Query: 196 VRSWT 200
R W
Sbjct: 449 QRDWN 453
>gi|295104107|emb|CBL01651.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii SL3/3]
Length = 137
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 17/118 (14%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
+ +D L + L I+++F + + I S YRT N A+ SQ
Sbjct: 25 FRCKDGSDPVFIDTALAELLERIREHFG--KPVTITSAYRTPAHNAK-----AGGAKFSQ 77
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLK--RGGVGYYS-------KFLHIDVGR-VRSW 199
H+ G+A D + VS+ + A L RGGVG Y ++H+D W
Sbjct: 78 HLYGRAADIRVQDVSVEDVAAYAESLMPDRGGVGRYPAKAGRAAGWVHVDTRADKARW 135
>gi|323701158|ref|ZP_08112833.1| Peptidase M15A [Desulfotomaculum nigrificans DSM 574]
gi|323533760|gb|EGB23624.1| Peptidase M15A [Desulfotomaculum nigrificans DSM 574]
Length = 127
Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ P L + L +Q + + + SGYR N+ + S H+ G A D +
Sbjct: 33 IHPYLINKLEAFRQLAG--KPVLVNSGYRCPAHNRAVGGET-----NSYHLKGMAADIQV 85
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDV 193
PGV++ L ++A + GG+G Y F+H+DV
Sbjct: 86 PGVAVAELSRLAEQAGFGGIGVYQSQGFVHVDV 118
>gi|150396664|ref|YP_001327131.1| peptidase M15A [Sinorhizobium medicae WSM419]
gi|150028179|gb|ABR60296.1| Peptidase M15A [Sinorhizobium medicae WSM419]
Length = 433
Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 81 NQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
N GL++L N L+ ++ P+L + L ++ ++ + + SG R + N+
Sbjct: 312 NLSGLARLTPNGLILQTEKVETGCFKPELLNILRTVEAHYGRK--VMVTSGLRAIKVNRK 369
Query: 139 LSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGR 195
R+S+H +A D + GVS L ++ RGGVG Y ++ +HID+G
Sbjct: 370 ---------RQSRHTRCEAADIQVAGVSKWELADFLRKVPGRGGVGTYCHTESVHIDIGP 420
Query: 196 VRSWT 200
R W
Sbjct: 421 QRDWN 425
>gi|78355986|ref|YP_387435.1| hypothetical protein Dde_0939 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218391|gb|ABB37740.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 124
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + + I SG+R NK + A +S H LG A
Sbjct: 22 GHSAAVHPDLVDALQALRDHIG--KPLSITSGFRCNRHNKAV-----GGAEQSFHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDV---GRVRSW 199
D P GVS L IA + GG+G Y+ ++H+DV G+ R W
Sbjct: 75 ADVSCPAGVSPEELAVIAEEIPLFREGGIGVYASWVHLDVRQSGKAR-W 122
>gi|302343223|ref|YP_003807752.1| peptidase M15A [Desulfarculus baarsii DSM 2075]
gi|301639836|gb|ADK85158.1| Peptidase M15A [Desulfarculus baarsii DSM 2075]
Length = 124
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + I SG+R NK + A +S H LG A
Sbjct: 22 GHSAAVHPDLVDALQALRDRIG--KPLSITSGFRCNRHNKAV-----GGAEQSFHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDVGR--VRSW 199
D P GVS L IA + GG+G Y+ ++H+DV R W
Sbjct: 75 ADVSCPAGVSPEQLAVIAEEIPLFREGGIGVYASWVHLDVRRSGKARW 122
>gi|78356925|ref|YP_388374.1| hypothetical protein Dde_1882 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219330|gb|ABB38679.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 124
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + I SG+R NK + A +S H LG A
Sbjct: 22 GHSAAVHPDLVDALQALRDRVG--KPLSITSGFRCNRHNKAV-----GGAEQSFHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDV---GRVRSW 199
D P GVS L +A + GG+G Y+ ++H+DV G+ R W
Sbjct: 75 ADVSCPAGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKAR-W 122
>gi|213022682|ref|ZP_03337129.1| hypothetical protein Salmonelentericaenterica_08623 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 55
Score = 95.3 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 147 ARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A+KS H G+A+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 1 AKKSYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 55
>gi|114767568|ref|ZP_01446317.1| Phage protein [Pelagibaca bermudensis HTCC2601]
gi|114540378|gb|EAU43466.1| Phage protein [Roseovarius sp. HTCC2601]
Length = 1164
Score = 95.3 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 39/158 (24%)
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRL----------------LYDWHSK----QSIDMDP 105
TG A V E + +LNR+ + W +MDP
Sbjct: 642 TGDSARVA--------AEEIERLNRVYGEYQAGRAAAPKPVDMRPWEQPRSQFDPTNMDP 693
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
L ++Q + I S YR+ + N A+KSQH+ G+A D + +
Sbjct: 694 ATVRALAVLEQA--SVKTFNITSDYRSPDENDA-----AGGAKKSQHMHGRAFDIDVSDM 746
Query: 166 SLRS---LYKIAIRL-KRGGVGYYSKFLHIDVGRVRSW 199
S+ L K+A + GGVG YS LH D G R+W
Sbjct: 747 SIDERLELIKLARSVAGFGGVGVYSNSLHFDTGAERAW 784
>gi|116751240|ref|YP_847927.1| peptidase M15A [Syntrophobacter fumaroxidans MPOB]
gi|116700304|gb|ABK19492.1| Peptidase M15A [Syntrophobacter fumaroxidans MPOB]
Length = 124
Score = 95.3 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + I SG+R NK + A +S H LG A
Sbjct: 22 GHSAAVHPDLVDALQTLRDRIG--KPLSITSGFRCNRHNKAV-----GGAEQSFHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDV---GRVRSW 199
D P GVS L IA GG+G Y+ ++H+DV G+ R W
Sbjct: 75 ADVSCPAGVSPEELAVIAEEIPLFHEGGIGVYASWVHLDVRQSGKAR-W 122
>gi|313116359|gb|ADR32167.1| conserved hypothetical protein [Campylobacter jejuni]
Length = 131
Score = 95.3 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH LG A
Sbjct: 25 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNAEI-----GGAPKSQHTLGSAA 76
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ F+H+D G+ WT
Sbjct: 77 DFVVKGVKTEEVHQYVLNTYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 129
>gi|322420443|ref|YP_004199666.1| peptidase M15A [Geobacter sp. M18]
gi|320126830|gb|ADW14390.1| Peptidase M15A [Geobacter sp. M18]
Length = 124
Score = 94.9 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + I SG+R NK + A +S H LG A
Sbjct: 22 GHSAAVHPDLVDALQTLRDRIG--KPLSITSGFRCNRHNKAV-----GGAEQSFHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDV---GRVRSW 199
D P GVS +L IA + GG+G Y+ ++H+DV G+ R W
Sbjct: 75 ADVSCPAGVSPEALAVIAEEIPLFREGGIGVYASWVHLDVRQSGKAR-W 122
>gi|310828611|ref|YP_003960968.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308740345|gb|ADO38005.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 185
Score = 94.9 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+MDP+L + + ++ F I I SG R + N + S H+ G A D
Sbjct: 96 PAEMDPELLEKIEALRCAFD--RPIIITSGVRCERRNAEV-----GGIENSWHLSGHAAD 148
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGY-YSKFLHIDVGR 195
Y PGV + +A L G + Y Y +F H+++ R
Sbjct: 149 LYCPGVPCDEVAAVARTLGLGVIEYPYQQFDHVEIWR 185
>gi|295105292|emb|CBL02836.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii SL3/3]
Length = 140
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
I +D +L L +++ +F + I S YRT N + A+ SQ
Sbjct: 25 FRCKDGSDPIFIDSELVRILQKVRDHFGS--PVIINSAYRTAAYN---LSKKVGGAKFSQ 79
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRL--KRGGVGYYS--------KFLHIDV 193
H GKA D YI G+ + L + L +GG+G Y F+H+DV
Sbjct: 80 HQYGKAADIYIQGILITKLAEYVETLMPNKGGIGIYPIKTGVRNCAFVHVDV 131
>gi|295101609|emb|CBK99154.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 137
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 17/118 (14%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
I +D L L I+ +F + + I S YRT NK + A SQ
Sbjct: 25 FRCKDGTDPIFIDDVLVKLLQNIRNHFG--KAVTITSAYRTAAHNKAVKG-----ATYSQ 77
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRL--KRGGVGYYS-------KFLHIDVGRVRS-W 199
H G A D I GV + +L A L GG+G Y ++HID V+S W
Sbjct: 78 HCYGMAADIRIQGVDVETLATYAETLLKNTGGIGRYPVKTGRPAGWVHIDTRAVKSRW 135
>gi|114765587|ref|ZP_01444688.1| phage-related tail protein [Pelagibaca bermudensis HTCC2601]
gi|114542036|gb|EAU45069.1| phage-related tail protein [Roseovarius sp. HTCC2601]
Length = 1300
Score = 94.5 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 92 LYDWHSK----QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
+ W +MDP L ++Q + I S YR+ + N A
Sbjct: 812 MRPWEQPRSQFDPTNMDPATVRALAVLEQASG--KTFKISSDYRSPDENDA-----AGGA 864
Query: 148 RKSQHVLGKAVDFYIPGVSLRS---LYKIAIRL-KRGGVGYYSKFLHIDVGRVRSW 199
+KSQH+ G+A D + +S+ L K+A + GGVG YS LH D G R+W
Sbjct: 865 KKSQHMQGRAFDIDVSDMSIDERLELIKLARSVAGFGGVGVYSNSLHFDTGAERAW 920
>gi|325293186|ref|YP_004279050.1| hypothetical protein AGROH133_06852 [Agrobacterium sp. H13-3]
gi|325061039|gb|ADY64730.1| hypothetical protein AGROH133_06852 [Agrobacterium sp. H13-3]
Length = 418
Score = 94.5 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 83 EGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
GL+++ N L + P+L + +++++++ P + SGYR +
Sbjct: 298 SGLTRVSPNGLFLQTDHVEVGCFKPELVRMIKDVERHYNSPA--IVTSGYRPPK------ 349
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVR 197
I + S+H A D I GVS L + +RGGVG Y ++ +H+D G R
Sbjct: 350 ----GIRQGSKHYTCDAADIQIKGVSKWELASYLRSMPQRGGVGTYCHTESVHMDTGEAR 405
Query: 198 SWT 200
W
Sbjct: 406 DWN 408
>gi|300088726|ref|YP_003759248.1| peptidase M15A [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299528459|gb|ADJ26927.1| Peptidase M15A [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 124
Score = 94.1 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + I SG+R NK + A KS H LG A
Sbjct: 22 GHSAAVHPDLVDALQTLRDRIG--KPLSITSGFRCNRHNKAV-----GGAEKSFHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDV---GRVRSW 199
D P GVS +L IA + GG+G Y+ ++H+DV G+ R W
Sbjct: 75 ADVSCPAGVSPDALAVIAEEIPLFREGGIGVYASWVHLDVRQSGKAR-W 122
>gi|321442390|gb|ADW85704.1| conserved hypothetical protein [Campylobacter jejuni]
Length = 129
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNAEV-----GGAPKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|323652326|gb|ADX98407.1| conserved hypothetical protein [Campylobacter jejuni]
Length = 129
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNAEI-----GGAPKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|86151531|ref|ZP_01069745.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124245|ref|YP_004066249.1| hypothetical protein ICDCCJ07001_681 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841160|gb|EAQ58408.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017967|gb|ADT66060.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 129
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNAEI-----GGAPKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|313116005|ref|ZP_07801430.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310621674|gb|EFQ05204.1| peptidase M15 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 137
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 82 QEGLSQLN-----RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETN 136
++G QL+ R +I +D L L I+++F + + I SGYRT N
Sbjct: 10 KDGAKQLSPAFRVREFRCRDGTDTILIDEGLVVLLQCIREHFG--KPVAITSGYRTASHN 67
Query: 137 KMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL--KRGGVGYYS-------K 187
+ +R SQH+LG+A D + ++ A L GGVG Y
Sbjct: 68 TKV-----GGSRSSQHLLGRAADIQVQDTDPLAVAAYAESLMPGWGGVGRYPVRAGRAKG 122
Query: 188 FLHIDVGRVRS-WT 200
++H+D RS WT
Sbjct: 123 WVHVDTRPNRSRWT 136
>gi|317153341|ref|YP_004121389.1| peptidase M15A [Desulfovibrio aespoeensis Aspo-2]
gi|316943592|gb|ADU62643.1| Peptidase M15A [Desulfovibrio aespoeensis Aspo-2]
Length = 124
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
S + P L D L ++ + + I SG+R NK + A +S H LG A
Sbjct: 22 GHSAAVHPDLVDALQALRDRIG--KPLSITSGFRCNRHNKAV-----GGAAQSYHTLGMA 74
Query: 158 VDFYIP-GVSLRSLYKIAIR---LKRGGVGYYSKFLHIDV---GRVRSW 199
D P GVS L IA + GG+G Y+ ++H+DV G+ R W
Sbjct: 75 ADVSCPDGVSPGDLAVIAEEIPLFREGGIGVYASWVHLDVRQSGKAR-W 122
>gi|295104835|emb|CBL02379.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii SL3/3]
Length = 215
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 19/140 (13%)
Query: 72 VTFKRGSQYNQEGLSQLN-RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGY 130
+T+ +N++ + +L + L +I+ +F + + I S Y
Sbjct: 4 ITYSMKKDWNKKLSKNFCAYEFACNDRSDEFKVATELVETLQQIRDHFG--KPVLISSAY 61
Query: 131 RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRL----KRGGVGYYS 186
RT N + +R SQH LG A D +I GV + L K GG+GYYS
Sbjct: 62 RTPAYNISIGGSSR-----SQHCLGTAADIHINGVDPIRIALYVASLPYFQKHGGIGYYS 116
Query: 187 ------KFLHIDVGRVRS-W 199
F+HIDV S W
Sbjct: 117 RAQVTGGFVHIDVRETHSRW 136
>gi|283954032|ref|ZP_06371557.1| hypothetical protein C414_000080020 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794311|gb|EFC33055.1| hypothetical protein C414_000080020 [Campylobacter jejuni subsp.
jejuni 414]
Length = 129
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L D L EI++++ I I SGYR N + A KSQH LG A DF + GV
Sbjct: 29 ELIDILCEIREHY--NAPIIINSGYRCASHNAEI-----GGAAKSQHTLGSAADFVVKGV 81
Query: 166 SLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
+++ + +K Y+ F+H+D G+ WT
Sbjct: 82 KTEDVHQYVLQRYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|332877965|ref|ZP_08445697.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684089|gb|EGJ56954.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 180
Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
++ D L ++ + I I SGYRT E NK + S H+ A D + G
Sbjct: 30 KKVADNLEVLRAALGG-KPIIITSGYRTPEHNKKV-----GGVGGSAHLTASAADIVVRG 83
Query: 165 VSLRSLYKI------AIRLKRGGVGYYSKFLHIDVGRVR-SWT 200
+ + A +++ GG+G Y F+H D+ R W
Sbjct: 84 IPPAQVAATIEKLIDAGKMQEGGIGIYPNFVHYDIRGTRARWN 126
>gi|162455229|ref|YP_001617596.1| hypothetical protein sce6947 [Sorangium cellulosum 'So ce 56']
gi|161165811|emb|CAN97116.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 400
Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQET---NKMLSRRNRKIARKSQHVLG 155
Q + P+L L +I F I+I SGYR + + +RR SQH G
Sbjct: 251 QVRLVHPRLLWLLQQIADAFPRRG-IHIFSGYRPRAPTTRDAPAARRPTSGTHHSQHAEG 309
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRV 196
+A+D + GV +L++ L G G+Y F+H+DV R
Sbjct: 310 RAMDILVMGVPNTALFQFCRTLDDVGCGFYPNSKFVHVDVRRP 352
>gi|134298385|ref|YP_001111881.1| peptidase M15A [Desulfotomaculum reducens MI-1]
gi|134051085|gb|ABO49056.1| Peptidase M15A [Desulfotomaculum reducens MI-1]
Length = 124
Score = 91.8 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ +L L ++++ + + + SGYR N+ + S H G A D +
Sbjct: 32 IHLELVYKLEDLRRLLD--KPVLVNSGYRCPTNNRAV-----GGVVNSFHSKGMAADIRV 84
Query: 163 PGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVGRVRS-W 199
P ++++ + +A ++ GG+G Y+ +H+DV R+ W
Sbjct: 85 PRMAVKEIAHLAEKVGFGGIGIYASQVHVDVRDYRTRW 122
>gi|321442452|gb|ADW85765.1| hypothetical protein [Campylobacter jejuni]
Length = 129
Score = 91.8 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNANV-----GGAPKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|108862028|ref|YP_654144.1| 43 [Enterobacteria phage K1-5]
gi|40787114|gb|AAR90085.1| 43 [Enterobacteria phage K1-5]
Length = 114
Score = 91.8 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ +D +L + +++++F + I SG+R + N + A+ S H+ GKA D
Sbjct: 19 TSTVDAELLQVVTDVREHFGS--PVVITSGHRCAKHNANV-----GGAKNSMHLTGKAAD 71
Query: 160 FYIPGVSLRSLYKIAIRLKRG--GVGYYSKFLHIDV 193
+ G+ ++K +G G+G Y+ F HIDV
Sbjct: 72 IKVSGILPSEVHKYLTSKYQGKYGIGKYNSFTHIDV 107
>gi|83571771|ref|YP_425023.1| hypothetical protein PK1Ep57 [Enterobacteria phage K1E]
gi|83308222|emb|CAJ29454.1| gp43 protein [Enterobacteria phage K1E]
Length = 114
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ +D +L + +++++F + I SG+R + N + A+ S H+ GKA D
Sbjct: 19 TSTVDAELLQVVTDVREHFGA--PVVITSGHRCAKHNANV-----GGAKNSMHLTGKAAD 71
Query: 160 FYIPGVSLRSLYKI--AIRLKRGGVGYYSKFLHIDV 193
+ G++ ++ A + G+G Y F HIDV
Sbjct: 72 IKVQGITPYRVWSYLTARYPNKYGIGSYPNFTHIDV 107
>gi|57237252|ref|YP_178264.1| hypothetical protein CJE0241 [Campylobacter jejuni RM1221]
gi|57166056|gb|AAW34835.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
gi|315058119|gb|ADT72448.1| hypothetical protein CJS3_0707 [Campylobacter jejuni subsp. jejuni
S3]
Length = 129
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ + I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPVIINSGYRCKEHNAEV-----GGAPKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLITYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|37678811|ref|NP_933420.1| hypothetical protein VV0627 [Vibrio vulnificus YJ016]
gi|37197552|dbj|BAC93391.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 227
Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
D + L L I+ + I I S YRT E N+ + A S HV
Sbjct: 125 DLRTNV-----KNLASQLEVIRSEIG--KPIKITSAYRTPEYNRKI-----GGATNSLHV 172
Query: 154 LGKAVDFYIPGVSLRSLYKIAIRL------KRGGVGYYSKFLHIDV-GRVRSW 199
GKA D + GV + LY+ I L +GGVG Y+ F+H D+ G W
Sbjct: 173 TGKAADLQVSGVKPKDLYEKIISLINNGKITQGGVGLYTSFVHYDIRGTSARW 225
>gi|56698494|ref|YP_168870.1| hypothetical protein SPO3675 [Ruegeria pomeroyi DSS-3]
gi|56680231|gb|AAV96897.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 218
Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
S + +DPQ D L ++ + + S YR+ E N R A S+H+
Sbjct: 28 RSTGKVGIDPQAMDKLQALRDRLGA--PLMLNSAYRSPEHN-----RAEGGAPASEHLKA 80
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+A D + A + G G+Y + F+H+D+G R W
Sbjct: 81 RAFDVSMINHDPAEFEAAARAVGFTGFGFYRRNNFIHVDIGPAREW 126
>gi|159184923|ref|NP_354785.2| hypothetical protein Atu1800 [Agrobacterium tumefaciens str. C58]
gi|159140202|gb|AAK87570.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 384
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 17/123 (13%)
Query: 83 EGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
GL+++ N L + P+L + +++++++ P + SGYR +
Sbjct: 264 SGLTRVSPNGLFLQTDHVEVGCFKPELVRMIKDVERHYNSPA--IVTSGYRPPK------ 315
Query: 141 RRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK-RGGVGYY--SKFLHIDVGRVR 197
I + S+H A D I GVS L L RGGVG Y ++ +H+D G R
Sbjct: 316 ----GIRQGSKHYTCDAADIQIKGVSKWELATYLRSLPDRGGVGTYCHTESVHMDTGEAR 371
Query: 198 SWT 200
W
Sbjct: 372 DWN 374
>gi|86149124|ref|ZP_01067356.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85840482|gb|EAQ57739.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 129
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDTLCEIREHY--NAPIIINSGYRCKEHNAEV-----GGAPKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYK----------IAIRLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV + +++ I +K Y+ F+H+D G+ WT
Sbjct: 75 DFVVKGVKTKDVHQYILQRYDDKPFGIAIKHNFNDPYAGFVHLDTRGKKARWT 127
>gi|323947360|gb|EGB43366.1| peptidase M15 [Escherichia coli H120]
Length = 117
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+D +L L +++++F + + I SG R N +N A S HV G+A D
Sbjct: 22 TIDAELLVILEDVREHFG--KPVIINSGNRCPTHN-----KNVGGATNSYHVRGRAADIV 74
Query: 162 IPGVSLRSLYKI--AIRLKRGGVGYYSKFLHIDVGRVRS-WT 200
I GVS ++ + G+G Y F HID +S W
Sbjct: 75 IKGVSPDIVHAYLDGKYPTQYGLGKYKTFTHIDSRSKKSRWN 116
>gi|332876564|ref|ZP_08444325.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685490|gb|EGJ58326.1| peptidase M15 [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 181
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
++ D L ++ I I SGYRT E NK + S H+ A D + G
Sbjct: 30 KKVADQLEVLRAALGGR-PIIITSGYRTPEHNKKV-----GGVGGSAHLTASAADIVVRG 83
Query: 165 VSLRSLYKI------AIRLKRGGVGYYSKFLHIDVGRVR-SW 199
+ + A +++ GG+G Y F+H D+ R W
Sbjct: 84 IPPAQVAATIEKLIDAGKMQEGGIGIYKTFVHYDIRGTRARW 125
>gi|315929427|gb|EFV08626.1| peptidase M15 family protein [Campylobacter jejuni subsp. jejuni
305]
Length = 129
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNAEV-----GGAPKSQHTIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ +H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGLVHLDTRGKKARWT 127
>gi|23009460|ref|ZP_00050498.1| COG3108: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 381
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 127 LSGY--RTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
+ GY R ++ N R R SQH+LGKA+DF++ S+ + I +R++RGGVG+
Sbjct: 4 VCGYAAR-RQRNAAPPLLGRG--RDSQHMLGKAMDFFMTDASIDQIRAIGMRMQRGGVGW 60
Query: 185 Y----SKFLHIDVGRVRSWT 200
Y S F+H+DVG VRSW
Sbjct: 61 YPRSGSPFVHLDVGSVRSWP 80
>gi|310828751|ref|YP_003961108.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308740485|gb|ADO38145.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 200
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
MDP+L + + ++ YF + I I SG R + N + S H+ G A D
Sbjct: 111 PAAMDPELLEKIEALRCYFD--QPIIITSGVRCERRNAEV-----GGIPNSWHLSGHAAD 163
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVG 194
Y PGV + + A L G + Y +F H ++
Sbjct: 164 LYCPGVPYDEVARAARELGLGVIEYPDQQFDHCEIW 199
>gi|150388367|ref|YP_001318416.1| peptidase M15A [Alkaliphilus metalliredigens QYMF]
gi|149948229|gb|ABR46757.1| Peptidase M15A [Alkaliphilus metalliredigens QYMF]
Length = 118
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ +D Q+ L E+++ + I SGYRT N+ + + +SQH+LGKA D
Sbjct: 24 VRLDSQVLKKLQELREQTG--RPVLINSGYRTPSYNQQV-----GGSPRSQHLLGKAADI 76
Query: 161 YIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDVG--RVRSW 199
+PG+ L SL ++A + GG+G Y F+H+DV +VR W
Sbjct: 77 MVPGMELESLARVAEGIGFGGIGIYRTFIHVDVRSEKVR-W 116
>gi|89054812|ref|YP_510263.1| glycoside hydrolase family protein [Jannaschia sp. CCS1]
gi|88864361|gb|ABD55238.1| glycoside hydrolase family 24 [Jannaschia sp. CCS1]
Length = 341
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L +++ + I+ILSGYR+ N+++ S HV A+DFY+ G
Sbjct: 248 RTIQMLDRLREVLD--QPIHILSGYRSPAYNQLV-----GGVPNSLHVQFNAIDFYVGGA 300
Query: 166 SLRSLYKIAIRLKR------GGVGYYSKFLHIDV-GRVRSW 199
+ + + ++ R GG+G YS F+HID G+ W
Sbjct: 301 TRPAHWAAVLKDMRVAGEFRGGIGIYSSFVHIDTRGQNADW 341
>gi|212711503|ref|ZP_03319631.1| hypothetical protein PROVALCAL_02576 [Providencia alcalifaciens DSM
30120]
gi|212685959|gb|EEB45487.1| hypothetical protein PROVALCAL_02576 [Providencia alcalifaciens DSM
30120]
Length = 118
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ Q +L + L ++ +F + + ++SG R + N + A KSQH+LG
Sbjct: 20 ANQVES---KLVEILEGVRTHFG--KPVIVVSGRRCAKHNSKV-----GGAPKSQHLLGT 69
Query: 157 AVDFYIPGVSLRSLYKI--AIRLKRGGVGYYSKFLHIDV-GRVRSW 199
A D + V+ + + + G+G Y F HIDV G W
Sbjct: 70 AADIKVKDVAPKMVADYLESKSPNSYGIGRYKTFTHIDVRGYKARW 115
>gi|221369939|ref|YP_002521035.1| hypothetical protein RSKD131_4102 [Rhodobacter sphaeroides KD131]
gi|221162991|gb|ACM03962.1| Hypothetical Protein RSKD131_4102 [Rhodobacter sphaeroides KD131]
Length = 235
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+ P+ D L ++ + + + S YR+ E N RN A +S+H+ G A D
Sbjct: 47 KLHPEALDKLQALRDRLG--KPLIVRSAYRSPEHN-----RNVGGAPRSKHMDGTAFDIA 99
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + A + G G+Y S F+HID+G R W
Sbjct: 100 MSNHDPVAFEAAARAVGFLGFGFYPRSGFIHIDLGPARQW 139
>gi|169335886|ref|ZP_02863079.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
17244]
gi|169258624|gb|EDS72590.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
17244]
Length = 214
Score = 87.6 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
I +D L +I+ +F + ++I SGYRT N+ + A S
Sbjct: 27 FACHDGTDKIFIDIDHAKKLEKIRVHF--KKAVHINSGYRTVSYNRKI-----GGASGSY 79
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGR 195
H G+A D YI GV+++++ K A + G+G Y F+HID
Sbjct: 80 HTKGRAFDIYISGVNVKTIAKYAEAIGIKGIGCYPNANFVHIDSRP 125
>gi|261347053|ref|ZP_05974697.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
gi|282564843|gb|EFB70378.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
Length = 120
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+D +L L +++ +F + +Y++SG R + NK + A SQH+LG A D
Sbjct: 23 DVDVELVGVLEDVRAHF--NKPVYVVSGRRCAKHNKAV-----GGAEHSQHLLGTAGDIK 75
Query: 162 IPGVSLRSLYKI--AIRLKRGGVGYYSKFLHIDVGR-VRSW 199
+ V+ +++ + + GVG Y F HIDV + W
Sbjct: 76 VKDVTPKAVADYLESKYPSKYGVGRYKTFTHIDVRKNKARW 116
>gi|310829280|ref|YP_003961637.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308741014|gb|ADO38674.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 184
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
DMDP+L + + ++ YF I I SG R + N + S H+ G A D
Sbjct: 95 PADMDPELLEKIEALRCYF--NRPIIITSGVRCERRNAEV-----GGIENSWHLSGHAAD 147
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVG 194
Y PGV + +A L G + Y +F H ++
Sbjct: 148 LYCPGVPCDEVAWVARELGLGVIEYPDQQFDHCEIW 183
>gi|315928524|gb|EFV07826.1| peptidase M15 family protein [Campylobacter jejuni subsp. jejuni
305]
Length = 129
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
Q++ D +L D L EI++++ I I SGYR +E N + A KSQH +G A
Sbjct: 23 QNVPSD-ELIDILCEIREHY--NAPIIINSGYRCKEHNANV-----GGAPKSQHAIGSAA 74
Query: 159 DFYIPGVSLRSLYKIAI----------RLKRGGVGYYSKFLHIDV-GRVRSWT 200
DF + GV +++ + +K Y+ +H+D G+ WT
Sbjct: 75 DFVVKGVKTEEVHQYVLNTYGERSLGIAIKHNFNDPYAGLVHLDTRGKKARWT 127
>gi|295100636|emb|CBK98181.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 132
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 22/100 (22%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI 173
I+++F + ++I SGYRT N + ++ SQH+LG+A DFY+ GV + ++
Sbjct: 39 IREHFG--KPVHITSGYRTAAHNAAV-----GGSKSSQHLLGRAADFYVEGVDVATVAAY 91
Query: 174 AIRL--KRGGVGYYSK----------FLHIDV--GRVRSW 199
A L RGG+G Y K ++HID G+ R W
Sbjct: 92 AETLLPSRGGIGRYPKDAAHPKRRTGWVHIDTRAGKSR-W 130
>gi|212709260|ref|ZP_03317388.1| hypothetical protein PROVALCAL_00295 [Providencia alcalifaciens DSM
30120]
gi|212688172|gb|EEB47700.1| hypothetical protein PROVALCAL_00295 [Providencia alcalifaciens DSM
30120]
Length = 120
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+D +L L +++++F + +Y++SG R + N + A+ SQH+LG A D
Sbjct: 23 DVDTELVTVLEDVREHF--NQPVYVVSGRRCTKHNNAV-----GGAKHSQHLLGTAGDIK 75
Query: 162 IPGVSLRSLYKI--AIRLKRGGVGYYSKFLHIDVGR-VRSW 199
+ V+ + + + + G+G Y F HIDV + W
Sbjct: 76 VKNVAPKGVADYLESKYPNQYGIGRYKTFTHIDVRKNKARW 116
>gi|261347081|ref|ZP_05974725.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
gi|282564820|gb|EFB70355.1| peptidase M15 family protein [Providencia rustigianii DSM 4541]
Length = 108
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+D +L L +++ +F + +Y++SG R + NK + A SQH+LG A D
Sbjct: 11 DVDAELVGVLEDVRAHF--NKPVYVVSGRRCAKHNKAV-----GGAEHSQHLLGTAGDIK 63
Query: 162 IPGVSLRSLYKI--AIRLKRGGVGYYSKFLHIDVGR-VRSW 199
+ V+ +++ + + GVG Y F HIDV + W
Sbjct: 64 VKDVTPKAIADYLESKYPSKYGVGRYKTFTHIDVRKNKARW 104
>gi|5932373|gb|AAD56926.1|AF180145_18 hypothetical protein; zm12orf8 [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 132
Score = 84.9 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 12/124 (9%)
Query: 8 RILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVR--TLKIYVVS 65
++ + + +V++ +T+ SD L V+ L V
Sbjct: 4 KLGRRQLLTGFVALGGMAITAGK--------AQASLHQPGSDFLHWGNVKEKRLAFRNVH 55
Query: 66 TGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS--VPEY 123
T + F Y+ EGL+++N L DW + ++D L + L +I+ +
Sbjct: 56 TNERIDARFFGKHGYDDEGLAEINHALRDWRTGDITEVDTDLLNLLVKIRDRLDISANQP 115
Query: 124 IYIL 127
++
Sbjct: 116 FDLI 119
>gi|260576733|ref|ZP_05844719.1| Peptidase M15A [Rhodobacter sp. SW2]
gi|259021100|gb|EEW24410.1| Peptidase M15A [Rhodobacter sp. SW2]
Length = 224
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+I ++ + D L ++ + + + S YR+ N+ + A S+H+LG
Sbjct: 30 RGTGAIKINTEALDKLQSLRNRLG--KPMIVRSAYRSPSHNRAV-----GGAPASKHMLG 82
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A D + A + G GYY S F+HID+G RSW
Sbjct: 83 TAFDIAMSNHDPVPFEASARAVGFLGFGYYPRSGFMHIDLGPARSW 128
>gi|253734721|ref|ZP_04868886.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|253727304|gb|EES96033.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH130]
Length = 49
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
G+A+DF+I G++L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 1 TKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 49
>gi|31711688|ref|NP_853606.1| gp46 [Enterobacteria phage SP6]
gi|31505692|gb|AAP48785.1| gp46 [Enterobacteria phage SP6]
Length = 118
Score = 82.2 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ +D +L + ++++YF + + I SG+R + N+ + A S H+ GKA D
Sbjct: 21 TSTVDAELLQVVTDVREYFGL--PVVITSGHRCSDHNRRV-----GGAASSMHMTGKAAD 73
Query: 160 FYIPGVSLRSLYKIA--IRLKRGGVGYYSKFLHIDV--GRVRSW 199
+ G ++ + G+G Y+ F HIDV G+ R W
Sbjct: 74 IKVKGKDASAIASYLEHKYPDKYGIGRYNSFTHIDVRDGKAR-W 116
>gi|40787062|gb|AAR90036.1| 43 [Enterobacteria phage SP6]
Length = 116
Score = 81.8 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ +D +L + ++++YF + + I SG+R + N+ + A S H+ GKA D
Sbjct: 19 TSTVDAELLQVVTDVREYFGL--PVVITSGHRCSDHNRRV-----GGAASSMHMTGKAAD 71
Query: 160 FYIPGVSLRSLYKIA--IRLKRGGVGYYSKFLHIDV--GRVRSW 199
+ G ++ + G+G Y+ F HIDV G+ R W
Sbjct: 72 IKVKGKDASAIASYLEHKYPDKYGIGRYNSFTHIDVRDGKAR-W 114
>gi|163796591|ref|ZP_02190550.1| hypothetical protein BAL199_22847 [alpha proteobacterium BAL199]
gi|159178151|gb|EDP62696.1| hypothetical protein BAL199_22847 [alpha proteobacterium BAL199]
Length = 224
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
S+ ++ + D L ++ + + S YR+ N+ + A +S+H+ G
Sbjct: 30 RGSGSLRINEEALDKLQALRDRLG--RPLIVRSAYRSPAHNRAV-----GGAPRSKHMDG 82
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A D + + A + G G+Y S F+HID+G R W
Sbjct: 83 TAFDIAMANHDPVAFEAAAREVGFLGFGFYPRSGFMHIDLGPARQW 128
>gi|237757091|ref|ZP_04585531.1| twin-arginine translocation pathway signal [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690745|gb|EEP59913.1| twin-arginine translocation pathway signal [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 49
Score = 81.4 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ GKA+D I GV L L +AI LK GGVGYY S F+HID GR+R W
Sbjct: 1 MQGKAIDINISGVPLHILRDVAISLKAGGVGYYPSSNFVHIDTGRIRYW 49
>gi|226330681|ref|ZP_03806199.1| hypothetical protein PROPEN_04601 [Proteus penneri ATCC 35198]
gi|225201476|gb|EEG83830.1| hypothetical protein PROPEN_04601 [Proteus penneri ATCC 35198]
Length = 81
Score = 81.0 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 16/90 (17%)
Query: 11 KVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA 70
+ W+GL ++ L+ H +S L + L+ ++TG
Sbjct: 8 RRKWLGLGMAAVGL-----------GLLPSHAFAS-----LATPRPKILRFNNLNTGETI 51
Query: 71 IVTFKRGSQYNQEGLSQLNRLLYDWHSKQS 100
F G +YN+ L++LN L D+ +
Sbjct: 52 KAEFFDGKRYNKHELAKLNHLFRDYRQNKI 81
>gi|260577073|ref|ZP_05845052.1| Peptidase M15A [Rhodobacter sp. SW2]
gi|259020743|gb|EEW24060.1| Peptidase M15A [Rhodobacter sp. SW2]
Length = 224
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
++ + D L ++ + + +LS YR+ NK + A S+H+LG A D +
Sbjct: 37 INTEALDKLQTLRNRLG--KPLIVLSAYRSPAHNKAV-----GGAPASKHMLGTAFDISM 89
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A + G G Y S FLHID+G RSW
Sbjct: 90 ANHDPAQFAAAARAVGFLGFGTYPRSGFLHIDLGPARSW 128
>gi|213422555|ref|ZP_03355620.1| hypothetical protein Salmonentericaenterica_34377 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 77
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 25/67 (37%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLN 89
+ +L + S + L R L + + TG F G Y Q+ L++LN
Sbjct: 11 LLALGGVALGAAILPSPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLN 70
Query: 90 RLLYDWH 96
D+
Sbjct: 71 HFFRDYR 77
>gi|218672844|ref|ZP_03522513.1| hypothetical protein RetlG_15022 [Rhizobium etli GR56]
Length = 401
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY----SKFLHIDVGRVRSWT 200
GKA+DF+IP V L ++ I ++++ GGVG+Y S F+H+DVG VR+W
Sbjct: 1 GKAMDFFIPDVKLATIRAIGMKMQVGGVGFYPKSGSPFVHMDVGGVRAWP 50
>gi|310826037|ref|YP_003958394.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308737771|gb|ADO35431.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 186
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+MDP+L + E++ F + I I SG R + N + S H+ G A D
Sbjct: 97 PAEMDPELLGKVEELRCVFD--QPIIITSGVRCERRNAEV-----GGIENSWHLSGHAAD 149
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDVGR 195
Y PGV + A L G + Y +F H+++ R
Sbjct: 150 LYCPGVPCDEVAAAARALGLGVIEYPDRQFDHVEIWR 186
>gi|126462613|ref|YP_001043727.1| peptidase M15A [Rhodobacter sphaeroides ATCC 17029]
gi|126104277|gb|ABN76955.1| Peptidase M15A [Rhodobacter sphaeroides ATCC 17029]
Length = 224
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
+ L ++ + + + S YR+ E N+ + A +S+H+ A D +
Sbjct: 42 LERLQALRDRLG--KPLIVRSAYRSPEHNRAV-----GGATRSKHMECAAFDIAMANHDP 94
Query: 168 RSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ A + G G+Y S F+H+D+G R W
Sbjct: 95 VAFEAAAREVGFLGFGFYPRSGFIHVDLGPARQW 128
>gi|328545645|ref|YP_004305754.1| peptidase M15A [polymorphum gilvum SL003B-26A1]
gi|326415385|gb|ADZ72448.1| Peptidase M15A [Polymorphum gilvum SL003B-26A1]
Length = 224
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
S+ + + D L ++ + + + S YR+ E N+ + A +S+H+ G
Sbjct: 30 RGSGSLRIHDEALDKLQALRDRLG--KPLIVRSAYRSPEHNRAV-----GGAGRSKHLDG 82
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
A D + + A + G G+Y S F+H+D+G R W
Sbjct: 83 AAFDIAMANHDPVAFEAAAREVGFLGFGFYPRSGFIHVDLGPARQW 128
>gi|302876319|ref|YP_003844952.1| Peptidase M15A [Clostridium cellulovorans 743B]
gi|307687054|ref|ZP_07629500.1| Peptidase M15A [Clostridium cellulovorans 743B]
gi|302579176|gb|ADL53188.1| Peptidase M15A [Clostridium cellulovorans 743B]
Length = 220
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 117 YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
+ SGYR + N + S H+ A D + GV+ ++ A
Sbjct: 142 KLGGKST-TVNSGYRCAKHNAEV-----GGEDNSYHMKSVAADIQVSGVAPSTVASNAET 195
Query: 177 -LKRGGVGYYSKFLHIDV-GRVRSW 199
GG+G YS F H+DV G W
Sbjct: 196 IFGDGGLGRYSTFTHVDVRGYRARW 220
>gi|310828136|ref|YP_003960493.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308739870|gb|ADO37530.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 189
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
M+P L D + ++ F + + I SG R + N + +A S H+ G A D Y
Sbjct: 104 PMNPALLDKIEALRGVFG--QPVIITSGVRCEARNAEV----GGVA-WSFHMRGCAADLY 156
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDV 193
PGV++ L A + + YY+ ++H+++
Sbjct: 157 CPGVAVGELAGAAKDVGLNVLPYYAHGYIHVEI 189
>gi|241554339|ref|YP_002979552.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240863645|gb|ACS61307.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 513
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
Q+ L ++ + + S YR+ N L A+ SQH+ KAVDF + G
Sbjct: 419 QVARILDRFREEIGHS--VVLTSVYRSPAYNATLP----GAAKSSQHMQFKAVDFKVVGA 472
Query: 166 -SLRSLYKIAIRLKR-----GGVGYYSKFLHIDV-GRVRSW 199
+ R KI + GGVG Y F+H+D G W
Sbjct: 473 GTPRDWAKIIRSYRSQKMFEGGVGVYDTFVHVDTRGHNVDW 513
>gi|237750681|ref|ZP_04581161.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229373771|gb|EEO24162.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 146
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L D L EI+++F I I SGYR NK + A KS+H+ G AVDF + G+
Sbjct: 29 ELIDTLVEIREHF--NAPITINSGYRCPTHNKKI-----GGASKSRHIAGDAVDFVVKGI 81
Query: 166 SLRSLYKIAIRLKRG---GVGY-------YSKFLHIDV-GRVRSWT 200
+ +++ ++ G+ + F+H+D G W+
Sbjct: 82 PTKKVFEHVLKTYNDKPFGIAISINPNDEFRGFVHLDTRGYKARWS 127
>gi|310827073|ref|YP_003959430.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308738807|gb|ADO36467.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 188
Score = 78.3 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 90 RLLYDWHS--------KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
D + +M+P L D + ++ + I SG R + N +
Sbjct: 83 HFARDEYRCDCAGYCGGWPCEMNPALLDKIEALRCACGS--PVIITSGVRCEARNDEV-- 138
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDV 193
S H G A D Y PGV + L ++A L + YY S +LH+++
Sbjct: 139 ---GGVPWSFHKRGDAADLYCPGVPVGDLAQMAQALGMNVLPYYGSGYLHVEI 188
>gi|163798244|ref|ZP_02192176.1| hypothetical protein BAL199_08203 [alpha proteobacterium BAL199]
gi|159176492|gb|EDP61075.1| hypothetical protein BAL199_08203 [alpha proteobacterium BAL199]
Length = 190
Score = 77.5 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
++ + D L ++ + + + S YR+ N+ + A +S+H+ G A D
Sbjct: 2 RINEEALDKLQALRDRLG--KPLIVRSAYRSSAHNRAV-----GGAPRSKHMDGTAFDIA 54
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ + A + G G+Y S F+HID+G R W
Sbjct: 55 MANHDPVAFEAAAREVGFLGFGFYPRSDFMHIDLGPARQW 94
>gi|124005372|ref|ZP_01690213.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123989194|gb|EAY28772.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 572
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
L L ++ I I S YRT NK + + SQH+ KA D + G
Sbjct: 476 NLMKQLEILRTEMGAS--IAINSSYRTPSHNKAVGGKA-----NSQHLYAKAADIVVKGY 528
Query: 166 SLRSLY------KIAIRLKRGGVGYYSKFLHIDV-GRVRSW 199
+ + ++ A ++ +GG+G Y F+H D+ G W
Sbjct: 529 TPKQVHTKIEALTKAGKMTQGGLGLYKTFVHYDIRGTKARW 569
>gi|310829794|ref|YP_003962151.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308741528|gb|ADO39188.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 163
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+M P+L + + ++ F + I SG R + N + S H G A D
Sbjct: 74 PAEMAPELLEKIEALRYAFD--RPVIITSGVRCDQRNAEV-----GGIPNSWHCFGHAAD 126
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYSK-FLHIDVG 194
Y PG+ + ++A L G + Y + F H+++
Sbjct: 127 LYCPGIPYTEVARVARTLGLGVIEYPGQAFDHVEIW 162
>gi|294102090|ref|YP_003553948.1| Peptidase M15A [Aminobacterium colombiense DSM 12261]
gi|293617070|gb|ADE57224.1| Peptidase M15A [Aminobacterium colombiense DSM 12261]
Length = 125
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
D+ P+L L +I+ I+I SGYR NK + S H G A D
Sbjct: 21 DIKPKLLSLLEKIRSLVGT--PIFINSGYRCPTHNKRI-----GGVPNSWHTQGVAADIR 73
Query: 162 IPGVSLRSLYKIAIRL-------KRGGVGYYSKFLHIDV-----GRVRSW 199
S + +R + GG+G Y+ +H+DV G +R W
Sbjct: 74 QAKYSNNVFHSKVLRAYKDGKLSELGGLGLYNGRIHVDVHKPKDGHLRQW 123
>gi|149183036|ref|ZP_01861490.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp. SG-1]
gi|148849266|gb|EDL63462.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp. SG-1]
Length = 210
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ + + L L +++ + I SG+R+ N RN A S H G
Sbjct: 106 ASEVKENVRHLMYKLEALRKKLG-NVPVTINSGFRSINHN-----RNVGGASNSMHTYGV 159
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
A D G + +A G+ Y+ F+H+D
Sbjct: 160 AADIDPSGKTPSQTAAVAKTCGFSGIITYNTFVHVDS 196
>gi|310829439|ref|YP_003961796.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308741173|gb|ADO38833.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 197
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
MD +L + + +++YF + I I SG R + N + IA S H+ G A D
Sbjct: 108 PAAMDQELLEKIEALRRYFD--QPIIITSGVRCERRNAEV----GGIA-ASWHLSGHAAD 160
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGR 195
Y PGV + A L G + Y +F H ++ R
Sbjct: 161 LYCPGVPYDEVAAAARALGLGVIEYPDQQFDHCEIWR 197
>gi|326409301|gb|ADZ66366.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539010|gb|ADZ87225.1| side tail fiber protein [Brucella melitensis M5-90]
Length = 347
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 271 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 328
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 329 -----ARRSLHMICAAADIQIDGV 347
>gi|265999427|ref|ZP_06111686.1| peptidase M15A [Brucella melitensis bv. 2 str. 63/9]
gi|263093802|gb|EEZ17807.1| peptidase M15A [Brucella melitensis bv. 2 str. 63/9]
Length = 383
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 307 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 364
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 365 -----ARRSLHMICAAADIQIDGV 383
>gi|265995182|ref|ZP_06107739.1| peptidase M15A [Brucella melitensis bv. 3 str. Ether]
gi|262766295|gb|EEZ12084.1| peptidase M15A [Brucella melitensis bv. 3 str. Ether]
Length = 387
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 311 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 368
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 369 -----ARRSLHMICAAADIQIDGV 387
>gi|260565481|ref|ZP_05835965.1| peptidase M15A [Brucella melitensis bv. 1 str. 16M]
gi|260151549|gb|EEW86643.1| peptidase M15A [Brucella melitensis bv. 1 str. 16M]
Length = 383
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 307 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 364
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 365 -----ARRSLHMICAAADIQIDGV 383
>gi|256113834|ref|ZP_05454627.1| hypothetical protein Bmelb3E_13725 [Brucella melitensis bv. 3 str.
Ether]
Length = 347
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 271 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 328
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 329 -----ARRSLHMICAAADIQIDGV 347
>gi|17987005|ref|NP_539639.1| hypothetical protein BMEI0722 [Brucella melitensis bv. 1 str. 16M]
gi|17982657|gb|AAL51903.1| hypothetical protein BMEI0722 [Brucella melitensis bv. 1 str. 16M]
Length = 237
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 161 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 218
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 219 -----ARRSLHMICAAADIQIDGV 237
>gi|291004107|ref|ZP_06562080.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
erythraea NRRL 2338]
Length = 245
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I++ I + SG+R++ N+ + A SQH G A D + G
Sbjct: 149 RLMYKLEAIRKKAG-NAPITVNSGFRSKAHNQ-----SVGGAPNSQHTYGIAADIVVSGR 202
Query: 166 SLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
++ A G+ YS F H+D
Sbjct: 203 TVSQTIGYAQTSGLSGIIRYSSFTHVDS 230
>gi|134102502|ref|YP_001108163.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
erythraea NRRL 2338]
gi|133915125|emb|CAM05238.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
erythraea NRRL 2338]
Length = 243
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I++ I + SG+R++ N+ + A SQH G A D + G
Sbjct: 147 RLMYKLEAIRKKAG-NAPITVNSGFRSKAHNQ-----SVGGAPNSQHTYGIAADIVVSGR 200
Query: 166 SLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
++ A G+ YS F H+D
Sbjct: 201 TVSQTIGYAQTSGLSGIIRYSSFTHVDS 228
>gi|256045254|ref|ZP_05448149.1| hypothetical protein Bmelb1R_12237 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265991681|ref|ZP_06104238.1| peptidase M15A [Brucella melitensis bv. 1 str. Rev.1]
gi|263002626|gb|EEZ15040.1| peptidase M15A [Brucella melitensis bv. 1 str. Rev.1]
Length = 224
Score = 75.6 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 84 GLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
GL++L N L + + P+L L ++++F + + SGYR+ N+ ++
Sbjct: 148 GLARLAPNGLKVQRQTVDVACLKPELVTMLKTMERHF--RRPVMVTSGYRSPSYNRKVNG 205
Query: 142 RNRKIARKSQHVLGKAVDFYIPGV 165
AR+S H++ A D I GV
Sbjct: 206 -----ARRSLHMICAAADIQIDGV 224
>gi|311032631|ref|ZP_07710721.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp.
m3-13]
Length = 240
Score = 75.2 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
++ L I+ + + SG+R+ N RN A SQH G A D + GV
Sbjct: 145 RMMYKLEAIRVKIG-NRPMNVNSGFRSISHN-----RNVGGASNSQHTYGIAADISVSGV 198
Query: 166 SLRSLYKIAIRLKRGGVGYYS--KFLHIDV 193
S ++ A G G YS F H+D
Sbjct: 199 STTTVRNAAKS--SGFSGIYSEGSFTHMDS 226
>gi|322649621|gb|EFY46052.1| hypothetical protein SEEM675_16034 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 44
Score = 74.5 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 158 VDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+DF+I GV+L ++ K A+ ++ GGVGYY S F+HID G R W
Sbjct: 1 MDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW 44
>gi|149928297|ref|ZP_01916539.1| putative outer membrane protein [Limnobacter sp. MED105]
gi|149822952|gb|EDM82195.1| putative outer membrane protein [Limnobacter sp. MED105]
Length = 175
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEY---IYILSGYRTQETNKM 138
+G +L D + + + ++ Q + + SG RT TN +
Sbjct: 50 PDGFRTAAWMLRDVRANRVGVPNVEMLQLAAWAQVVLAEHHAYTVFEVTSGLRTHHTNSI 109
Query: 139 LSRRNRKIARKSQHV---LGK--AVDFYIPGVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
AR S+H+ G+ A+D GV++ L KI GGVG Y +H D+
Sbjct: 110 ----TEGAARNSRHLPDEHGQFYAMDIKPLGVNIDQLAKILQYPAFGGVGVYRSHVHFDI 165
>gi|220911923|ref|YP_002487232.1| peptidase M15A [Arthrobacter chlorophenolicus A6]
gi|219858801|gb|ACL39143.1| Peptidase M15A [Arthrobacter chlorophenolicus A6]
Length = 1050
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR--RNRKIARKSQHVLGK 156
+ + P L L +++ + I SGYR+ E N + R + K S+H G+
Sbjct: 576 EKARISPALVAALQKLRDRVG--RPVRITSGYRSWERNVAVYRNAKPPKKPTLSRHCSGQ 633
Query: 157 AVDFYIPGVSLRSLYKIAIR-LKRG-GVGYYSKFLHIDV-GRVRSWT 200
A D + G+S + K A+ L G GVG + F H+DV G+ +WT
Sbjct: 634 AADVTVAGMSGLEIAKAAVDVLGDGIGVGIGAGFAHVDVRGKWTAWT 680
>gi|310827971|ref|YP_003960328.1| Peptidase M15A [Eubacterium limosum KIST612]
gi|308739705|gb|ADO37365.1| Peptidase M15A [Eubacterium limosum KIST612]
Length = 186
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
M P+L + + ++ YF + I SG R + N+ + S H G A D Y
Sbjct: 100 MRPELLEKIEALRCYFG--RPVIITSGVRCEARNEEV-----GGVSWSFHTRGCAADLYC 152
Query: 163 PGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDV 193
PG+ + L + A L + YY S ++H+++
Sbjct: 153 PGIGVGDLAQTAKELGMNVLPYYSSGYIHVEI 184
>gi|332970134|gb|EGK09128.1| zinc D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
Length = 243
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L +++ + I SG+R+ + N RN A S H G + D + G
Sbjct: 147 RLMYKLEALRKKAG-NAPVVINSGFRSIQHN-----RNVGGASNSMHTYGISADIAVSGK 200
Query: 166 SLRSLYKIAIRLKRGGVGYYSKFLHIDV------GRVRSW 199
+ + +IA G+ S ++H D G R W
Sbjct: 201 TPAQVREIAKTCGFSGIERGSSYVHTDSRIEYPYGAQRWW 240
>gi|171913826|ref|ZP_02929296.1| glycoside hydrolase, family 24 [Verrucomicrobium spinosum DSM 4136]
Length = 242
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 12/99 (12%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+Q V + I S YR+ N A +S H+ A+D +
Sbjct: 149 TLRMADRLQDELGVR-LVTIASAYRSPAYNA----TCPGAAPQSFHLHNLALDL-VYDCP 202
Query: 167 LRSLYKIAIRLK-----RGGVGYYSKFLHIDV-GRVRSW 199
+ + A L+ RGG+G Y F HID G+ W
Sbjct: 203 PAKVAEAAHALRNRGFFRGGIGKYPSFTHIDTRGKNADW 241
>gi|162454721|ref|YP_001617088.1| hypothetical protein sce6439 [Sorangium cellulosum 'So ce 56']
gi|161165303|emb|CAN96608.1| hypothetical protein sce6439 [Sorangium cellulosum 'So ce 56']
Length = 375
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+DP L + + + + + ++SGYR ++ S H G+A+D
Sbjct: 133 VRLLDPGLLSRIDALARRYPGR-LVSLVSGYRP-------------QSQGSLHQTGRALD 178
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDV 193
I GV L L G GYY F+H+DV
Sbjct: 179 LRIAGVRNDELAAACRALADTGCGYYPNSSFVHVDV 214
>gi|254414659|ref|ZP_05028424.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
gi|196178507|gb|EDX73506.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
Length = 397
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ + ++ ++ + E+++Y I I S YR TN+ + A KS+H++G
Sbjct: 294 NNEVVEGILRVAHVMEEVREYLGAR-PITINSWYRDPVTNRKV-----GGATKSRHLVGD 347
Query: 157 AVDFYIPGVSLRSLYKIAIRL--KRGGVGYYSKFLHIDV-GRVRSWT 200
AVDF + G+S + + RGG+ S F HIDV G W+
Sbjct: 348 AVDFVVQGISPPQVNQRLESWWGNRGGLASASSFTHIDVRGYRARWS 394
>gi|310826229|ref|YP_003958586.1| Peptidase M15A [Eubacterium limosum KIST612]
gi|308737963|gb|ADO35623.1| Peptidase M15A [Eubacterium limosum KIST612]
Length = 191
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 90 RLLYD-WHSKQSIDMD-------PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
D + + D P L + ++Q + I SG R +E N+ +
Sbjct: 86 HFARDEYRCDCAGYCDGFPAEPQPGLVSRIEALRQAVGA--PVIITSGVRCEERNEEV-- 141
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDV 193
+A S H G A D Y PGV + +L +A + YY S ++H+++
Sbjct: 142 --GGVA-WSFHKRGAAADLYSPGVPVGTLAALAKDCGLNVLPYYSSGYVHVEI 191
>gi|310826518|ref|YP_003958875.1| Peptidase M15A [Eubacterium limosum KIST612]
gi|308738252|gb|ADO35912.1| Peptidase M15A [Eubacterium limosum KIST612]
Length = 182
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
M+P L + + +++Y+ + + I SG R + N + +A S H G A D
Sbjct: 95 PARMNPVLLERIEALREYYGL--PVVITSGVRCEGRNTEV----GGVA-WSFHKRGDAAD 147
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDV 193
Y PGV++ L + A L + YY S ++H++V
Sbjct: 148 LYCPGVAVGDLAQTAKDLGMNVLPYYASGYIHVEV 182
>gi|300785514|ref|YP_003765805.1| muramoyl-pentapeptide carboxypeptidase [Amycolatopsis mediterranei
U32]
gi|299795028|gb|ADJ45403.1| putative muramoyl-pentapeptide carboxypeptidase [Amycolatopsis
mediterranei U32]
Length = 242
Score = 72.5 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ + I + SG+R+ N + A S H+ G A D +PGV+ ++
Sbjct: 149 KLEALRKKLG-NKPITVNSGFRSIAHNAEI-----GGASDSMHLYGTAADLNVPGVANKT 202
Query: 170 LYKIAIRLKRGGVGYY-SKFLHIDVGRV--RSW 199
+Y+ A G+ Y + H+D RSW
Sbjct: 203 VYQKAETCGFSGLETYNTDHQHVDSRADLGRSW 235
>gi|117925354|ref|YP_865971.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117609110|gb|ABK44565.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 132
Score = 72.5 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
MDPQ + L E++ + + I + S YR N +S H G+AVD
Sbjct: 26 KMDPQFMERLEELRMAYG--KPIIVNSAYRCPNHNASVSTTGSNGP----HTTGRAVDVQ 79
Query: 162 IPGVSLRSLYKIAIRLKRGGVG------YYSKFLHIDV 193
+ G +L +A+ G+G + S+F+H+D
Sbjct: 80 VSGEDAHTLMALAMHHGFTGIGVSQRGQHKSRFIHLDT 117
>gi|290955225|ref|YP_003486407.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces scabiei 87.22]
gi|260644751|emb|CBG67836.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces scabiei 87.22]
Length = 249
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ + I + SG+R+ N + A S H+ G A D +PGV+ ++
Sbjct: 156 KLEALRKKLG-DKPITVNSGFRSIAHNAEI-----GGASDSMHLYGTAADLDVPGVATKT 209
Query: 170 LYKIAIRLKRGGVGYYS-KFLHIDVGRV--RSW 199
+Y+ A G+ Y+ H+D R W
Sbjct: 210 VYQKAETCGFSGLERYTVDHQHVDSRADLGRDW 242
>gi|310828993|ref|YP_003961350.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308740727|gb|ADO38387.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 186
Score = 71.4 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+MDP+L + + ++ + + I SG R N+ + +A S H G A D
Sbjct: 96 PAEMDPELLERIEALRMACG--QPVIITSGVRCAARNEEV----GGVA-WSFHKKGMAAD 148
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHID 192
Y PG+ + L A + YY S ++H++
Sbjct: 149 LYCPGMGIGDLAAQAQETGLNILPYYSSGYIHVE 182
>gi|134300095|ref|YP_001113591.1| peptidase M15A [Desulfotomaculum reducens MI-1]
gi|134052795|gb|ABO50766.1| Peptidase M15A [Desulfotomaculum reducens MI-1]
Length = 80
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+ S YR N+ + A S H+ G A D + ++ + + +A + G+G
Sbjct: 5 FKLASNYRCPPHNRAV-----GGAVNSLHLKGMAADIRVLEMTAKEITHLAEKAGFDGIG 59
Query: 184 YYSK--FLHIDV-GRVRSW 199
Y F+H+DV G W
Sbjct: 60 LYPSQCFVHVDVRGYCARW 78
>gi|229604965|ref|YP_002875665.1| hypothetical protein VPP93_gp41 [Vibrio phage VP93]
gi|227977010|gb|ACP44112.1| hypothetical protein VPP93_gp41 [Vibrio phage VP93]
Length = 137
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 115 QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS------LR 168
+++F E + + SGYR NK + A S+H+ G AVD ++ L+
Sbjct: 36 REHFG--EPLKVESGYRCPVHNKAV-----GGAENSRHLHGDAVDLHLLNKDRGNFQKLQ 88
Query: 169 SLYKIAIRLK-RGGVGYYSKFLHIDV-GRVRSW 199
LY A+ L GGVG Y +H+D G W
Sbjct: 89 KLYDTALALNPNGGVGLYDWGVHVDTRGEKARW 121
>gi|310827583|ref|YP_003959940.1| Peptidase M15A [Eubacterium limosum KIST612]
gi|308739317|gb|ADO36977.1| Peptidase M15A [Eubacterium limosum KIST612]
Length = 190
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+L + + ++ YF + I SG R + N+ + S H G A D Y PG
Sbjct: 108 PELLEKIEALRCYFG--RPVIITSGVRCEARNEEV-----GGVSWSFHKRGCAADLYCPG 160
Query: 165 VSLRSLYKIAIRLKRGGVGYY-SKFLHIDV 193
V + L A + YY S ++H+++
Sbjct: 161 VGVGDLAAGAKDCGLNVLPYYSSGYIHVEI 190
>gi|310828260|ref|YP_003960617.1| peptidase M15A [Eubacterium limosum KIST612]
gi|308739994|gb|ADO37654.1| peptidase M15A [Eubacterium limosum KIST612]
Length = 199
Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+DM+P+L + + ++ F + I SG R N+ + S H G A D
Sbjct: 110 PVDMNPELLEKIEALRCTFDC--PVIITSGVRCVARNEEV-----GGVSWSFHKRGCAAD 162
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYS-KFLHIDV 193
Y PGV++ L A L + YYS +LH++V
Sbjct: 163 LYCPGVAVGDLALAAKELGMNVLPYYSQGYLHVEV 197
>gi|227539919|ref|ZP_03969968.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227240197|gb|EEI90212.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 124
Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 106 QLFDFLWEIQQYFSVPEYIYIL-SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+L L ++ Y + I SGYRT NK + A SQH+ A D + G
Sbjct: 30 RLAQNLQNLRDYIGT--AVVITGSGYRTAIHNKKVKG-----ALHSQHLTASAADINVKG 82
Query: 165 VSLRSLYKIAIR------LKRGGVGYYSKFLHIDVGRVR-SW 199
+ L I + + GG+G Y FLH D+ V+ W
Sbjct: 83 YTPDQLAVIIEKLISKGVMAEGGIGIYKTFLHYDIRGVKVRW 124
>gi|220903529|ref|YP_002478841.1| peptidase M15A [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219867828|gb|ACL48163.1| Peptidase M15A [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 127
Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D L E+++ I I SG+R NK + SQH+ A D P
Sbjct: 36 DSESMDALQELRESLG--RPIVITSGHRCSAHNKAV-----GGVESSQHLK-IAFDCACP 87
Query: 164 GVSLRSLYKIAIRLKRGGVGYYS--KFLHIDVGRVRSWT 200
S K A+ G+G Y F+H+D+G R WT
Sbjct: 88 ANEQDSFVKKAVDAGFRGIGRYPRRGFVHLDMGPRRQWT 126
>gi|294632792|ref|ZP_06711351.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces sp. e14]
gi|292830573|gb|EFF88923.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces sp. e14]
Length = 248
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ I + SG+R+ N + A S H+ G A D +PGVS R+
Sbjct: 155 KLEALRKKLG-NVPITVNSGFRSIAHNAEV-----GGASDSMHLYGTAADLDVPGVSNRT 208
Query: 170 LYKIAIRLKRGGVGYYS-KFLHIDVGRV--RSW 199
+Y+ A G+ Y+ H+D R+W
Sbjct: 209 VYQKAETCGFSGLETYTADHQHVDSRADLGRAW 241
>gi|117924610|ref|YP_865227.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117926115|ref|YP_866732.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117608366|gb|ABK43821.1| Peptidase M15A [Magnetococcus sp. MC-1]
gi|117609871|gb|ABK45326.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 132
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+MDP+ + L +++ + P + S YR N +S+ H G AVD
Sbjct: 26 EMDPEFMERLEDLRGAYDKPMP--VTSAYRCPNHNASVSKTGPSGP----HTTGMAVDIQ 79
Query: 162 IPGVSLRSLYKIAIRLKRGGVGYYS------KFLHIDV 193
+ G L +A+ GVG +FLH+D
Sbjct: 80 VAGEDAHKLMTLALYHGFTGVGVRQRGPHQARFLHLDT 117
>gi|304392684|ref|ZP_07374624.1| peptidase M15A [Ahrensia sp. R2A130]
gi|303295314|gb|EFL89674.1| peptidase M15A [Ahrensia sp. R2A130]
Length = 139
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 17/101 (16%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L + + + + S +R+ N + A S H KAVDF + G
Sbjct: 48 KLKRVLRRVAHNYG---DVIVFSTWRSPWHNYRV-----GGASGSYHKKCKAVDFKVRGA 99
Query: 166 SLRSLYKIAIRLKRGGVG---YYS----KFLHIDVGRVRSW 199
++ +Y+ R + GVG Y +HID G R+W
Sbjct: 100 NMSEVYRYVKRQR--GVGGHKLYPASRGGHIHIDTGPRRTW 138
>gi|209547640|ref|YP_002279557.1| peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209533396|gb|ACI53331.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 142
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I SG R+ R S H A D +PG+
Sbjct: 57 RLQAVLSHIAAKTGRRP--MITSGLRS-------HPRRHG----SLHGKCLAADIRMPGL 103
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 104 SERTIIAAARSAPGIGGIGTYCNGIVHVDVGPQRRW 139
>gi|21229164|ref|NP_635086.1| hypothetical protein MM_3062 [Methanosarcina mazei Go1]
gi|20907727|gb|AAM32758.1| hypothetical protein MM_3062 [Methanosarcina mazei Go1]
Length = 351
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ P+L L I+ + + SGYR N+ + A +SQH+ G+A D
Sbjct: 71 ARISPELVAGLQRIRDRVGS--AVVLNSGYRHNVLNETV-----GGADESQHITGRAADI 123
Query: 161 YIPGVSLRSLYKIAIRLKRG---GVGYYSKFLHIDV-GRVRSW 199
S L +IA+ + G G+G +H+D+ G++ SW
Sbjct: 124 RASAKSPLDLARIALE-ELGCDIGIGLGRNSIHVDLRGQLTSW 165
>gi|117926191|ref|YP_866808.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117609947|gb|ABK45402.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 133
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD + L E++ + + I I S YR N +S H G+AVD +
Sbjct: 28 MDERFMARLEELRMAYG--KPIIITSAYRCPNHNASVSTTGSNGP----HTTGRAVDVQV 81
Query: 163 PGVSLRSLYKIAIRLKRGGVG------YYSKFLHIDV 193
G +L +A+ G+G + S+F+H+D
Sbjct: 82 SGEDAHTLMALAMHHGFTGIGVSQRGQHKSRFIHLDT 118
>gi|254412518|ref|ZP_05026292.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
gi|196180828|gb|EDX75818.1| Peptidase M15 family [Microcoleus chthonoplastes PCC 7420]
Length = 553
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 11/98 (11%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
++ + + S YR N+ + A+ S+H++G A+DF G+
Sbjct: 461 RIAKLAQRARDRIG--RPFIVTSWYRPPHINRAV-----GGAKYSRHLVGDAIDFVCEGL 513
Query: 166 SLRSLYKIAIRLKRGGVGYYSKF---LHIDVGRVR-SW 199
S +Y GG+G YS+F HID R W
Sbjct: 514 SGNQVYWSLEPWWPGGLGRYSRFPNLCHIDARSYRARW 551
>gi|310825691|ref|YP_003958048.1| muramoyl-pentapeptide carboxypeptidase [Eubacterium limosum
KIST612]
gi|308737425|gb|ADO35085.1| muramoyl-pentapeptide carboxypeptidase [Eubacterium limosum
KIST612]
Length = 244
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 11/95 (11%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+ M+ L + L +++ + + + SG R + N + S H LG+A D
Sbjct: 152 PVPMNRTLIEKLEQVRNDLGI--PLVVTSGVRCEILNAEV-----GGVPDSYHKLGRAAD 204
Query: 160 FYI---PGVSLRSLYKIAIRLKRGGVGYYS-KFLH 190
+ G ++ ++ R + YY F+H
Sbjct: 205 IAVYAANGYTVDAVADAGERYGLKTIRYYDRSFVH 239
>gi|146340793|ref|YP_001205841.1| hypothetical protein BRADO3852 [Bradyrhizobium sp. ORS278]
gi|146193599|emb|CAL77616.1| hypothetical protein BRADO3852 [Bradyrhizobium sp. ORS278]
Length = 122
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L ++++ V I ILS YR+ N+ + A S H+ A+DF S S
Sbjct: 1 MLDKLREELGV--PIRILSVYRSPLYNRCI----DGSAVNSFHMQFMAIDFSCDSGSPAS 54
Query: 170 LYKIAIRLKRGGV----GYYSKFLHIDV-GRVRSWT 200
+ R GV G YS F H+D G +WT
Sbjct: 55 WRPSSRSTGRAGVAAGIGGYSSFAHVDTRGDNINWT 90
>gi|310825721|ref|YP_003958078.1| putative muramoyl-pentapeptide carboxypeptidase [Eubacterium
limosum KIST612]
gi|308737455|gb|ADO35115.1| putative muramoyl-pentapeptide carboxypeptidase [Eubacterium
limosum KIST612]
Length = 173
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
M+ L + ++ + I SG R + N + S+H +G A D Y
Sbjct: 89 MEEALLAQVENLRNRLG--RPVIITSGVRCTQRNHEV-----GGIEYSKHKIGCAADLYC 141
Query: 163 PGVSLRSLYKIAIRLKRGGVGYYSK-FLHIDV 193
PGV + +A L G + Y + F+H++V
Sbjct: 142 PGVHYSEVAAVARELGLGVIEYPEQLFVHVEV 173
>gi|117924543|ref|YP_865160.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117608299|gb|ABK43754.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 130
Score = 65.6 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD + L E++ + + I + S YR N +S H G+AVD +
Sbjct: 25 MDERFMARLEELRMAYG--KPIIVNSAYRCPNHNASVSTTGSNGP----HTTGRAVDVQV 78
Query: 163 PGVSLRSLYKIAIRLKRGGVG------YYSKFLHIDV 193
G +L +A+ G+G + S+F+H+D
Sbjct: 79 SGEDAHALMALAMHHGFTGIGVSQRGQHKSRFIHLDT 115
>gi|117926044|ref|YP_866661.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117609800|gb|ABK45255.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 130
Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD + L E++ + + I + S YR N +S H G+AVD +
Sbjct: 25 MDERFMARLEELRMAYG--KPIIVNSAYRCPNHNASVSTTGSNGP----HTTGRAVDVQV 78
Query: 163 PGVSLRSLYKIAIRLKRGGVG------YYSKFLHIDV 193
G +L +A+ G+G + S+F+H+D
Sbjct: 79 SGEDAHTLMALAMHHGFTGIGVSQRGQHKSRFIHLDT 115
>gi|260654781|ref|ZP_05860269.1| glycoside hydrolase, family 24 [Jonquetella anthropi E3_33 E1]
gi|260630496|gb|EEX48690.1| glycoside hydrolase, family 24 [Jonquetella anthropi E3_33 E1]
Length = 132
Score = 65.2 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D L + ++ E + + S R + N + + S+H+ G+A+DF++
Sbjct: 26 DEALPELAEAVRDIL--KEPMIVHSVCRCRAHNAAV-----GGSPTSKHLKGQAMDFHVR 78
Query: 164 GVSLRSLYKI-------AIRLKRGGVGYYSKFLHIDV-----GRVRSW 199
G+S ++Y + GG+G Y +HIDV G +R W
Sbjct: 79 GLSPLAVYNAIVKAWHDGRLPELGGIGLYDWGVHIDVHHAQDGHLRKW 126
>gi|327188580|gb|EGE55790.1| hypothetical protein RHECNPAF_850023 [Rhizobium etli CNPAF512]
Length = 175
Score = 64.8 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I I SG R R S H A DF +PG+
Sbjct: 90 RLQAILSHIAAKTG-RRPI-ITSGLRP-------HPRRHG----SLHGKCLAADFRMPGL 136
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 137 SERTIIAAARSAPGIGGIGSYCNGIIHVDVGPQRRW 172
>gi|190890055|ref|YP_001976597.1| hypothetical protein RHECIAT_CH0000425 [Rhizobium etli CIAT 652]
gi|190695334|gb|ACE89419.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 142
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I I SG R +R S H A DF +PG+
Sbjct: 57 RLQAILSHIAAKTG-RRPI-ITSGLRP--------HPSR---HGSLHGKCLAADFRMPGL 103
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 104 SERTIIAAARSAPGIGGIGSYCNGIIHVDVGPQRRW 139
>gi|304392682|ref|ZP_07374622.1| putative side tail fiber protein [Ahrensia sp. R2A130]
gi|303295312|gb|EFL89672.1| putative side tail fiber protein [Ahrensia sp. R2A130]
Length = 246
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L ++ Q + + + S R++ N+M+ + ++S H+ +AVDF + G
Sbjct: 160 RLKRVLDQVSQKYGR---VIVNSTNRSRSRNRMVGGK-----KRSYHIGCRAVDFRVAGS 211
Query: 166 SLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
+ + GG Y + F HID G R+W
Sbjct: 212 NKGLSRFLRNHPSVGGFKRYAAGFYHIDTGPRRTW 246
>gi|254500746|ref|ZP_05112897.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436817|gb|EEE43496.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 129
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L ++ + + + + S R + A+ S H+ +AVDF + G
Sbjct: 43 KLKKVLNKVAKRYG---PVKVNSTKR-----WWFENWRKGGAKNSYHLNCQAVDFSVGGN 94
Query: 166 SLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
L + + GG YY S F HID G R+W
Sbjct: 95 PSSVLAFLKSQSAVGGYKYYSSGFYHIDTGPRRTW 129
>gi|218459434|ref|ZP_03499525.1| hypothetical protein RetlK5_08052 [Rhizobium etli Kim 5]
gi|218660774|ref|ZP_03516704.1| hypothetical protein RetlI_14937 [Rhizobium etli IE4771]
Length = 142
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I SG+R R S H A DF +PG+
Sbjct: 57 RLRAILSHIAAKTGRRP--VITSGHRP-------HPRRHG----SLHGKCLAADFRMPGL 103
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 104 SERTIIAAAKSAPGIGGIGSYCNGIIHVDVGPQRRW 139
>gi|282855883|ref|ZP_06265182.1| gp46 [Pyramidobacter piscolens W5455]
gi|282586284|gb|EFB91553.1| gp46 [Pyramidobacter piscolens W5455]
Length = 131
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+L +++ E + + S R ++ N + + +S+HV G+A+DF
Sbjct: 28 PRLLALAEKVRDLLG--EPMIVTSVCRCRDHNAKV-----GGSPRSKHVNGRAMDFKTRS 80
Query: 165 VSLRSLYKIAIRL-------KRGGVGYYSKFLHIDV-----GRVRSW 199
+++Y +R + GGVG Y +HID G +R W
Sbjct: 81 -DPQAVYDAIVRTWENGELSELGGVGIYDWGIHIDTEKAPDGHLRRW 126
>gi|218516518|ref|ZP_03513358.1| hypothetical protein Retl8_24201 [Rhizobium etli 8C-3]
Length = 137
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I I SG R +R S H A DF +PG+
Sbjct: 52 RLQAILSHIAAKTG-RRPI-ITSGLRP--------HPSR---HGSLHGKCLAADFRMPGL 98
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 99 SERTIIAAARSAPGIGGIGSYCNGIIHVDVGPQRRW 134
>gi|239944169|ref|ZP_04696106.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
roseosporus NRRL 15998]
gi|239990625|ref|ZP_04711289.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
roseosporus NRRL 11379]
Length = 223
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L ++ + I + SG+R+ N + A S+H+ G AVD SL
Sbjct: 126 MWKLEALRHALG-DKSIRVTSGFRSASCNAAV-----GGASNSRHMYGDAVDLGASPHSL 179
Query: 168 RSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
+L K A G+ GY ++ +H++ G R W+
Sbjct: 180 CTLAKQARYHGFRGILGPGYVGHNDHVHVNQGPSRFWS 217
>gi|218507474|ref|ZP_03505352.1| hypothetical protein RetlB5_07590 [Rhizobium etli Brasil 5]
Length = 95
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I I SG R +R S H A DF +PG+
Sbjct: 10 RLQAILSHIAAKTG-RRPI-ITSGLRP--------HPSR---HGSLHGKCLAADFRMPGL 56
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 57 SERTIIAAARSAPGIGGIGSYCNGIIHVDVGPQRRW 92
>gi|134297343|ref|YP_001121078.1| peptidase M15A [Burkholderia vietnamiensis G4]
gi|134140500|gb|ABO56243.1| Peptidase M15A [Burkholderia vietnamiensis G4]
Length = 149
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L ++ + + I SGYR+ N+ + + S H+ G+A D +PG++
Sbjct: 42 VLQPLRVHL--KRPVVITSGYRSPALNRAI-----GGSPTSHHMQGRAADLIVPGMTPLL 94
Query: 170 LYKIAIRLK 178
+ + A +LK
Sbjct: 95 VCQAAHQLK 103
>gi|182436095|ref|YP_001823814.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464611|dbj|BAG19131.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 245
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 16/110 (14%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+ M L ++ I + SG+R+ N + A S+H+ G
Sbjct: 141 RANALSSM-----WKLEALRHALG-DRSIRVTSGFRSASCNAAV-----GGASNSRHMYG 189
Query: 156 KAVDFYIPGVSLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
AVD SL +L K A G+ GY ++ +H++ G R W+
Sbjct: 190 DAVDLGASPHSLCTLAKQARYHGFRGILGPGYVGHNDHVHVNQGPSRFWS 239
>gi|327198556|ref|YP_004327143.1| carboxypeptidase [Pseudoalteromonas phage H105/1]
gi|304367951|gb|ADM26710.1| carboxypeptidase [Pseudoalteromonas phage H105/1]
Length = 113
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
M + + L +++ Y + SGYR+ + + H G A D
Sbjct: 18 KMSKEFLNKLDDLRHYCGFS--FVVNSGYRSTSHSAEKHKSKGGT-----HTQGIAADIR 70
Query: 162 IP-GVSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
+ GV + AI L G+G F+H+D+
Sbjct: 71 VSNGVQRIEIVSKAIELGFTGIGVAKGFVHVDI 103
>gi|291447641|ref|ZP_06587031.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces roseosporus
NRRL 15998]
gi|291350588|gb|EFE77492.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces roseosporus
NRRL 15998]
Length = 245
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L ++ + I + SG+R+ N + A S+H+ G AVD SL
Sbjct: 148 MWKLEALRHALG-DKSIRVTSGFRSASCNAAV-----GGASNSRHMYGDAVDLGASPHSL 201
Query: 168 RSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
+L K A G+ GY ++ +H++ G R W+
Sbjct: 202 CTLAKQARYHGFRGILGPGYVGHNDHVHVNQGPSRFWS 239
>gi|268608834|ref|ZP_06142561.1| Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Ruminococcus
flavefaciens FD-1]
Length = 398
Score = 62.5 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 20/108 (18%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
++P+L L ++ + + I + SGYR + ++ + + QH +G A D
Sbjct: 32 INPELIADLEKLYNSLNCSK-IVVTSGYRCEAHDRSVGGTGKG-----QHTVGNAADICC 85
Query: 163 PG-----VSLRSLYKIAIRLKRGGVG------YYSKFLHIDVGRVRSW 199
G +S + + A + GG+ Y+ H+DV + W
Sbjct: 86 YGRDGQPISSKKVCCNAQDIGFGGIANITDEYIYT---HVDVRNEKKW 130
>gi|325678445|ref|ZP_08158065.1| peptidase M15 [Ruminococcus albus 8]
gi|324109946|gb|EGC04142.1| peptidase M15 [Ruminococcus albus 8]
Length = 334
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
++ +DP L D L + + + I + SGYR + + +
Sbjct: 203 FACKRCGKTHAIDPNLIDKLEALYSKLNCSK-IIVNSGYRDPDCSVAVGGYRTDA----- 256
Query: 152 HVLGKAVDFYIPG-----VSLRSLYKIAIRLKRGGVGYYS-KFLHIDV 193
H LG A D + + A ++ G+G + +H+DV
Sbjct: 257 HTLGLAADVVCYDKNGNVIPCETTAWAAEQIGFTGIGLMNGGAIHLDV 304
>gi|326776721|ref|ZP_08235986.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
XylebKG-1]
gi|326657054|gb|EGE41900.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
XylebKG-1]
Length = 232
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L ++ I + SG+R+ N + A S+H+ G AVD SL
Sbjct: 135 MWKLEALRHALG-DRSIRVTSGFRSASCNAAV-----GGASNSRHMYGDAVDLGASPHSL 188
Query: 168 RSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
+L K A G+ GY ++ +H++ G R W+
Sbjct: 189 CTLAKQARHHGFRGILGPGYVGHNDHVHVNQGPSRFWS 226
>gi|315502176|ref|YP_004081063.1| peptidase m15a [Micromonospora sp. L5]
gi|315408795|gb|ADU06912.1| Peptidase M15A [Micromonospora sp. L5]
Length = 259
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L +++ + +Y+ SG+R+ N+ + A SQH+ G A D
Sbjct: 150 RTMWKLEALRRSLG-DKPLYVTSGFRSIACNRQV-----GGAADSQHLYGNAADLIAKHR 203
Query: 166 SLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGR---------VRSWT 200
SL + + A G+ GY + H+D R R W+
Sbjct: 204 SLCDIARSARDQGFSGIYGPGYPDHDDHTHVDSRRENNRDKVPNTRDWS 252
>gi|241202794|ref|YP_002973890.1| peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240856684|gb|ACS54351.1| Peptidase M15A [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 142
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I SG+R R S H A DF +PG+
Sbjct: 57 RLRAVLSHIAAKTGRRP--VITSGHRP-------HPRRHG----SLHGKCLAADFRMPGL 103
Query: 166 SLRSLYKIAIR-LKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 104 SERTIIAAARSAPGIGGIGSYCNGIIHVDVGPQRRW 139
>gi|302865629|ref|YP_003834266.1| peptidase M15A [Micromonospora aurantiaca ATCC 27029]
gi|302568488|gb|ADL44690.1| Peptidase M15A [Micromonospora aurantiaca ATCC 27029]
Length = 259
Score = 61.7 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L +++ + +Y+ SG+R+ N+ + A SQH+ G A D
Sbjct: 150 RTMWKLEALRRSLG-DKPLYVTSGFRSIACNRQV-----GGAADSQHLYGNAADLIAKHR 203
Query: 166 SLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGR---------VRSWT 200
SL + + A G+ GY + H+D R R W+
Sbjct: 204 SLCDIARSARDQGFSGIYGPGYPDHDDHTHVDSRRENNRDKVANTRDWS 252
>gi|86356042|ref|YP_467934.1| hypothetical protein RHE_CH00385 [Rhizobium etli CFN 42]
gi|86280144|gb|ABC89207.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 142
Score = 61.4 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I I + SG R R S H A D +PG+
Sbjct: 57 RLRAILSHIAAKTG-RRPI-VTSGLRP-------HPRRHG----SLHGKCLAADIRVPGL 103
Query: 166 SLRSLYKIAI-RLKRGGVGYY-SKFLHIDVGRVRSW 199
S R++ A GG+G Y + +H+DVG R W
Sbjct: 104 SERTIIAAARTAPGIGGIGSYCNGIIHVDVGPQRRW 139
>gi|134298418|ref|YP_001111914.1| hypothetical protein Dred_0545 [Desulfotomaculum reducens MI-1]
gi|134051118|gb|ABO49089.1| hypothetical protein Dred_0545 [Desulfotomaculum reducens MI-1]
Length = 66
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK--FLHIDV 193
+A S H+ G A D +PG+ + L ++A + G+G Y F+H+D+
Sbjct: 2 GGVA-DSYHIKGMAADIRVPGLVVAELGRLAEQAGFEGIGTYPTQVFVHVDI 52
>gi|330466015|ref|YP_004403758.1| peptidase M15A [Verrucosispora maris AB-18-032]
gi|328808986|gb|AEB43158.1| peptidase M15A [Verrucosispora maris AB-18-032]
Length = 262
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L +++ + + + SG+R+ N + A SQH+ G A D
Sbjct: 149 RTMWKLEALRKSLG-DKPLIVTSGFRSSTCNSQV-----GGASNSQHLYGNAADLISRDR 202
Query: 166 SLRSLYKIAIRLKRG-------GVGYYSKFLHIDVGR 195
SL + + A G GV ++ +H+D R
Sbjct: 203 SLCDVARAAR--NHGFSGIIGPGVSGHNTHVHVDSRR 237
>gi|260063394|ref|YP_003196474.1| hypothetical protein RB2501_01256 [Robiginitalea biformata
HTCC2501]
gi|88783489|gb|EAR14661.1| hypothetical protein RB2501_01256 [Robiginitalea biformata
HTCC2501]
Length = 117
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
MD L + ++ + I SGYRT + N + S H G A D
Sbjct: 20 KMDLGFLKMLDKAREVADI--PFVITSGYRTPQYNDRV-----GGVDGSAHTRGFAADIA 72
Query: 162 IPGVSLRSLYKIAIRLKRGG---VGYYSKFLHID 192
S+ Y I L+ G +G S F+H+D
Sbjct: 73 CRD-SVSR-YNIIKSLQVAGFTRIGIASTFIHVD 104
>gi|170720813|ref|YP_001748501.1| peptidase M15A [Pseudomonas putida W619]
gi|169758816|gb|ACA72132.1| Peptidase M15A [Pseudomonas putida W619]
Length = 143
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L D L +++ F + + I SGYR+ NK + + +SQH+ G A DF I G+S
Sbjct: 38 LCDALEQVRALFGL--PVIISSGYRSPALNKRI-----GGSPRSQHLRGLAADFEIFGIS 90
Query: 167 LRSL 170
R +
Sbjct: 91 NREV 94
>gi|172038836|ref|YP_001805337.1| hypothetical protein cce_3923 [Cyanothece sp. ATCC 51142]
gi|171700290|gb|ACB53271.1| hypothetical protein cce_3923 [Cyanothece sp. ATCC 51142]
Length = 405
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-IPGV 165
L L ++++ + I + S YR N+ + A +SQH+LGKA D + G
Sbjct: 313 LAQELDKVREAWGS--PIIVTSWYRPPAINRAI-----GGATRSQHILGKAADIRPVQG- 364
Query: 166 SLRS----LYKIAIRLKRGGVGYYSKFLHIDV--GRVRSWT 200
+L L K+A + K G G F+H+D+ G++R W
Sbjct: 365 NLYQFQDWLDKVAWKDKALGYGAKKGFVHVDLRPGKIR-WN 404
>gi|307943316|ref|ZP_07658660.1| putative lipoprotein [Roseibium sp. TrichSKD4]
gi|307772946|gb|EFO32163.1| putative lipoprotein [Roseibium sp. TrichSKD4]
Length = 138
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
+ A S H+ +AVDF + + + + + GG YY S F HID G R+W
Sbjct: 82 KGGASDSYHLNCQAVDFSVKANPSSVIAFLKAQKEVGGYKYYSSGFYHIDTGPRRTW 138
>gi|332141801|ref|YP_004427539.1| hypothetical protein MADE_1012025 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551823|gb|AEA98541.1| hypothetical protein MADE_1012025 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 354
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 41/131 (31%)
Query: 105 PQLFDFLWEIQQYFSVPE----YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
P L L +++ ++ + I+SGYRT + NK + + S+HV G A D
Sbjct: 226 PSLLLKLEMLRREMNMNSINVSNMVIMSGYRTPQYNKAI-----GNVKFSRHVYGDAADI 280
Query: 161 YIPG--------------VSLRS---LYKIAIRLKR--------GGVGYY------SKFL 189
++ VS++ + ++ L + GG+G Y F+
Sbjct: 281 FVDNDGNYRMDDLNKDGAVSIKDADVMARMIAELNKRSEYKGLIGGLGVYGPKPHRGPFI 340
Query: 190 HIDV-GRVRSW 199
H+D G W
Sbjct: 341 HVDTRGIKARW 351
>gi|163756736|ref|ZP_02163847.1| Peptidase M15A [Kordia algicida OT-1]
gi|161323411|gb|EDP94749.1| Peptidase M15A [Kordia algicida OT-1]
Length = 173
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV--LGKAVD 159
MD +L L +++ P + +I SG R++ N+ + A +S H AVD
Sbjct: 60 CMDRRLLMMLEQLEMRTGYPIFDWINSGARSEAHNRKV-----GGASRSSHKIPTCMAVD 114
Query: 160 FYIPGVSLRS--LYKIA-IRLKRGGVGYYSKFLHIDV 193
+P +R+ +Y+ I KR GVG F+H+D
Sbjct: 115 IGVPSTDIRNQLVYEARNIGFKRIGVGR--TFVHLDT 149
>gi|163756671|ref|ZP_02163782.1| Peptidase M15A [Kordia algicida OT-1]
gi|161323346|gb|EDP94684.1| Peptidase M15A [Kordia algicida OT-1]
Length = 173
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV--LGKAVD 159
MD +L L +++ P + +I SG R++ N+ + A +S H AVD
Sbjct: 60 CMDRRLLMMLEQLEMRTGYPIFDWINSGARSEAHNRKV-----GGASRSSHKIPTCMAVD 114
Query: 160 FYIPGVSLRS--LYKIA-IRLKRGGVGYYSKFLHIDV 193
+P +R+ +Y+ I KR GVG F+H+D
Sbjct: 115 IGVPSTDIRNQLVYEARNIGFKRIGVGR--TFVHLDT 149
>gi|167762496|ref|ZP_02434623.1| hypothetical protein BACSTE_00851 [Bacteroides stercoris ATCC
43183]
gi|167699602|gb|EDS16181.1| hypothetical protein BACSTE_00851 [Bacteroides stercoris ATCC
43183]
Length = 132
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
NR D + + +D + L +++++ + I + SGYR NK + A
Sbjct: 22 NRCGSDIEANLTALVD----NVLDPLREWYG--KPIVVNSGYRCPALNKAV-----GGAT 70
Query: 149 KSQHVLGKAVDFYIPGVSLRSL 170
SQH+ G+A D L
Sbjct: 71 TSQHMSGQAADIDTGDRQQNKL 92
>gi|237745787|ref|ZP_04576267.1| peptidase M15A [Oxalobacter formigenes HOxBLS]
gi|229377138|gb|EEO27229.1| peptidase M15A [Oxalobacter formigenes HOxBLS]
Length = 151
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L + L +++ F + ++I SGYR NK + R S H+ G A D I G+
Sbjct: 56 KLAETLEQVRTLFGL--PVHINSGYRCPALNKAV-----GGVRNSAHLAGLAADIRIDGI 108
Query: 166 SLRSL 170
+ +
Sbjct: 109 APHDV 113
>gi|284034144|ref|YP_003384075.1| Zinc D-Ala-D-Ala carboxypeptidase [Kribbella flavida DSM 17836]
gi|283813437|gb|ADB35276.1| Zinc D-Ala-D-Ala carboxypeptidase [Kribbella flavida DSM 17836]
Length = 255
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
Q L ++ + + + SG+R+ N + A SQH+ G++ D GV
Sbjct: 157 QTMWQLEALRHALG-DQPLTVTSGFRSYSCNS-----SVGGASNSQHLYGRSADLV--GV 208
Query: 166 -SLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
SL +L K A GG+ GY ++ H+D+ SW
Sbjct: 209 HSLCTLAKQARYHGFGGIFGPGYAGHNDHTHLDIRTSNSWA 249
>gi|304320161|ref|YP_003853804.1| hypothetical protein PB2503_02932 [Parvularcula bermudensis
HTCC2503]
gi|303299064|gb|ADM08663.1| hypothetical protein PB2503_02932 [Parvularcula bermudensis
HTCC2503]
Length = 290
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 37/126 (29%)
Query: 106 QLFDFLWEIQQY-FSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-- 162
+L L +Q+ + E ++SG+RT N + AR S+H+ G A D YI
Sbjct: 168 RLETLLTALQEDGLTDTESFVVMSGFRTPFYNTAI-----GSARLSRHMYGDASDIYIDV 222
Query: 163 ---PGV-------------SLRSLYKIAIRL------KRGGVGYY------SKFLHID-V 193
GV LY A L GG+G Y F+HID
Sbjct: 223 APADGVMDDLNRDGQLTKADANFLYDYAADLFANSNVDAGGIGAYGTNAVHGPFVHIDGR 282
Query: 194 GRVRSW 199
GR W
Sbjct: 283 GRPARW 288
>gi|269793180|ref|YP_003318084.1| Peptidase M15A [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100815|gb|ACZ19802.1| Peptidase M15A [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 102
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+DP + L ++ + I S YR + N + + +S H+ G+A D
Sbjct: 14 VARVDPGALEALKALEARVGR---LSITSAYRCRSHNAKV-----GGSPRSLHMAGRAFD 65
Query: 160 FYIPGVSLRSLYKIAIRLKRGGVGYYS--KFLHI 191
P +L +A + + Y F+H+
Sbjct: 66 VACPSWRQDALVTMARQAGFTEIIKYPRRGFVHL 99
>gi|282866653|ref|ZP_06275695.1| Peptidase M15A [Streptomyces sp. ACTE]
gi|282558555|gb|EFB64115.1| Peptidase M15A [Streptomyces sp. ACTE]
Length = 245
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L ++ + I + SG+R+ N + A S+H+ G AVD SL
Sbjct: 148 MWKLEALRHALG-DQPIRVTSGFRSTPCNA-----SVGGAANSRHLYGDAVDLGAGPHSL 201
Query: 168 RSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
++ K A G+ GY +S +H++ G W+
Sbjct: 202 CTIAKQARNHGFNGILGPGYPGHSDHIHVNQGPSHFWS 239
>gi|16273552|ref|NP_439807.1| hypothetical protein HI1665 [Haemophilus influenzae Rd KW20]
gi|1176065|sp|P44283|Y1665_HAEIN RecName: Full=Uncharacterized protein HI_1665
gi|1574516|gb|AAC23313.1| predicted coding region HI1665 [Haemophilus influenzae Rd KW20]
Length = 40
Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 165 VSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ L + A L+ GGVGYY S F+H+D G VR+W
Sbjct: 1 MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTW 37
>gi|323344077|ref|ZP_08084303.1| peptidase M15 superfamily protein [Prevotella oralis ATCC 33269]
gi|323094806|gb|EFZ37381.1| peptidase M15 superfamily protein [Prevotella oralis ATCC 33269]
Length = 140
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
+ L ++++F I+I SGYR+ N + SQH+ G+A D +P S
Sbjct: 40 EVLEPLRKHFG---PIHINSGYRSPRLNMKI-----GGVGNSQHMRGEAADIRLPDSST 90
>gi|256839995|ref|ZP_05545504.1| peptidase M15A [Parabacteroides sp. D13]
gi|256738925|gb|EEU52250.1| peptidase M15A [Parabacteroides sp. D13]
Length = 158
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
L ++ Y E I I SGYRT E N+++ SQH+ G+A D I G ++
Sbjct: 67 LQPLRDYL--NEPITINSGYRTAELNRLVKG-----VYGSQHIKGEAADIRISG---DAM 116
Query: 171 YKIAIRLKRGGVGY-----YS--KFLHI 191
++ LK G+ Y Y+ F+H+
Sbjct: 117 RVVSAVLKS-GIPYDQCIFYTRRNFVHV 143
>gi|331028030|ref|YP_004421745.1| lysozyme [Synechococcus phage S-CBS3]
gi|294805643|gb|ADF42481.1| lysozyme [Synechococcus phage S-CBS3]
Length = 359
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 88 LNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
L++ + ++ +D+ +L FL ++ F + I I SGYR N + A
Sbjct: 244 LDQEARRFDNQGQVDIAAELAAFLERVRTQFGG-KPIIITSGYRPPAVNA-----SVGGA 297
Query: 148 RKSQHVL---GKAVDFYIPGVSLRSLYKIAIR--LKRGGVGYYSKFLHIDV--GRVR-SW 199
S+H+ AVDFYI + ++ + + G G F+H+ + GR R W
Sbjct: 298 SSSEHLYRPGCGAVDFYINSADINAVQRWCDQNWPYSLGYGAPKGFVHLGIRQGRPRVRW 357
>gi|297192181|ref|ZP_06909579.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720174|gb|EDY64082.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces
pristinaespiralis ATCC 25486]
Length = 245
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L ++ + I + SG+R+ N + A S+H+ G A D
Sbjct: 146 RTMWKLEALRHALG-DQPITVTSGFRSYSCNSAV-----GGASSSRHLYGDAADLGAGPH 199
Query: 166 SLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
SL L + A G+ GY ++ H+D R W+
Sbjct: 200 SLCKLAQQARNHGFNGILGPGYPGHNDHTHVDHRGSRYWS 239
>gi|238063101|ref|ZP_04607810.1| Muramoyl-pentapeptide carboxypeptidase [Micromonospora sp. ATCC
39149]
gi|237884912|gb|EEP73740.1| Muramoyl-pentapeptide carboxypeptidase [Micromonospora sp. ATCC
39149]
Length = 242
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP-G 164
+ L +++ E + + SG+R++ N+ + A SQH+ G A D P G
Sbjct: 128 RAMWKLEALRRGLG-DEPLRVTSGFRSEVCNRQVRG-----ASNSQHLYGNAADLAAPSG 181
Query: 165 VSLRSLYKIAIRLKRGGVGYYSK-------FLHIDVGR 195
SL + A G G Y +H+D R
Sbjct: 182 SSLCDVALHARD--HGFSGIYGPGYPDHEDHVHVDSRR 217
>gi|317485639|ref|ZP_07944514.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316923119|gb|EFV44330.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
Length = 105
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
MD L L E + + S YR + NK + S H G AVD
Sbjct: 3 KMDADLLHLLDEARDLAGT--PFSLTSAYRCPKHNKAV-----GGVPTSAHTRGYAVDIR 55
Query: 162 -IPGVSLRSLYKIAIRLKRGGVGYYSKFLHID 192
+ S + + + + + ++H+D
Sbjct: 56 CVDSHSRFVILQALLEVGFRRIELAPTWIHVD 87
>gi|238027342|ref|YP_002911573.1| hypothetical protein bglu_1g17320 [Burkholderia glumae BGR1]
gi|237876536|gb|ACR28869.1| Hypothetical protein bglu_1g17320 [Burkholderia glumae BGR1]
Length = 149
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 20/95 (21%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP-- 163
+L L + + + + I SGYR+ N+ + +A S H+ G A DF P
Sbjct: 37 RLAQTLEQARVLLGG-KPMQITSGYRSPALNRAV----GGVAS-SAHLAGLAADFVCPKF 90
Query: 164 GVSLRSLYKIAIR-------LKRGGVGYYSKFLHI 191
G L + K+A + GG +++HI
Sbjct: 91 GAPLDVVRKLAASNLAFDQLIHEGG-----RWVHI 120
>gi|226227861|ref|YP_002761967.1| hypothetical protein GAU_2455 [Gemmatimonas aurantiaca T-27]
gi|226091052|dbj|BAH39497.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 337
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 42/149 (28%)
Query: 92 LYDWHSKQSIDMDPQ-------LFDFLWEIQQYFSV----PEYIYILSGYRTQETNKMLS 140
L D+ + + P+ L D L + + + ++SG+RT + N+
Sbjct: 187 LRDFLTHDQATVWPKYLVLQETLVDKLELVLSELRAMGIPAQKMRVMSGFRTPQYNEQGV 246
Query: 141 RRNRKIARKSQHVLGKAVDF-----------------YIPGVSLRSLYKIAIRLK----- 178
++ + S+H G A D + R L K A R++
Sbjct: 247 GAGGRV-QDSRHQYGDAADVYVVNGTRDWMSDLNGDGRVDIRDARVLAKAAERVEQAHPE 305
Query: 179 -RGGVGYY------SKFLHIDV-GRVRSW 199
GG+G Y F+HIDV G+ W
Sbjct: 306 LAGGIGVYMANSVHGPFVHIDVRGQRARW 334
>gi|213027799|ref|ZP_03342246.1| hypothetical protein Salmonelentericaenterica_37880 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 41
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 59 LKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
+ + + TG F G Y Q+ L++LN
Sbjct: 1 MTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFR 35
>gi|254884545|ref|ZP_05257255.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254837338|gb|EET17647.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 132
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 96 HSKQSIDMDPQLFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+ + L D L ++ ++ + I + SGYR E N + ++ SQH+
Sbjct: 25 RQEHVTAL-TALVDNVLDPLRTWWG--KPITVNSGYRCPELNAAVRG-----SKTSQHMK 76
Query: 155 GKAVDFYIPGVSLRSL 170
G+A D L
Sbjct: 77 GEAADIDTGDRQQNKL 92
>gi|282897358|ref|ZP_06305360.1| conserved hypothetical protein [Raphidiopsis brookii D9]
gi|281198010|gb|EFA72904.1| conserved hypothetical protein [Raphidiopsis brookii D9]
Length = 258
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD-FYIPGVSLRSLYK 172
+++ F I I SGYR N + AR SQH+ +A+D + G + L++
Sbjct: 170 VREKFGS--PIRITSGYRPPAVNS-----SVGGARNSQHLYFRAIDMIPMNG-DFKKLWE 221
Query: 173 IAIRLKRGG------VGYYSKFLHIDVGR 195
I G +G F H DV
Sbjct: 222 ILKSSNFSGLGDAVFMGKNKGFFHADVRP 250
>gi|254885209|ref|ZP_05257919.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254838002|gb|EET18311.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 132
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 96 HSKQSIDMDPQLFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+ + L D L ++ ++ + I + SGYR E N + ++ SQH+
Sbjct: 25 RQEHVTAL-TALVDNVLDPLRTWWG--KPITVNSGYRCPELNAAVRG-----SKTSQHMK 76
Query: 155 GKAVDFYIPGVSLRSL 170
G+A D L
Sbjct: 77 GEAADIDTGDRQQNKL 92
>gi|206900956|ref|YP_002250245.1| gp46 [Dictyoglomus thermophilum H-6-12]
gi|206740059|gb|ACI19117.1| gp46 [Dictyoglomus thermophilum H-6-12]
Length = 110
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D L ++++ I I SGYR ++ N + S+H+ G A D P L
Sbjct: 31 DLLEKLERLILSGVKIKITSGYRCEKHNTEV-----GGVPNSKHMKGMACDITSP--ELE 83
Query: 169 SLYKIAIRLKRGGV--GYYSKFLHIDV 193
Y+I +L V K++H++V
Sbjct: 84 KAYEIVQKLGFSYVKIDKLKKYIHMEV 110
>gi|320008650|gb|ADW03500.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces flavogriseus ATCC
33331]
Length = 245
Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L ++ + I + SG+R+ N + A S+H+ G AVD SL
Sbjct: 148 MWKLEALRHALG-DQSIRVTSGFRSTSCNAAV-----GGATNSRHLYGDAVDLGSGPHSL 201
Query: 168 RSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
++ K A G+ GY +S +H++ G W+
Sbjct: 202 CTIAKQARNHGFNGILGPGYAGHSDHIHVNQGPNHFWS 239
>gi|282901413|ref|ZP_06309338.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
CS-505]
gi|281193692|gb|EFA68664.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
CS-505]
Length = 258
Score = 57.5 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD-FYIPGVSLRSLYK 172
+++ F I I SGYR N + AR SQH+ +A+D + G + L++
Sbjct: 170 VREKFGS--PIRITSGYRPPAVNS-----SVGGARNSQHLYFRAIDMIPMNG-DFKKLWE 221
Query: 173 IAIRLKRGG------VGYYSKFLHIDVGR 195
+ G +G F H DV
Sbjct: 222 VLKSSNFSGLGDAVFMGKNKGFFHADVRP 250
>gi|282881397|ref|ZP_06290075.1| peptidase M15 [Prevotella timonensis CRIS 5C-B1]
gi|281304746|gb|EFA96828.1| peptidase M15 [Prevotella timonensis CRIS 5C-B1]
Length = 144
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+ L +++ F I+I SGYR N++L SQH+ G+A D +
Sbjct: 44 EVLEPLRKEFG---PIFINSGYRCPLLNQLLHGVG-----NSQHMYGQAADIRLKS 91
>gi|90022534|ref|YP_528361.1| hypothetical protein Sde_2892 [Saccharophagus degradans 2-40]
gi|89952134|gb|ABD82149.1| Peptidase M15A [Saccharophagus degradans 2-40]
Length = 312
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 43/132 (32%)
Query: 106 QLFDFLWEIQQYFSVP----EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L L I + + E I+SGYRT N + + + S+H G A D +
Sbjct: 186 RLLRKLEYITEAVNREGIAMESFTIMSGYRTPFYNAAIKNK-----KYSRHQWGGAADIF 240
Query: 162 I-----PGV-------------SLRSLYKIAIRLKR---------GGVGYYS------KF 188
+ GV L+ + + R GG+G Y F
Sbjct: 241 VDENPKDGVMDDLNKDGKVNVDDATFLWDMVEKFYREAPDYKHLIGGLGLYQANAAHGPF 300
Query: 189 LHIDV-GRVRSW 199
+H+DV G W
Sbjct: 301 VHVDVRGYRARW 312
>gi|332707403|ref|ZP_08427453.1| hypothetical protein LYNGBM3L_37490 [Lyngbya majuscula 3L]
gi|332353894|gb|EGJ33384.1| hypothetical protein LYNGBM3L_37490 [Lyngbya majuscula 3L]
Length = 98
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
+ E+++YF I + S YR TN+ + A +S+H+ G AVDF + G+S S
Sbjct: 8 KVSEVREYFG-NRPILVNSWYRDPVTNRQV-----GGALRSRHLSGDAVDFVVEGISPMS 61
Query: 170 LYKIAIRL--KRGGVGYYSKFLHIDV-GRVRSWT 200
+ + RGG+ S F HID G W+
Sbjct: 62 VNRRLDSWWGSRGGLASASCFTHIDARGYRARWS 95
>gi|328542398|ref|YP_004302507.1| hypothetical protein SL003B_0778 [polymorphum gilvum SL003B-26A1]
gi|326412145|gb|ADZ69208.1| hypothetical protein SL003B_0778 [Polymorphum gilvum SL003B-26A1]
Length = 138
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
+ A S H+ KAVDF + G L + + + GG Y S HID G R+W
Sbjct: 82 KGGASNSYHLNCKAVDFSVRGDPNAVLAFLKAQPEVGGYKRYASGHYHIDTGPRRTW 138
>gi|288928600|ref|ZP_06422446.1| peptidase M15 superfamily [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329584|gb|EFC68169.1| peptidase M15 superfamily [Prevotella sp. oral taxon 317 str.
F0108]
Length = 127
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 106 QLF--DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+L + L +++ F V I I SGYR +E N M+ + SQH+LG+A D ++
Sbjct: 24 RLLCENVLEPLRRRFGV---IRITSGYRCEELNNMVGGK-----PNSQHLLGQAADIHLS 75
>gi|317056096|ref|YP_004104563.1| peptidase M15A [Ruminococcus albus 7]
gi|18481731|gb|AAL73547.1|AF469209_1 bacteriocin [Ruminococcus albus 7]
gi|315448365|gb|ADU21929.1| Peptidase M15A [Ruminococcus albus 7]
Length = 339
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 12/102 (11%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ +D L + L ++ + + I + SGYR + + H G A
Sbjct: 209 GNTHTIDQNLINKLEQLYTKLNCSK-IIVNSGYRDPNCSVAVGGGYDDA-----HTRGLA 262
Query: 158 VDFYIPG-----VSLRSLYKIAIRLKRGGVG-YYSKFLHIDV 193
D + ++ A ++ G+G Y +H+DV
Sbjct: 263 ADVVCYDKNGNVIPCLTVAWAAEQIGFTGIGLMYGGAIHLDV 304
>gi|163755153|ref|ZP_02162274.1| Peptidase M15A [Kordia algicida OT-1]
gi|161325220|gb|EDP96548.1| Peptidase M15A [Kordia algicida OT-1]
Length = 174
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 18/100 (18%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV--LGKAVD 159
MD L L +++ P + +I SG R++ N R+ ++ S H KAVD
Sbjct: 61 CMDSGLLMKLQQLEMRTGYPIFDWINSGARSESHN----RKVGGVSSSS-HKIPTCKAVD 115
Query: 160 FYIPGVSLRSLYKIAIR------LKRGGVGYYSKFLHIDV 193
GV + + KR GVG F+H+D
Sbjct: 116 I---GVPSTHIRDQLVYEARNIGFKRIGVG--KTFVHLDT 150
>gi|83858764|ref|ZP_00952286.1| hypothetical protein OA2633_04656 [Oceanicaulis alexandrii
HTCC2633]
gi|83853587|gb|EAP91439.1| hypothetical protein OA2633_04656 [Oceanicaulis alexandrii
HTCC2633]
Length = 340
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 42/134 (31%)
Query: 103 MDPQLFDFLWEI-----QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ P L + L + + E +++SG+RT N + AR S+H+ G A
Sbjct: 207 VSPSLLNRLEALLAEMRADELTRAESFFVMSGFRTPFYNTAI-----GSARLSRHMYGDA 261
Query: 158 VDFY--IPG----------------VSLRSLYKIA-------IRLKRGGVGYY------S 186
D Y + G LY A L GG+G Y
Sbjct: 262 ADIYPDVEGGDSVMDDLDGDGRVTRADANFLYDFADRLFRNREDLDAGGIGAYGANAVHG 321
Query: 187 KFLHID-VGRVRSW 199
F+H+D G W
Sbjct: 322 PFVHVDGRGSRARW 335
>gi|294102719|ref|YP_003554577.1| Peptidase M15A [Aminobacterium colombiense DSM 12261]
gi|293617699|gb|ADE57853.1| Peptidase M15A [Aminobacterium colombiense DSM 12261]
Length = 122
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + L +++ + E I + SGYR N +R +A S HV G+A D +
Sbjct: 31 PPLVECLEKLRSLW--KEPIVLTSGYRCPNHN----KRVGGVA-NSLHVEGRAADVVVMH 83
Query: 165 VSLRSLYKIAIRLKRGGVGYYS--KFLHI 191
++A R + Y F+H+
Sbjct: 84 RYQPLFCELAERAGFTSILPYGKRNFIHL 112
>gi|326391572|ref|ZP_08213103.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325992402|gb|EGD50863.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 229
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK-IARKSQHVLGKAVDFYI 162
D + + ++ I I Y + + NK L+ + +A+ SQH+ GKA D +
Sbjct: 62 DTKTLNQWNNYRKAIGT--PIRITRAYCSVKHNKDLASKYPGQVAKYSQHMAGKAFD-MV 118
Query: 163 P---GVSLRSLYKIAIRLKRGGVGY-YSKFLHID 192
P ++L +YKIA+ V YS +H D
Sbjct: 119 PYYGNITLEQMYKIALSYWT-FVEPDYSSHVHGD 151
>gi|167038251|ref|YP_001665829.1| peptidase M15A [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116659|ref|YP_004186818.1| peptidase M15A [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166857085|gb|ABY95493.1| Peptidase M15A [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929750|gb|ADV80435.1| Peptidase M15A [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 202
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK-IARKSQHVLGKAVDFYI 162
D + + ++ I I Y + + NK L+ + +A+ SQH+ GKA D +
Sbjct: 62 DTKTLNQWNNYRKAIGT--PIRITRAYCSVKHNKDLASKYPGQVAKYSQHMAGKAFD-MV 118
Query: 163 P---GVSLRSLYKIAIRLKRGGVGY-YSKFLHID 192
P ++L +YKIA+ V YS +H D
Sbjct: 119 PYYGNITLEQMYKIALSYWT-FVEPDYSSHVHGD 151
>gi|150005335|ref|YP_001300079.1| hypothetical protein BVU_2811 [Bacteroides vulgatus ATCC 8482]
gi|149933759|gb|ABR40457.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 132
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 96 HSKQSIDMDPQLFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+ + L D L ++ ++ + I + SGYR E N + ++ SQH+
Sbjct: 25 RQEHVTAL-TALVDNVLDPLRTWWG--KPITVNSGYRCPELNAAVKG-----SKTSQHMK 76
Query: 155 GKAVDFYIPGVSLRSL 170
G+A D L
Sbjct: 77 GEAADIDTGDRQQNKL 92
>gi|163796233|ref|ZP_02190194.1| hypothetical protein BAL199_18731 [alpha proteobacterium BAL199]
gi|159178375|gb|EDP62917.1| hypothetical protein BAL199_18731 [alpha proteobacterium BAL199]
Length = 156
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L ++++F V SGYR N + ++ SQHV G+AVDF +PGV+
Sbjct: 48 ILQPVREHFGV--PFAPSSGYRCLVLNTAIGSKST-----SQHVKGEAVDFEVPGVTNAQ 100
Query: 170 LYKIAIR 176
L
Sbjct: 101 LAAWIRD 107
>gi|291298292|ref|YP_003509570.1| zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
44728]
gi|290567512|gb|ADD40477.1| Zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
44728]
Length = 263
Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 85 LSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LN DW + ++ L ++ + I + SG+R+ + N
Sbjct: 127 YAELNDCNSDWSGGKVSAAEAKANALRVMWSLEAMRHALG-DKPITVTSGFRSVQCNN-- 183
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV---GY--YSKFLHIDVG 194
N A SQH+ G++ D SL +L K A G+ GY + H D+
Sbjct: 184 ---NAGGASDSQHLYGRSADLGAGPHSLCTLAKEARSHGFMGIFGPGYDGHDDHTHADIR 240
Query: 195 RVRSWT 200
++W+
Sbjct: 241 STQAWS 246
>gi|257056977|ref|YP_003134809.1| putative peptidoglycan-binding domain-containing protein
[Saccharomonospora viridis DSM 43017]
gi|256586849|gb|ACU97982.1| putative peptidoglycan-binding domain-containing protein
[Saccharomonospora viridis DSM 43017]
Length = 246
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 16/103 (15%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
++ L ++ + + SG+R+ N + + S H+ G+A D +
Sbjct: 148 RVMWQLEAMRHKLG-DRPMVVTSGFRSVSCNSSVGGSST-----SLHLYGQAADLGLSSS 201
Query: 166 SLR-SLYKIAIRLKRG-----GVGYYSKFLHIDVGRV--RSWT 200
+ ++ A G G GY H+ VG R W+
Sbjct: 202 PSQCQMWNSAKS--AGFEEILGPGYPGHNDHVHVGNKSSRFWS 242
>gi|295681347|ref|YP_003609921.1| peptidase M15A [Burkholderia sp. CCGE1002]
gi|295441242|gb|ADG20410.1| Peptidase M15A [Burkholderia sp. CCGE1002]
Length = 150
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L +++ + + SGYR+ N + A S H+ G A DF PG
Sbjct: 38 RTAQTLEQVRALL-CSRPVLVSSGYRSPALNTAV-----GGAANSAHMTGLAADFICPGF 91
Query: 166 --SLRSLYKIAIR 176
L KIA
Sbjct: 92 GSPLEICRKIAAS 104
>gi|217966875|ref|YP_002352381.1| peptidase M15A [Dictyoglomus turgidum DSM 6724]
gi|217335974|gb|ACK41767.1| Peptidase M15A [Dictyoglomus turgidum DSM 6724]
Length = 110
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ + I I SGYR ++ NK + S+H+ G A D +
Sbjct: 32 LLENLEKLIASGLKIKITSGYRCEKHNKEVKG-----VPNSKHMKGMACDITCNDI--EK 84
Query: 170 LYKIAIRLKRGGV--GYYSKFLHIDV 193
Y++A +L V K++H++V
Sbjct: 85 AYEMAQKLGFSYVKIDKLKKYIHMEV 110
>gi|312879212|ref|ZP_07739012.1| Peptidase M15A [Aminomonas paucivorans DSM 12260]
gi|310782503|gb|EFQ22901.1| Peptidase M15A [Aminomonas paucivorans DSM 12260]
Length = 109
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L+ L E+ + + + + SGYR N+ + S H G+AVD P
Sbjct: 26 LYGALRELARRWGG---VRVTSGYRCPSHNRRV-----GGVPGSLHTRGRAVDLACPASR 77
Query: 167 LRSLYKIAIRLKRGGVGYYS--KFLHI 191
L +A L Y F+H+
Sbjct: 78 QGELLALAKELGFDQRIPYPSRGFVHL 104
>gi|239997098|ref|ZP_04717622.1| hypothetical protein AmacA2_21852 [Alteromonas macleodii ATCC
27126]
Length = 324
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 38/127 (29%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L + E + I+SGYRT NK + + S+HV G A DFYI
Sbjct: 203 KLEKILHTLNDEGHAVEGLTIMSGYRTPFYNKAI-----GNVQYSRHVWGGAADFYIDQS 257
Query: 166 SLRSL-----------YKIAIRL---------------KRGGVGYYS------KFLHIDV 193
+ + A+ L + GG+G Y F+H+DV
Sbjct: 258 PKDGVMDDLNKDGVVNREDAVWLANFISNMSKQGAFGPRIGGLGIYGANAAHGPFVHVDV 317
Query: 194 -GRVRSW 199
G + W
Sbjct: 318 RGTLARW 324
>gi|317483875|ref|ZP_07942814.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|317484000|ref|ZP_07942935.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316924727|gb|EFV45878.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316924892|gb|EFV46039.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
Length = 105
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
MD L L E + +P + S YR + NK + S H G AVD
Sbjct: 3 KMDADLLQMLDEARDLAGIPFP--LSSAYRCPKHNKAV-----GGVPTSAHTRGYAVDIR 55
Query: 162 -IPGVSLRSLYKIAIRLKRGGVGYYSKFLHID 192
+ S + + + + ++H+D
Sbjct: 56 CVDSHSRFVMLQALLEAGFRRIELAPTWIHVD 87
>gi|75906460|ref|YP_320756.1| hypothetical protein Ava_0235 [Anabaena variabilis ATCC 29413]
gi|75700185|gb|ABA19861.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 255
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-IPGVSLRSLYKIAIRLKR 179
I I S YRT N+ + AR SQH+ G A+D + G + L +I
Sbjct: 175 DSPISINSAYRTPAVNRRI-----GGARFSQHINGLALDIAPVDG-NFGKLLQICRASDC 228
Query: 180 GGVGY--YSKFLHID 192
G+G + F+H D
Sbjct: 229 TGLGRGMHRGFIHCD 243
>gi|325274512|ref|ZP_08140577.1| peptidase M15A [Pseudomonas sp. TJI-51]
gi|324100352|gb|EGB98133.1| peptidase M15A [Pseudomonas sp. TJI-51]
Length = 143
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ F V I + SGYR+++ N+++ A SQHV G A DF + VS R
Sbjct: 42 LEQVRALFGV--PIIVSSGYRSEKVNRLI-----GGAANSQHVQGLAADFTVIEVSPRE 93
>gi|118591544|ref|ZP_01548941.1| hypothetical protein SIAM614_28152 [Stappia aggregata IAM 12614]
gi|118435872|gb|EAV42516.1| hypothetical protein SIAM614_28152 [Stappia aggregata IAM 12614]
Length = 138
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 144 RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
+ A+ S H+ +AVDF + G + + + + GG +Y S HID+G R+W
Sbjct: 82 KGGAKDSYHLNCRAVDFSVRGNPSSVIAFLKAQPEVGGYKHYSSGHYHIDIGPRRTW 138
>gi|256823024|ref|YP_003146987.1| peptidase M15A [Kangiella koreensis DSM 16069]
gi|256796563|gb|ACV27219.1| Peptidase M15A [Kangiella koreensis DSM 16069]
Length = 331
Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 37/112 (33%)
Query: 120 VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF--------YIPGVSLR--- 168
+ I+SGYRT NK + +A S+HV G A D + ++
Sbjct: 223 RTDSFVIMSGYRTPAYNKAIG----NVA-NSRHVYGDASDIFIDTLANGRMDDINGDGKV 277
Query: 169 ------SLYKIAIRLKR--------GGVGYY------SKFLHIDV-GRVRSW 199
LY+ A + GG+G Y F+H+DV G W
Sbjct: 278 NEKDAFRLYEFANNPETHDHRDDLIGGIGVYKPNAVRGPFVHVDVRGTKARW 329
>gi|81299566|ref|YP_399774.1| hypothetical protein Synpcc7942_0755 [Synechococcus elongatus PCC
7942]
gi|81168447|gb|ABB56787.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 192
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 16/116 (13%)
Query: 92 LYDWHSKQSIDMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
D+ ++ + + L L +++ F + + S +R TN +
Sbjct: 83 FDDFRRQRVTAENKRRIVKLAARLDVLRKQFG---PLGVTSWFRDPVTNARV-----GGV 134
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY----YSKFLHIDVGRVRSW 199
S H+ G A D + + + + GGVG +F+H+D G W
Sbjct: 135 DDSYHLTGGAADVFPLQFNPLEFEQWCEQNWNGGVGRGIKAGRRFVHLDDGPKGVW 190
>gi|317486758|ref|ZP_07945574.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316921921|gb|EFV43191.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
Length = 127
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 8/96 (8%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
M+ L L E++ + + + S YR N+ + S H G A
Sbjct: 21 GGIEHMNQDLLMMLDEVRDRAGI--PLVLSSAYRCPAHNQAV-----GGVDDSAHTRGYA 73
Query: 158 VDFY-IPGVSLRSLYKIAIRLKRGGVGYYSKFLHID 192
VD I + + + A+ + + ++H+D
Sbjct: 74 VDIKCINSHTRFLILQAALEVGFRRIELAPTWVHLD 109
>gi|281426072|ref|ZP_06256985.1| peptidase M15 family protein [Prevotella oris F0302]
gi|281399796|gb|EFB30627.1| peptidase M15 family protein [Prevotella oris F0302]
Length = 162
Score = 54.4 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+ L +++ F I I SGYR++ NK + SQH+ G+A D +IP
Sbjct: 61 LNVLEPLRKRFGR---IIITSGYRSEALNKAVCGE-----PSSQHLKGEAADIHIP 108
>gi|288573542|ref|ZP_06391899.1| Peptidase M15A [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569283|gb|EFC90840.1| Peptidase M15A [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 111
Score = 54.4 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
++ + P+L L ++ + + I SGYR N + +S+H+ G A D
Sbjct: 24 TVRLQPELLSRLEALRGRWG---PLRITSGYRCPRHNSEV-----GGVPRSRHMKGAAAD 75
Query: 160 FYIP 163
+
Sbjct: 76 VVVS 79
>gi|291298964|ref|YP_003510242.1| zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
44728]
gi|290568184|gb|ADD41149.1| Zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
44728]
Length = 242
Score = 54.4 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 12/91 (13%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L ++ + I + SG+R++ N + A SQH+ G A D + S
Sbjct: 145 TMWKLEAMRHALG-DKSISVSSGFRSKACNDAV-----GGASNSQHMTGSAADL-VGSHS 197
Query: 167 LRSLYKIAIRLKRG---GVGY--YSKFLHID 192
L +L K A G G GY + +H+D
Sbjct: 198 LCTLAKQARYHGFGTILGPGYDGHGDHVHLD 228
>gi|157831772|pdb|1LBU|A Chain A, Hydrolase Metallo (Zn) Dd-Peptidase
Length = 213
Score = 54.4 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 20/128 (15%)
Query: 85 LSQLNRLLYDWHSKQSIDMDPQ-----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LNR DW + + L ++ + I + G+R+ N +
Sbjct: 88 YAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCNSNV 146
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG-----GVGY--YSKFLHID 192
A S+H+ G A D +L + A G G GY ++ H+
Sbjct: 147 -----GGASNSRHMYGHAADLGAGSQGFCALAQAAR--NHGFTEILGPGYPGHNDHTHVA 199
Query: 193 VGRVRSWT 200
G R W+
Sbjct: 200 GGDGRFWS 207
>gi|56750787|ref|YP_171488.1| hypothetical protein syc0778_c [Synechococcus elongatus PCC 6301]
gi|56685746|dbj|BAD78968.1| unknown protein [Synechococcus elongatus PCC 6301]
Length = 192
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 16/116 (13%)
Query: 92 LYDWHSKQSIDMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIA 147
D+ ++ + + L L +++ F + + S +R TN +
Sbjct: 83 FDDFRRQRVTAENKRRIVKLAARLDVLRKQFG---PLGVTSWFRDPVTNARV-----GGV 134
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY----YSKFLHIDVGRVRSW 199
S H+ G A D + + + GGVG +F+H+D G W
Sbjct: 135 DDSYHLTGGAADVSPLQFNPLEFEQWCEQNWNGGVGRGIKAGRRFVHLDDGPKGVW 190
>gi|239944015|ref|ZP_04695952.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
roseosporus NRRL 15998]
gi|239990470|ref|ZP_04711134.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
roseosporus NRRL 11379]
gi|291447483|ref|ZP_06586873.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces roseosporus NRRL
15998]
gi|291350430|gb|EFE77334.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces roseosporus NRRL
15998]
Length = 259
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 20/128 (15%)
Query: 85 LSQLNRLLYDWHSKQSIDMDPQ-----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LNR DW + + L ++ I + G+R+ N +
Sbjct: 134 YAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRHAMG-DRPITVNGGFRSVSCNSAV 192
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG-----GVGY--YSKFLHID 192
A S+H+ G A D +L + A G G GY ++ H+
Sbjct: 193 -----GGAANSRHMYGHAADLGAGSQGFCALAQAAR--NHGFTEILGPGYPGHNDHTHVA 245
Query: 193 VGRVRSWT 200
G R W+
Sbjct: 246 GGSGRFWS 253
>gi|239982441|ref|ZP_04704965.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces albus
J1074]
gi|291454288|ref|ZP_06593678.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces albus J1074]
gi|729061|sp|P00733|CBPM_STRAL RecName: Full=Zinc D-Ala-D-Ala carboxypeptidase; AltName:
Full=D-alanyl-D-alanine carboxypeptidase; AltName:
Full=Metallo DD-peptidase; AltName: Full=Zn
DD-peptidase; Flags: Precursor
gi|288967|emb|CAA39319.1| metallo (Zn) DD-peptidase [Streptomyces albus]
gi|291357237|gb|EFE84139.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces albus J1074]
gi|228101|prf||1717223A DD peptidase
Length = 255
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 20/128 (15%)
Query: 85 LSQLNRLLYDWHSKQSIDMDPQ-----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LNR DW + + L ++ + I + G+R+ N +
Sbjct: 130 YAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRHAMG-DKPITVNGGFRSVTCNSNV 188
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG-----GVGY--YSKFLHID 192
A S+H+ G A D +L + A G G GY ++ H+
Sbjct: 189 -----GGASNSRHMYGHAADLGAGSQGFCALAQAAR--NHGFTEILGPGYPGHNDHTHVA 241
Query: 193 VGRVRSWT 200
G R W+
Sbjct: 242 GGDGRFWS 249
>gi|50084894|ref|YP_046404.1| hypothetical protein ACIAD1742 [Acinetobacter sp. ADP1]
gi|49530870|emb|CAG68582.1| hypothetical protein; putative signal peptide [Acinetobacter sp.
ADP1]
Length = 235
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 23/107 (21%)
Query: 111 LWEIQQYF--SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSL 167
L +Q+ + + S YR+ N + A++S H+ AVDF I P
Sbjct: 118 LKLLQKLVNIGILTDFELTSAYRSPLLNACV-----GGAKESSHMQNAAVDFRIGPEFPT 172
Query: 168 R----SLYKIAIRLKR-----G-----GVGYYS-KFLHIDVGRVRSW 199
+ I+L + G G+G YS +HID R+W
Sbjct: 173 SFEETDIADTKIKLCKFWQTEGAKYNMGLGVYSTGQIHIDTKGFRTW 219
>gi|218782369|ref|YP_002433687.1| peptidase M15A [Desulfatibacillum alkenivorans AK-01]
gi|218763753|gb|ACL06219.1| Peptidase M15A [Desulfatibacillum alkenivorans AK-01]
Length = 116
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 13/98 (13%)
Query: 109 DFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
+FL + + + I SGYR + N+ + ++ S H++G A D
Sbjct: 23 EFLQRLDRARGIAGVPFVINSGYRCKSHNRAV-----GGSKCSSHMIGWAADIKATDDKS 77
Query: 168 RSLYKIAIRLKRGG--VGYYSKFLHIDVGRV----RSW 199
R + + G +G F+H+D R+W
Sbjct: 78 RGHILYGLYM-AGFTRIGIRKDFIHVDADPAKNEKRTW 114
>gi|326566332|gb|EGE16482.1| hypothetical protein E9Q_07894 [Moraxella catarrhalis BC1]
Length = 181
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 20/94 (21%)
Query: 111 LWE-IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP--GVSL 167
LW+ ++ V I I SGYR NK + + S H+ G A+DF P G
Sbjct: 78 LWQPVRDILGV--PIIISSGYRCSVLNKAV-----GGSANSAHMSGFAIDFRSPRFGTPK 130
Query: 168 RSLYKIAIRLKRGGVGY------YSK----FLHI 191
+ I LK G+G+ Y K ++H+
Sbjct: 131 IIVPHIVKILKEKGIGFDQAIIEYPKSPRSWVHL 164
>gi|239933149|ref|ZP_04690102.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
ghanaensis ATCC 14672]
Length = 225
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L ++ + I + SG+R+ N + A S+H+ G A D
Sbjct: 126 RTMWKLEALRHALG-DQPIRVTSGFRSHACNDAV-----GGASGSRHLYGDAADLGAGPH 179
Query: 166 SLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
SL +L K A G+ GY ++ H+D + W+
Sbjct: 180 SLCTLAKQARYHGFRGILGPGYPGHNDHTHVDHRGSQYWS 219
>gi|182436235|ref|YP_001823954.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326776864|ref|ZP_08236129.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
XylebKG-1]
gi|178464751|dbj|BAG19271.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326657197|gb|EGE42043.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
XylebKG-1]
Length = 260
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 20/128 (15%)
Query: 85 LSQLNRLLYDWHSKQSIDMDPQ-----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LNR DW + + L ++ I + G+R+ N +
Sbjct: 135 YAELNRCNSDWSGGKVSAGTARANALVTMWKLQAMRHAMG-DRPITVNGGFRSVSCNSAV 193
Query: 140 SRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG-----GVGY--YSKFLHID 192
A S+H+ G A D +L + A G G GY ++ H+
Sbjct: 194 -----GGAANSRHMYGHAADLGAGSQGFCALAQAAR--NHGFTEILGPGYPGHNDHTHVA 246
Query: 193 VGRVRSWT 200
G R W+
Sbjct: 247 GGSGRFWS 254
>gi|326328746|ref|ZP_08195084.1| zinc D-Ala-D-Ala carboxypeptidase [Nocardioidaceae bacterium
Broad-1]
gi|325953489|gb|EGD45491.1| zinc D-Ala-D-Ala carboxypeptidase [Nocardioidaceae bacterium
Broad-1]
Length = 251
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Query: 100 SIDMDPQLFDFLWE---IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ L +W I+ + + S YR++ N + A S H+ G+
Sbjct: 143 ITQVKANLMQAMWRAEAIRHRLG-DNPLRVTSAYRSKACNDAV-----GGASNSNHLYGR 196
Query: 157 AVDFYIPGVSLRSLYKIAIRLKRG-----GVGYYSKFLHIDVG 194
A+D +PG S ++ IA ++ G GY HI +G
Sbjct: 197 AMDL-VPGSSATTMCGIARASRQSFPQVLGPGYPDHSDHIHLG 238
>gi|294675398|ref|YP_003576014.1| hypothetical protein PRU_2772 [Prevotella ruminicola 23]
gi|294472895|gb|ADE82284.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 156
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
L ++ + I + SGYR Q N+M+ SQH+ G+A D IP
Sbjct: 51 LEPVRCQLGL--PIKVNSGYRCQLLNQMV-----GGVPTSQHLKGEAADITIP 96
>gi|291441499|ref|ZP_06580889.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces ghanaensis
ATCC 14672]
gi|291344394|gb|EFE71350.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces ghanaensis
ATCC 14672]
Length = 245
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+ L ++ + I + SG+R+ N + A S+H+ G A D
Sbjct: 146 RTMWKLEALRHALG-DQPIRVTSGFRSHACNDAV-----GGASGSRHLYGDAADLGAGPH 199
Query: 166 SLRSLYKIAIRLKRGGV---GY--YSKFLHIDVGRVRSWT 200
SL +L K A G+ GY ++ H+D + W+
Sbjct: 200 SLCTLAKQARYHGFRGILGPGYPGHNDHTHVDHRGSQYWS 239
>gi|167646443|ref|YP_001684106.1| peptidase M15A [Caulobacter sp. K31]
gi|167348873|gb|ABZ71608.1| Peptidase M15A [Caulobacter sp. K31]
Length = 146
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 11/77 (14%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+L + ++ F I I S YR + N + S H LG A DF++ G
Sbjct: 36 KRLAVSMEAVRALFD--RPIEITSAYRNPQVNAAV-----GGVPTSAHALGHAADFHVDG 88
Query: 165 V----SLRSLYKIAIRL 177
V + + + ++
Sbjct: 89 VADLDAAKRVRDSGLKF 105
>gi|256842332|ref|ZP_05547836.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256736216|gb|EEU49546.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 138
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L + L + + +YI+SGYR++E N++L A SQH+ G+AVD Y
Sbjct: 46 RLLEPLRIYHR-----QPMYIMSGYRSEELNRLL-----GGAPSSQHMKGEAVDIY 91
>gi|299142481|ref|ZP_07035613.1| peptidase M15 superfamily [Prevotella oris C735]
gi|298576203|gb|EFI48077.1| peptidase M15 superfamily [Prevotella oris C735]
Length = 140
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+ L +++ F I I SGYR++ NK + SQH+ G+A D +IP
Sbjct: 39 LNVLEPLRKRFGR---IIITSGYRSEALNKAVFGE-----PSSQHLKGEAADIHIP 86
>gi|187251482|ref|YP_001875964.1| peptidase M15A [Elusimicrobium minutum Pei191]
gi|186971642|gb|ACC98627.1| Peptidase M15A [Elusimicrobium minutum Pei191]
Length = 157
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
D L + + + + I S +R + NK+L A SQH+ G+A DF + VS
Sbjct: 44 DILERVYDMY-AKKPL-ITSAFRCADLNKVL-----GGAPNSQHIKGEAADFILEEVSNE 96
Query: 169 SL 170
+
Sbjct: 97 EI 98
>gi|289825305|ref|ZP_06544577.1| hypothetical protein Salmonellentericaenterica_07931 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 65
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 16/51 (31%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQY 80
+ +L + S + L R L + + TG F G Y
Sbjct: 11 LLALGGVALGAAILPSPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAY 61
>gi|326568788|gb|EGE18858.1| Peptidase M15A [Moraxella catarrhalis BC8]
Length = 181
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 19/96 (19%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP--GV 165
+ +++ V I I SGYR NK + + S H+ G A+DF P G
Sbjct: 76 VNLYQPVREILGV--AIIISSGYRCPALNKAV-----GGSATSAHMSGFAIDFTAPKFGT 128
Query: 166 SLRSLYKIAIRLKRGGVGY------YSK----FLHI 191
+ I LK+ G+G+ Y K ++H+
Sbjct: 129 PKLIVPHIVKILKQKGIGFDQAIIEYPKSPRSWVHL 164
>gi|187251344|ref|YP_001875826.1| peptidase M15A [Elusimicrobium minutum Pei191]
gi|186971504|gb|ACC98489.1| Peptidase M15A [Elusimicrobium minutum Pei191]
Length = 151
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 21/101 (20%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L +F ++ V + I S R E N+ + ++ SQH+ +A+DF G+
Sbjct: 46 KLANFGETVRTVLGV--PMIITSAIRCPELNE-----SIGGSKTSQHMKCEAIDFICRGI 98
Query: 166 SLRSLYKIAIRL----------KRGGVGYYSKFLHIDVGRV 196
+ ++ + + GG +++HI +G
Sbjct: 99 GVARIFDLIRESNLTFGQLILEQAGG----KEWIHISIGNK 135
>gi|171060728|ref|YP_001793077.1| peptidase M15A [Leptothrix cholodnii SP-6]
gi|170778173|gb|ACB36312.1| Peptidase M15A [Leptothrix cholodnii SP-6]
Length = 236
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ + I + SGYR N RR + A+ SQH+ G+A D PG ++ +
Sbjct: 42 VLDPLREAIG--KPIKVTSGYRGPVLN----RRVKGAAK-SQHLRGEAADLQSPGTAVLA 94
Query: 170 LYKIAIRLK 178
L+K IRL
Sbjct: 95 LFKRVIRLG 103
>gi|53713639|ref|YP_099631.1| hypothetical protein BF2347 [Bacteroides fragilis YCH46]
gi|52216504|dbj|BAD49097.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 140
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 97 SKQSIDMDPQLFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+ + + +L + L +++ + + I + SGYR+ N R+ A SQH+LG
Sbjct: 34 TGEVVHNLTELVENVLDPLREKYG--KPIRVSSGYRSAVLN-----RSVNGATSSQHLLG 86
Query: 156 KAVDFYI 162
+A D +
Sbjct: 87 QAADITV 93
>gi|294778651|ref|ZP_06744073.1| peptidase M15 [Bacteroides vulgatus PC510]
gi|294447600|gb|EFG16178.1| peptidase M15 [Bacteroides vulgatus PC510]
Length = 132
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 96 HSKQSIDMDPQLFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
+ + L D L ++ ++ + I + SGYR E N + ++ SQH+
Sbjct: 25 RQEHVTAL-TALVDNVLDPLRTWWG--KPITVNSGYRCLELNAAVKG-----SKTSQHMK 76
Query: 155 GKAVDFYIPGVSLRSL 170
G+A D L
Sbjct: 77 GEAADIDTGDRQQNKL 92
>gi|288926757|ref|ZP_06420668.1| peptidase M15 superfamily [Prevotella buccae D17]
gi|288336487|gb|EFC74862.1| peptidase M15 superfamily [Prevotella buccae D17]
Length = 167
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 106 QLF--DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+L + L +++ F I I SGYR + N+ + +A SQH+LG+A D ++P
Sbjct: 67 RLLCEEVLEPLRRRFGC---IRITSGYRCETLNRAV----GGVA-NSQHLLGEAADIFVP 118
>gi|167032658|ref|YP_001667889.1| peptidase M15A [Pseudomonas putida GB-1]
gi|166859146|gb|ABY97553.1| Peptidase M15A [Pseudomonas putida GB-1]
Length = 143
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS-LY 171
+++ F I + SGYR+++ N+++ A SQHV G A DF + VS R +
Sbjct: 44 QVRALFDA--PIIVSSGYRSEKVNRLI-----GGAVSSQHVQGLAADFTVVEVSPRETVR 96
Query: 172 KIAIRLKRGGVGY------YSKFLHIDVGR 195
+I+ GV + + K++H+ V R
Sbjct: 97 RISES----GVPFDQLILEFDKWVHLSVAR 122
>gi|78358407|ref|YP_389856.1| hypothetical protein Dde_3367 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220812|gb|ABB40161.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 165
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 24/102 (23%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L I++ I I SGYR + N + + S H+ G A D +PG S
Sbjct: 45 LTLLQPIREALG---PITISSGYRPKWLNDHI-----GGSPSSDHLTGLAADIIVPGRSP 96
Query: 168 RSLYKIAIRLKRGGVGYY-------SKFLHI-----DVGRVR 197
+ + G Y ++++HI D R
Sbjct: 97 LDVARFISSQNLG----YKQLINEHNRWVHIASPGPDTMPRR 134
>gi|148548837|ref|YP_001268939.1| peptidase M15A [Pseudomonas putida F1]
gi|148512895|gb|ABQ79755.1| Peptidase M15A [Pseudomonas putida F1]
Length = 143
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS- 169
L +++ F I I SGYR++ N+++ A SQHV G A DF + VS R
Sbjct: 42 LEQVRALFDA--PIIISSGYRSERVNRLI-----GGASDSQHVQGLAADFTVIEVSPRET 94
Query: 170 LYKIAIR 176
+ +++
Sbjct: 95 VRRVSES 101
>gi|282879292|ref|ZP_06288037.1| peptidase M15 [Prevotella buccalis ATCC 35310]
gi|281298574|gb|EFA90998.1| peptidase M15 [Prevotella buccalis ATCC 35310]
Length = 140
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+ L ++ F IYI SGYR + N +L SQH+ G+A D +P
Sbjct: 40 EVLDPLRHRFG---PIYINSGYRCELLNNLLHGVG-----NSQHLFGEAADIRLP 86
>gi|26988833|ref|NP_744258.1| peptidase M15A [Pseudomonas putida KT2440]
gi|24983636|gb|AAN67722.1|AE016403_7 conserved domain protein [Pseudomonas putida KT2440]
Length = 143
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS- 169
L +++ F I I SGYR++ N+++ A SQHV G A DF + VS R
Sbjct: 42 LEQVRALFDA--PIIISSGYRSERVNRLI-----GGASDSQHVQGLAADFTVIEVSPRET 94
Query: 170 LYKIAIR 176
+ +I+
Sbjct: 95 VRRISKS 101
>gi|313499770|gb|ADR61136.1| Peptidase M15A [Pseudomonas putida BIRD-1]
Length = 143
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS- 169
L +++ F I I SGYR++ N+++ A SQHV G A DF + VS R
Sbjct: 42 LEQVRALFDA--PIIISSGYRSERVNRLI-----GGASDSQHVQGLAADFTVIEVSPRET 94
Query: 170 LYKIAIR 176
+ +I+
Sbjct: 95 VRRISES 101
>gi|325270478|ref|ZP_08137080.1| peptidase M15 superfamily protein [Prevotella multiformis DSM
16608]
gi|324987201|gb|EGC19182.1| peptidase M15 superfamily protein [Prevotella multiformis DSM
16608]
Length = 163
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +++ + I SGYR + N+ + AR SQH G+A D ++ G
Sbjct: 67 VLEPLRRQVGR---VIITSGYRCEALNEAVEG-----ARHSQHQRGEAADIHVTG--TEM 116
Query: 170 LYKIAIRLKR 179
K A L+R
Sbjct: 117 CRKYAAILRR 126
>gi|320158430|ref|YP_004190808.1| peptidase M15A [Vibrio vulnificus MO6-24/O]
gi|319933742|gb|ADV88605.1| peptidase M15A [Vibrio vulnificus MO6-24/O]
Length = 118
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
L + L +++ + + I + S YR N R + R HV G AVD G
Sbjct: 27 LVNRLDLLRELWG--KPIVLSSAYRC--HNHPEERHKDTVGR---HVQGIAVDIKYTGGE 79
Query: 167 LRSLYKIAIRLKRGGVGYYSKFLHID 192
L L +A L G G FLHID
Sbjct: 80 LIELIALAKSLGFKGFGIAKTFLHID 105
>gi|153806844|ref|ZP_01959512.1| hypothetical protein BACCAC_01119 [Bacteroides caccae ATCC 43185]
gi|149131521|gb|EDM22727.1| hypothetical protein BACCAC_01119 [Bacteroides caccae ATCC 43185]
Length = 135
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 107 LFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
L D L +++ + + + + SGYR + NK + ++ S+H+ G A D
Sbjct: 36 LIDNVLDPLREAYG--KPVTVTSGYRCEVLNKAV-----GGSKTSEHMKGMAADI 83
>gi|261347048|ref|ZP_05974692.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
gi|282564849|gb|EFB70384.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
Length = 57
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 122 EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ +Y++SG R + NK + A SQH+LG A D + V+ +
Sbjct: 1 KPVYVVSGRRCAKHNKAV-----GGAEHSQHLLGTAGDIKVKDVTPK 42
>gi|218133274|ref|ZP_03462078.1| hypothetical protein BACPEC_01139 [Bacteroides pectinophilus ATCC
43243]
gi|217992147|gb|EEC58151.1| hypothetical protein BACPEC_01139 [Bacteroides pectinophilus ATCC
43243]
Length = 316
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQ-ETNKMLSRRNRKIARKSQHVLGKAVD-- 159
+D L D L +I ++F+ + + I G+R E + + +R H G A D
Sbjct: 34 VDEALIDMLEKIYKHFNCSKAV-INDGFRQPGEYCRSIGESDRDA-----HAYGMAADVV 87
Query: 160 -FYIPG--VSLRSLYKIAIRLKRGGVGYYSKFLHIDV 193
F G +S R + A + G+GY +H+D
Sbjct: 88 FFDSEGDVISGRYICCYAQDIGVQGIGYMGNAVHLDT 124
>gi|167041100|gb|ABZ05861.1| putative bacterial protein of unknown function (DUF882) [uncultured
marine microorganism HF4000_48F7]
Length = 140
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 21/129 (16%)
Query: 90 RLLYD-----WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR-- 142
D + + MD L E+++ + + +++ S +RT++ + ++
Sbjct: 14 HFSRDELKCSFAPDAPVLMDSLFMAALEELREEWG--KPMHLSSAFRTEDHPRERTKPIK 71
Query: 143 ----NRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK-------FLHI 191
+ + H G+AVD I G + ++A++ GVG K F+H+
Sbjct: 72 YDHLGNPLPKGGMHARGRAVDVLIAGSDAVAFLRLALKY-FSGVGLSQKDKNWSNRFIHL 130
Query: 192 DVGRVRSWT 200
D G+ R WT
Sbjct: 131 DDGKQRIWT 139
>gi|218781316|ref|YP_002432634.1| peptidase M15A [Desulfatibacillum alkenivorans AK-01]
gi|218762700|gb|ACL05166.1| Peptidase M15A [Desulfatibacillum alkenivorans AK-01]
Length = 318
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 38/111 (34%)
Query: 122 EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS------------ 169
+I+SGYRT N+ + + S+HV G A D +I + +
Sbjct: 211 NSFHIMSGYRTPYYNEAI-----GNVKYSRHVWGGAADIFIDENPVDNMMDDLNGDGKIN 265
Query: 170 ------LYKIAIRLKR--------GGVGYYSK------FLHIDVGRVR-SW 199
LY I +L GG+G Y K F+H+DV R W
Sbjct: 266 YRDSRVLYDIVDKLYGKKWYERFVGGLGNYKKTSQHGPFVHVDVRGFRARW 316
>gi|262382019|ref|ZP_06075157.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297196|gb|EEY85126.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 92
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI---PGVS 166
+ ++ E I I SGYR N+++ SQH G+A D Y P
Sbjct: 1 MIQPLRDRLG--EPIAITSGYRCPGVNRLV-----GGVVNSQHTRGEAADCYAACGPERL 53
Query: 167 LRSLYKIAIRLKRGGVGYYSKFLHI 191
L L + + V KFLH+
Sbjct: 54 LEVLIDSGLSFDQAIVYRKKKFLHL 78
>gi|294675516|ref|YP_003576132.1| hypothetical protein PRU_2898 [Prevotella ruminicola 23]
gi|294471688|gb|ADE81077.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 160
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 120 VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI 175
+ I I SGYR+ + N+ + A S H+ G AVD G +Y +
Sbjct: 56 ASQPIIINSGYRSPQLNRKV-----GGAPTSNHLTGCAVDIRTSGYEQAIVYAAIL 106
>gi|301307948|ref|ZP_07213903.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
gi|300834089|gb|EFK64704.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
Length = 138
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L + L + + +YI+SGYR++E N+++ A SQH+ G+AVD Y
Sbjct: 46 RLLEPLRIYHR-----QPMYIMSGYRSEELNRLV-----GGAPSSQHMKGEAVDIY 91
>gi|255016466|ref|ZP_05288592.1| hypothetical protein B2_21376 [Bacteroides sp. 2_1_7]
Length = 138
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L + L + + +YI+SGYR++E N+++ A SQH+ G+AVD Y
Sbjct: 46 RLLEPLRIYHR-----QPMYIMSGYRSEELNRLV-----GGAPSSQHMKGEAVDIY 91
>gi|17229917|ref|NP_486465.1| hypothetical protein all2425 [Nostoc sp. PCC 7120]
gi|17131517|dbj|BAB74124.1| all2425 [Nostoc sp. PCC 7120]
Length = 255
Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-IPGVSLRSLYKIAIRLKR 179
I I S YRT N+ + AR SQH+ G A+D + G + L +I
Sbjct: 175 DSPISINSAYRTSAVNRRI-----GGARFSQHINGLALDIAPVDG-NFGKLLQICRASDC 228
Query: 180 GGVGY--YSKFLHID 192
G+G + F+H D
Sbjct: 229 TGLGRGMHRGFIHCD 243
>gi|313682471|ref|YP_004060209.1| peptidase m15a [Sulfuricurvum kujiense DSM 16994]
gi|313155331|gb|ADR34009.1| Peptidase M15A [Sulfuricurvum kujiense DSM 16994]
Length = 121
Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 12/99 (12%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
++ L D L E + V I +G R ++ N + + S H+ G A D
Sbjct: 22 NISDALLDKLDEARDISGV--PFSINAGTRCKKHNSDPNVKGE---PDSAHLYGYAADI- 75
Query: 162 IPGVSLRSLYKIAIR--LKRGGV--GYYSKFLHIDVGRV 196
I LK G V G Y F+H D+
Sbjct: 76 --SAKTSQQKFAIISSLLKVGFVRIGVYDTFIHADIDPK 112
>gi|171911040|ref|ZP_02926510.1| hypothetical protein VspiD_07690 [Verrucomicrobium spinosum DSM
4136]
Length = 623
Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 35/107 (32%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF--------YIPGVS--------- 166
I++ SGYRT NK L S+H+ G A D + ++
Sbjct: 456 IFVASGYRTPAYNKALGNTT----VYSRHLYGDAADILVDQDRDARLDDLNKDGKVDAKD 511
Query: 167 ----LRSLYKIAIRLKR---GGVGYYS------KFLHIDV-GRVRSW 199
+ + +++ GG+G Y F+H D G W
Sbjct: 512 TVWLTKLVAEVSSSFPAAFEGGLGLYPFKSPATAFIHTDTRGEPTRW 558
>gi|315608776|ref|ZP_07883754.1| peptidase M15 superfamily protein [Prevotella buccae ATCC 33574]
gi|315249626|gb|EFU29637.1| peptidase M15 superfamily protein [Prevotella buccae ATCC 33574]
Length = 144
Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 106 QLF--DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+L + L +++ F I I SGYR + N+ + +R SQH+LG+A D ++P
Sbjct: 44 RLLCEEVLEPLRRRFGC---IRITSGYRCETLNRAVGGVSR-----SQHLLGEAADIFVP 95
>gi|262382322|ref|ZP_06075459.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295200|gb|EEY83131.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 141
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 17/92 (18%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE-----IQQYFSVPEYIYILS 128
+ ++ ++ D M ++ L E +++ + I I S
Sbjct: 3 YFNYQEFEDSATAR-----RDGIDNSLTPMARRMVTILVEMLLDPLRRVWGS--PIVISS 55
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
GYR E N ++ A+ S H+LG A D
Sbjct: 56 GYRCPELNILI-----GGAKHSHHLLGCAADL 82
>gi|294674173|ref|YP_003574789.1| hypothetical protein PRU_1484 [Prevotella ruminicola 23]
gi|294473918|gb|ADE83307.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 155
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+L +L +++ I I SGYR+ + N+ + A S H+ G A D G
Sbjct: 44 KRLCTWLEALRERTGRS--IVINSGYRSPQLNRKV-----GGAPTSNHLTGCAADIRTSG 96
Query: 165 VSLRSLYKIAI 175
+ Y +
Sbjct: 97 MEQAITYAAIL 107
>gi|260655198|ref|ZP_05860686.1| peptidase M15 family protein [Jonquetella anthropi E3_33 E1]
gi|260630120|gb|EEX48314.1| peptidase M15 family protein [Jonquetella anthropi E3_33 E1]
Length = 113
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P+L + ++ + + I SG R N+ + +S+H+ G+AVD
Sbjct: 31 PELDAAVKKLWERVG---PLRITSGTRCPSHNRAV-----GGVPRSRHLRGRAVDVAADS 82
Query: 165 VSLRSLYKIAIRLKRGGVGYYS--KFLHI 191
LR++ ++A + Y ++H+
Sbjct: 83 GLLRAICRVAEECGFNQILPYQEKGYVHL 111
>gi|150006806|ref|YP_001301549.1| hypothetical protein BDI_0132 [Parabacteroides distasonis ATCC
8503]
gi|149935230|gb|ABR41927.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 142
Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L + L + + +YI+SGYR++E N+++ A SQH+ G+AVD Y
Sbjct: 46 RLLEPLRIYHR-----QPMYIMSGYRSEELNRLV-----GGAPSSQHMKGEAVDIY 91
>gi|260910812|ref|ZP_05917461.1| hypothetical protein HMPREF6745_1416 [Prevotella sp. oral taxon 472
str. F0295]
gi|260635077|gb|EEX53118.1| hypothetical protein HMPREF6745_1416 [Prevotella sp. oral taxon 472
str. F0295]
Length = 158
Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
L +++ F V I I SGYR ++ N + + SQH+LG+A D ++
Sbjct: 50 HVLEPLRRRFGV---IRITSGYRCEQLNNAVYGK-----PNSQHLLGQAADIHLS 96
>gi|268609021|ref|ZP_06142748.1| peptidase M15A [Ruminococcus flavefaciens FD-1]
Length = 182
Score = 51.3 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 21/108 (19%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+++ M L D L ++ + + IYI SGYR N H G A
Sbjct: 19 GKTVKMSDLLIDRLEKMHKLMAAKA-IYINSGYRC--NNNPWGSPTDA------HRRGMA 69
Query: 158 VDFYI---PG--VSLRSLYKIAIRLKRGGV-------GYYSKFLHIDV 193
D + G + + + A R+ G+ G H+D
Sbjct: 70 ADIRVQRKDGSYYTSEDIAEAAERVGFKGIGMMEDLSGINPPACHVDT 117
>gi|167031745|ref|YP_001666976.1| hypothetical protein PputGB1_0730 [Pseudomonas putida GB-1]
gi|166858233|gb|ABY96640.1| protein of unknown function DUF882 [Pseudomonas putida GB-1]
Length = 191
Score = 51.3 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 119 SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG-VSLRSLYKIAIRL 177
+ ++S YR N A S H+ AVD +P L +
Sbjct: 96 GILRQFEVVSAYREPRLNA-----CAGGAANSAHMRAFAVDILLPAWADPNPLCRF--WQ 148
Query: 178 KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +H+D R+W
Sbjct: 149 QHGQAWNMGLGRYPSGRIHVDTAGYRTW 176
>gi|93006310|ref|YP_580747.1| peptidase M15A [Psychrobacter cryohalolentis K5]
gi|92393988|gb|ABE75263.1| Peptidase M15A [Psychrobacter cryohalolentis K5]
Length = 313
Score = 51.0 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 21/107 (19%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
QL+ L Q I S YR+ N A S+H+ A+D ++P
Sbjct: 202 QLYSQLKS-QGILPANSEIR--SVYRSPGLND-----CAGGASSSKHMTAGAIDIWVPDY 253
Query: 166 --SLRSLYKIAIRLK-----RG-----GVGYYS-KFLHIDVGRVRSW 199
S L ++ L +G G+G YS +H+D R W
Sbjct: 254 ESSPWQLSRMQDSLCEFWQYQGQSHNFGLGLYSTGAIHLDTDGYRKW 300
>gi|301308469|ref|ZP_07214423.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
gi|300833939|gb|EFK64555.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
Length = 167
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 19/110 (17%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE-----IQQYFSVPEYIYILS 128
+ ++ ++ D + ++ L E ++Q + I I S
Sbjct: 29 YFNYQEFEDSATAR-----RDGIDNSLTPVARRMVTILVEMLLDPLRQVWG--RPIVISS 81
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK 178
GYR E N ++ A+ S H+LG A D I G S ++ ++
Sbjct: 82 GYRCPELNILI-----GGAKHSHHLLGCAADL-IAG-SPDDHRRLFRLIQ 124
>gi|294789341|ref|ZP_06754579.1| peptidase M15 superfamily [Simonsiella muelleri ATCC 29453]
gi|294482766|gb|EFG30455.1| peptidase M15 superfamily [Simonsiella muelleri ATCC 29453]
Length = 193
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY-K 172
+ + + I I SG+R+ N+ + A S H G A D G+S++ L
Sbjct: 68 LAEKYGRMIPIRITSGFRSHAVNRAV-----GGAPTSAHRFGNAADIQAVGLSVKQLAYD 122
Query: 173 IAIRLKRG 180
I ++ G
Sbjct: 123 IFEFIQSG 130
>gi|148653582|ref|YP_001280675.1| hypothetical protein PsycPRwf_1785 [Psychrobacter sp. PRwf-1]
gi|148572666|gb|ABQ94725.1| hypothetical protein PsycPRwf_1785 [Psychrobacter sp. PRwf-1]
Length = 274
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 21/107 (19%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L+D L + Q I S YR+ N A S+H+ A+D ++P
Sbjct: 161 RLYDQLKK-QGVIPATAEIR--STYRSPGLNA-----CAGGAGASKHMTNGAIDIWVPEY 212
Query: 166 SLRSLYKIAIRLKRG------------GVGYYS-KFLHIDVGRVRSW 199
+ YK ++ K G+G YS +H+D R+W
Sbjct: 213 ESQPWYKSGMQDKLCQFWSSQGEAYNFGLGLYSTGAIHLDTQGYRTW 259
>gi|295111837|emb|CBL28587.1| Peptidase M15. [Synergistetes bacterium SGP1]
Length = 129
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L L I++ + ++I SG R E N + + S H+ G+A D ++ G+
Sbjct: 27 RLLATLEAIRKAVG--KSVHIESGCRCAEKNADIGGK-----PDSGHLTGEAADIWVEGL 79
Query: 166 SLRSLYKIAIRLKR 179
S R L + L R
Sbjct: 80 SNRDLGVVIKDLHR 93
>gi|294672934|ref|YP_003573550.1| hypothetical protein PRU_0152 [Prevotella ruminicola 23]
gi|294474337|gb|ADE83726.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 150
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+L ++L +++ I I SGYR+ + N+ + A S H+ G AVD G
Sbjct: 43 KRLCEWLEVLREK--ASHPIIINSGYRSPQFNRKV-----GGAPTSNHITGCAVDIRTSG 95
>gi|294788485|ref|ZP_06753728.1| peptidase M15 superfamily [Simonsiella muelleri ATCC 29453]
gi|294483916|gb|EFG31600.1| peptidase M15 superfamily [Simonsiella muelleri ATCC 29453]
Length = 193
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLY-K 172
+ + + I I SG+R+Q N+ + A S H G A D G+S++ L
Sbjct: 68 LAEKYGRIIPIRITSGFRSQAVNRAVHG-----APTSAHRFGNAADIQAVGLSIKQLAYD 122
Query: 173 IAIRLKRG 180
I ++ G
Sbjct: 123 IFEFIQSG 130
>gi|303237939|ref|ZP_07324490.1| peptidase M15 [Prevotella disiens FB035-09AN]
gi|302481857|gb|EFL44901.1| peptidase M15 [Prevotella disiens FB035-09AN]
Length = 146
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
+ L ++ F I I SGYR +E NK + SQH+ G+A D ++ +
Sbjct: 59 EVLEPLRLRFGR---ILITSGYRCRELNKAV-----GGVFNSQHLRGEAADIFVSSTEMA 110
Query: 169 SLYKIAIRLKRGGVG---------YYSKFLHIDVGR 195
Y + VG + ++LH+ VGR
Sbjct: 111 MRYAEFLEKHTN-VGQILLEPLGRKHKRWLHVGVGR 145
>gi|327314189|ref|YP_004329626.1| peptidase M15 [Prevotella denticola F0289]
gi|326945736|gb|AEA21621.1| peptidase M15 [Prevotella denticola F0289]
Length = 166
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
L +++ + + SGYR + N+ + A +SQH+ G+A D ++ G+
Sbjct: 66 HVLEPLRRQVGR---VIVTSGYRCEALNRAVQG-----ALRSQHLKGEAADIHVTGL 114
>gi|325856560|ref|ZP_08172227.1| peptidase M15 [Prevotella denticola CRIS 18C-A]
gi|325483408|gb|EGC86382.1| peptidase M15 [Prevotella denticola CRIS 18C-A]
Length = 164
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR 168
L +++ + + SGYR + N+ + A +SQH+ G+A D ++ G+ +
Sbjct: 64 HVLEPLRRQVGR---VIVTSGYRCEALNRAVQG-----ALRSQHLKGEAADIHVTGLEMC 115
Query: 169 SLYKIAIR 176
Y +R
Sbjct: 116 RKYVAVLR 123
>gi|291336423|gb|ADD95979.1| hypothetical protein BAL199_18731 [uncultured organism
MedDCM-OCT-S04-C100]
Length = 137
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQH--VLGKAVDFYIPGVSL 167
L I++ F + I I SG+R+ E ++L ++ SQH A DF IPGV
Sbjct: 31 ILQPIREDFQL--PIKITSGFRSPELCEILGSKST-----SQHCANECAAADFEIPGVDN 83
Query: 168 RSL-YKIAIRLKRGGV--GYY------SKFLHIDVGRVRSWT 200
+ + I L + YY S ++H+ SW+
Sbjct: 84 KKVFRHIIENLPFDQIILEYYDESDINSGWIHV------SWS 119
>gi|114570222|ref|YP_756902.1| peptidase M15A [Maricaulis maris MCS10]
gi|114340684|gb|ABI65964.1| Peptidase M15A [Maricaulis maris MCS10]
Length = 146
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
+ ++++ I I SGYR NK + S H LG A DF + G+ +
Sbjct: 41 MEQVRRILG-DRAITITSGYRNPVVNKAV-----GGVSNSAHALGYAADFSVKGMEPVDV 94
Query: 171 YKIAIR 176
+
Sbjct: 95 ARALEA 100
>gi|282859773|ref|ZP_06268867.1| peptidase M15 [Prevotella bivia JCVIHMP010]
gi|282587393|gb|EFB92604.1| peptidase M15 [Prevotella bivia JCVIHMP010]
Length = 151
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
L ++Q + I SGYRT+ NK++ + +A SQH+ G+A D Y+
Sbjct: 55 VLEPLRQRVGR---VLITSGYRTEALNKLV----KGVA-NSQHLFGEAADIYVSD 101
>gi|218671536|ref|ZP_03521206.1| hypothetical protein RetlG_07683 [Rhizobium etli GR56]
Length = 86
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 14/58 (24%)
Query: 26 VTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQE 83
V+SP++ +P + R+LK+Y + TG KA++T+KR +++ +
Sbjct: 39 VSSPVFVSTPS--------------QAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPK 82
>gi|294672997|ref|YP_003573613.1| hypothetical protein PRU_0221 [Prevotella ruminicola 23]
gi|294473312|gb|ADE82701.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 140
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 105 PQLFDFLWEIQQYFS-----VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+L ++L +++ ++ + I I SGYR+ + N+ + A S H+ G AVD
Sbjct: 26 KRLCEWLEVLRKRYNDKYGEGEDPIRINSGYRSPQLNRKV-----GGAPTSNHLTGCAVD 80
Query: 160 FYIPGV 165
G+
Sbjct: 81 IRTNGM 86
>gi|299533279|ref|ZP_07046663.1| hypothetical protein CTS44_20848 [Comamonas testosteroni S44]
gi|298718809|gb|EFI59782.1| hypothetical protein CTS44_20848 [Comamonas testosteroni S44]
Length = 153
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 32/122 (26%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
+ L QL + Q L ++ + + SG+R + N+ +
Sbjct: 29 PDALQQL------HRTAQ----------MLERVRAHLGGH-PMTPTSGFRNRRVNEAV-- 69
Query: 142 RNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG--GVG--YY------SKFLHI 191
S H+ G A D +PG A+ G+G Y S+++H+
Sbjct: 70 ---GGTTTSDHMQGMAADVVVPGFGTPYEVAKALAPHVAALGIGQLIYEVSSKGSRWVHL 126
Query: 192 DV 193
Sbjct: 127 ST 128
>gi|294674689|ref|YP_003575305.1| hypothetical protein PRU_2032 [Prevotella ruminicola 23]
gi|294474033|gb|ADE83422.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 149
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 120 VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
+ I I SGYR+ + N+ + A S H+ G AVD G
Sbjct: 55 SSQPIIINSGYRSPQLNRKV-----GGAANSNHLTGCAVDIRTSG 94
>gi|300021897|ref|YP_003754508.1| peptidase M15A [Hyphomicrobium denitrificans ATCC 51888]
gi|299523718|gb|ADJ22187.1| Peptidase M15A [Hyphomicrobium denitrificans ATCC 51888]
Length = 147
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L I+ F + I+S R + S+H G+A+DF +PG +
Sbjct: 58 LLNRIRARFGN---VEIVSTCRP-------GAKIAGTGHPSRHASGQAIDFRVPGKKGQV 107
Query: 170 LYKIAIRLKRGGVGYYS--KFLHIDVGR 195
+ + GGV Y +H+D+G
Sbjct: 108 VSWLISNHHNGGVMTYRDMDHIHVDIGP 135
>gi|298374776|ref|ZP_06984734.1| peptidase M15 superfamily [Bacteroides sp. 3_1_19]
gi|298269144|gb|EFI10799.1| peptidase M15 superfamily [Bacteroides sp. 3_1_19]
Length = 141
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 17/92 (18%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE-----IQQYFSVPEYIYILS 128
+ ++ ++ D + ++ L E +++ + I I S
Sbjct: 3 YFNYQEFEDSATAR-----RDGIDNSLTPVARRMVTILVEMLLDPLRRVWGS--PIVISS 55
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
GYR E N ++ A+ S H+LG A D
Sbjct: 56 GYRCPELNILI-----GGAKHSHHLLGCAADL 82
>gi|255033754|ref|YP_003090199.1| endolysin gp23 [Burkholderia phage KS9]
gi|254832792|gb|ACT83034.1| endolysin gp23 [Burkholderia phage KS9]
Length = 149
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP-- 163
+ + L ++ + I SGYR N+ + S H+ G A DF P
Sbjct: 38 RTAEMLERVRDVLGGR-PVIITSGYRAAALNRAV-----GGVPTSAHLSGLAADFVCPKF 91
Query: 164 GVSLRSLYKIAIR 176
G L I+
Sbjct: 92 GAPLDICRAISAS 104
>gi|13186149|emb|CAC33460.1| hypothetical protein [Legionella pneumophila]
Length = 128
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 14/106 (13%)
Query: 92 LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
L H+ + +M P++ L +I+ I+I SGYR+ + + +
Sbjct: 14 LKCKHTGE-CNMHPEMMRILQDIRNELG--RPIFISSGYRSVKHPVEQEKDKPG-----E 65
Query: 152 HVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYSK------FLHI 191
H G AVD G + ++AI +G + K F+HI
Sbjct: 66 HTYGMAVDILCHGDRAIKIIELAINHGIKRIGVHQKGNANGRFVHI 111
>gi|60681913|ref|YP_212057.1| hypothetical protein BF2434 [Bacteroides fragilis NCTC 9343]
gi|265763963|ref|ZP_06092531.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|60493347|emb|CAH08132.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
gi|263256571|gb|EEZ27917.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 131
Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ L +++ + + I + SGYR+ N R+ A SQH LG+A D +
Sbjct: 38 NVLDPLREKYG--KPIRVSSGYRSAVLN-----RSVNGATSSQHRLGQAADITV 84
>gi|304383831|ref|ZP_07366289.1| peptidase M15 superfamily protein [Prevotella marshii DSM 16973]
gi|304335087|gb|EFM01359.1| peptidase M15 superfamily protein [Prevotella marshii DSM 16973]
Length = 150
Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 106 QLF--DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+L + L +++ F V I I SG+R +E NK + + SQH+ G+A D ++
Sbjct: 43 RLLCENVLEPLRRRFGV---IRITSGFRCKELNKAI-----GGDKYSQHLRGEAADIHVS 94
>gi|317504390|ref|ZP_07962374.1| peptidase M15 superfamily protein [Prevotella salivae DSM 15606]
gi|315664512|gb|EFV04195.1| peptidase M15 superfamily protein [Prevotella salivae DSM 15606]
Length = 147
Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
L ++ F I + S YR++ N+ L SQH+ G+A D ++
Sbjct: 47 HVLEPLRARFGR---IIVTSAYRSKAVNEALFGE-----PHSQHLKGEAADIHVS 93
>gi|218133205|ref|ZP_03462009.1| hypothetical protein BACPEC_01067 [Bacteroides pectinophilus ATCC
43243]
gi|217992078|gb|EEC58082.1| hypothetical protein BACPEC_01067 [Bacteroides pectinophilus ATCC
43243]
Length = 289
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 20/136 (14%)
Query: 70 AIVTFKRGSQYNQEGLSQLN-RLLY---DWHSK-QSIDMDPQLFDFLWEIQQYFSVPEYI 124
F S Y +G QL+ + + + +D L D L ++ +
Sbjct: 1 MKGAFMINSYYFSDGDIQLSPHFMLHEFQSRNGCDEVLIDDALIDLLEKVFRVSDASSA- 59
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-------IPGVSLRSLYKIAIRL 177
+ GYR + + + + H G A D IPG + IA L
Sbjct: 60 TVNDGYREPG--AYCRSIS-GLDKDA-HAYGMAADIVFYSDNDVIPG---SIICCIAQDL 112
Query: 178 KRGGVGYYSKFLHIDV 193
G+GY +H+D
Sbjct: 113 GCEGIGYMGNAVHLDT 128
>gi|261878798|ref|ZP_06005225.1| hypothetical protein HMPREF0645_0184 [Prevotella bergensis DSM
17361]
gi|270334615|gb|EFA45401.1| hypothetical protein HMPREF0645_0184 [Prevotella bergensis DSM
17361]
Length = 142
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ L +++ F + + SG+RT++ N+++ A SQH G+A D I
Sbjct: 46 LNILEPLRRQFG---PVIVSSGFRTRQVNRLV-----GGAPASQHTRGEAADIVI 92
>gi|262384756|ref|ZP_06077888.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293472|gb|EEY81408.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 138
Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 10/56 (17%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L + L + + +YI+SGYR++E N++L A SQH+ G+ VD Y
Sbjct: 46 RLLEPLRIYHR-----QPMYIMSGYRSEELNRLL-----GGAPSSQHMKGEVVDIY 91
>gi|224535511|ref|ZP_03676050.1| hypothetical protein BACCELL_00375 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522878|gb|EEF91983.1| hypothetical protein BACCELL_00375 [Bacteroides cellulosilyticus
DSM 14838]
Length = 132
Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 94 DWHSKQSIDMD-PQLFD-FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQ 151
D K+ ++ L D L +++ + + I + SG+R NK + S
Sbjct: 21 DNRCKKEHVVNMTALVDNVLDPLREAY--RKPITVNSGFRCPALNKAVKGSAT-----SD 73
Query: 152 HVLGKAVDFY 161
H+ G+A D
Sbjct: 74 HMTGRAADIT 83
>gi|260590682|ref|ZP_05856140.1| peptidase M15 family protein [Prevotella veroralis F0319]
gi|260537343|gb|EEX19960.1| peptidase M15 family protein [Prevotella veroralis F0319]
Length = 162
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+M + L ++Q + I SG+R ++ N + +A SQH+ G+A D
Sbjct: 56 VENMKALAMNVLEPLRQQVGR---VIITSGFRCKQLNDAV----GGVA-NSQHLRGEAAD 107
Query: 160 FYI 162
+I
Sbjct: 108 IHI 110
>gi|148545976|ref|YP_001266078.1| peptidase M15A [Pseudomonas putida F1]
gi|148510034|gb|ABQ76894.1| Peptidase M15A [Pseudomonas putida F1]
Length = 191
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 14/88 (15%)
Query: 119 SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG-VSLRSLYKIAIRL 177
+ ++S YR N A S H AVD +P L +
Sbjct: 96 GILRQFEVVSAYREPRLNA-----CAGGAANSAHTRAFAVDILLPAWADPNPLCRF--WQ 148
Query: 178 KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +H+D R+W
Sbjct: 149 QHGQAWNMGLGRYPSGRIHVDTAGYRTW 176
>gi|200003966|ref|YP_002221548.1| putative peptidase [Bacteroides phage B40-8]
gi|198209663|gb|ACH81946.1| putative peptidase [Bacteroides phage B40-8]
Length = 132
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
+ +D + D L I + I + SGYR E NK++ S HV G
Sbjct: 30 RNLTALVD-NVLDPLRAIYG-----KPITVNSGYRCPELNKVV-----GGVPNSHHVKGY 78
Query: 157 AVDFY 161
A D
Sbjct: 79 AADIT 83
>gi|150010381|ref|YP_001305124.1| hypothetical protein BDI_3818 [Parabacteroides distasonis ATCC
8503]
gi|149938805|gb|ABR45502.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 167
Score = 48.6 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 17/92 (18%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE-----IQQYFSVPEYIYILS 128
+ ++ ++ D + Q+ L E +++ + I I S
Sbjct: 29 YFNYQEFEDSATAR-----RDGIDNSLTPVAQQMVTILVEMLLDPLRRVWG--RPIVISS 81
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
GYR E N ++ A+ S H+LG A D
Sbjct: 82 GYRCPELNILI-----GGAKHSHHLLGCAADL 108
>gi|288800450|ref|ZP_06405908.1| peptidase M15 superfamily [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332663|gb|EFC71143.1| peptidase M15 superfamily [Prevotella sp. oral taxon 299 str.
F0039]
Length = 158
Score = 48.6 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
L ++ F I I SG+R++ N L + SQH G+A D Y+P
Sbjct: 52 HVLEPLRNRFGA---IRITSGFRSERLNSALCANSL-----SQHTFGEAADIYVPNR 100
>gi|171058942|ref|YP_001791291.1| peptidase M15A [Leptothrix cholodnii SP-6]
gi|170776387|gb|ACB34526.1| Peptidase M15A [Leptothrix cholodnii SP-6]
Length = 162
Score = 48.6 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
L ++ I +LSGYR+ NK++ + +S H+ G A DF P
Sbjct: 50 LETLRGALGC--PITVLSGYRSPAVNKLV-----GGSNQSAHLRGLAADFIAP 95
>gi|53713736|ref|YP_099728.1| hypothetical protein BF2445 [Bacteroides fragilis YCH46]
gi|52216601|dbj|BAD49194.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 131
Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ L +++ + + I + SGYR+ N R+ A SQH LG+A D +
Sbjct: 38 NVLDPLREKYG--KPIRVSSGYRSAILN-----RSVNGATSSQHRLGEAADITV 84
>gi|332970833|gb|EGK09812.1| peptidase M15A [Psychrobacter sp. 1501(2011)]
Length = 292
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 21/107 (19%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L+D L + Q I S YR+ N A S+H+ A+D ++P
Sbjct: 179 RLYDDLKK-QGVIPPTAEIR--STYRSPSLNA-----CAGGAGSSKHMTNGAIDIWVPEY 230
Query: 166 SLRSLYKIAIRLKRG------------GVGYYS-KFLHIDVGRVRSW 199
+ YK +++ + G+G YS +H+D R W
Sbjct: 231 EGQPWYKTSMQDRLCQFWSSQGQNYSFGLGIYSTGAIHLDTQGYRYW 277
>gi|83717617|ref|YP_439263.1| hypothetical protein BTH_II1066 [Burkholderia thailandensis E264]
gi|257142382|ref|ZP_05590644.1| hypothetical protein BthaA_24643 [Burkholderia thailandensis E264]
gi|83651442|gb|ABC35506.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 149
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP-- 163
+ + L ++ + I SGYR N+ + S H+ G A DF P
Sbjct: 38 RTAEMLERVRDVLGGR-PVRITSGYRAAALNRAV-----GGVPSSAHLSGLAADFVCPKI 91
Query: 164 GVSLRSLYKI 173
G L I
Sbjct: 92 GTPLDICRAI 101
>gi|302558357|ref|ZP_07310699.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces griseoflavus
Tu4000]
gi|302475975|gb|EFL39068.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces griseoflavus
Tu4000]
Length = 231
Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 84 GLSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKM 138
S+LN+ DW + L ++ I I SG+R+ N
Sbjct: 106 SYSELNKCNSDWSGGAVSAATAKSNALKTMWKLEAMRHALG-DVPINISSGFRSYACNNA 164
Query: 139 LSRRNRKIARKSQHVLGKAVDF 160
+ A S+H+ G A D
Sbjct: 165 V-----GGASNSRHLYGDAADL 181
>gi|170723648|ref|YP_001751336.1| hypothetical protein PputW619_4487 [Pseudomonas putida W619]
gi|169761651|gb|ACA74967.1| protein of unknown function DUF882 [Pseudomonas putida W619]
Length = 194
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 119 SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG-VSLRSLYKIAIRL 177
+ ++S YR N R A S H AVD +PG L +
Sbjct: 99 GILRQFEVVSAYRDSGLN-----RCAGGAVGSAHTRAFAVDILLPGWADPNPLCRF--WQ 151
Query: 178 KRG-----GVGYYS-KFLHIDVGRVRSW 199
+ G G+G Y +HID R+W
Sbjct: 152 QHGQAWGMGLGRYPTGRIHIDTAGYRTW 179
>gi|317485519|ref|ZP_07944396.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316923199|gb|EFV44408.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
Length = 102
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 18/96 (18%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
MD L L E + + + S +R + NK + +A S H G AVD
Sbjct: 1 MDAGLLRMLDEARALAGI--PFSLSSAFRCAKHNKAV----GGVA-DSAHTHGYAVDIKC 53
Query: 163 PG-----VSLRSLYKIA-IRLKRGGVGYYSKFLHID 192
+ +L + R++ G ++H+D
Sbjct: 54 TSSHYRFRIVSALLEAGFRRIEAG-----PTWVHVD 84
>gi|294788354|ref|ZP_06753597.1| peptidase M15 superfamily [Simonsiella muelleri ATCC 29453]
gi|294483785|gb|EFG31469.1| peptidase M15 superfamily [Simonsiella muelleri ATCC 29453]
Length = 169
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 105 PQLFDFLWEIQQYF----SVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++ ++L ++++ I I SG+R+ E NK + R S H G A D
Sbjct: 35 KRVAEWLEKLRELLAEKHGRVIPIRITSGFRSAEVNKRVGGR-----PNSAHRYGLATDI 89
Query: 161 YIPGVSLRSL 170
G+S++ L
Sbjct: 90 QAVGLSIKQL 99
>gi|307566006|ref|ZP_07628464.1| peptidase M15 [Prevotella amnii CRIS 21A-A]
gi|307345194|gb|EFN90573.1| peptidase M15 [Prevotella amnii CRIS 21A-A]
Length = 149
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L ++Q I I SGYR NK L+ + SQHV G+A D Y+
Sbjct: 53 VLEPLRQRVGR---IIITSGYR----NKELNALVNGV-PDSQHVFGEAADIYVSDA--AQ 102
Query: 170 LYKIAIRLKRGGVGYYSKF 188
K A + R Y+ F
Sbjct: 103 CAKYADIIMR-----YTDF 116
>gi|84387563|ref|ZP_00990581.1| hypothetical protein V12B01_11280 [Vibrio splendidus 12B01]
gi|84377611|gb|EAP94476.1| hypothetical protein V12B01_11280 [Vibrio splendidus 12B01]
Length = 208
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYI-LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
P + + L IQQY + I +SG RT N+ A +S+H+ A+D +P
Sbjct: 109 PNMINTLKYIQQYIEPEIGVVIPVSGERTNIYNQQ-----AGGALRSKHLEFCALDL-VP 162
Query: 164 G---------VSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
V L+ ++ + G+G YS F HID R W
Sbjct: 163 ANDITREDLHVKLKKIHAEFGQKNNVGLGLYSGVRF-HIDTCGFRQW 208
>gi|315498586|ref|YP_004087390.1| peptidase m15a [Asticcacaulis excentricus CB 48]
gi|315416598|gb|ADU13239.1| Peptidase M15A [Asticcacaulis excentricus CB 48]
Length = 361
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ +++ + I + SGYR N + ++ S H++G+AVDF
Sbjct: 258 MDKVRALLG--QPITVRSGYRGPALNAKI-----GGSKTSAHMIGRAVDF 300
>gi|117924985|ref|YP_865602.1| peptidase M15A [Magnetococcus sp. MC-1]
gi|117608741|gb|ABK44196.1| Peptidase M15A [Magnetococcus sp. MC-1]
Length = 117
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-IPGVS 166
L + +++ V +I SG+R N+ + + S H LG AVD I S
Sbjct: 24 LTQLDQAREWAGV--AFHINSGFRCAHHNRAVGGK-----PGSSHTLGLAVDLKAIESGS 76
Query: 167 LRSLYKIAIR--LKRGGVGYYSKFLHID 192
+ + ++ KR GV FLH+D
Sbjct: 77 RFHMIRGLLQAGFKRIGVDVKRGFLHVD 104
>gi|218676129|ref|YP_002394948.1| hypothetical protein VS_II0350 [Vibrio splendidus LGP32]
gi|218324397|emb|CAV25787.1| hypothetical protein VS_II0350 [Vibrio splendidus LGP32]
Length = 208
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYI-LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
P++ + L IQQY I I +SG RT NK A +S+H+ A+D +P
Sbjct: 109 PKMINTLKYIQQYIEPEIGIVIPVSGERTDIYNKQ-----AGGALRSKHLEFCALDL-VP 162
Query: 164 G---------VSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
V L+ ++ + G+G YS F HID R W
Sbjct: 163 ANDITRENLHVKLKKIHAEFGQKNNVGLGLYSGVRF-HIDTCGFRQW 208
>gi|83647077|ref|YP_435512.1| hypothetical protein HCH_04382 [Hahella chejuensis KCTC 2396]
gi|83635120|gb|ABC31087.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396]
Length = 309
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 35/109 (32%), Gaps = 38/109 (34%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS----------------- 166
I+SG+RT N + A S+H G A D +I
Sbjct: 206 FVIMSGFRTPYYNTSIRN-----AMYSRHQWGGAADVFIDENPKDGKMDDLNKDGKVDKN 260
Query: 167 -LRSLYKIAIRLK--------RGGVGYYS------KFLHIDV-GRVRSW 199
L ++ GG+G YS F+H+DV G W
Sbjct: 261 DAEYLAQLIETFAETTEYKSFIGGLGVYSANSYHGPFIHVDVRGATVRW 309
>gi|326562584|gb|EGE12896.1| Peptidase M15A [Moraxella catarrhalis 7169]
Length = 130
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
+ +++ V I I SGYR NK + + S H+ G A+DF P
Sbjct: 76 VNLYQPVREILGV--AIIISSGYRCPALNKAV-----GGSATSAHMSGFAIDFTAP 124
>gi|86144433|ref|ZP_01062765.1| hypothetical protein MED222_08488 [Vibrio sp. MED222]
gi|85837332|gb|EAQ55444.1| hypothetical protein MED222_08488 [Vibrio sp. MED222]
Length = 208
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYI-LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
P++ + L IQQY + I +SG RT NK A +S+H+ A+D +P
Sbjct: 109 PKMINTLKYIQQYIEPEIGVVIPVSGERTDIYNKQ-----AGGALRSKHLEFCALDL-VP 162
Query: 164 G---------VSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
V L+ ++ + G+G YS F HID R W
Sbjct: 163 ANDITRENLHVKLKKIHAEFGQKNNVGLGLYSGVRF-HIDTCGFRQW 208
>gi|71065490|ref|YP_264217.1| hypothetical protein Psyc_0930 [Psychrobacter arcticus 273-4]
gi|71038475|gb|AAZ18783.1| hypothetical protein Psyc_0930 [Psychrobacter arcticus 273-4]
Length = 309
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 21/107 (19%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
QL+ L Q I S YR+ N A S+HV A+D ++P
Sbjct: 198 QLYSQLKS-QGILPANSEIR--SVYRSPGLND-----CAGGASSSKHVTAGAIDIWVPEY 249
Query: 166 --SLRSLYKIAIRLK-----RG-----GVGYYS-KFLHIDVGRVRSW 199
S L ++ L +G G+G YS +H+D R W
Sbjct: 250 ESSPWQLSRMQDSLCEFWKYQGQSHNFGLGLYSTGAIHLDTDGYRKW 296
>gi|71909231|ref|YP_286818.1| hypothetical protein Daro_3619 [Dechloromonas aromatica RCB]
gi|71848852|gb|AAZ48348.1| hypothetical protein Daro_3619 [Dechloromonas aromatica RCB]
Length = 221
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 55/175 (31%), Gaps = 31/175 (17%)
Query: 3 KTEIFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIY 62
K IFR + + VA P +S +P ++ SS+S L R ++
Sbjct: 15 KPRIFRRKRSAPAPIARDVA------PDFSKTP--LEQISLSSLSPRALIAPNFRVYEL- 65
Query: 63 VVSTGSKAIVTFKRGSQYNQEG-LSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVP 121
T S + + + L L L I+ F
Sbjct: 66 ---TRSDLAARQGIDNSFASDAELRAAIHLAR---------------HVLQAIRDKFGSF 107
Query: 122 EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
S YR+Q + L + SQH G+A D I G++ L A
Sbjct: 108 SP---NSVYRSQSLERSLKNKPATWLSTSQHARGEACDIEIAGMATLELAAWARE 159
>gi|307318441|ref|ZP_07597875.1| Peptidase M15A [Sinorhizobium meliloti AK83]
gi|306895781|gb|EFN26533.1| Peptidase M15A [Sinorhizobium meliloti AK83]
Length = 50
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 162 IPGVSLRSLYKIAIRL-KRGGVGYY--SKFLHIDVGRVRSWT 200
+ GVS L + RGGVG Y + +HID+G R W
Sbjct: 1 MAGVSKWELANFLRNVPGRGGVGTYCHTNSVHIDIGPQRDWN 42
>gi|326570827|gb|EGE20851.1| peptidase M15A [Moraxella catarrhalis BC7]
Length = 250
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+++ +P I S YR E N+ A S+H+ A+D ++P +
Sbjct: 130 TLHLYQDLKSRGILPANTQIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLE 184
Query: 167 LRSLYKIAIR-------LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++S ++ L+ G G+G Y + +H+D R W
Sbjct: 185 IKSQALYELQNRLCQYWLEHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|326570087|gb|EGE20132.1| peptidase M15A [Moraxella catarrhalis BC8]
Length = 250
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+++ +P I S YR E N+ A S+H+ A+D ++P +
Sbjct: 130 TLHLYQDLKSRGILPANTQIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLE 184
Query: 167 LRSLYKIAIR-------LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++S ++ L+ G G+G Y + +H+D R W
Sbjct: 185 IKSQALYELQNRLCQYWLEHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|326562636|gb|EGE12940.1| peptidase M15A [Moraxella catarrhalis 46P47B1]
gi|326569608|gb|EGE19660.1| peptidase M15A [Moraxella catarrhalis BC1]
gi|326576098|gb|EGE26015.1| peptidase M15A [Moraxella catarrhalis O35E]
Length = 250
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+++ +P I S YR E N+ A S+H+ A+D ++P +
Sbjct: 130 TLHLYQDLKSRGILPANTQIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLE 184
Query: 167 LRSLYKIAIR-------LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++S ++ L+ G G+G Y + +H+D R W
Sbjct: 185 IKSQALYELQNRLCQYWLEHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|326561230|gb|EGE11594.1| peptidase M15A [Moraxella catarrhalis 103P14B1]
Length = 250
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+++ +P I S YR E N+ A S+H+ A+D ++P +
Sbjct: 130 TLHLYQDLKSRGILPANTQIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLE 184
Query: 167 LRSLYKIAIR-------LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++S ++ L+ G G+G Y + +H+D R W
Sbjct: 185 IKSQALYELQNRLCQYWLEHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|326567297|gb|EGE17414.1| peptidase M15A [Moraxella catarrhalis 12P80B1]
Length = 250
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+++ +P I S YR E N+ A S+H+ A+D ++P +
Sbjct: 130 TLHLYQDLKSRGILPANTQIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLE 184
Query: 167 LRSLYKIAIR-------LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++S ++ L+ G G+G Y + +H+D R W
Sbjct: 185 IKSQALYELQNRLCQYWLEHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|296113423|ref|YP_003627361.1| peptidase M15A [Moraxella catarrhalis RH4]
gi|295921117|gb|ADG61468.1| peptidase M15A [Moraxella catarrhalis RH4]
Length = 250
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVS 166
+++ +P I S YR E N+ A S+H+ A+D ++P +
Sbjct: 130 TLHLYQDLKSRGILPANTQIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLE 184
Query: 167 LRSLYKIAIR-------LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++S ++ L+ G G+G Y + +H+D R W
Sbjct: 185 IKSQALYELQNRLCQYWLEHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|148975726|ref|ZP_01812557.1| hypothetical protein VSWAT3_26461 [Vibrionales bacterium SWAT-3]
gi|145964799|gb|EDK30051.1| hypothetical protein VSWAT3_26461 [Vibrionales bacterium SWAT-3]
Length = 208
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYI-LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
P + + L IQQY + I +SG RT+ N+ A +S+H+ A+D +P
Sbjct: 109 PNMINTLKYIQQYIEPEIGVVIPVSGERTKIYNQQ-----AGGALRSKHLEFCALDL-VP 162
Query: 164 G---------VSLRSLYKIAIRLKRGGVGYYSK--FLHIDVGRVRSW 199
V L+ ++ + G+G YS F HID R W
Sbjct: 163 ANNITREQLHVKLKKIHAEYGQKNNVGLGLYSGVRF-HIDTCGFRQW 208
>gi|7480279|pir||T34747 muramoyl-pentapeptide carboxypeptidase - Streptomyces coelicolor
(fragment)
Length = 189
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 85 LSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LN+ DW + L ++ I I SG+R++ N +
Sbjct: 65 YAELNKCNSDWSGGAVSAATAKSNALKTMWKLEAMRHALG-DVPITISSGFRSRACNSAV 123
Query: 140 SRRNRKIARKSQHVLGKAVDFY 161
+ S+H+ G A D
Sbjct: 124 GGSST-----SRHLYGDAADLT 140
>gi|256785081|ref|ZP_05523512.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
Length = 222
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 85 LSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LN+ DW + L ++ I I SG+R++ N +
Sbjct: 98 YAELNKCNSDWSGGAVSAATAKSNALKTMWKLEAMRHALG-DVPITISSGFRSRACNSAV 156
Query: 140 SRRNRKIARKSQHVLGKAVDFY 161
+ S+H+ G A D
Sbjct: 157 GGSST-----SRHLYGDAADLT 173
>gi|289768974|ref|ZP_06528352.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
gi|289699173|gb|EFD66602.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
Length = 229
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 85 LSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LN+ DW + L ++ I I SG+R++ N +
Sbjct: 105 YAELNKCNSDWSGGAVSAATAKSNALKTMWKLEAMRHALG-DVPITISSGFRSRACNSAV 163
Query: 140 SRRNRKIARKSQHVLGKAVDFY 161
+ S+H+ G A D
Sbjct: 164 GGSST-----SRHLYGDAADLT 180
>gi|326576031|gb|EGE25954.1| peptidase M15A [Moraxella catarrhalis CO72]
Length = 250
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 18/88 (20%)
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR-------L 177
I S YR E N+ A S+H+ A+D ++P + ++S ++ L
Sbjct: 148 QIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLEIKSQALYELQNRLCQYWL 202
Query: 178 KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y + +H+D R W
Sbjct: 203 EHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|326559907|gb|EGE10307.1| peptidase M15A [Moraxella catarrhalis 7169]
Length = 250
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 18/88 (20%)
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR-------L 177
I S YR E N+ A S+H+ A+D ++P + ++S ++ L
Sbjct: 148 QIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLEIKSQALYELQNRLCQYWL 202
Query: 178 KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y + +H+D R W
Sbjct: 203 EHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|326573600|gb|EGE23560.1| peptidase M15A [Moraxella catarrhalis 101P30B1]
Length = 250
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 18/88 (20%)
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR-------L 177
I S YR E N+ A S+H+ A+D ++P + ++S ++ L
Sbjct: 148 QIRSVYRNPELNQ-----CAGGAAMSKHLTNSAIDIWVPDLEIKSQALYELQNRLCQYWL 202
Query: 178 KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y + +H+D R W
Sbjct: 203 EHGENQNFGLGLYATGAIHLDTQGFRKW 230
>gi|226953212|ref|ZP_03823676.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226836079|gb|EEH68462.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 237
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 25/96 (26%)
Query: 122 EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI----PGVSLRSLY------ 171
+ + S YR N R A S+HV A+DF I P S+ +
Sbjct: 128 DQFTVTSVYRNYALN-----RCAGGAGGSKHVFNAALDFRIGSENPD-SIEQIRIENTKK 181
Query: 172 -------KIAIRLKRGGVGYY-SKFLHIDVGRVRSW 199
+ L G+G Y S +HID R+W
Sbjct: 182 KLCEFWIEHGEALNM-GLGVYASGQIHIDTAGYRTW 216
>gi|32141264|ref|NP_733665.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces coelicolor
A3(2)]
gi|24430040|emb|CAD55354.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
coelicolor A3(2)]
Length = 244
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 85 LSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LN+ DW + L ++ I I SG+R++ N +
Sbjct: 120 YAELNKCNSDWSGGAVSAATAKSNALKTMWKLEAMRHALG-DVPITISSGFRSRACNSAV 178
Query: 140 SRRNRKIARKSQHVLGKAVDFY 161
+ S+H+ G A D
Sbjct: 179 GGSST-----SRHLYGDAADLT 195
>gi|254245333|ref|ZP_04938654.1| hypothetical protein BCPG_00029 [Burkholderia cenocepacia PC184]
gi|124870109|gb|EAY61825.1| hypothetical protein BCPG_00029 [Burkholderia cenocepacia PC184]
Length = 104
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 8/65 (12%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP--GVSLRSLY 171
++ + I SGYR N+ + S H+ G A DF P G L
Sbjct: 1 MRDVLGGR-PVIITSGYRAAALNRAV-----GGVPTSAHLSGLAADFVCPKFGAPLDICR 54
Query: 172 KIAIR 176
I+
Sbjct: 55 AISAS 59
>gi|226951442|ref|ZP_03821906.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226837809|gb|EEH70192.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 235
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAIR------ 176
+ S YR N+ A S+H+ A+DF I P Y +
Sbjct: 136 FEVTSVYRDLPLNE-----CAGGASSSRHLFNSAIDFRIGPQYPQPQDYAYIEQTKFKLC 190
Query: 177 ---LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++ G G+G Y S +HID R+W
Sbjct: 191 QFWIQHGQSLNLGIGLYRSGQIHIDTQGYRTW 222
>gi|294650964|ref|ZP_06728305.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823145|gb|EFF82007.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 235
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAIR------ 176
+ S YR N+ A S+H+ A+DF I P Y +
Sbjct: 136 FEVTSVYRDLPLNE-----CAGGASSSRHLFNSAIDFRIGPQYPQPQDYAYIEQTKFKLC 190
Query: 177 ---LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++ G G+G Y S +HID R+W
Sbjct: 191 QFWIQHGQSLNLGIGLYRSGQIHIDTQGYRTW 222
>gi|149925615|ref|ZP_01913879.1| hypothetical protein LMED105_05307 [Limnobacter sp. MED105]
gi|149825732|gb|EDM84940.1| hypothetical protein LMED105_05307 [Limnobacter sp. MED105]
Length = 156
Score = 44.8 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 13/67 (19%)
Query: 105 PQLFDFLWEIQQYFS--------VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
P+L D L + + + SG+R + N+ + SQH +G
Sbjct: 33 PELLDNLGRLSALLGDIHRSLNICTGALKVNSGFRAEALNEKV-----GGVPNSQHCVGL 87
Query: 157 AVDFYIP 163
A D P
Sbjct: 88 AADVVCP 94
>gi|317483877|ref|ZP_07942815.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316924834|gb|EFV45982.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
Length = 93
Score = 44.4 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 123 YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-IPGVSLRSLYKIAIRLKRGG 181
+ S YR + NK + S H G AVD + S + + +
Sbjct: 10 PFPLSSAYRCPKHNKAV-----GGVPTSAHTRGYAVDIRCVDSHSRFVMLQALLEAGFRR 64
Query: 182 VGYYSKFLHID 192
+ ++H+D
Sbjct: 65 IELAPTWIHVD 75
>gi|309389688|gb|ADO77568.1| Peptidase M15A [Halanaerobium praevalens DSM 2228]
Length = 318
Score = 44.4 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 36/110 (32%)
Query: 122 EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG----------------- 164
+ I+S YR+ NK + + S+H+ G A D YI
Sbjct: 213 DTFGIVSAYRSPYFNKKIGNKTAL----SRHIYGDAADIYIDNQVNSLMDDLNHDGQSDL 268
Query: 165 VSLRSLYKIAIRLK--------RGG------VGYYSKFLHIDVGRVR-SW 199
+ LY +A+ +GG G F+HID SW
Sbjct: 269 KDAKILYNLALAFDQKEKFKALQGGLSCYAANGVRGPFIHIDTRGFHVSW 318
>gi|257462297|ref|ZP_05626713.1| predicted endolysin [Fusobacterium sp. D12]
gi|317059966|ref|ZP_07924451.1| conserved hypothetical protein [Fusobacterium sp. D12]
gi|313685642|gb|EFS22477.1| conserved hypothetical protein [Fusobacterium sp. D12]
Length = 122
Score = 44.4 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 90 RLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK 149
LL + + P L + S P I G R+ E K L + +
Sbjct: 2 YLLNQRSRQNLQGVHPSLVKLMKT--AILSSPFPFMITEGLRSMERQKQLFQEGKTKTLD 59
Query: 150 SQHVLGKAVDFYI 162
S H+ G+AVD +
Sbjct: 60 SYHLKGRAVDIAV 72
>gi|260555573|ref|ZP_05827794.1| peptidase M15 family protein [Acinetobacter baumannii ATCC 19606]
gi|260412115|gb|EEX05412.1| peptidase M15 family protein [Acinetobacter baumannii ATCC 19606]
Length = 240
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P V Y
Sbjct: 141 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLC 195
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 196 QFWTQHGQSLNLGIGLYSSGQIHIDTQGYRTW 227
>gi|317483998|ref|ZP_07942934.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
gi|316924787|gb|EFV45937.1| peptidase M15 [Bilophila wadsworthia 3_1_6]
Length = 103
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 123 YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-IPGVSLRSLYKIAIRLKRGG 181
+ S YR + NK + S H G AVD + S + + +
Sbjct: 20 PFPLSSAYRCPKHNKAV-----GGVPTSAHTRGYAVDIRCVDSHSRFVMLQALLEAGFRR 74
Query: 182 VGYYSKFLHID 192
+ ++H+D
Sbjct: 75 IELAPTWIHVD 85
>gi|169632882|ref|YP_001706618.1| hypothetical protein ABSDF1114 [Acinetobacter baumannii SDF]
gi|169151674|emb|CAP00464.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
Length = 240
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P V Y
Sbjct: 141 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLC 195
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 196 QFWAQHGQSLNLGIGLYSSGQIHIDTQGYRTW 227
>gi|169796510|ref|YP_001714303.1| hypothetical protein ABAYE2480 [Acinetobacter baumannii AYE]
gi|332853958|ref|ZP_08435078.1| hypothetical protein HMPREF0021_02661 [Acinetobacter baumannii
6013150]
gi|332870214|ref|ZP_08439109.1| hypothetical protein HMPREF0020_02759 [Acinetobacter baumannii
6013113]
gi|332874291|ref|ZP_08442210.1| hypothetical protein HMPREF0022_01828 [Acinetobacter baumannii
6014059]
gi|169149437|emb|CAM87323.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|332728314|gb|EGJ59695.1| hypothetical protein HMPREF0021_02661 [Acinetobacter baumannii
6013150]
gi|332732381|gb|EGJ63638.1| hypothetical protein HMPREF0020_02759 [Acinetobacter baumannii
6013113]
gi|332737516|gb|EGJ68424.1| hypothetical protein HMPREF0022_01828 [Acinetobacter baumannii
6014059]
Length = 240
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P V Y
Sbjct: 141 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLC 195
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 196 QFWAQHGQSLNLGIGLYSSGQIHIDTQGYRTW 227
>gi|260549537|ref|ZP_05823755.1| peptidase M15 family protein [Acinetobacter sp. RUH2624]
gi|260407330|gb|EEX00805.1| peptidase M15 family protein [Acinetobacter sp. RUH2624]
Length = 239
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P V Y
Sbjct: 140 FEVTSVYRDLPLNQ-----CAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLC 194
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 195 QFWAQHGQSLNLGIGLYSSGQIHIDTQGYRTW 226
>gi|301311236|ref|ZP_07217164.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
gi|300830810|gb|EFK61452.1| peptidase M15 superfamily [Bacteroides sp. 20_3]
Length = 156
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
L ++ + I ILSGYR N+ ++R + SQH+ G+A D Y+
Sbjct: 47 LLEPLRLLYGA--PIAILSGYR----NEKVNRLAGGVVT-SQHLKGEAADCYVAD 94
>gi|298377521|ref|ZP_06987473.1| peptidase M15 superfamily [Bacteroides sp. 3_1_19]
gi|298265540|gb|EFI07201.1| peptidase M15 superfamily [Bacteroides sp. 3_1_19]
Length = 142
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
L ++ + I ILSGYR N+ ++R + SQH+ G+A D Y+
Sbjct: 47 LLEPLRLLYGA--PIAILSGYR----NEKVNRLAGGVVT-SQHLKGEAADCYVAD 94
>gi|262381095|ref|ZP_06074233.1| peptidase M15A [Bacteroides sp. 2_1_33B]
gi|262296272|gb|EEY84202.1| peptidase M15A [Bacteroides sp. 2_1_33B]
Length = 156
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
L ++ + I ILSGYR N+ ++R + SQH+ G+A D Y+
Sbjct: 47 LLEPLRLLYGA--PIAILSGYR----NEKVNRLAGGVVT-SQHLKGEAADCYVAD 94
>gi|256840396|ref|ZP_05545904.1| peptidase M15A [Parabacteroides sp. D13]
gi|256737668|gb|EEU50994.1| peptidase M15A [Parabacteroides sp. D13]
Length = 145
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
L ++ + I ILSGYR N+ ++R + SQH+ G+A D Y+
Sbjct: 50 LLEPLRLLYGA--PIAILSGYR----NEKVNRLAGGVVT-SQHLKGEAADCYVAD 97
>gi|150007102|ref|YP_001301845.1| hypothetical protein BDI_0445 [Parabacteroides distasonis ATCC
8503]
gi|149935526|gb|ABR42223.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 156
Score = 44.0 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
L ++ + I ILSGYR N+ ++R + SQH+ G+A D Y+
Sbjct: 47 LLEPLRLLYGA--PIAILSGYR----NEKVNRLAGGVVT-SQHLKGEAADCYVAD 94
>gi|285808612|gb|ADC36131.1| putative penicillin-resistance DD-carboxypeptidase [uncultured
bacterium 253]
Length = 284
Score = 43.6 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 11/109 (10%)
Query: 80 YNQEGLSQLNRLLY----DWHSKQSIDMDPQLFDFLWEIQQYFSVPEYI-YILSGYRTQE 134
Y+ +L + + + + + + E I+S +R++E
Sbjct: 145 YDPTRAEELRWVERRTYQAYKKMVAAAVADRSLGLAHGAHGELATGEKFLKIVSAFRSRE 204
Query: 135 TNKMLSRRN-----RKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLK 178
+ L R + +A S H G+A+D Y+ G + +L +L+
Sbjct: 205 YQEKLRRESPNSGSAGLAVNSPHFTGRALDLYVGGEPVDTL-DANRKLQ 252
>gi|126641294|ref|YP_001084278.1| hypothetical protein A1S_1248 [Acinetobacter baumannii ATCC 17978]
gi|184157557|ref|YP_001845896.1| hypothetical protein ACICU_01237 [Acinetobacter baumannii ACICU]
gi|213156377|ref|YP_002318797.1| hypothetical protein AB57_1421 [Acinetobacter baumannii AB0057]
gi|215483973|ref|YP_002326198.1| hypothetical protein ABBFA_002296 [Acinetobacter baumannii
AB307-0294]
gi|239503727|ref|ZP_04663037.1| hypothetical protein AbauAB_15567 [Acinetobacter baumannii AB900]
gi|126387178|gb|ABO11676.1| hypothetical protein A1S_1248 [Acinetobacter baumannii ATCC 17978]
gi|183209151|gb|ACC56549.1| hypothetical protein ACICU_01237 [Acinetobacter baumannii ACICU]
gi|213055537|gb|ACJ40439.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
gi|213986418|gb|ACJ56717.1| hypothetical protein ABBFA_002296 [Acinetobacter baumannii
AB307-0294]
gi|322507871|gb|ADX03325.1| putative exported protein [Acinetobacter baumannii 1656-2]
gi|323517468|gb|ADX91849.1| hypothetical protein ABTW07_1420 [Acinetobacter baumannii
TCDC-AB0715]
Length = 223
Score = 43.6 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P V Y
Sbjct: 124 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLC 178
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 179 QFWAQHGQSLNLGIGLYSSGQIHIDTQGYRTW 210
>gi|31790352|gb|AAP58609.1| putative penicillin-resistance DD-carboxypeptidase [uncultured
Acidobacteria bacterium]
Length = 281
Score = 43.6 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 122 EYIYILSGYRTQETNKMLSRRN-----RKIARKSQHVLGKAVDFYIPGVSLR 168
+Y+ I+S +R++E + L R + +A S H G+A+D Y+ G +
Sbjct: 189 KYLKIISAFRSREYQEKLRRESPNAGSAGLAVNSPHFTGRALDLYVGGDPVD 240
>gi|260553363|ref|ZP_05825977.1| peptidase M15 family protein [Acinetobacter sp. RUH2624]
gi|260405200|gb|EEW98698.1| peptidase M15 family protein [Acinetobacter sp. RUH2624]
Length = 226
Score = 43.6 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 40/134 (29%), Gaps = 34/134 (25%)
Query: 93 YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
DW + + P+ L + V + S YR N R
Sbjct: 88 RDWQKCGVEPYAVPPREIWSNIVPTLSILKALVDD-GVINDFEVTSAYRALSLN-----R 141
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKI----------------AIRLKRGGVGYY- 185
A S+HV A+DF I L + L G+G Y
Sbjct: 142 CAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQFWETKGQALNM-GLGVYA 200
Query: 186 SKFLHIDVGRVRSW 199
S +HID RSW
Sbjct: 201 SGQIHIDSQGFRSW 214
>gi|169634864|ref|YP_001708600.1| hypothetical protein ABSDF3591 [Acinetobacter baumannii SDF]
gi|169153656|emb|CAP02850.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
Length = 227
Score = 43.6 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDD-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIEPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
G+G Y S +HID R+W
Sbjct: 184 WATKGQAFNM-GLGVYASGQIHIDSQGFRAW 213
>gi|225023703|ref|ZP_03712895.1| hypothetical protein EIKCOROL_00567 [Eikenella corrodens ATCC
23834]
gi|224943585|gb|EEG24794.1| hypothetical protein EIKCOROL_00567 [Eikenella corrodens ATCC
23834]
Length = 169
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L + + + I++LS +R+ N + ++ S H G A D G+
Sbjct: 45 RLEKIRAWLGKKYGREVSIHVLSCFRSAAVNGAV-----GGSKTSAHRFGSAADIDAAGI 99
Query: 166 SLRSLYKIAIRLKRGG 181
S L + I+++ G
Sbjct: 100 SNLQLARDIIQMRDDG 115
>gi|221369882|ref|YP_002520978.1| hypothetical protein RSKD131_4045 [Rhodobacter sphaeroides KD131]
gi|221162934|gb|ACM03905.1| Hypothetical Protein RSKD131_4045 [Rhodobacter sphaeroides KD131]
Length = 136
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 153 VLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGYY--SKFLHIDVGRVRSW 199
+ G A D + + A + G G Y S F+HID+G RSW
Sbjct: 1 MQGTAFDIAMSNHDPAAFEAAARAVGFLGFGTYPRSGFMHIDLGPARSW 49
>gi|260878713|ref|ZP_05891068.1| peptidase M15A [Vibrio parahaemolyticus AN-5034]
gi|308091057|gb|EFO40752.1| peptidase M15A [Vibrio parahaemolyticus AN-5034]
Length = 121
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV 165
+L + + ++ + VP + S YR + N + R+ K H A+D +
Sbjct: 29 ELMNIVQFMRDFLKVPLP--VSSAYRCE--NHPIERKKVKAG---WHNKA-AIDLKVSRE 80
Query: 166 SLRSLYKIAIRLKRGGVGYYSK----FLHIDVGRVRS-WT 200
+ ++A++L G+G K F+H+D+ R W+
Sbjct: 81 VAHKVLELAMKLGIKGIGVNQKGDHRFIHLDMRPNRMVWS 120
>gi|332532858|ref|ZP_08408731.1| hypothetical protein PH505_aj00510 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037704|gb|EGI74155.1| hypothetical protein PH505_aj00510 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 333
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 106 QLFDFLWEIQQYF---SVP-EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L L +I++ +P + ++SGYRT N ++ + S+HV G A D +
Sbjct: 206 KLLLKLEKIRKELILEGIPVSNMVVMSGYRTPYYN-----KSIGNVKLSRHVFGDAADIF 260
Query: 162 IP 163
I
Sbjct: 261 ID 262
>gi|302347060|ref|YP_003815358.1| peptidase M15 [Prevotella melaninogenica ATCC 25845]
gi|302150956|gb|ADK97217.1| peptidase M15 [Prevotella melaninogenica ATCC 25845]
Length = 161
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
YR + N+ + A SQH+ G+A D ++ G+ + Y +
Sbjct: 82 YRCEAVNRAVHG-----AEHSQHLRGEAADIHVTGLEMCRKYAAILS 123
>gi|297620613|ref|YP_003708750.1| hypothetical protein wcw_0372 [Waddlia chondrophila WSU 86-1044]
gi|297375914|gb|ADI37744.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
Length = 280
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L + IQ + + I SG+R E N+ + + S+H +G V FY+ G
Sbjct: 128 PILISLMNHIQAETG--KKVVITSGHRCPEHNQYVDSSKSNL--YSKHQVGAEVSFYVKG 183
Query: 165 V--SLRSLYKIAIRLKRGGVGYYSKFLHID 192
+ S + ++ + YY H D
Sbjct: 184 LEESPERVIQLLMD-------YYKN--HQD 204
>gi|288801962|ref|ZP_06407403.1| peptidase M15 superfamily [Prevotella melaninogenica D18]
gi|288335397|gb|EFC73831.1| peptidase M15 superfamily [Prevotella melaninogenica D18]
Length = 161
Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 130 YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIR 176
YR + N+ + A SQH+ G+A D ++ G+ + Y +
Sbjct: 82 YRCEAVNRAVHG-----AEHSQHLRGEAADIHVTGLEMCRKYAAILA 123
>gi|239835209|ref|ZP_04683535.1| Hypothetical protein OINT_3000044 [Ochrobactrum intermedium LMG
3301]
gi|239821185|gb|EEQ92756.1| Hypothetical protein OINT_3000044 [Ochrobactrum intermedium LMG
3301]
Length = 340
Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 95 WHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
H Q ++P L + + I SGYR+ + + ++ N +H
Sbjct: 271 VHQGQEK-INPAFAAILTNVSGDIGRG--LVINSGYRSPQHSVEKAKGNGGG----EHTH 323
Query: 155 GKAVDFYIPG 164
G AVD + G
Sbjct: 324 GTAVDISMKG 333
>gi|237738239|ref|ZP_04568720.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229420119|gb|EEO35166.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 142
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
+ I++ V + + S +R +E NK + ++ S H G AVD + ++ + +
Sbjct: 44 MDYIRELLGV--PLIVTSWFRCEELNKAVDG-----SKTSAHRFGLAVDVHSKKMASKEI 96
Query: 171 YKIAIRLKRGG------VGYYS--KFLH 190
Y+ A+ LK+ G + YY F+H
Sbjct: 97 YEKALELKQEGKIQFDQLIYYPRQNFVH 124
>gi|262373027|ref|ZP_06066306.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313052|gb|EEY94137.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 234
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAIR------ 176
+ S YR N+ A S+H+ A+DF I P Y +
Sbjct: 135 FEVTSVYRDLPLNQ-----CAGGASSSKHLFNSAIDFRIGPEYPQPQDYAYIEQTKFKLC 189
Query: 177 ---LKRG-----GVGYY-SKFLHIDVGRVRSW 199
++ G G+G Y S +H+D R+W
Sbjct: 190 QFWIQHGQSLDLGIGLYSSGQIHLDTQGYRTW 221
>gi|323519850|gb|ADX94231.1| hypothetical protein ABTW07_3814 [Acinetobacter baumannii
TCDC-AB0715]
Length = 227
Score = 42.9 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 49/151 (32%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDE-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
L G+G Y S +HID R+W
Sbjct: 184 WATKGQALNM-GLGVYASGQIHIDSQGFRAW 213
>gi|321450820|gb|EFX62689.1| hypothetical protein DAPPUDRAFT_336587 [Daphnia pulex]
Length = 1375
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 19/105 (18%)
Query: 107 LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK-------IARKSQHVLGKAVD 159
L + I+ + I R N + + K + S H GKAVD
Sbjct: 1266 LAKKMDAIRIML--NRPVTISCWIRPGSVNAPGTEYHGKDYNLFIKGTKNSAHKEGKAVD 1323
Query: 160 FYIPGVSLRSLY--------KIAIRLKRGGVGYYSKFLHIDVGRV 196
FY G+S + + +R ++ VG S ++H+D
Sbjct: 1324 FYSTGISCDEIRTMLLPVLETMGLRCEQLPVG--SPWVHVDSRPA 1366
>gi|117164603|emb|CAJ88149.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
ambofaciens ATCC 23877]
Length = 244
Score = 42.5 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 11/81 (13%)
Query: 85 LSQLNRLLYDWHSKQS-----IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKML 139
++LN+ DW + L ++ + I SG+R++ N +
Sbjct: 120 YAELNKCNSDWSGGAVSAATAKSNALKTMWKLEAMRHALG-DVPLTISSGFRSRACNNAV 178
Query: 140 SRRNRKIARKSQHVLGKAVDF 160
+ S+H+ G A D
Sbjct: 179 -----GGSATSRHLYGDAADL 194
>gi|117530239|ref|YP_851082.1| hypothetical protein MaLMM01_gp068 [Microcystis phage Ma-LMM01]
gi|117165851|dbj|BAF36159.1| hypothetical protein [Microcystis phage Ma-LMM01]
Length = 213
Score = 42.5 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+L L +I++ + + I + S YR N+ + SQH+ G AVD
Sbjct: 112 RLAKELDKIREEWG--KPIIVTSWYRPLAINRAV-----GGVDNSQHIEGLAVDI 159
>gi|330466869|ref|YP_004404612.1| putative muramoyl-pentapeptide carboxypeptidase [Verrucosispora
maris AB-18-032]
gi|328809840|gb|AEB44012.1| putative muramoyl-pentapeptide carboxypeptidase [Verrucosispora
maris AB-18-032]
Length = 249
Score = 42.5 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L +++ +Y+ SG+R+ N + A S+H+ G +D + S
Sbjct: 153 MWKLQAMRRAMG-NAPLYLSSGFRSYSCNSAV-----GGASNSRHLYGDGIDL-VGSHSF 205
Query: 168 RSLYKIAIRLKRG-----GVGY--YSKFLHIDVGRVRSWT 200
+L + A G G GY ++ H+ RSW+
Sbjct: 206 CALAQQAR--NHGFTNILGPGYPGHNDHTHLGNTPSRSWS 243
>gi|282856601|ref|ZP_06265872.1| peptidase M15A [Pyramidobacter piscolens W5455]
gi|282585592|gb|EFB90889.1| peptidase M15A [Pyramidobacter piscolens W5455]
Length = 158
Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 22/126 (17%)
Query: 81 NQEGLSQLNRLLY-----DWHSKQSID--------MDPQLFDFLWEIQQYFSVPEYIYIL 127
N + +++ +R+L D +S+ MD L E+Q + + +
Sbjct: 26 NAKAITEASRILPALAELDSRQMESLRCRCCGAAGMDAVFLKKLAELQVRW--KKRLTFT 83
Query: 128 SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV--GYY 185
SG R N + +S+H+ G+AVD + +A RL V
Sbjct: 84 SGRRCVRHNAHV-----GGVPRSRHLTGQAVDVAVGSHEQERFCALARRLGFRSVLPDPR 138
Query: 186 SKFLHI 191
++H+
Sbjct: 139 RNYVHL 144
>gi|332672335|ref|YP_004421579.1| putative peptidase [Campylobacter phage NCTC12673]
gi|327493512|gb|AEA86371.1| putative peptidase [Campylobacter phage NCTC12673]
Length = 887
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
Query: 100 SIDMDPQLFDFLWEI-QQYFSV-PEYIYILSGYRTQE-----TNKMLSRRNRKIAR--KS 150
+D L L + YF+ + + SGYR+ E N ++ + R S
Sbjct: 457 IGKLDSNLLYNLNLMAYDYFNTYKKQFTVTSGYRSIELQQKLYNNFINGKGSPANRPGYS 516
Query: 151 QHVLGKAVDF 160
H G AVD
Sbjct: 517 LHEYGMAVDI 526
>gi|299768316|ref|YP_003730342.1| Peptidase M15 family protein [Acinetobacter sp. DR1]
gi|298698404|gb|ADI88969.1| Peptidase M15 family protein [Acinetobacter sp. DR1]
Length = 225
Score = 42.1 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 46/133 (34%), Gaps = 32/133 (24%)
Query: 93 YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
DW + + P+ L + V + S YR N R
Sbjct: 87 RDWQKCGVEPYAVPPREIWSNIVPTLSILKALVDD-GVINDFEVTSAYRALSLN-----R 140
Query: 143 NRKIARKSQHVLGKAVDFYI-----PGVSLRSLYKIAIRLKR-----G-----GVGYY-S 186
A S+HV A+DF I + ++ + I+L + G G+G Y S
Sbjct: 141 CAGGADASRHVFNAALDFRIGPEQPTDLDQFNIQQTKIKLCQFWETKGQVLNMGLGVYAS 200
Query: 187 KFLHIDVGRVRSW 199
+HID RSW
Sbjct: 201 GQIHIDSQGFRSW 213
>gi|260557829|ref|ZP_05830042.1| peptidase M15 family protein [Acinetobacter baumannii ATCC 19606]
gi|193078730|gb|ABO13801.2| hypothetical protein A1S_3412 [Acinetobacter baumannii ATCC 17978]
gi|260408620|gb|EEX01925.1| peptidase M15 family protein [Acinetobacter baumannii ATCC 19606]
Length = 227
Score = 42.1 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDE-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
G+G Y S +HID R+W
Sbjct: 184 WATKGQAFNM-GLGVYASGQIHIDSQGFRAW 213
>gi|119471876|ref|ZP_01614184.1| hypothetical protein ATW7_04559 [Alteromonadales bacterium TW-7]
gi|119445249|gb|EAW26539.1| hypothetical protein ATW7_04559 [Alteromonadales bacterium TW-7]
Length = 332
Score = 42.1 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 106 QLFDFLWEIQQYF---SVP-EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY 161
+L L I++ +P + ++SGYRT NK + + S+HV G A D +
Sbjct: 205 KLLLKLEIIRKELILEGIPVSNMVVMSGYRTPYYNKAI-----GNVKLSRHVFGDAADIF 259
Query: 162 IP 163
I
Sbjct: 260 ID 261
>gi|237735434|ref|ZP_04565915.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229381179|gb|EEO31270.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 288
Score = 42.1 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 25/118 (21%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQS--------IDMDPQLFDFLWEIQQYFSVPEY-I 124
+K + + L +N D ++ S M ++D +++ + +
Sbjct: 108 YKLDDNFTPDDLIYIN----DTYANTSDPAYKYRKHQMRKVVYDDFIALKEACKTKGFNL 163
Query: 125 YILSGYRT-----QETNKMLSRRNRKIAR-------KSQHVLGKAVDFYIPGVSLRSL 170
Y++SGYR+ + N M++ + A S+H G A D + S +
Sbjct: 164 YVVSGYRSTTWQTEIYNHMVNTYSVAKADQTCSRPGHSEHTTGLACDIALDNYSFEDV 221
>gi|167754834|ref|ZP_02426961.1| hypothetical protein CLORAM_00338 [Clostridium ramosum DSM 1402]
gi|167704884|gb|EDS19463.1| hypothetical protein CLORAM_00338 [Clostridium ramosum DSM 1402]
Length = 288
Score = 42.1 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 25/118 (21%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQS--------IDMDPQLFDFLWEIQQYFSVPEY-I 124
+K + + L +N D ++ S M ++D +++ + +
Sbjct: 108 YKLDDNFTPDDLIYIN----DTYANTSDPAYKYRKHQMRKVVYDDFIALKEACKTKGFNL 163
Query: 125 YILSGYRT-----QETNKMLSRRNRKIAR-------KSQHVLGKAVDFYIPGVSLRSL 170
Y++SGYR+ + N M++ + A S+H G A D + S +
Sbjct: 164 YVVSGYRSTTWQTEIYNHMVNTYSVAKADQTCSRPGHSEHTTGLACDIALDNYSFEDV 221
>gi|126643419|ref|YP_001086403.1| hypothetical protein A1S_3412 [Acinetobacter baumannii ATCC 17978]
Length = 190
Score = 42.1 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 33 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDE-GVINDFE 91
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 92 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 146
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
G+G Y S +HID R+W
Sbjct: 147 WATKGQAFNM-GLGVYASGQIHIDSQGFRAW 176
>gi|332873360|ref|ZP_08441314.1| peptidase M15 [Acinetobacter baumannii 6014059]
gi|332738423|gb|EGJ69296.1| peptidase M15 [Acinetobacter baumannii 6014059]
Length = 227
Score = 41.7 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDD-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
G+G Y S +HID R+W
Sbjct: 184 WATKGQAFNM-GLGVYASGQIHIDSQGFRAW 213
>gi|239502798|ref|ZP_04662108.1| Peptidase M15 family protein [Acinetobacter baumannii AB900]
Length = 227
Score = 41.7 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDD-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
G+G Y S +HID R+W
Sbjct: 184 WATKGQAFNM-GLGVYASGQIHIDSQGFRAW 213
>gi|169794272|ref|YP_001712065.1| hypothetical protein ABAYE0070 [Acinetobacter baumannii AYE]
gi|184159925|ref|YP_001848264.1| hypothetical protein ACICU_03608 [Acinetobacter baumannii ACICU]
gi|213159154|ref|YP_002321152.1| peptidase M15 family [Acinetobacter baumannii AB0057]
gi|215481830|ref|YP_002324012.1| Peptidase M15 family protein [Acinetobacter baumannii AB307-0294]
gi|332850351|ref|ZP_08432685.1| peptidase M15 [Acinetobacter baumannii 6013150]
gi|332871542|ref|ZP_08440036.1| peptidase M15 [Acinetobacter baumannii 6013113]
gi|169147199|emb|CAM85058.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|183211519|gb|ACC58917.1| hypothetical protein ACICU_03608 [Acinetobacter baumannii ACICU]
gi|213058314|gb|ACJ43216.1| peptidase M15 family [Acinetobacter baumannii AB0057]
gi|213985855|gb|ACJ56154.1| Peptidase M15 family protein [Acinetobacter baumannii AB307-0294]
gi|322509841|gb|ADX05295.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
gi|332730809|gb|EGJ62119.1| peptidase M15 [Acinetobacter baumannii 6013150]
gi|332731396|gb|EGJ62688.1| peptidase M15 [Acinetobacter baumannii 6013113]
Length = 227
Score = 41.7 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDD-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
G+G Y S +HID R+W
Sbjct: 184 WATKGQAFNM-GLGVYASGQIHIDSQGFRAW 213
>gi|291334447|gb|ADD94102.1| hypothetical protein Daro_3619 [uncultured phage
MedDCM-OCT-S04-C1035]
gi|291334499|gb|ADD94153.1| hypothetical protein Daro_3619 [uncultured phage
MedDCM-OCT-S04-C1161]
gi|291334555|gb|ADD94206.1| hypothetical protein Daro_3619 [uncultured phage
MedDCM-OCT-S04-C1227]
gi|291334677|gb|ADD94323.1| hypothetical protein Daro_3619 [uncultured phage
MedDCM-OCT-S04-C890]
gi|291336597|gb|ADD96145.1| hypothetical protein Daro_3619 [uncultured organism
MedDCM-OCT-S04-C777]
Length = 256
Score = 41.7 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 8/62 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L ++ F + + SG+R+ + + + SQH +AVDF + G
Sbjct: 141 LLQPVRDKFG---PVTVTSGFRSVDLCVKI-----GSSINSQHAKAEAVDFEVSGTDNAD 192
Query: 170 LY 171
L
Sbjct: 193 LA 194
>gi|262376220|ref|ZP_06069450.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262308821|gb|EEY89954.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 239
Score = 41.7 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 140 FEVTSVYRDLPLNQ-----CAGGANSSRHLYNSAIDFRIGPEYPQAQDYSYIENTKFKLC 194
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
++ G G+G Y S +HID R+W
Sbjct: 195 QFWVQHGQSLNMGLGMYASGQIHIDTQGYRTW 226
>gi|253581760|ref|ZP_04858984.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251836109|gb|EES64646.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 140
Score = 41.7 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSL 170
+ I++Y + + +LS +R++E N + ++ S H +G AVD Y ++ + +
Sbjct: 42 MDLIREYLGI--PLIVLSWFRSEELNIAVKG-----SKTSAHRIGMAVDVYSNKMTSKDI 94
Query: 171 YKIAIRLKRGGVG------YYS--KFLHI------DVGRVRSW 199
Y I + GV YY F+HI D R + W
Sbjct: 95 YNKLIGAQAEGVLQFDQLIYYPKQNFVHIGFKLNKDQERKKYW 137
>gi|325121598|gb|ADY81121.1| hypothetical protein BDGL_000535 [Acinetobacter calcoaceticus
PHEA-2]
Length = 223
Score = 41.7 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 124 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEFPQAQDYAFIENTKFKLC 178
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 179 QFWAQHGQSLNMGIGLYSSGQIHIDTQGYRTW 210
>gi|293608590|ref|ZP_06690893.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829163|gb|EFF87525.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 240
Score = 41.7 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 141 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEFPQAQDYAFIENTKFKLC 195
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 196 QFWAQHGQSLNMGIGLYSSGQIHIDTQGYRTW 227
>gi|262278521|ref|ZP_06056306.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258872|gb|EEY77605.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 240
Score = 41.7 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 141 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEFPRAQDYAFIENTKFKLC 195
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 196 QFWAQHGQSLNMGIGLYSSGQIHIDTQGYRTW 227
>gi|261392736|emb|CAX50311.1| conserved hypothetical protein [Neisseria meningitidis 8013]
Length = 157
Score = 41.7 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I + S +R+++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVTSCFRSEQVNKLV-----GGSPTSAHRHGLAADCDASGMTSPA 93
Query: 170 LYKIAIRLKRGG 181
K+ I+++ G
Sbjct: 94 FAKLLIKMRDEG 105
>gi|299770828|ref|YP_003732854.1| hypothetical protein AOLE_12970 [Acinetobacter sp. DR1]
gi|298700916|gb|ADI91481.1| hypothetical protein AOLE_12970 [Acinetobacter sp. DR1]
Length = 223
Score = 41.7 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 124 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEFPQAQDYAFIENTKFKLC 178
Query: 176 --RLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 179 QFWAQHGQSLNMGIGLYSSGQIHIDTQGYRTW 210
>gi|50084666|ref|YP_046176.1| hypothetical protein ACIAD1496 [Acinetobacter sp. ADP1]
gi|15217086|gb|AAK92497.1|AF400582_6 unknown [Acinetobacter sp. ADP1]
gi|49530642|emb|CAG68354.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 240
Score = 41.7 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAIRL----- 177
+ S YR N+ A S+H+ A+DF I P + Y
Sbjct: 141 FEVTSVYRDLPLNQ-----CAGGANSSRHLFNSAIDFRIGPEIPQPQDYAFIENTKFKLC 195
Query: 178 ----KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 196 QFWNQHGQSLNMGLGLYSSGQIHIDTQGYRTW 227
>gi|260792388|ref|XP_002591197.1| hypothetical protein BRAFLDRAFT_105399 [Branchiostoma floridae]
gi|229276400|gb|EEN47208.1| hypothetical protein BRAFLDRAFT_105399 [Branchiostoma floridae]
Length = 707
Score = 41.3 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 137 KMLSRRNRKIARKSQHVLGKA-VD-FYIPGVSLRSLYKIAIRLKRGGVGYYSK 187
L + + + HV+G+A D F++PG R+L ++ L+ GVG Y +
Sbjct: 79 AWLKQSDEDVDHNPLHVVGQAFADLFHLPG--PRALRNLSKHLRAIGVGIYDQ 129
>gi|257455448|ref|ZP_05620683.1| peptidase M15A [Enhydrobacter aerosaccus SK60]
gi|257447410|gb|EEV22418.1| peptidase M15A [Enhydrobacter aerosaccus SK60]
Length = 312
Score = 41.3 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 22/90 (24%)
Query: 125 YILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRG---- 180
I S YR N A +S+H+ A+D +IP + G
Sbjct: 217 VIRSVYRNPALND-----CAGGAGESKHMTNGAIDIWIP--ENEANKWAIESTFDGLCQF 269
Query: 181 ----------GVGYYS-KFLHIDVGRVRSW 199
G+G Y +H+D R W
Sbjct: 270 WQSNGQSYNFGLGLYPTGSVHLDTQGFRKW 299
>gi|119897592|ref|YP_932805.1| hypothetical protein azo1301 [Azoarcus sp. BH72]
gi|119670005|emb|CAL93918.1| hypothetical membrane protein [Azoarcus sp. BH72]
Length = 223
Score = 40.9 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 17/96 (17%)
Query: 93 YDWHSKQSIDMDPQLFDFLWEIQQYF-SVPEYIYILSGYRTQETNKMLSRRNRKI----A 147
DW +D + + L + + ++ ++ GYR+ E L K+ A
Sbjct: 99 RDW-----AKLDARFRERLQRVVERLRGRGQHFVLVEGYRSPERQDQLFALPTKVTAARA 153
Query: 148 RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVG 183
+S+H G A D L + A + G+G
Sbjct: 154 WESRHQYGLAAD-------LAPVRDGAASFETDGLG 182
>gi|226227860|ref|YP_002761966.1| hypothetical protein GAU_2454 [Gemmatimonas aurantiaca T-27]
gi|226091051|dbj|BAH39496.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 332
Score = 40.9 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 45/145 (31%)
Query: 93 YDWHSKQSIDM-------DPQLFDFLWEIQQYFSVPE-------YIYILSGYRTQETNKM 138
D+ + M DP++ D + + + + + + SG+RT N
Sbjct: 193 RDFVTHDRQTMWPRYVAVDPRVLDKIELVLRELARRRGEERMDFELEVHSGFRTPLHNSS 252
Query: 139 LSRRNRKIARKSQHVL-------------GKAVDFYI-PGVSLRSLYKIAIRLK---RGG 181
+ AR S+H+ G+ I + RL GG
Sbjct: 253 V----EGSARDSRHLYGDAADVAIDADGDGR---LTIFDAYRVEQAVDWVERLHPELAGG 305
Query: 182 VGYYS------KFLHIDVGRVR-SW 199
+G YS + HID R W
Sbjct: 306 LGVYSSRRYATPYCHIDARGERKRW 330
>gi|302524729|ref|ZP_07277071.1| peptidase M15B and M15C [Streptomyces sp. AA4]
gi|302433624|gb|EFL05440.1| peptidase M15B and M15C [Streptomyces sp. AA4]
Length = 208
Score = 40.9 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 14/75 (18%)
Query: 100 SIDMDPQLFDFLWEI-QQYFSVPEYIYILSGYRTQETNKMLSR-------------RNRK 145
++DP+ D L + + SG+R+ L R R
Sbjct: 79 VANLDPEFLDALRRAAKDAADDGVEFRVNSGWRSPAYQNQLRRKAIAKYGSEQEAARWVA 138
Query: 146 IARKSQHVLGKAVDF 160
A +S HVLG A+D
Sbjct: 139 TADQSAHVLGNAIDL 153
>gi|121634707|ref|YP_974952.1| putative ATP binding protein [Neisseria meningitidis FAM18]
gi|120866413|emb|CAM10158.1| putative ATP binding protein [Neisseria meningitidis FAM18]
gi|325132349|gb|EGC55042.1| putative ATP binding protein [Neisseria meningitidis M6190]
gi|325138468|gb|EGC61034.1| Peptidase M15 family protein [Neisseria meningitidis ES14902]
gi|325198136|gb|ADY93592.1| Peptidase M15 family protein [Neisseria meningitidis G2136]
Length = 157
Score = 40.9 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I + S +R++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVTSCFRSERVNKLV-----GGSPTSAHRHGLAADCDASGMTSPA 93
Query: 170 LYKIAIRLKRGG 181
K+ I+++ G
Sbjct: 94 FAKLLIKMRDEG 105
>gi|315937124|gb|ADU56131.1| hypothetical protein CA915-10 [uncultured organism CA915]
Length = 205
Score = 40.9 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 15/91 (16%)
Query: 84 GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKML--- 139
GL + D H +++P+L + L + +++ SG+R+ E + L
Sbjct: 61 GLPDGATVFDDRHPG-VANLNPRLIEALRAATTEAASHGVAVHVTSGWRSPEYQERLLRE 119
Query: 140 --------SRRNRKIAR--KSQHVLGKAVDF 160
R +A +S HV G AVD
Sbjct: 120 AIMKYGSERAAARWVAPVDRSAHVSGNAVDL 150
>gi|325142162|gb|EGC64585.1| Peptidase M15 family protein [Neisseria meningitidis 961-5945]
Length = 157
Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I + S +R++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVTSCFRSERVNKLV-----GGSPTSAHRHGLAADCDASGMTSPA 93
Query: 170 LYKIAIRLK 178
K+ I+++
Sbjct: 94 FAKLLIKMR 102
>gi|299136372|ref|ZP_07029556.1| hypothetical protein AciX8DRAFT_0861 [Acidobacterium sp. MP5ACTX8]
gi|298602496|gb|EFI58650.1| hypothetical protein AciX8DRAFT_0861 [Acidobacterium sp. MP5ACTX8]
Length = 364
Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 19/175 (10%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGS 68
+++ + + LY V +P+ L+ ++ + + Q++ ++
Sbjct: 148 VIRPLAVPLYTREGRLIVPAPLKGTREILVHQNRMADAAGLSRIQDDTDLDRMRAQH--- 204
Query: 69 KAIVTFKR-GSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL 127
+V F E L R W K D F E +++
Sbjct: 205 -LLVGFPDTPGLAVNEALPYNRRYARPWTVKFVT-------DTSRAFYARF--HEPLHLN 254
Query: 128 SGYRTQETNKMLSRRNRKIAR-----KSQHVLGKAVDFYIPGVSLRSLYKIAIRL 177
S RT L R N A S H+ G+A+DF G+S+ + + L
Sbjct: 255 SAVRTVAYQLRLQRVNGNAASIEGDVASPHLTGQAIDFGKHGMSMEEIAWMRSYL 309
>gi|293610489|ref|ZP_06692789.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826833|gb|EFF85198.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 228
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 38/136 (27%)
Query: 93 YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
DW + + P+ L + + V + S YR N R
Sbjct: 88 RDWQKCGVEPYAVPPREIWSNIVPTLSILKALVED-GVINDFEVTSVYRALSLN-----R 141
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------------AIRLKRGGVGY 184
A S+HV A+DF I L + A+++ G+G
Sbjct: 142 CAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQFWATKGQALKM---GLGV 198
Query: 185 Y-SKFLHIDVGRVRSW 199
Y S +HID R+W
Sbjct: 199 YASGQIHIDSQGFRAW 214
>gi|325123943|gb|ADY83466.1| hypothetical protein BDGL_002880 [Acinetobacter calcoaceticus
PHEA-2]
Length = 226
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 48/151 (31%), Gaps = 40/151 (26%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ L + V
Sbjct: 71 QKGLADLVPDHELLSSARDWQKCGVEPYAVPPREIWSNIVPTLSILKALVDD-GVINDFE 129
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 130 VTSVYRALSLN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 184
Query: 174 ----AIRLKRGGVGYY-SKFLHIDVGRVRSW 199
L G+G Y S +HID R+W
Sbjct: 185 WATKGQALNM-GLGVYASGQIHIDSQGFRAW 214
>gi|282890285|ref|ZP_06298815.1| hypothetical protein pah_c014o177 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499942|gb|EFB42231.1| hypothetical protein pah_c014o177 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 277
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG 164
P L D L IQ + + I G+ + + + R S+H++G V FY+ G
Sbjct: 121 PVLIDLLNHIQAKTNSK--VVITCGHSCPDHHAYSDQTPDN--RYSKHMIGAEVAFYVQG 176
Query: 165 V 165
+
Sbjct: 177 M 177
>gi|148555086|ref|YP_001262668.1| peptidase M15A [Sphingomonas wittichii RW1]
gi|148500276|gb|ABQ68530.1| Peptidase M15A [Sphingomonas wittichii RW1]
Length = 184
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 16/70 (22%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSL 167
L ++ F + + SG R SQH G+A DF +PGV+
Sbjct: 81 VSILEPVRARFG---PVRVTSGLR-------------LFTPDSQHGKGEAADFEVPGVAN 124
Query: 168 RSLYKIAIRL 177
++ + +
Sbjct: 125 LAVARWIRDM 134
>gi|313203558|ref|YP_004042215.1| hypothetical protein Palpr_1081 [Paludibacter propionicigenes WB4]
gi|312442874|gb|ADQ79230.1| hypothetical protein Palpr_1081 [Paludibacter propionicigenes WB4]
Length = 248
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 105 PQLFDFLWEI----QQYFSVPEY----IYILSGYRTQETNKMLSRRNRKIARKSQHVLGK 156
P+ D L EI QQ + +Y I S RT+ET LS RN S H+ G
Sbjct: 124 PEAIDMLNEIGYRFQQRLAEKKYNIYRFRITSLLRTEETQNKLSHRNTNATAHSAHLYGT 183
Query: 157 AVDF 160
VD
Sbjct: 184 TVDI 187
>gi|257095476|ref|YP_003169117.1| hypothetical protein CAP2UW1_3939 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048000|gb|ACV37188.1| hypothetical protein CAP2UW1_3939 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 208
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
FL + SG+R N + A+ S H+ +AVD
Sbjct: 109 FLKRYHDATGATAPDGVNSGWRPPSVNAA----TKNAAKNSPHLTAQAVDL 155
>gi|228904891|ref|ZP_04068945.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 4222]
gi|228854905|gb|EEM99509.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 4222]
Length = 683
Score = 40.2 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR-SLYKIA--IRLKRGGVGYY 185
GYRT + ++R +S H +G ++D Y + A + VG
Sbjct: 588 GYRTLK----IARGFDPSDGESSHSIGISMDIYADSTEEAIYIADTAWLTGFRAIAVG-- 641
Query: 186 SKFLHIDVGRVRSW 199
F+HID+G +W
Sbjct: 642 PNFVHIDIGPESTW 655
>gi|319937486|ref|ZP_08011891.1| VanXYG2 [Coprobacillus sp. 29_1]
gi|319807326|gb|EFW03935.1| VanXYG2 [Coprobacillus sp. 29_1]
Length = 247
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQE----------TNKMLSRRNRKIA- 147
+I ++ + ++ L I Q + I ++SG+RT+E N + NR +A
Sbjct: 37 DNISLEKRTYNLLKNILQDINQTHQISLVSGFRTEEEQTLIYKDSLYNNGIEFTNRYVAL 96
Query: 148 -RKSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGV 182
+ S+H G A+D G++ + I GV
Sbjct: 97 PQHSEHQTGLAIDL---GLNSDHIDFIRPEFPHVGV 129
>gi|262280568|ref|ZP_06058352.1| peptidase M15 family protein [Acinetobacter calcoaceticus RUH2202]
gi|262258346|gb|EEY77080.1| peptidase M15 family protein [Acinetobacter calcoaceticus RUH2202]
Length = 228
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 43/136 (31%), Gaps = 38/136 (27%)
Query: 93 YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRR 142
DW + + P+ L + V + S YR N R
Sbjct: 88 RDWQKCGVEPYAVPPREIWPNIVPTLSILKALVDD-GVINDFEVTSVYRALSLN-----R 141
Query: 143 NRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------------AIRLKRGGVGY 184
A S+HV A+DF I L + A+++ G+G
Sbjct: 142 CAGGADASRHVFNAALDFRIGLEQPSDLDQFNIQQSKTKICQFWATKGQALKM---GLGV 198
Query: 185 Y-SKFLHIDVGRVRSW 199
Y S +HID R+W
Sbjct: 199 YASGQIHIDSQGFRAW 214
>gi|224826702|ref|ZP_03699803.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Lutiella nitroferrum 2002]
gi|224601303|gb|EEG07485.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Lutiella nitroferrum 2002]
Length = 181
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 87 QLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRK 145
+LNR DW+ +D + + + +L GYR+ E L+ +
Sbjct: 47 RLNRADRDWN-----KLDAAFVQTVLRVMARLEARGFPMTLLEGYRSPERQDALAGQGTL 101
Query: 146 IAR----KSQHVLGKAVDF 160
+ + +S+H G AVD
Sbjct: 102 VTKAKGGQSKHQCGLAVDL 120
>gi|260889074|ref|ZP_05900337.1| serine-type D-Ala-D-Ala carboxypeptidase family protein [Leptotrichia
hofstadii F0254]
gi|260861134|gb|EEX75634.1| serine-type D-Ala-D-Ala carboxypeptidase family protein [Leptotrichia
hofstadii F0254]
Length = 1154
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 94 DWHSKQ-SIDMDPQLF----DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR 148
D + + +DP++ +F+ ++ I GYR + L+ +
Sbjct: 1012 DKVTNERIKKLDPRIRCHAKNFINRVEIELGYK--FRISDGYRDFKHQAGLTTAIKAAPG 1069
Query: 149 KSQHVLGKAVDF 160
KS H G A+D
Sbjct: 1070 KSYHNYGLAIDI 1081
>gi|291461169|ref|ZP_06027331.2| endolysin [Fusobacterium periodonticum ATCC 33693]
gi|291378443|gb|EFE85961.1| endolysin [Fusobacterium periodonticum ATCC 33693]
Length = 125
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAV 158
+ +D +L + + + P I G RT + K L + + KS H+ GKAV
Sbjct: 14 KLTTVDIRLQNLMNVAIKE--SPYDFSITEGIRTLKRQKELVAQGKSKTLKSYHLKGKAV 71
Query: 159 DFYI 162
D +
Sbjct: 72 DIAV 75
>gi|300310096|ref|YP_003774188.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300072881|gb|ADJ62280.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 279
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
+L +++ + + + ++ GYR+ E ML+ + A +S H G A D
Sbjct: 166 RLLLVFKIMKEKYGI--EMALIEGYRSPERQNMLAGMGGNVTNAAAFQSYHQYGLAGD 221
>gi|75758261|ref|ZP_00738386.1| Soluble lytic murein transglycosylase / N-acetylmuramoyl-L-alanine
amidase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74494315|gb|EAO57406.1| Soluble lytic murein transglycosylase / N-acetylmuramoyl-L-alanine
amidase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 442
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR-SLYKIA--IRLKRGGVGYY 185
GYRT + ++R +S H +G ++D Y + A + VG
Sbjct: 347 GYRTLK----IARGFDPSDGESSHSIGISMDIYADSTEEAIYIADTAWLTGFRAIAVG-- 400
Query: 186 SKFLHIDVGRVRSW 199
F+HID+G +W
Sbjct: 401 PNFVHIDIGPESTW 414
>gi|254804795|ref|YP_003083016.1| putative phage associated protein [Neisseria meningitidis alpha14]
gi|254668337|emb|CBA05350.1| putative phage associated protein [Neisseria meningitidis alpha14]
Length = 157
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I ++S R+++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVISCLRSEQVNKLV-----GGSPTSAHRHGLAADCDASGMTSPA 93
Query: 170 LYKIAIRLKRGG 181
K+ I+++ G
Sbjct: 94 FAKLLIKMRDEG 105
>gi|310828673|ref|YP_003961030.1| hypothetical protein ELI_3098 [Eubacterium limosum KIST612]
gi|308740407|gb|ADO38067.1| hypothetical protein ELI_3098 [Eubacterium limosum KIST612]
Length = 205
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGV-S 166
+ L + I + SG R + N LS + + H G+A D G S
Sbjct: 120 LNCLEATRCDLGSG--IQVTSGVRCPDYNASLSGSSSESL----HTAGRAFDCNAMGACS 173
Query: 167 LRSLYKIAIR--LKRGGVGYYSKFLHI 191
L L +I +R G VG + ++H+
Sbjct: 174 LEELLEIGLRNGFTWGYVG--NGYVHL 198
>gi|67458837|ref|YP_246461.1| hypothetical protein RF_0445 [Rickettsia felis URRWXCal2]
gi|67004370|gb|AAY61296.1| unknown [Rickettsia felis URRWXCal2]
Length = 136
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL------GK---AVD 159
+ L E++ F ++SG RT+E N + A+ S H+ GK AVD
Sbjct: 35 EKLIELRNIFGKSMP--VVSGCRTREYNTKIKG-----AKNSFHIYDYPHHSGKGCCAVD 87
Query: 160 FYIPGVSLR-SLYKIAIRLKRGGVGYYSKFLHID 192
+ R +L +A L VG + FLHID
Sbjct: 88 IATTDSNYRGNLTALAWSLGWS-VGIHKNFLHID 120
>gi|315917505|ref|ZP_07913745.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691380|gb|EFS28215.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 135
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ P L + S P I G R+ E K L + + +S H+ G AVD I
Sbjct: 23 VHPTLVKLMKT--AILSSPFPFVITEGCRSLERQKQLLKEKKTRTLQSYHLTGHAVDIAI 80
>gi|317059023|ref|ZP_07923508.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313684699|gb|EFS21534.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 137
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ P L + S P I G R+ E K L + + +S H+ G AVD I
Sbjct: 23 VHPTLVKLMKT--AILSSPFPFVITEGCRSLERQKQLLKEKKTRTLQSYHLTGHAVDIAI 80
>gi|257466349|ref|ZP_05630660.1| hypothetical protein FgonA2_02779 [Fusobacterium gonidiaformans
ATCC 25563]
Length = 127
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ P L + S P I G R+ E K L + + +S H+ G AVD I
Sbjct: 15 VHPTLVKLMKT--AILSSPFPFVITEGCRSLERQKQLLKEKKTRTLQSYHLTGHAVDIAI 72
>gi|257452482|ref|ZP_05617781.1| putative phage endolysin [Fusobacterium sp. 3_1_5R]
Length = 129
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+ P L + S P I G R+ E K L + + +S H+ G AVD I
Sbjct: 15 VHPTLVKLMKT--AILSSPFPFVITEGCRSLERQKQLLKEKKTRTLQSYHLTGHAVDIAI 72
>gi|237749693|ref|ZP_04580173.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229374708|gb|EEO25099.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 347
Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 105 PQLFDFLWEIQQ-YFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+L L +I+Q + + I SG R E NK L ++ SQH+ A D
Sbjct: 192 KKLCTELEKIRQFALNNGYMLQITSGVRCPELNKKLE---PNASKTSQHLSASAAD 244
>gi|148255264|ref|YP_001239849.1| hypothetical protein BBta_3868 [Bradyrhizobium sp. BTAi1]
gi|146407437|gb|ABQ35943.1| hypothetical protein BBta_3868 [Bradyrhizobium sp. BTAi1]
Length = 575
Score = 39.4 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 26/79 (32%), Gaps = 10/79 (12%)
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKML----SRRNRKIAR 148
D S + P + + IQ+ + I +R+ L R I
Sbjct: 22 DRRSVDLAFLHPAIRQSVQTIQRQLNSEGHPFEIFEAFRSPHRQAYLYAQGRTRPGNIVT 81
Query: 149 K-----SQHVLGKAVDFYI 162
K S H G AVDF +
Sbjct: 82 KAQPWMSYHQYGLAVDFVL 100
>gi|304319736|ref|YP_003853379.1| hypothetical protein PB2503_00787 [Parvularcula bermudensis
HTCC2503]
gi|303298639|gb|ADM08238.1| hypothetical protein PB2503_00787 [Parvularcula bermudensis
HTCC2503]
Length = 567
Score = 39.4 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 85 LSQLNRL----LYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLS 140
LS+L L + ++ M L L + +Q E + + SGYR+ +T L
Sbjct: 368 LSKLPHLDEMKIRMASIDETTSMPASLSALLSQCEQ---PGEALSLRSGYRSYDTQAQLY 424
Query: 141 RRNRKIAR-----KSQHVLGKAVDFYIPGV 165
RR R S+H LG A D + G
Sbjct: 425 RRAGPKGRVTPPGTSEHQLGLAADIDVNGR 454
>gi|262369722|ref|ZP_06063050.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315790|gb|EEY96829.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 239
Score = 39.4 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPG----------VSLRSLYKI 173
+ S YR N+ A S+H+ A+DF I +
Sbjct: 140 FEVTSVYRDLPLNQ-----CAGGANSSRHLFNSAIDFRIGSENPQPEDYAYIENTKYRLC 194
Query: 174 AIRLKRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 195 QFWTQHGQSLNMGLGLYASGQIHIDTQGYRTW 226
>gi|163943453|ref|YP_001642683.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163865650|gb|ABY46708.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
weihenstephanensis KBAB4]
Length = 695
Score = 39.4 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 129 GYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLR-SLYKIA--IRLKRGGVGYY 185
GYRT ++R +S H +G ++D Y + A I + VG
Sbjct: 600 GYRTL----RIARGFDPSDGESSHSIGISMDIYADSTEEAVYIADTAWIIGFRSIAVG-- 653
Query: 186 SKFLHIDVGRVRSW 199
F+H+D+G W
Sbjct: 654 PNFVHVDIGPEAVW 667
>gi|46445964|ref|YP_007329.1| hypothetical protein pc0330 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399605|emb|CAF23054.1| unknown protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 308
Score = 39.4 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
Q + P L D L IQ + + I G+ + N + K H++G
Sbjct: 145 NQKEFIYPILIDLLNYIQVK--TNKRVVITCGHCCPDHNVYVDSSPSYQFNK--HLIGAE 200
Query: 158 VDFYIPGV 165
VDFY+ G+
Sbjct: 201 VDFYVQGL 208
>gi|255066411|ref|ZP_05318266.1| peptidase M15 family protein [Neisseria sicca ATCC 29256]
gi|255049291|gb|EET44755.1| peptidase M15 family protein [Neisseria sicca ATCC 29256]
Length = 157
Score = 39.4 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I + S +R++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVTSCFRSERVNKLV-----GGSPTSAHRHGLAADCDASGMTSLA 93
Query: 170 LYKIAIRLKRGG 181
K+ I+++ G
Sbjct: 94 FAKLLIKMRDEG 105
>gi|229918678|ref|YP_002887324.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Exiguobacterium sp. AT1b]
gi|229470107|gb|ACQ71879.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Exiguobacterium sp. AT1b]
Length = 217
Score = 39.4 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
Query: 123 YIYILSGYRTQETNKMLSRRNRK---------IARKSQHVLGKAVDFYI 162
+ + SGYR+ + L + R A +S H G AVDF I
Sbjct: 86 EVRLTSGYRSAKEQNALYAQGRSEPGQVVTNAKAGQSYHNYGLAVDFVI 134
>gi|325128044|gb|EGC50941.1| peptidase M15 family protein [Neisseria meningitidis N1568]
Length = 157
Score = 39.4 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I + S R+++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVTSCLRSEQVNKLV-----GGSPTSAHRHGLAADCDASGMTSPA 93
Query: 170 LYKIAIRLKRGG 181
K+ I+++ G
Sbjct: 94 FAKLLIKMRDEG 105
>gi|294648376|ref|ZP_06725876.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292825726|gb|EFF84429.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 148
Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+DP+L + + V I G RT+ T + ++ + S+H+ G AVD
Sbjct: 16 VDPRLVKVIKRAIEVTEVD--FTITEGLRTKATQALYVKQGKSQTMNSKHLEGLAVDL 71
>gi|167564286|ref|ZP_02357202.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
oklahomensis EO147]
Length = 155
Score = 39.0 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 21 KDASRDWNLLDTDFRT--------RLLLVYKIMHERYGY--EMALLEGYRSPERQNRLAQ 70
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 71 MGSNVTNAAAFQSYHQYGLAAD 92
>gi|254523900|ref|ZP_05135955.1| D-alanyl-D-alanine carboxypeptidase family protein
[Stenotrophomonas sp. SKA14]
gi|219721491|gb|EED40016.1| D-alanyl-D-alanine carboxypeptidase family protein
[Stenotrophomonas sp. SKA14]
Length = 198
Score = 39.0 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 103 MDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKMLSRRNRKI----ARKSQHVLGKA 157
+ P L + + +Q + + + GYR+ E L + A S H G A
Sbjct: 5 VSPALREKVEAVQAQLAAEGFDVRPVEGYRSPERQAALLASGSGVTSVGAFSSCHNFGLA 64
Query: 158 VD--FYIPGVSLRSLYKI 173
+D +I G +L
Sbjct: 65 LDAAVFINGEPSWNLDDA 82
>gi|167571435|ref|ZP_02364309.1| hypothetical protein BoklC_16454 [Burkholderia oklahomensis C6786]
Length = 283
Score = 39.0 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDTDFRT--------RLLLVYKIMHERYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGSNVTNAAAFQSYHQYGLAAD 220
>gi|296159935|ref|ZP_06842756.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. Ch1-1]
gi|295889918|gb|EFG69715.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. Ch1-1]
Length = 213
Score = 39.0 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 81 KDASRDWNLLDADFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 130
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 131 MGGNVTNAAAFQSYHQYGLAAD 152
>gi|332142297|ref|YP_004428035.1| hypothetical protein MADE_1014515 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552319|gb|AEA99037.1| hypothetical protein MADE_1014515 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 137
Score = 39.0 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 42/142 (29%), Gaps = 45/142 (31%)
Query: 74 FKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL------ 127
+ + + + L S + +D +L + ++++ F I
Sbjct: 6 YFIAQELVPKSV----FLKRGARSLEL--IDERLLITIDQLREKFG---PCTINNWHSGG 56
Query: 128 ----SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIAI-------- 175
SG RT + + + SQH G+A D + + +
Sbjct: 57 GFTESGLRTPDC--------KHYSPFSQHTFGRAADCKFSKATPEEVRHYILTHPEEFPF 108
Query: 176 ----RLKRGGVGYYSKFLHIDV 193
L ++HIDV
Sbjct: 109 ITFVELDT------PTWVHIDV 124
>gi|323487942|ref|ZP_08093198.1| L-alanoyl-D-glutamate peptidase [Planococcus donghaensis MPA1U2]
gi|323398366|gb|EGA91156.1| L-alanoyl-D-glutamate peptidase [Planococcus donghaensis MPA1U2]
Length = 184
Score = 39.0 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 11/63 (17%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK---------IARKSQHVLGKAVD 159
D L + I I GYR+ E + L + R A +S H G A+D
Sbjct: 52 DLLVTRAAEIGID--ILITDGYRSPEEQQGLHNQGRNMPGAIVTYAAAGESYHNYGLAID 109
Query: 160 FYI 162
+ +
Sbjct: 110 YAL 112
>gi|169786844|ref|YP_001700738.1| LysM domain-containing protein [Acinetobacter baumannii SDF]
gi|169150761|emb|CAP02954.1| putative peptidoglycan with LysM domain [Acinetobacter baumannii]
Length = 442
Score = 39.0 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR-KSQHVLGKAVDF 160
P + + + + + GYR+ LS +S H G A+D
Sbjct: 309 PYVIRLINTAYKKLGITW--VVTDGYRSPAAQGNLSGGVTNAGPLQSYHQYGLAIDV 363
>gi|78065052|ref|YP_367821.1| hypothetical protein Bcep18194_A3576 [Burkholderia sp. 383]
gi|77965797|gb|ABB07177.1| hypothetical protein Bcep18194_A3576 [Burkholderia sp. 383]
Length = 203
Score = 39.0 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 71 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 120
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 121 MGGSVTNAAAFQSYHQFGLAAD 142
>gi|134294584|ref|YP_001118319.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia vietnamiensis G4]
gi|134137741|gb|ABO53484.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia vietnamiensis G4]
Length = 203
Score = 38.6 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 71 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 120
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 121 MGTNVTNAAAFQSYHQFGLAAD 142
>gi|325523145|gb|EGD01542.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. TJI49]
Length = 281
Score = 38.6 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGGSVTNAAAFQSYHQFGLAAD 220
>gi|114800050|ref|YP_760048.1| hypothetical protein HNE_1330 [Hyphomonas neptunium ATCC 15444]
gi|114740224|gb|ABI78349.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 135
Score = 38.6 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 104 DPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIP 163
D + D L +++ + I SG+R N ++ SQ AVD
Sbjct: 40 DAEFLDALEALRKEMG--RPLRINSGHRCAIWNVVV-----GGVPNSQRRR-IAVDIAFG 91
Query: 164 GVSLRSLYKIAIRLKRGGVGYYSKFLHID 192
R++ A RL G+ FLH+D
Sbjct: 92 KHDRRAMVAAAERLGFTGIA--KSFLHLD 118
>gi|255319930|ref|ZP_05361130.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|255302950|gb|EET82167.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
Length = 230
Score = 38.6 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAIRL----- 177
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 131 FEVTSVYRDLPLNQ-----CAGGANSSRHLFNSAIDFRIGPEFPQPEDYAFIENTKFKLC 185
Query: 178 ----KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 186 QFWSQHGQSFNMGLGLYASGQIHIDTHGYRTW 217
>gi|262379623|ref|ZP_06072779.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262299080|gb|EEY86993.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 238
Score = 38.6 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAIRL----- 177
+ S YR N+ A S+H+ A+DF I P Y
Sbjct: 139 FEVTSVYRDLPLNQ-----CAGGANSSRHLFNSAIDFRIGPEFPQPEDYAFIENTKFKLC 193
Query: 178 ----KRG-----GVGYY-SKFLHIDVGRVRSW 199
+ G G+G Y S +HID R+W
Sbjct: 194 QFWSQHGQSFNMGLGLYASGQIHIDTHGYRTW 225
>gi|221201701|ref|ZP_03574739.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans
CGD2M]
gi|221207224|ref|ZP_03580234.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD2]
gi|221172812|gb|EEE05249.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD2]
gi|221178517|gb|EEE10926.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans
CGD2M]
Length = 281
Score = 38.6 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGSNVTNAAAFQSYHQFGLAAD 220
>gi|161526075|ref|YP_001581087.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia multivorans ATCC 17616]
gi|189349209|ref|YP_001944837.1| putative peptidase M15B and M15C, D,D-carboxypeptidase
VanY/endolysins [Burkholderia multivorans ATCC 17616]
gi|221213353|ref|ZP_03586328.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD1]
gi|160343504|gb|ABX16590.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia multivorans ATCC 17616]
gi|189333231|dbj|BAG42301.1| probable peptidase M15B and M15C, D,D-carboxypeptidase
VanY/endolysins [Burkholderia multivorans ATCC 17616]
gi|221166805|gb|EED99276.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD1]
Length = 281
Score = 38.6 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGSNVTNAAAFQSYHQFGLAAD 220
>gi|315937021|gb|ADU56030.1| hypothetical protein CA37-7 [uncultured organism CA37]
Length = 219
Score = 38.2 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 14/81 (17%)
Query: 94 DWHSKQSIDMDPQLFDFL-WEIQQYFSVPEYIYILSGYRTQET-NKMLSR---------- 141
D ++D L L Y+ SG+R+ N++L
Sbjct: 72 DDRYPGVANLDRHLLQALRQAATDAADDGVEFYVNSGWRSPAYQNRLLREAVSKYGSEEE 131
Query: 142 --RNRKIARKSQHVLGKAVDF 160
R A S HV G AVD
Sbjct: 132 AARWVATADTSAHVSGNAVDI 152
>gi|313906026|ref|ZP_07839379.1| Serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium
cellulosolvens 6]
gi|313469139|gb|EFR64488.1| Serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium
cellulosolvens 6]
Length = 391
Score = 38.2 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 36/166 (21%)
Query: 23 SFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVST---GSKAIVTFKRGSQ 79
S + + + + L ++ R + + T G K G
Sbjct: 111 SRSTLDATAASAGKAVSIPATTLDGLPDLKTDDWRLILVNPTHTLPEGYKPETRELAGGI 170
Query: 80 YNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFL-WEIQQYFSVPEYIYILSGYRTQETNKM 138
Y+ + D ++FD L +Q + + SGYR ET +M
Sbjct: 171 YDTAVYNHYQYFC-----------DERIFDELTAMLQACTDAGFHPLVASGYREHETQQM 219
Query: 139 L---------------------SRRNRKIARKSQHVLGKAVDFYIP 163
L +++ + S+H LG A+D
Sbjct: 220 LFDDNIAGLEMQGMSREEAEKETKKVVAVPGTSEHELGLALDIACE 265
>gi|300313313|ref|YP_003777405.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
protein [Herbaspirillum seropedicae SmR1]
gi|300076098|gb|ADJ65497.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
protein [Herbaspirillum seropedicae SmR1]
Length = 279
Score = 38.2 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Query: 126 ILSGYRTQETNKMLSRRNRK----IARKSQHVLGKAVD 159
++ GYR+ + ML+ A +S H G A D
Sbjct: 184 LIEGYRSPQRQNMLAGMGGGITNAAAFQSYHQYGLAGD 221
>gi|108797322|ref|YP_637519.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Mycobacterium sp. MCS]
gi|108767741|gb|ABG06463.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Mycobacterium sp. MCS]
Length = 190
Score = 38.2 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 29/120 (24%)
Query: 78 SQYNQE--GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQE 134
Y E L+ D + +DP L + E + + + I SG+R+
Sbjct: 49 GGYLPEDGTLTAF-----DVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIG 103
Query: 135 TNKMLSRRNRK------IARK-------SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGG 181
+ L + +AR+ S HV+G+AVD PG A + R G
Sbjct: 104 FQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPG--------AAAWMSRNG 155
>gi|328542396|ref|YP_004302505.1| hypothetical protein SL003B_0776 [polymorphum gilvum SL003B-26A1]
gi|326412143|gb|ADZ69206.1| hypothetical protein SL003B_0776 [Polymorphum gilvum SL003B-26A1]
Length = 769
Score = 38.2 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L + E + +L+G++ R + H G A+DF + G S R
Sbjct: 340 LLQAYKNTLLDGEAVTVLAGWKAPSD----KGRAGSGTLAALHAEGLALDFKVRGRSYRD 395
Query: 170 LYKIAIRLKRGGVGYYSKFLHID 192
+ + GG+G+ + ID
Sbjct: 396 VGALLDPYHPGGLGFRKGQVQID 418
>gi|170696410|ref|ZP_02887538.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia graminis C4D1M]
gi|170138671|gb|EDT06871.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia graminis C4D1M]
Length = 213
Score = 38.2 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 81 KDASRDWNLLDADFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 130
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 131 IGSNVTNAAAFQSYHQYGLAAD 152
>gi|293608521|ref|ZP_06690824.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829094|gb|EFF87456.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 317
Score = 38.2 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 14/92 (15%)
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ----LFDFLWEIQQYFSVPEYIYILSGYR 131
+ ++ + N + W M+P+ L +++ + + +L GYR
Sbjct: 159 DNASFDGRAILDTNLVDRKWD-----KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYR 211
Query: 132 TQETNKMLSR---RNRKIARKSQHVLGKAVDF 160
+ ML+ R +S H G A D
Sbjct: 212 SPARQNMLAGNPNTTRARGYQSYHQFGLAADV 243
>gi|319793683|ref|YP_004155323.1| alcohol dehydrogenase groes domain protein [Variovorax paradoxus
EPS]
gi|315596146|gb|ADU37212.1| Alcohol dehydrogenase GroES domain protein [Variovorax paradoxus
EPS]
Length = 403
Score = 38.2 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 154 LGKAV-----DFYIPGVSLRSLYKIAIRLKRGGV----GYYSKFLH 190
G AV D + G S ++L + +RGGV G Y+ F+H
Sbjct: 269 KGSAVETVLTDLKLEGSSGKALRQAIAATRRGGVVSVPGVYAGFIH 314
>gi|323529930|ref|YP_004232082.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. CCGE1001]
gi|323386932|gb|ADX59022.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. CCGE1001]
Length = 281
Score = 37.9 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDADFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 IGSNVTNAAAFQSYHQYGLAAD 220
>gi|126432944|ref|YP_001068635.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Mycobacterium sp. JLS]
gi|126232744|gb|ABN96144.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Mycobacterium sp. JLS]
Length = 206
Score = 37.9 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 39/192 (20%)
Query: 6 IFRILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVS 65
++R + + + + + F +P ++ ++ E +
Sbjct: 3 VWRTVCRVSVAVGCACGVLFGAAPSHADP----AEPGGDTLVGPSASGTEPSSAPFD--- 55
Query: 66 TGSKAIVTFKRGSQYNQE--GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE- 122
G A TF Y E L+ D + +DP L + E + +
Sbjct: 56 IGPAATDTF---GGYLPEDGTLTAF-----DVENPIVGRLDPALLAAVQEATRAAAADGV 107
Query: 123 YIYILSGYRTQETNKMLSRRNRK------IARK-------SQHVLGKAVDFYIPGVSLRS 169
+ I SG+R+ + L + +AR+ S HV+G+AVD PG
Sbjct: 108 DVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPG----- 162
Query: 170 LYKIAIRLKRGG 181
A + R G
Sbjct: 163 ---AAAWMSRNG 171
>gi|123441975|ref|YP_001005958.1| putative phagelysin [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122088936|emb|CAL11745.1| putative phagelysin [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 131
Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + +++ P ++ G RT E + L + S+H+ G AVD
Sbjct: 22 DLVKVVRRALELTPLDFKVIEGRRTLERQRQLVKAGASQTLNSRHLTGHAVDI 74
>gi|85374608|ref|YP_458670.1| hypothetical protein ELI_08905 [Erythrobacter litoralis HTCC2594]
gi|84787691|gb|ABC63873.1| hypothetical protein ELI_08905 [Erythrobacter litoralis HTCC2594]
Length = 216
Score = 37.9 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 25/114 (21%)
Query: 105 PQLFDFLWEIQQYFSVP-EYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-I 162
P + L ++ + +LS YRT + N +R S H+ A+D +
Sbjct: 97 PNIVPALRLVRDEVKPRVGEVEVLSSYRTPDLNTCARGASR-----SNHLDFSALDLRTV 151
Query: 163 PGVSLRSLYK--IAIRLKRG-----GVGYY----------SKFLHIDVGRVRSW 199
G S Y+ A++ G G+G Y +F HID RSW
Sbjct: 152 DGKSGPDFYQRLCAMQDAAGPGSRMGLGAYYDASRPNYAGGRF-HIDAEGFRSW 204
>gi|24371578|ref|NP_720320.1| 19 [Enterobacteria phage ST64T]
gi|318065944|ref|YP_004123802.1| Gp19 [Salmonella phage ST160]
gi|24250805|gb|AAL15518.1| 19 [Salmonella phage ST64T]
gi|289066930|gb|ADC81141.1| Gp19 [Salmonella phage ST160]
Length = 132
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + I++ P ++ G RTQ K + + S+H+ G AVD
Sbjct: 22 DLVKVIRRALEITPVDFIVIEGVRTQARQKDMVATGKSQTMNSRHLSGNAVDI 74
>gi|3676075|emb|CAA09701.1| gp19 [Phage PS3]
Length = 132
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + I++ P ++ G RTQ K + + S+H+ G AVD
Sbjct: 22 DLVKVIRRALEITPVDFIVIEGVRTQARQKDMVATGKSQTMNSRHLSGNAVDI 74
>gi|332163135|ref|YP_004299712.1| Peptidase M15 family [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|83318564|emb|CAI77378.1| putative phage-related protein [Yersinia enterocolitica W22703]
gi|325667365|gb|ADZ44009.1| Peptidase M15 family [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863492|emb|CBX73609.1| L-alanyl-D-glutamate peptidase [Yersinia enterocolitica W22703]
Length = 133
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++ P L + + P ++ G R+ E + L R S+H+ G AVD
Sbjct: 20 NIHPDLVLIVR--RALTLSPLDFRVIEGVRSLERQRQLVRNGSSKTLNSRHLTGHAVDL 76
>gi|170703853|ref|ZP_02894546.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia ambifaria IOP40-10]
gi|170131239|gb|EDS99873.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia ambifaria IOP40-10]
Length = 281
Score = 37.9 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGTNVTNAAAFQSYHQFGLAAD 220
>gi|171322683|ref|ZP_02911440.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia ambifaria MEX-5]
gi|171091974|gb|EDT37429.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia ambifaria MEX-5]
Length = 281
Score = 37.9 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGTNVTNAAAFQSYHQFGLAAD 220
>gi|262042259|ref|ZP_06015425.1| endolysin [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259040408|gb|EEW41513.1| endolysin [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 124
Score = 37.9 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 95 WHS-KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHV 153
S +DP+L + I G RT+E K L + + + S+H+
Sbjct: 8 HRSENNLKGVDPRLVTI--ARRALVLSEVDFGITEGLRTKERQKQLFEQGKSMTMNSRHL 65
Query: 154 LGKAVDF--YIPG 164
G A+D YI G
Sbjct: 66 TGDAIDVVAYIDG 78
>gi|172059482|ref|YP_001807134.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia ambifaria MC40-6]
gi|171991999|gb|ACB62918.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia ambifaria MC40-6]
Length = 281
Score = 37.9 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGTNVTNAAAFQSYHQFGLAAD 220
>gi|329925231|ref|ZP_08280174.1| putative peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK
[Paenibacillus sp. HGF5]
gi|328940064|gb|EGG36397.1| putative peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK
[Paenibacillus sp. HGF5]
Length = 197
Score = 37.9 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQE-----TNKMLSRRNRKI---- 146
+ + + P + E+ + I I GYR+ E N+ S +
Sbjct: 44 TPEITQLHPYVLQQKNELVRLTKKKGITIVITDGYRSHEEQTRIYNQGRSTEGNIVTNAK 103
Query: 147 ARKSQHVLGKAVDFYI 162
A +S H G A+DF +
Sbjct: 104 AGESLHNYGLAIDFAL 119
>gi|318603982|emb|CBY25480.1| putative phage-related protein precursor [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 133
Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 102 DMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
++ P L + + P ++ G R+ E + L R S+H+ G AVD
Sbjct: 20 NIHPDLVLIVR--RALTLSPLDFRVIEGVRSLERQRQLVRNGSSKTLNSRHLTGHAVDL 76
>gi|215483900|ref|YP_002326125.1| L-alanyl-D-glutamate peptidase [Acinetobacter baumannii AB307-0294]
gi|213987322|gb|ACJ57621.1| L-alanyl-D-glutamate peptidase [Acinetobacter baumannii AB307-0294]
Length = 242
Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 102 DMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR---RNRKIARKSQHVL 154
M+P+ L +++ + + +L GYR+ ML+ R +S H
Sbjct: 105 KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYRSPARQNMLAGNPNTTRAKGYQSYHQF 162
Query: 155 GKAVDF 160
G A D
Sbjct: 163 GLAADV 168
>gi|325121720|gb|ADY81243.1| hypothetical protein BDGL_000657 [Acinetobacter calcoaceticus
PHEA-2]
Length = 305
Score = 37.9 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 14/92 (15%)
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ----LFDFLWEIQQYFSVPEYIYILSGYR 131
+ ++ + N + W M+P+ L +++ + + +L GYR
Sbjct: 147 DNASFDGRAILDTNLVDRKWD-----KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYR 199
Query: 132 TQETNKMLSR---RNRKIARKSQHVLGKAVDF 160
+ ML+ R +S H G A D
Sbjct: 200 SPARQNMLAGNPNTTRARGYQSYHQFGLAADV 231
>gi|294634931|ref|ZP_06713449.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685]
gi|291091640|gb|EFE24201.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685]
Length = 890
Score = 37.9 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 29/143 (20%)
Query: 28 SPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIY-VVSTGSKAIVTFKRGSQYNQEGLS 86
SP+ L L Q +++S+ +LD R + V+ G + + L
Sbjct: 141 SPVPILPGRLAFISQSAAVSNTILDWARQREIGFSLFVALGDSLDS--------DVDEL- 191
Query: 87 QLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKI 146
L+ L D + + + L + +++ S R+ NK +
Sbjct: 192 -LDYLARDAKTGAILLY----LEHLHDARRFL---------SAARSAARNKPILVIKSGR 237
Query: 147 ARKSQHVLGKAVDFYIPGVSLRS 169
+ +++HVLG+A PG+ +
Sbjct: 238 SPQARHVLGEA-----PGLDIAY 255
>gi|238026072|ref|YP_002910303.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia glumae BGR1]
gi|237875266|gb|ACR27599.1| Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia glumae BGR1]
Length = 283
Score = 37.9 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGTNVTNAAAYQSYHQFGLAAD 220
>gi|307727737|ref|YP_003910950.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. CCGE1003]
gi|307588262|gb|ADN61659.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia sp. CCGE1003]
Length = 319
Score = 37.5 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 187 KDASRDWNLLDADFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 236
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 237 IGSNVTNAAAFQSYHQYGLAAD 258
>gi|332865715|ref|ZP_08436525.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
6013113]
gi|332874594|ref|ZP_08442495.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
6014059]
gi|322507940|gb|ADX03394.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
gi|323517532|gb|ADX91913.1| D-alanyl-D-alanine carboxypeptidase family [Acinetobacter baumannii
TCDC-AB0715]
gi|332735142|gb|EGJ66224.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
6013113]
gi|332737232|gb|EGJ68158.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
6014059]
Length = 316
Score = 37.5 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 102 DMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR---RNRKIARKSQHVL 154
M+P+ L +++ + + +L GYR+ ML+ R +S H
Sbjct: 179 KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYRSPARQNMLAGNPNTTRAKGYQSYHQF 236
Query: 155 GKAVDF 160
G A D
Sbjct: 237 GLAADV 242
>gi|169633784|ref|YP_001707520.1| hypothetical protein ABSDF2235 [Acinetobacter baumannii SDF]
gi|169796438|ref|YP_001714231.1| hypothetical protein ABAYE2399 [Acinetobacter baumannii AYE]
gi|213156451|ref|YP_002318871.1| D-alanyl-D-alanine carboxypeptidase family [Acinetobacter baumannii
AB0057]
gi|260555505|ref|ZP_05827726.1| D-alanyl-D-alanine carboxypeptidase family [Acinetobacter baumannii
ATCC 19606]
gi|332854741|ref|ZP_08435519.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
6013150]
gi|169149365|emb|CAM87249.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|169152576|emb|CAP01558.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
gi|213055611|gb|ACJ40513.1| D-alanyl-D-alanine carboxypeptidase family [Acinetobacter baumannii
AB0057]
gi|260412047|gb|EEX05344.1| D-alanyl-D-alanine carboxypeptidase family [Acinetobacter baumannii
ATCC 19606]
gi|332727827|gb|EGJ59230.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
6013150]
Length = 317
Score = 37.5 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 102 DMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR---RNRKIARKSQHVL 154
M+P+ L +++ + + +L GYR+ ML+ R +S H
Sbjct: 180 KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYRSPARQNMLAGNPNTTRAKGYQSYHQF 237
Query: 155 GKAVDF 160
G A D
Sbjct: 238 GLAADV 243
>gi|224775795|tpg|DAA06469.1| TPA_inf: GPR1/FUN34/YaaH-class plasma membrane protein [Gibberella
moniliformis]
Length = 289
Score = 37.5 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 19/84 (22%)
Query: 78 SQYNQEG--LSQLNRLLYDWHSKQSIDMDPQLFDFLW---------EIQQYFSVPEYIYI 126
+ ++ E L LNRL + QS+ M P+LF+ L+ +++Q F P I +
Sbjct: 19 NGFDPEAQRLESLNRL----RTAQSVQMSPELFEKLYLSPMNKVKGDLRQTFGNPTPIAL 74
Query: 127 LSGYR---TQETNKMLSRRNRKIA 147
+ G+ T T ++ R +
Sbjct: 75 V-GFLLAFTPLTCDLMGWRGAGGS 97
>gi|71907813|ref|YP_285400.1| hypothetical protein Daro_2191 [Dechloromonas aromatica RCB]
gi|71847434|gb|AAZ46930.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
Length = 282
Score = 37.5 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
+L +++ + ++ GYR+ E L + + A S H G A D
Sbjct: 165 RLLVVFKLMKERHGYD--MVLIEGYRSPERQARLYEQGAHVTQVGANMSYHQHGLAAD 220
>gi|224775791|tpg|DAA06467.1| TPA_inf: GPR1/FUN34/YaaH-class plasma membrane protein [Fusarium
oxysporum f. sp. lycopersici 4286]
Length = 289
Score = 37.5 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 19/84 (22%)
Query: 78 SQYNQEG--LSQLNRLLYDWHSKQSIDMDPQLFDFLW---------EIQQYFSVPEYIYI 126
+ ++ E L LNRL + QS+ M P+LF+ L+ +++Q F P I +
Sbjct: 19 NGFDPEAQRLESLNRL----RTAQSVQMSPELFEKLYLSPMNQVKGDLRQTFGNPTPIAL 74
Query: 127 LSGYR---TQETNKMLSRRNRKIA 147
+ G+ T T ++ R +
Sbjct: 75 V-GFLLAFTPLTCDLMGWRGAGGS 97
>gi|295110719|emb|CBL24672.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
Length = 187
Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 127 LSGYRTQETNKMLSRRNRKIAR--KSQHVLGKAVDFYIPGVSLR 168
+SGYR+ + K L R + +A S+H G A+D P V ++
Sbjct: 67 VSGYRSYDRQKELFRGSSYVAAPGTSEHQSGLAIDLSSPSVQMK 110
>gi|261405245|ref|YP_003241486.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Paenibacillus sp. Y412MC10]
gi|261281708|gb|ACX63679.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Paenibacillus sp. Y412MC10]
Length = 197
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 99 QSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQE-----TNKMLSRRNRKI----AR 148
+ + P + E+ + I I GYR+ E N+ S + A
Sbjct: 46 EITQLHPYVLQQKNELVRLTKKKGITIVITDGYRSHEEQTRIYNQGRSTEGNIVTNAKAG 105
Query: 149 KSQHVLGKAVDFYI 162
+S H G A+DF +
Sbjct: 106 ESLHNYGLAIDFAL 119
>gi|319946303|ref|ZP_08020541.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
ATCC 700641]
gi|319747456|gb|EFV99711.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
ATCC 700641]
Length = 257
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 36/128 (28%)
Query: 96 HSKQSIDMDPQLFD---------FLWEIQQYFSVPEYI----YILSGYRTQE-----TNK 137
+ +++PQL D + +Q+ + + ++SGYR+ E N+
Sbjct: 85 RDNKLAELNPQLVDVEEIKVDSRIAEQTKQFLAAARAVAPEESLISGYRSVEEQTELYNE 144
Query: 138 MLSR-RNRKIARK---------------SQHVLGKAVDFYIPGVSLRSLYK--IAIRLKR 179
+++ ++ + S+H G A+D P + + IA+ +
Sbjct: 145 RVAQLEATGLSHEEAEAQAQAQVQVPGASEHQTGLAIDMSAPNGQSEEVAQQIIALAPQY 204
Query: 180 GGVGYYSK 187
G V Y +
Sbjct: 205 GFVLRYPE 212
>gi|56962537|ref|YP_174263.1| L-alanoyl-D-glutamate peptidase [Bacillus clausii KSM-K16]
gi|56908775|dbj|BAD63302.1| L-alanoyl-D-glutamate peptidase [Bacillus clausii KSM-K16]
Length = 200
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 12/60 (20%)
Query: 124 IYILSGYRTQETNKMLSRRNRKI---------ARKSQHVLGKAVDFYI---PGVSLRSLY 171
I I GYRT E L ++ R +S H G A+DF + G L +
Sbjct: 79 ILITDGYRTPEEQDRLYQKGRDQHGRIVTNAKGGQSYHNFGLAIDFALLDEGGEPLWDIA 138
>gi|184157632|ref|YP_001845971.1| hypothetical protein ACICU_01312 [Acinetobacter baumannii ACICU]
gi|301347087|ref|ZP_07227828.1| D-alanyl-D-alanine carboxypeptidase family protein [Acinetobacter
baumannii AB056]
gi|301596129|ref|ZP_07241137.1| D-alanyl-D-alanine carboxypeptidase family protein [Acinetobacter
baumannii AB059]
gi|183209226|gb|ACC56624.1| hypothetical protein ACICU_01312 [Acinetobacter baumannii ACICU]
Length = 297
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 102 DMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR---RNRKIARKSQHVL 154
M+P+ L +++ + + +L GYR+ ML+ R +S H
Sbjct: 160 KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYRSPARQNMLAGNPNTTRAKGYQSYHQF 217
Query: 155 GKAVDF 160
G A D
Sbjct: 218 GLAADV 223
>gi|48696641|ref|YP_024420.1| hypothetical protein VP2p12 [Vibrio phage VP2]
gi|48696685|ref|YP_024979.1| hypothetical protein VP5_gp11 [Vibrio phage VP5]
gi|40806148|gb|AAR92066.1| hypothetical protein [Vibrio phage VP5]
gi|40950039|gb|AAR97630.1| hypothetical protein [Vibrio phage VP2]
Length = 157
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 33/109 (30%)
Query: 105 PQLFDFLWEIQQYFSVPEYIYIL----------SGYRTQETNKMLSRRNRKIARKSQHVL 154
P L L ++ I + G R+ ++ + S H
Sbjct: 31 PALLHTLNTLRDDLDCT--ITVNNWMYGGNFRWRGVRS--------SKSADYSETSMHSW 80
Query: 155 GKAVDFYIPGVSLRSLYKIAIRLKRGGVGYYS---------KFLHIDVG 194
G+A DF + G++ + I+ + Y ++HIDVG
Sbjct: 81 GRAADFDVKGMTAPEVVVHIIKNR----DKYPLITFIEIDINWVHIDVG 125
>gi|325843795|ref|ZP_08168037.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
gi|325489291|gb|EGC91669.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
Length = 339
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 15/108 (13%)
Query: 74 FKRGSQYNQEGLSQLNR-LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL--SGY 130
++ S Y L LN L + ++ + D L + + + ++ SGY
Sbjct: 155 YRLPSDYIPSDLVYLNVPLYRPDTNNEANYLRKVAADALSSLFSAANQEKGYALIARSGY 214
Query: 131 RTQET-----NKMLSRRN-------RKIARKSQHVLGKAVDFYIPGVS 166
R+ +T N +S A S+H G +D V+
Sbjct: 215 RSYKTQVNLYNNYVSTNGQQYADSYSARAGHSEHQTGLTIDITAKSVN 262
>gi|317406877|gb|EFV86961.1| hypothetical protein HMPREF0005_05938 [Achromobacter xylosoxidans
C54]
Length = 230
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 123 YIYILSGYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
+ ++ GYR+ E + L+ + + A +S H G A D
Sbjct: 126 EMVLIEGYRSPERQEELASKGSHVTNAGAYQSYHQYGLAAD 166
>gi|301512282|ref|ZP_07237519.1| D-alanyl-D-alanine carboxypeptidase family protein [Acinetobacter
baumannii AB058]
Length = 297
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 102 DMDPQ----LFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR---RNRKIARKSQHVL 154
M+P+ L +++ + + +L GYR+ ML+ R +S H
Sbjct: 160 KMNPRYKQRLLMVFKIMKEQYGY--ELVLLEGYRSPARQNMLAGNPNTTRAKGYQSYHQF 217
Query: 155 GKAVDF 160
G A D
Sbjct: 218 GLAADV 223
>gi|319900324|ref|YP_004160052.1| Peptidase M15A [Bacteroides helcogenes P 36-108]
gi|319415355|gb|ADV42466.1| Peptidase M15A [Bacteroides helcogenes P 36-108]
Length = 172
Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 12/60 (20%)
Query: 107 LFDFLWEI------QQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
L D L + + P I I SGYR NK + + S H G A D
Sbjct: 39 LIDSLHDAWEQHCNENGLGTPG-IRISSGYRGPALNKAV-----GGSTTSAHCHGYAFDL 92
>gi|198416115|ref|XP_002127276.1| PREDICTED: similar to expressed hypothetical protein [Ciona
intestinalis]
Length = 172
Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVL 154
H + I +DP + L + + + S +R + N+ + A S H++
Sbjct: 36 HKGRDIRVDPGFVNHLQTMHAAARFCNVTVKVTSSFR--KQNQPVPGSIVTPASHSNHLV 93
Query: 155 GKAVD 159
G A+D
Sbjct: 94 GHAID 98
>gi|284042881|ref|YP_003393221.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Conexibacter woesei DSM 14684]
gi|283947102|gb|ADB49846.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Conexibacter woesei DSM 14684]
Length = 195
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 14/75 (18%)
Query: 100 SIDMDPQLFDFLWEIQ-QYFSVPEYIYILSGYRTQETNKMLSR-----------RNRKIA 147
+DP L L + SG+R+ E + L R R +A
Sbjct: 66 VARLDPALLGALRRAATDAAGDGVEFVVESGWRSPEYQQQLLREAVVRYGSEEEAARWVA 125
Query: 148 --RKSQHVLGKAVDF 160
S HV G+AVD
Sbjct: 126 TPTTSAHVSGEAVDI 140
>gi|119866407|ref|YP_936359.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Mycobacterium sp. KMS]
gi|119692496|gb|ABL89569.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Mycobacterium sp. KMS]
Length = 229
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 29/120 (24%)
Query: 78 SQYNQE--GLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQE 134
Y E L+ D + +DP L + E + + + I SG+R+
Sbjct: 88 GGYLPEDGTLTAF-----DVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIG 142
Query: 135 TNKMLSRRNRK------IARK-------SQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGG 181
+ L + +AR+ S HV+G+AVD PG A + R G
Sbjct: 143 FQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPG--------AAAWMSRNG 194
>gi|325203985|gb|ADY99438.1| Peptidase M15 family protein [Neisseria meningitidis M01-240355]
Length = 157
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L +I++Y I + S R++ NK++ + S H G A D G++ +
Sbjct: 41 QLEKIREYVG--RPIIVTSCLRSERVNKLV-----GGSPTSAHRHGLAADCDASGMTSLA 93
Query: 170 LYKIAIRLKRGG 181
K+ I+++ G
Sbjct: 94 FAKLLIKMRDEG 105
>gi|167838080|ref|ZP_02464939.1| hypothetical protein Bpse38_16327 [Burkholderia thailandensis
MSMB43]
Length = 321
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L++ + A +S H G A D
Sbjct: 224 GYRSPERQNRLAQMGGNVTNAAAFQSYHQYGLAAD 258
>gi|34419525|ref|NP_899538.1| hypothetical protein KVP40.0291 [Vibrio phage KVP40]
gi|34333206|gb|AAQ64361.1| hypothetical protein KVP40.0291 [Vibrio phage KVP40]
Length = 161
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 28/112 (25%)
Query: 104 DPQLFDFLWEIQQYFSVPEYIYIL----------SGYRTQETNKMLSRRNRKIARKSQHV 153
D +L L +++ F I SG+R + + + +SQH
Sbjct: 30 DDRLLRTLDALRERFG---PCTINDWSWGGSFKYSGFRDE---NFYGSTQKYLDSRSQHK 83
Query: 154 LGKAVDFYIPGVSLRSLYKIAI------------RLKRGGVGYYSKFLHIDV 193
G+A D + + K + G ++HIDV
Sbjct: 84 YGRAADCKFRNHTADQVRKYILENPEEFPYVKFIECSPLANGTSMSWVHIDV 135
>gi|15242334|ref|NP_199333.1| disease resistance protein (TIR-NBS-LRR class), putative
[Arabidopsis thaliana]
gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
Length = 1261
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 54 EEVRTLKIYVVSTG-----SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ-L 107
+++R LK Y + + F G ++ + L LN L Y I+ DP+ L
Sbjct: 583 DDLRYLKFYNSHCHRECEAEDSKLNFPEGLEFLPQELRYLNWLKY-PEKNLPINFDPKNL 641
Query: 108 FDF 110
D
Sbjct: 642 IDL 644
>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
Length = 1232
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 54 EEVRTLKIYVVSTG-----SKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQ-L 107
+++R LK Y + + F G ++ + L LN L Y I+ DP+ L
Sbjct: 583 DDLRYLKFYNSHCHRECEAEDSKLNFPEGLEFLPQELRYLNWLKY-PEKNLPINFDPKNL 641
Query: 108 FDF 110
D
Sbjct: 642 IDL 644
>gi|302907316|ref|XP_003049619.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730555|gb|EEU43906.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 289
Score = 36.7 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
Query: 76 RGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWE---------IQQYFSVPEYIYI 126
Y+ E +++ L + S S+ M P+LF+ L+ ++Q F P I +
Sbjct: 17 MNGNYDPEA-QRMD-ALKQFRSAASVQMSPELFEKLYLSPMNEVKGNLRQTFGNPTPIAL 74
Query: 127 LSGYR---TQETNKMLSRRNRKIARKS 150
+ G+ T T ++ R + S
Sbjct: 75 V-GFLLAFTPLTCCLMGWRGAGGSGAS 100
>gi|53720705|ref|YP_109691.1| putative bacteriophage-related peptidase [Burkholderia pseudomallei
K96243]
gi|52211119|emb|CAH37107.1| putative bacteriophage-related peptidase [Burkholderia pseudomallei
K96243]
Length = 192
Score = 36.7 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L++ + A +S H G A D
Sbjct: 95 GYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAAD 129
>gi|34499436|ref|NP_903651.1| hypothetical protein CV_3981 [Chromobacterium violaceum ATCC 12472]
gi|34105288|gb|AAQ61643.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 285
Score = 36.7 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Query: 93 YDWHSKQSIDMDPQLF-DFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIAR--- 148
DW MD D L +++ + + +L GYR+ E L+ + K+ +
Sbjct: 155 RDW-----SRMDQAFVQDVLRVMEKMKARGFPMVLLEGYRSAERQNKLAGGSVKVTQAKG 209
Query: 149 -KSQHVLGKAVDF 160
+S+H G A D
Sbjct: 210 GESKHQYGLAADL 222
>gi|226326366|ref|ZP_03801884.1| hypothetical protein PROPEN_00214 [Proteus penneri ATCC 35198]
gi|225205149|gb|EEG87503.1| hypothetical protein PROPEN_00214 [Proteus penneri ATCC 35198]
Length = 129
Score = 36.7 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + + ++ +Y ++ G R+ E K L + + S+H+ G AVD
Sbjct: 20 DLVRVVHLALTLSKYDFVVIEGVRSLERQKALIKEGKSKTLNSRHLTGHAVDI 72
>gi|226313826|ref|YP_002773720.1| hypothetical protein BBR47_42390 [Brevibacillus brevis NBRC 100599]
gi|226096774|dbj|BAH45216.1| hypothetical membrane protein [Brevibacillus brevis NBRC 100599]
Length = 746
Score = 36.7 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 90 RLLYDWHSKQSIDM--DPQLFDFLWEIQQYFSVPEYIYILSG-YR-TQ 133
LL S+ + DPQ+ + + ++ F + + I I SG YR +
Sbjct: 160 YLLRTRRRMSSLKIVTDPQVISIMDDCRKRFGITKPIPIYSGSYRKSP 207
>gi|238786933|ref|ZP_04630733.1| Endolysin [Yersinia frederiksenii ATCC 33641]
gi|238724721|gb|EEQ16361.1| Endolysin [Yersinia frederiksenii ATCC 33641]
Length = 113
Score = 36.7 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
M P L + + P ++ G RT E + L + S+H+ G AVD
Sbjct: 1 MHPDLVKVVRRALEL--TPIDFKVIEGRRTIERQRDLVKAGASQTLNSRHLTGHAVDI 56
>gi|254253393|ref|ZP_04946711.1| hypothetical protein BDAG_02656 [Burkholderia dolosa AUO158]
gi|124896002|gb|EAY69882.1| hypothetical protein BDAG_02656 [Burkholderia dolosa AUO158]
Length = 281
Score = 36.7 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQHGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGSNVTNAAAFQSYHQFGLAAD 220
>gi|320198787|gb|EFW73387.1| hypothetical protein ECoL_04213 [Escherichia coli EC4100B]
Length = 112
Score = 36.7 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSG--YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
QLF + +F+ + + G YRT E + +++ IA S H AVDF +
Sbjct: 8 QLFTVMIASLIHFAEEKGYRLTFGEAYRTPEQAALNAKKGSGIA-NSLHTQRLAVDFNL 65
>gi|320105533|ref|YP_004181123.1| hypothetical protein AciPR4_0291 [Terriglobus saanensis SP1PR4]
gi|319924054|gb|ADV81129.1| hypothetical protein AciPR4_0291 [Terriglobus saanensis SP1PR4]
Length = 493
Score = 36.7 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 105 PQLFDFLWEI-QQYFSV-PEYIYILSGYRTQETNKMLSRRNRKIAR-----KSQHVLGKA 157
P FL ++ + +F+ E I + S RT + + L R N A S H+ G+A
Sbjct: 359 PWTVRFLSDLGRAHFARFHESIQVNSAVRTVDFQRQLMRVNGNAAPPTGDTASPHLTGQA 418
Query: 158 VDFYIPGVSLRSLYKI 173
+D G+S+ + +
Sbjct: 419 IDLAKHGMSMTEIAWM 434
>gi|83721600|ref|YP_443459.1| hypothetical protein BTH_I2952 [Burkholderia thailandensis E264]
gi|167583018|ref|ZP_02375892.1| hypothetical protein BthaT_33038 [Burkholderia thailandensis TXDOH]
gi|167621291|ref|ZP_02389922.1| hypothetical protein BthaB_33611 [Burkholderia thailandensis Bt4]
gi|83655425|gb|ABC39488.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 321
Score = 36.7 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L++ + A +S H G A D
Sbjct: 224 GYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAAD 258
>gi|53723966|ref|YP_104338.1| hypothetical protein BMA2824 [Burkholderia mallei ATCC 23344]
gi|76811061|ref|YP_334995.1| hypothetical protein BURPS1710b_3630 [Burkholderia pseudomallei
1710b]
gi|126438736|ref|YP_001060628.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 668]
gi|126452417|ref|YP_001067878.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1106a]
gi|134283303|ref|ZP_01770004.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 305]
gi|167721440|ref|ZP_02404676.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei DM98]
gi|167740409|ref|ZP_02413183.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 14]
gi|167817624|ref|ZP_02449304.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 91]
gi|167826028|ref|ZP_02457499.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 9]
gi|167847514|ref|ZP_02473022.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei B7210]
gi|167896102|ref|ZP_02483504.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 7894]
gi|167908676|ref|ZP_02495881.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei NCTC 13177]
gi|167912750|ref|ZP_02499841.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 112]
gi|167920711|ref|ZP_02507802.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei BCC215]
gi|217424776|ref|ZP_03456273.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
576]
gi|226198128|ref|ZP_03793699.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|237814013|ref|YP_002898464.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei MSHR346]
gi|242316965|ref|ZP_04815981.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1106b]
gi|254261758|ref|ZP_04952812.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1710a]
gi|52427389|gb|AAU47982.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76580514|gb|ABA49989.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126218229|gb|ABN81735.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
668]
gi|126226059|gb|ABN89599.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1106a]
gi|134245498|gb|EBA45591.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 305]
gi|217392232|gb|EEC32257.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
576]
gi|225929648|gb|EEH25664.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|237506740|gb|ACQ99058.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei MSHR346]
gi|242140204|gb|EES26606.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1106b]
gi|254220447|gb|EET09831.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1710a]
Length = 321
Score = 36.7 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L++ + A +S H G A D
Sbjct: 224 GYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAAD 258
>gi|326789444|ref|YP_004307265.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Clostridium lentocellum DSM 5427]
gi|326540208|gb|ADZ82067.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Clostridium lentocellum DSM 5427]
Length = 348
Score = 36.7 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 10/44 (22%)
Query: 127 LSGYRTQE-----TNKMLS-----RRNRKIARKSQHVLGKAVDF 160
+SGYR+ N + +R+ A +S+H G A+D
Sbjct: 98 ISGYRSYARQTTLYNNAVRTYGKNQRSSAKAGESEHQTGLAMDL 141
>gi|187919627|ref|YP_001888658.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia phytofirmans PsJN]
gi|187718065|gb|ACD19288.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia phytofirmans PsJN]
Length = 213
Score = 36.7 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L +++ + + +L GYR+ E L++
Sbjct: 81 KDASRDWNLLDADFRT--------RLLLVYKIMREQYGY--EMALLEGYRSPERQNRLAQ 130
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 131 MGGNVTNAAAFQSYHQYGLASD 152
>gi|121599578|ref|YP_991400.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei SAVP1]
gi|124384777|ref|YP_001027699.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei NCTC 10229]
gi|126449822|ref|YP_001082671.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei NCTC 10247]
gi|238563060|ref|ZP_00439474.2| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei GB8 horse 4]
gi|251767423|ref|ZP_02267206.2| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei PRL-20]
gi|254174821|ref|ZP_04881482.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei ATCC 10399]
gi|254180458|ref|ZP_04887056.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1655]
gi|254190439|ref|ZP_04896947.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254198567|ref|ZP_04904988.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei S13]
gi|254201412|ref|ZP_04907776.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei FMH]
gi|254206754|ref|ZP_04913105.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei JHU]
gi|254300693|ref|ZP_04968138.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 406e]
gi|254357243|ref|ZP_04973517.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei 2002721280]
gi|121228388|gb|ABM50906.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei SAVP1]
gi|124292797|gb|ABN02066.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
10229]
gi|126242692|gb|ABO05785.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
10247]
gi|147747306|gb|EDK54382.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei FMH]
gi|147752296|gb|EDK59362.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei JHU]
gi|148026307|gb|EDK84392.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei 2002721280]
gi|157810640|gb|EDO87810.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 406e]
gi|157938115|gb|EDO93785.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|160695866|gb|EDP85836.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei ATCC 10399]
gi|169655307|gb|EDS88000.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei S13]
gi|184210997|gb|EDU08040.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
pseudomallei 1655]
gi|238521442|gb|EEP84893.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei GB8 horse 4]
gi|243062821|gb|EES45007.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
mallei PRL-20]
Length = 283
Score = 36.7 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L++ + A +S H G A D
Sbjct: 186 GYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAAD 220
>gi|332702893|ref|ZP_08422981.1| ATP-dependent metalloprotease FtsH [Desulfovibrio africanus str.
Walvis Bay]
gi|332553042|gb|EGJ50086.1| ATP-dependent metalloprotease FtsH [Desulfovibrio africanus str.
Walvis Bay]
Length = 628
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 39 KYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSK 98
S + L + VR++ + G + F++ +Y EG SQ L + +
Sbjct: 39 PPPLSYSEFREQLAADNVRSVLVQ----GERIDGQFRQAIRYRPEGASQDMELAR-FRTY 93
Query: 99 QSIDMDPQLFDFLWE 113
DP+LFD L
Sbjct: 94 IPSFGDPELFDLLQA 108
>gi|332701839|ref|ZP_08421927.1| Peptidase M15A [Desulfovibrio africanus str. Walvis Bay]
gi|332551988|gb|EGJ49032.1| Peptidase M15A [Desulfovibrio africanus str. Walvis Bay]
Length = 162
Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRS 169
L ++ + ILSGYR + N+++ + S+H+ A D + G +
Sbjct: 47 LLQPMRDALGLT---TILSGYRPPDLNRLVRG-----SFMSRHLDALASDLVVAGFTPLE 98
Query: 170 LYK 172
+ +
Sbjct: 99 VCR 101
>gi|293374091|ref|ZP_06620426.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sanguinis
PC909]
gi|292647257|gb|EFF65232.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sanguinis
PC909]
Length = 237
Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 15/108 (13%)
Query: 74 FKRGSQYNQEGLSQLNR-LLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL--SGY 130
++ S Y L LN L + ++ + D L + + + ++ SGY
Sbjct: 53 YRLPSDYIPSDLVYLNVPLYRPDTNNEANYLRKVAADALSSLFSAANQEKGYALIARSGY 112
Query: 131 RTQET-----NKMLSRRN-------RKIARKSQHVLGKAVDFYIPGVS 166
R+ +T N +S A S+H G +D V+
Sbjct: 113 RSYKTQVNLYNNYVSTNGQQYADSYSARAGHSEHQTGLTIDITAKSVN 160
>gi|229098970|ref|ZP_04229905.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
gi|228684468|gb|EEL38411.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
Length = 259
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 13/95 (13%)
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI-QQYFSVPEYIYILSGYRTQE--- 134
Y E L + N K+ + D L ++ Q + + +SGYR+ +
Sbjct: 87 GYIPEDLKKPNVPFTSPKDKEKTLLRKDAADALEKMFQAAKNEGIELTAVSGYRSYKRQQ 146
Query: 135 --TNKMLSRRN-------RKIARKSQHVLGKAVDF 160
N + R+ I S+H G A+D
Sbjct: 147 SLHNTYIKRQGKTEANSVSAIPGTSEHQTGLAMDI 181
>gi|229105137|ref|ZP_04235788.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
gi|229117999|ref|ZP_04247359.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
gi|228665448|gb|EEL20930.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
gi|228678318|gb|EEL32544.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
Length = 259
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 13/95 (13%)
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEI-QQYFSVPEYIYILSGYRTQE--- 134
Y E L + N K+ + D L ++ Q + + +SGYR+ +
Sbjct: 87 GYIPEDLKKPNVPFTSPKDKEKTLLRKDAADALEKMFQAAKNEGIELTAVSGYRSYKRQQ 146
Query: 135 --TNKMLSRRN-------RKIARKSQHVLGKAVDF 160
N + R+ I S+H G A+D
Sbjct: 147 SLHNTYIKRQGKTEANSVSAIPGTSEHQTGLAMDI 181
>gi|327307760|ref|XP_003238571.1| hypothetical protein TERG_00562 [Trichophyton rubrum CBS 118892]
gi|326458827|gb|EGD84280.1| hypothetical protein TERG_00562 [Trichophyton rubrum CBS 118892]
Length = 3033
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 64 VSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDP--QLFDFLWEIQQYFSVP 121
+++G + K Y+++ +++ + +DP QLF + + F P
Sbjct: 1100 LNSG-TIKIRRKPDIWYDKDSYWEVDFYKRKARRRTVTLIDPHSQLFRLIANVFDGFEHP 1158
Query: 122 EYIYILSGYRTQETN 136
YI I Y+ N
Sbjct: 1159 GYITI---YQPASKN 1170
>gi|257137754|ref|ZP_05586016.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
thailandensis E264]
Length = 117
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L++ + A +S H G A D
Sbjct: 20 GYRSPERQNRLAQMGSNVTNAAAFQSYHQYGLAAD 54
>gi|229135345|ref|ZP_04264136.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
gi|228648120|gb|EEL04164.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
Length = 259
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 79 QYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQE--- 134
+Y E L++ N K+ + D L ++ Q + +SGYR+ +
Sbjct: 87 RYIPEDLTKPNVPFTSPKDKEKTLLRKDAADALEKMFQAAKKEGLELTAVSGYRSYKRQQ 146
Query: 135 --TNKMLSRRNRKIAR-------KSQHVLGKAVDF 160
N + R+ + A S+H G A+D
Sbjct: 147 SLHNTYIKRQGKAEADSVSAIPGTSEHQTGLAMDI 181
>gi|257469645|ref|ZP_05633737.1| hypothetical protein FulcA4_09913 [Fusobacterium ulcerans ATCC
49185]
gi|317063881|ref|ZP_07928366.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313689557|gb|EFS26392.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 162
Score = 36.3 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
L + ++ I + S YR+ N+ + + S H G AVD +
Sbjct: 69 LDKFRKLLG--RPIQVSSWYRSSRVNRRV-----GGSDSSAHQSGLAVDIML 113
>gi|239928463|ref|ZP_04685416.1| putative ammonium transporter [Streptomyces ghanaensis ATCC 14672]
Length = 450
Score = 36.3 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGS 68
+L + + A FV + I + D++ + + + Q+E R Y + T
Sbjct: 364 LLWRQVVAILAVAAFSFVMTWIIAKVVDVVIGFAEKETYAAVPGQDEERA---YDLRTAE 420
Query: 69 KAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
+ G ++E L+++ RLL D
Sbjct: 421 RLDALTAGGRGPDRETLTEIQRLLQDRR 448
>gi|53715125|ref|YP_101117.1| hypothetical protein BF3841 [Bacteroides fragilis YCH46]
gi|52217990|dbj|BAD50583.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 159
Score = 36.3 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEY-IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVD 159
+DP L D + + + I I SGYR N + + S H G A D
Sbjct: 38 TLLDP-LRDAWEDYCHHLGLGTPGIRISSGYRGPVLNAAV-----GGSITSAHCHGYAFD 91
Query: 160 F 160
Sbjct: 92 L 92
>gi|291436790|ref|ZP_06576180.1| ammonium transporter [Streptomyces ghanaensis ATCC 14672]
gi|291339685|gb|EFE66641.1| ammonium transporter [Streptomyces ghanaensis ATCC 14672]
Length = 441
Score = 36.3 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 9 ILKVIWIGLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGS 68
+L + + A FV + I + D++ + + + Q+E R Y + T
Sbjct: 355 LLWRQVVAILAVAAFSFVMTWIIAKVVDVVIGFAEKETYAAVPGQDEERA---YDLRTAE 411
Query: 69 KAIVTFKRGSQYNQEGLSQLNRLLYDWH 96
+ G ++E L+++ RLL D
Sbjct: 412 RLDALTAGGRGPDRETLTEIQRLLQDRR 439
>gi|297623112|ref|YP_003704546.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Truepera radiovictrix DSM 17093]
gi|297164292|gb|ADI14003.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Truepera radiovictrix DSM 17093]
Length = 229
Score = 36.3 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 21/110 (19%)
Query: 70 AIVTFKRGSQYNQEGL--SQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYI 126
T++ Y L ++L + ++ + D L +++ + +
Sbjct: 47 LDTTYRLPESYAPNDLVSAELAGFAGGFLVRELV------IDDLRALREAAEADGLALEL 100
Query: 127 LSGYRTQETNKM------------LSRRNRKIARKSQHVLGKAVDFYIPG 164
S YR+ + + R+ A S+H LG A+DF G
Sbjct: 101 TSAYRSYGYQERTFAYWVAREGLEAALRSSARAGHSEHQLGTALDFRSAG 150
>gi|307318440|ref|ZP_07597874.1| Peptidase M15A [Sinorhizobium meliloti AK83]
gi|306895780|gb|EFN26532.1| Peptidase M15A [Sinorhizobium meliloti AK83]
Length = 370
Score = 36.3 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 81 NQEGLSQL--NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYR 131
N GL++L + L+ ++ P+L D L ++ ++ + + SG R
Sbjct: 318 NLSGLARLTPSGLILQTEKVETGCFKPELLDILKTVEGHYGRK--VMVTSGLR 368
>gi|167946755|ref|ZP_02533829.1| hypothetical protein Epers_09488 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 136
Score = 36.3 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 12/69 (17%)
Query: 128 SGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKIA----IRLKRGGVG 183
SG+RT E + + SQH + A D G++ + + + R GG+
Sbjct: 61 SGFRTPE--------SPYFSATSQHAIANAYDIICVGLTPQEMQAVIQEKYQRFNIGGLE 112
Query: 184 YYSKFLHID 192
+ HID
Sbjct: 113 IAPSWTHID 121
>gi|301347151|ref|ZP_07227892.1| Peptidase M15 family protein [Acinetobacter baumannii AB056]
gi|301509931|ref|ZP_07235168.1| Peptidase M15 family protein [Acinetobacter baumannii AB058]
gi|301597085|ref|ZP_07242093.1| Peptidase M15 family protein [Acinetobacter baumannii AB059]
Length = 206
Score = 36.3 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 45/144 (31%), Gaps = 40/144 (27%)
Query: 82 QEGLSQL--NRLL----YDWHS--KQSIDMDPQ--------LFDFLWEIQQYFSVPEYIY 125
Q+GL+ L + L DW + + P+ + L + V
Sbjct: 70 QKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVDD-GVINDFE 128
Query: 126 ILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYIPGVSLRSLYKI------------ 173
+ S YR N R A S+HV A+DF I L +
Sbjct: 129 VTSVYRALALN-----RCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKLCQF 183
Query: 174 ----AIRLKRGGVGYY-SKFLHID 192
G+G Y S +HID
Sbjct: 184 WATKGQAFNM-GLGVYASGQIHID 206
>gi|302383747|ref|YP_003819570.1| phage endolysin [Brevundimonas subvibrioides ATCC 15264]
gi|302194375|gb|ADL01947.1| putative phage endolysin [Brevundimonas subvibrioides ATCC 15264]
Length = 127
Score = 36.3 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 98 KQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKA 157
+ P L + + P + G R+ L + S+H+ G A
Sbjct: 11 DHLKGVHPALAGVIEA--AILTSPVDFMVTEGLRSPARQAALVKAGASRTLNSRHLTGHA 68
Query: 158 VDF 160
VD
Sbjct: 69 VDL 71
>gi|332161423|ref|YP_004298000.1| putative phagelysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665653|gb|ADZ42297.1| putative phagelysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 131
Score = 35.9 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + +++ P ++ G RT E + L + + S+H+ G AVD
Sbjct: 22 DLVKVVRRALEITPIDFKVIEGCRTVERQRELVKDSASQTMNSRHLTGHAVDI 74
>gi|224534673|ref|ZP_03675245.1| putative carboxypeptidase [Borrelia spielmanii A14S]
gi|224513921|gb|EEF84243.1| putative carboxypeptidase [Borrelia spielmanii A14S]
Length = 247
Score = 35.9 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKML------------SRRNRKIARKSQHVLGK 156
D + I+ I I S YRTQE K L + I SQH +G
Sbjct: 96 DLIQLIKDAKRNGIEIKIKSAYRTQEYQKFLFDYNVKTYGKKVAEMQSAIPGHSQHHMGT 155
Query: 157 AVDF 160
A+DF
Sbjct: 156 AIDF 159
>gi|206558758|ref|YP_002229518.1| subfamily M15C metalopeptidase [Burkholderia cenocepacia J2315]
gi|198034795|emb|CAR50662.1| metallo peptidase, subfamily M15C [Burkholderia cenocepacia J2315]
Length = 281
Score = 35.9 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQHGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGSNVTNAAAFQSYHQFGLAAD 220
>gi|169351455|ref|ZP_02868393.1| hypothetical protein CLOSPI_02235 [Clostridium spiroforme DSM 1552]
gi|169291677|gb|EDS73810.1| hypothetical protein CLOSPI_02235 [Clostridium spiroforme DSM 1552]
Length = 320
Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Query: 80 YNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQE---- 134
Y + + + Y + Q+ +L++ ++ +Y++SGYR+
Sbjct: 151 YINDAYTSHDDPAYQYRKHQASK---RLYNDFVALRNKCRENGINLYVVSGYRSTASQRK 207
Query: 135 -TNKMLSRRNRKIAR-------KSQHVLGKAVDFYIPGVSLRSL 170
M + A S+H LG A D + S ++
Sbjct: 208 SYQHMADTYSIAEADKTCSRPGHSEHTLGLACDIALDNYSFENI 251
>gi|170024559|ref|YP_001721064.1| bacteriophage P7 related protein [Yersinia pseudotuberculosis
YPIII]
gi|186895201|ref|YP_001872313.1| bacteriophage P7 related protein [Yersinia pseudotuberculosis
PB1/+]
gi|169751093|gb|ACA68611.1| bacteriophage P7 related protein [Yersinia pseudotuberculosis
YPIII]
gi|186698227|gb|ACC88856.1| bacteriophage P7 related protein [Yersinia pseudotuberculosis
PB1/+]
Length = 131
Score = 35.9 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + +++ P ++ G RT E + L + S+H+ G AVD
Sbjct: 22 DLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDI 74
>gi|330863803|emb|CBX73899.1| hypothetical protein YEW_EI18550 [Yersinia enterocolitica W22703]
Length = 127
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + +++ P ++ G RT E + L + + S+H+ G AVD
Sbjct: 18 DLVKVVRRALEITPIDFKVIEGCRTVERQRELVKDSASQTMNSRHLTGHAVDI 70
>gi|169629106|ref|YP_001702755.1| putative VanY-type carboxypeptidase [Mycobacterium abscessus ATCC
19977]
gi|169241073|emb|CAM62101.1| Putative VanY-type carboxypeptidase [Mycobacterium abscessus]
Length = 204
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKML------SRRNRKI 146
D S I +DP L + + + + I SG+R++ + L + + +
Sbjct: 76 DTSSLAVIRLDPSLLRAVQDAANSAAADGVTLLITSGWRSRAFQQQLLDDAVQTYGSLAV 135
Query: 147 ARK-------SQHVLGKAVDF 160
AR+ S HV GKAVD
Sbjct: 136 ARQWVATPDESHHVSGKAVDI 156
>gi|107024163|ref|YP_622490.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Burkholderia cenocepacia AU 1054]
gi|116688510|ref|YP_834133.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Burkholderia cenocepacia HI2424]
gi|105894352|gb|ABF77517.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Burkholderia cenocepacia AU 1054]
gi|116646599|gb|ABK07240.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia cenocepacia HI2424]
Length = 281
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQHGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGTNVTNAAAFQSYHQFGLAAD 220
>gi|319796171|ref|YP_004157811.1| peptidase m15b and m15c dD-carboxypeptidase vany/endolysin
[Variovorax paradoxus EPS]
gi|315598634|gb|ADU39700.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Variovorax paradoxus EPS]
Length = 281
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L+ + A +S H G A D
Sbjct: 186 GYRSPERQAKLAALGNTVTLAKANQSYHQYGLAAD 220
>gi|170731813|ref|YP_001763760.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia cenocepacia MC0-3]
gi|254246484|ref|ZP_04939805.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|124871260|gb|EAY62976.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|169815055|gb|ACA89638.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Burkholderia cenocepacia MC0-3]
Length = 281
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + +L GYR+ E L++
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQHGY--EMALLEGYRSPERQNRLAQ 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 MGTNVTNAAAFQSYHQFGLAAD 220
>gi|319786779|ref|YP_004146254.1| hypothetical protein Psesu_1174 [Pseudoxanthomonas suwonensis 11-1]
gi|317465291|gb|ADV27023.1| hypothetical protein Psesu_1174 [Pseudoxanthomonas suwonensis 11-1]
Length = 581
Score = 35.9 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ + S RT E N L A S H+ G A+D
Sbjct: 255 LRVTSQTRTPEENARLP----NAAPNSHHLTGNALDI 287
>gi|301347838|ref|ZP_07228579.1| hypothetical protein AbauAB0_16355 [Acinetobacter baumannii AB056]
gi|301597644|ref|ZP_07242652.1| hypothetical protein AbauAB059_17553 [Acinetobacter baumannii
AB059]
Length = 203
Score = 35.9 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 21/85 (24%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI-PGVSLRSLYKIAI------- 175
+ S YR N+ A S+H+ A+DF I P V Y
Sbjct: 124 FEVTSVYRDLPLNE-----CAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLC 178
Query: 176 --RLKRG-----GVGYY-SKFLHID 192
+ G G+G Y S +HID
Sbjct: 179 QFWAQHGQSLNLGIGLYSSGQIHID 203
>gi|115350448|ref|YP_772287.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Burkholderia ambifaria AMMD]
gi|115280436|gb|ABI85953.1| peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
[Burkholderia ambifaria AMMD]
Length = 242
Score = 35.9 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L++
Sbjct: 110 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAQ 159
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 160 MGTNVTNAAAFQSYHQFGLATD 181
>gi|194291790|ref|YP_002007697.1| hypothetical protein RALTA_B1032 [Cupriavidus taiwanensis LMG
19424]
gi|193225694|emb|CAQ71640.1| conserved hypothetical protein, putative transmembrane protein,
putative peptidase [Cupriavidus taiwanensis LMG 19424]
Length = 285
Score = 35.9 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 23/156 (14%)
Query: 16 GLYVSVASFFVTSPIYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKA----- 70
L ++ A P+ +L+ L D + + + + + G +
Sbjct: 78 ALVLAAAGVVTLPPVLALA--LRHRQVFQFEDDDGVREPDPQIAALLN---GERLVPPPP 132
Query: 71 ---IVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYIL 127
V R + + + + + DW + +L ++ + +L
Sbjct: 133 LPPEVFTTREVELVRPAIREAS---RDWEQLD-AEFRQRLLLVYKIMRDEHGY--EMALL 186
Query: 128 SGYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L+ + A S H G A D
Sbjct: 187 EGYRSPERQAKLAAMGSHVTQAGAYHSYHQFGLAAD 222
>gi|224532729|ref|ZP_03673346.1| putative carboxypeptidase [Borrelia burgdorferi WI91-23]
gi|224512347|gb|EEF82731.1| putative carboxypeptidase [Borrelia burgdorferi WI91-23]
Length = 262
Score = 35.9 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKML-----SRRNRKIAR-------KSQHVLGK 156
D + I+ I I S YRTQE K L RK+A SQH +G
Sbjct: 111 DLIRLIKDAKKFGIEIKIKSAYRTQEYQKFLFDYNVKTYGRKVAETQSAIPGHSQHHMGT 170
Query: 157 AVDF 160
A+DF
Sbjct: 171 AMDF 174
>gi|216264599|ref|ZP_03436591.1| putative carboxypeptidase [Borrelia burgdorferi 156a]
gi|218249366|ref|YP_002375090.1| putative carboxypeptidase [Borrelia burgdorferi ZS7]
gi|226321888|ref|ZP_03797414.1| putative carboxypeptidase [Borrelia burgdorferi Bol26]
gi|215981072|gb|EEC21879.1| putative carboxypeptidase [Borrelia burgdorferi 156a]
gi|218164554|gb|ACK74615.1| putative carboxypeptidase [Borrelia burgdorferi ZS7]
gi|226233077|gb|EEH31830.1| putative carboxypeptidase [Borrelia burgdorferi Bol26]
Length = 262
Score = 35.9 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKML-----SRRNRKIAR-------KSQHVLGK 156
D + I+ I I S YRTQE K L RK+A SQH +G
Sbjct: 111 DLIRLIKDAKKFGIEIKIKSAYRTQEYQKFLFDYNVKTYGRKVAETQSAIPGHSQHHMGT 170
Query: 157 AVDF 160
A+DF
Sbjct: 171 AMDF 174
>gi|114764053|ref|ZP_01443292.1| hypothetical protein 1100011001333_R2601_15382 [Pelagibaca
bermudensis HTCC2601]
gi|114543411|gb|EAU46426.1| hypothetical protein R2601_15382 [Roseovarius sp. HTCC2601]
Length = 309
Score = 35.9 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-------------------IPGVSL 167
++G R +R NR + S+H G+A+D G +L
Sbjct: 209 VAGLRVAAHYACRTRNNRPGGKISEHGKGRAIDISGVMLRDGSEISVLRDWGGGAKGRAL 268
Query: 168 RSLYKIA-----IRLKRGGVGYYSKFLHIDVGRVRS 198
R +++ A L G GY+ LH D R RS
Sbjct: 269 RQMHRTACGPFGTVLGPGSDGYHRDHLHFDTARHRS 304
>gi|51596187|ref|YP_070378.1| bacteriophage P7 related protein [Yersinia pseudotuberculosis IP
32953]
gi|51589469|emb|CAH21091.1| bacteriophage P7 related protein [Yersinia pseudotuberculosis IP
32953]
Length = 131
Score = 35.9 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + +++ P ++ G RT E + L + S+H+ G AVD
Sbjct: 22 DLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDI 74
>gi|216263589|ref|ZP_03435584.1| putative carboxypeptidase [Borrelia afzelii ACA-1]
gi|215980433|gb|EEC21254.1| putative carboxypeptidase [Borrelia afzelii ACA-1]
Length = 262
Score = 35.9 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKML------------SRRNRKIARKSQHVLGK 156
D + I+ I I S YRTQE K L + I SQH +G
Sbjct: 111 DLIQLIKDAKKNGIEIKIKSAYRTQEYQKFLFDYNVKTYGEKVAETQSAIPGHSQHHMGT 170
Query: 157 AVDF 160
A+DF
Sbjct: 171 AIDF 174
>gi|111115410|ref|YP_710028.1| hypothetical protein BAPKO_0613 [Borrelia afzelii PKo]
gi|110890684|gb|ABH01852.1| hypothetical protein BAPKO_0613 [Borrelia afzelii PKo]
Length = 262
Score = 35.9 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 109 DFLWEIQQYFSVPEYIYILSGYRTQETNKML------------SRRNRKIARKSQHVLGK 156
D + I+ I I S YRTQE K L + I SQH +G
Sbjct: 111 DLIQLIKDAKKNGIEIKIKSAYRTQEYQKFLFDYNVKTYGKKVAETQSAIPGHSQHHMGT 170
Query: 157 AVDF 160
A+DF
Sbjct: 171 AIDF 174
>gi|52080654|ref|YP_079445.1| putative carboxypeptidase [Bacillus licheniformis ATCC 14580]
gi|52786028|ref|YP_091857.1| YodJ [Bacillus licheniformis ATCC 14580]
gi|319645387|ref|ZP_07999619.1| YodJ protein [Bacillus sp. BT1B_CT2]
gi|52003865|gb|AAU23807.1| putative carboxypeptidase [Bacillus licheniformis ATCC 14580]
gi|52348530|gb|AAU41164.1| YodJ [Bacillus licheniformis ATCC 14580]
gi|317392273|gb|EFV73068.1| YodJ protein [Bacillus sp. BT1B_CT2]
Length = 273
Score = 35.9 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 73 TFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLF--DFLWEIQQYFSVPE----YIYI 126
+ Y L+ + D + D+D + + +++ FS + +
Sbjct: 93 EYALPGNYAPSDLT-----VPDVAFSFTEDIDKRYIRKEAAKALEEMFSAAKKEGYELVA 147
Query: 127 LSGYRTQE-----TNKMLSRRNRKIAR-------KSQHVLGKAVDF 160
+SGYR+ + N +S++ + A+ +S+H G A+D
Sbjct: 148 VSGYRSYDRQKAIYNNEVSQKGEEKAKEAVAYPGQSEHQTGLAMDI 193
>gi|319401885|ref|NP_001187596.1| ribonuclease h2 subunit b [Ictalurus punctatus]
gi|308323458|gb|ADO28865.1| ribonuclease h2 subunit b [Ictalurus punctatus]
Length = 307
Score = 35.9 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 10/95 (10%)
Query: 30 IYSLSPDLIKYHQQSSMSSDLLDQEEVRTLKIYVVSTGSKAIVTFKRG--SQYNQEGLSQ 87
++ + + S++ LD + +++ +TG+ + F RG Y + +
Sbjct: 9 AHTSNDSWVVIAADSALDKTKLDDGDPTFIRLRNPATGAASQYLFSRGDVRLYEVKAFVE 68
Query: 88 --LNRLL-----YDWHSKQSIDMDPQLFDFLWEIQ 115
+ + D MDP LF L +Q
Sbjct: 69 DFHSWFIDQTVQRDGRLLYVTPMDP-LFLLLPYLQ 102
>gi|331698073|ref|YP_004334312.1| Hedgehog, N-terminal signaling domain-containing protein
[Pseudonocardia dioxanivorans CB1190]
gi|326952762|gb|AEA26459.1| Hedgehog, N-terminal signaling domain protein [Pseudonocardia
dioxanivorans CB1190]
Length = 1703
Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
M P+L + + + + + G R + T + + + S H G+A D +
Sbjct: 1614 MTPRLAELVGVLAAHVAQAFP-----GRRLRLTEAW--DPDGEHSHSSLHYEGRAADLTV 1666
Query: 163 PGVSLRSLYK-IAIRLKRGG--VGYYSKFLHI 191
L + A+ ++ G V + + +H+
Sbjct: 1667 DDRDRAKLGRLAALAVQTGFDWVLHENDHVHV 1698
>gi|53715119|ref|YP_101111.1| hypothetical protein BF3835 [Bacteroides fragilis YCH46]
gi|52217984|dbj|BAD50577.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 160
Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Query: 120 VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
I I SGYR + N + +R S H G A D
Sbjct: 57 GTAGIRISSGYRGPKLNAAV-----GGSRTSAHCHGYAFDL 92
>gi|318605402|emb|CBY26900.1| bacteriophage P7 related protein [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 131
Score = 35.5 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 109 DFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
D + +++ P ++ G RT E + L + S+H+ G AVD
Sbjct: 22 DLVKVVRRALEITPIDFKVIEGCRTVERQRELVKDGASQTMNSRHLTGHAVDI 74
>gi|330815365|ref|YP_004359070.1| Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia gladioli BSR3]
gi|327367758|gb|AEA59114.1| Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
[Burkholderia gladioli BSR3]
Length = 283
Score = 35.5 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 82 QEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSR 141
++ N L D+ + +L + + + + +L GYR+ E L+
Sbjct: 149 KDASRDWNLLDPDFRT--------RLLLVYKIMHEQYGY--EMALLEGYRSPERQNRLAA 198
Query: 142 RNRKI----ARKSQHVLGKAVD 159
+ A +S H G A D
Sbjct: 199 IGSNVTNAAAYQSYHQFGLASD 220
>gi|325955391|ref|YP_004239051.1| hypothetical protein Weevi_1783 [Weeksella virosa DSM 16922]
gi|323438009|gb|ADX68473.1| hypothetical protein Weevi_1783 [Weeksella virosa DSM 16922]
Length = 242
Score = 35.5 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 103 MDPQLFDFLWEIQQYF--SVPEYIYILSGYRTQETNKMLSRRNRKIAR-KSQHVLGKAVD 159
++P L L EI F + I S RTQET L R N A+ S H G A D
Sbjct: 117 IEPALV-VLEEISTRFYAENNRKLSISSLTRTQETQSKLRRVNSNAAKGNSSHEYGAAFD 175
Query: 160 F 160
Sbjct: 176 I 176
>gi|169334857|ref|ZP_02862050.1| hypothetical protein ANASTE_01263 [Anaerofustis stercorihominis DSM
17244]
gi|169257595|gb|EDS71561.1| hypothetical protein ANASTE_01263 [Anaerofustis stercorihominis DSM
17244]
Length = 250
Score = 35.5 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 12/63 (19%)
Query: 110 FLWEIQQYFSVPEYIYILSGYRTQE-----TNKMLSRRNR-------KIARKSQHVLGKA 157
L E+ + I +SGYRT E N L+ + S+H G A
Sbjct: 52 ILKELLFEIGSTDEIAYVSGYRTLEEQIEIYNNSLNENGEDFTNKYVALPGHSEHQTGFA 111
Query: 158 VDF 160
+D
Sbjct: 112 IDL 114
>gi|327191963|gb|EGE58944.1| hypothetical protein RHECNPAF_2530017 [Rhizobium etli CNPAF512]
Length = 206
Score = 35.5 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 24/86 (27%)
Query: 89 NRLLYDWHSKQSIDM--------DPQLF---------DFLWEIQQYFSVPEYIYILSGYR 131
N D+ + D DP L D L ++ F ++I SGYR
Sbjct: 22 NFFFRDFLHSEIADFYRIPNIPEDPDLAIEAGRRLCEDLLEPLEATFGR---LHIRSGYR 78
Query: 132 TQETNKMLSRR----NRKIARKSQHV 153
+ + N+ + + A + H+
Sbjct: 79 SPDVNRFGNENKLNCSTNAATSAHHI 104
>gi|304406557|ref|ZP_07388213.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Paenibacillus curdlanolyticus YK9]
gi|304344615|gb|EFM10453.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Paenibacillus curdlanolyticus YK9]
Length = 206
Score = 35.5 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 97 SKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRK-----IAR--- 148
+ Q + Q D L + + + I I G+R+ L R+ R + +
Sbjct: 58 TAQLHPIVRQQADELVRLAKKQGIR--ILITDGFRSAAEQDALYRKGRSDDGSIVTKAKG 115
Query: 149 -KSQHVLGKAVDFYI 162
+S H G AVDF +
Sbjct: 116 GQSYHNFGLAVDFAL 130
>gi|301167884|emb|CBW27469.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 277
Score = 35.5 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 113 EIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
EI+ + + S YR N+ L A++S H+ KA+D +
Sbjct: 159 EIEDQTGISTT--LTSHYRGSCYNEKL-----GGAKESDHISAKAMDISM 201
>gi|317056281|ref|YP_004104748.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Ruminococcus albus 7]
gi|315448550|gb|ADU22114.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Ruminococcus albus 7]
Length = 286
Score = 35.5 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 122 EYIYILSGYRTQETNKML---SRRNRKIARK-SQHVLGKAVDFYIPGVSLRSLYK--IAI 175
E +Y++S YRT E + L + + S+H G A D Y G + +++
Sbjct: 124 EPLYVMSSYRTPEEQQELYEDQGSSEAMPPHCSEHETGLAQDLYFSGFAGKNINDCPAGK 183
Query: 176 RL-----KRGGVGYYSKFLHIDVG 194
L + G + Y F + G
Sbjct: 184 YLTEHAHEYGFIVRYPSFGRMVTG 207
>gi|237738317|ref|ZP_04568798.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229420197|gb|EEO35244.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 165
Score = 35.5 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
L E+++ + + S +R+ N+ + + S H G AVD +
Sbjct: 69 LDEVREILG--RPVVVSSWFRSARLNRAVGGSSS-----SGHRKGMAVDIIL 113
>gi|196015879|ref|XP_002117795.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190579680|gb|EDV19771.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 248
Score = 35.5 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 124 IYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
+YI S YR N +S + A +S H++G A+D +
Sbjct: 138 VYITSSYRA---NADVSGAIVQPASRSNHMIGHAIDMNV 173
>gi|300693697|ref|YP_003749670.1| carboxypeptidase [Ralstonia solanacearum PSI07]
gi|299075734|emb|CBJ35038.1| putative carboxypeptidase [Ralstonia solanacearum PSI07]
Length = 270
Score = 35.2 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E + L+ + A +S H G A D
Sbjct: 175 GYRSPERQEKLAAMGSNVTQATAFQSYHQYGLAAD 209
>gi|329890219|ref|ZP_08268562.1| endolysin [Brevundimonas diminuta ATCC 11568]
gi|328845520|gb|EGF95084.1| endolysin [Brevundimonas diminuta ATCC 11568]
Length = 127
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ P L + P + G RT L R S+H+ G AVD
Sbjct: 16 VHPDLVAVVEA--AILLTPVDFMVTEGLRTPARQAELVRAGASRTLNSRHLTGHAVDV 71
>gi|299069131|emb|CBJ40383.1| putative carboxypeptidase [Ralstonia solanacearum CMR15]
Length = 282
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E + L+ + A +S H G A D
Sbjct: 187 GYRSPERQEKLAAMGSNVTQATAFQSYHQYGLAAD 221
>gi|295702496|ref|YP_003595571.1| cell wall carboxypeptidase [Bacillus megaterium DSM 319]
gi|294800155|gb|ADF37221.1| cell wall carboxypeptidase [Bacillus megaterium DSM 319]
Length = 173
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNR---------KIARKSQHVLGKAVDFYI 162
+QQ I I G+R++E L + R +S H G A+DF I
Sbjct: 54 VQQASDQGISIVITEGFRSKEEQDKLYAKGRTEEGNIVTYSKGGQSYHNYGLAIDFAI 111
>gi|294497130|ref|YP_003560830.1| cell wall carboxypeptidase [Bacillus megaterium QM B1551]
gi|294347067|gb|ADE67396.1| cell wall carboxypeptidase [Bacillus megaterium QM B1551]
Length = 173
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 114 IQQYFSVPEYIYILSGYRTQETNKMLSRRNR---------KIARKSQHVLGKAVDFYI 162
+QQ I I G+R++E L + R +S H G A+DF I
Sbjct: 54 VQQASDQGISIVITEGFRSKEEQDKLYAKGRTEEGNIVTYSKGGQSYHNYGLAIDFAI 111
>gi|17548987|ref|NP_522327.1| hypothetical protein RS01942 [Ralstonia solanacearum GMI1000]
gi|17431237|emb|CAD17917.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 282
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E + L+ + A +S H G A D
Sbjct: 187 GYRSPERQEKLAAMGSNVTQATAFQSYHQYGLAAD 221
>gi|254514372|ref|ZP_05126433.1| transporter, AcrB/D/F family [gamma proteobacterium NOR5-3]
gi|219676615|gb|EED32980.1| transporter, AcrB/D/F family [gamma proteobacterium NOR5-3]
Length = 1017
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQY---FSVPEYIY-ILSGYRTQETNKMLSRRNR 144
+ +S +D D + ++Q + ++SGYRT N +L RNR
Sbjct: 753 RASESERVD---VDAIRDVQIWSAVLGKTVPASSVISGYRTDWENALLRGRNR 802
>gi|99082065|ref|YP_614219.1| kynureninase [Ruegeria sp. TM1040]
gi|99038345|gb|ABF64957.1| Kynureninase [Ruegeria sp. TM1040]
Length = 396
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 96 HSKQSIDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLG 155
+++DP L + + YR T + L I + S +L
Sbjct: 224 RPDIVLEVDPAL-------AGWLGHDAPFAMEPDYRPAMTTERLRVGTPSIVQLS--ILD 274
Query: 156 KAVDFYIPGVSLRSLYKIAIRL 177
A+D + GVS+ + ++ L
Sbjct: 275 TALDVW-DGVSMEEIRGASVAL 295
>gi|322706194|gb|EFY97775.1| polyketide synthase, putative [Metarhizium anisopliae ARSEF 23]
Length = 2551
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 60 KIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS 119
+Y +TG + G + ++ ++ + + + MDPQ L +
Sbjct: 83 HLYHPATG-HIGSIYSNGGYFLKDDINNFDSAFFQLPENDVVAMDPQQKMLLESVYHALE 141
>gi|190889935|ref|YP_001976477.1| hypothetical protein RHECIAT_CH0000305 [Rhizobium etli CIAT 652]
gi|190695214|gb|ACE89299.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 205
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 24/86 (27%)
Query: 89 NRLLYDWHSKQSIDM--------DPQLF---------DFLWEIQQYFSVPEYIYILSGYR 131
N D+ + D DP L D L ++ F ++I SGYR
Sbjct: 21 NFFFRDFLHSEIADFYRIPNIPEDPDLAIEAGKRLCEDLLEPLEATFGR---LHIRSGYR 77
Query: 132 TQETNKMLSRR----NRKIARKSQHV 153
+ + N+ + + A + H+
Sbjct: 78 SPDVNRFGNENKLNCSTNAATSAHHI 103
>gi|193062837|ref|ZP_03043930.1| hypothetical phage-related protein [Escherichia coli E22]
gi|192931480|gb|EDV84081.1| hypothetical phage-related protein [Escherichia coli E22]
Length = 112
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 106 QLFDFLWEIQQYFSVPEYIYILSG--YRTQETNKMLSRRNRKIARKSQHVLGKAVDFYI 162
QLF + +F+ + + G YRT E + +++ I S H AVDF +
Sbjct: 8 QLFTVMIASLIHFAQEKGYRLTFGEAYRTPEQAALNAKKGSGIT-NSLHTQRLAVDFNL 65
>gi|108757842|ref|YP_631599.1| D-alanyl-D-alanine carboxypeptidase family protein [Myxococcus
xanthus DK 1622]
gi|108461722|gb|ABF86907.1| D-alanyl-D-alanine carboxypeptidase family protein [Myxococcus
xanthus DK 1622]
Length = 202
Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 126 ILSGYRTQETNKML-----SRRNRKIAR--KSQHVLGKAVDFYIPGVSLR 168
+ SGYR+ + L + + AR +S H G AVD I GV
Sbjct: 91 VHSGYRSPAKQRRLYERYRKGKGPQAARPGRSNHQRGLAVDLVIGGVKTP 140
>gi|291542821|emb|CBL15931.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus bromii L2-63]
Length = 259
Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 15/84 (17%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQE-----TNKMLSRRNRKIAR-------KSQHVLGKAV 158
L I Q S I +SGYRT E N L + R S+H G A+
Sbjct: 53 LQLIFQKISSGNAIVPVSGYRTLEEQVNIYNTSLKDNGEEFTRKYVALPNHSEHQTGLAI 112
Query: 159 DFYIPGVSLRSLYKIAIRLKRGGV 182
D G++ + I GG+
Sbjct: 113 DL---GLNKPDIDFIRPDFPYGGI 133
>gi|311108871|ref|YP_003981724.1| D-alanyl-D-alanine carboxypeptidase [Achromobacter xylosoxidans A8]
gi|310763560|gb|ADP19009.1| D-alanyl-D-alanine carboxypeptidase family protein 2 [Achromobacter
xylosoxidans A8]
Length = 283
Score = 35.2 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 123 YIYILSGYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
+ ++ GYR+ + L++ + A +S H G A D
Sbjct: 179 EMVLIEGYRSPDRQAELAKMGSHVTNAGAYQSYHQFGLAAD 219
>gi|290476932|ref|YP_003469843.1| hypothetical protein XBJ1_3963 [Xenorhabdus bovienii SS-2004]
gi|289176276|emb|CBJ83081.1| 19 [Xenorhabdus bovienii SS-2004]
Length = 132
Score = 35.2 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 89 NRLLYDWHSKQSIDMDPQLFDFLWEIQQYFS-VPEYIYILSGYRTQETNKMLSRRNRKIA 147
N L + P D + +++ + P ++ G RT E L +
Sbjct: 5 NFKLSQRSENNLKGIHP---DLVAVVRRALALSPVDFTVIEGLRTLERQTQLVAEKKSRT 61
Query: 148 RKSQHVLGKAVDF 160
S+H+ G AVD
Sbjct: 62 MNSRHLTGHAVDL 74
>gi|322437234|ref|YP_004219446.1| hypothetical protein AciX9_3665 [Acidobacterium sp. MP5ACTX9]
gi|321164961|gb|ADW70666.1| hypothetical protein AciX9_3665 [Acidobacterium sp. MP5ACTX9]
Length = 318
Score = 34.8 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 121 PEYIYILSGYRTQETNKMLSRRNRKIARK-----SQHVLGKAVDFYIPGVSLRSLYKI 173
+ + S RT E + L R N A S H+ G+AVD G+S + +
Sbjct: 203 HSPLQVNSAVRTVEFQQKLLRINGNAAPAEGDTASPHLTGQAVDIAKHGLSATEIAWM 260
>gi|118472948|ref|YP_886266.1| D-alanyl-D-alanine carboxypeptidase family protein [Mycobacterium
smegmatis str. MC2 155]
gi|118174235|gb|ABK75131.1| D-alanyl-D-alanine carboxypeptidase family protein [Mycobacterium
smegmatis str. MC2 155]
Length = 185
Score = 34.8 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 14/81 (17%)
Query: 94 DWHSKQSIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQET------NKMLSRRNRKI 146
D +DP+L + + + + SG+R+ N + + +
Sbjct: 57 DLQQPAIAKLDPRLLAAVQNAANAAAAEGITMTVTSGWRSPAFQQTLLDNAVQTYGSLAA 116
Query: 147 ARK-------SQHVLGKAVDF 160
AR+ S+HV G+AVD
Sbjct: 117 AREYVQTPTASRHVTGEAVDI 137
>gi|260429559|ref|ZP_05783536.1| extensin family protein [Citreicella sp. SE45]
gi|260420182|gb|EEX13435.1| extensin family protein [Citreicella sp. SE45]
Length = 312
Score = 34.8 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 24/96 (25%)
Query: 127 LSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDFY-------------------IPGVSL 167
++G R +R N+ A+ S+H G+A+D G SL
Sbjct: 211 VAGLRVAAHYACRTRNNQPGAKVSEHGKGRAIDIAGVRLKDGSEISVLRDWGRGAKGASL 270
Query: 168 RSLYKIAIR-----LKRGGVGYYSKFLHIDVGRVRS 198
+ ++ A R L G GY+ LH D R RS
Sbjct: 271 KRMHGSACRTFGTVLGPGSDGYHRDHLHFDTARHRS 306
>gi|331700118|ref|YP_004336357.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Pseudonocardia dioxanivorans CB1190]
gi|326954807|gb|AEA28504.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Pseudonocardia dioxanivorans CB1190]
Length = 219
Score = 34.8 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 29/99 (29%), Gaps = 22/99 (22%)
Query: 100 SIDMDPQLFDFLWEIQQYFSVPE-YIYILSGYRTQETNKML-----------SRRNRKIA 147
+DP L + + SG+R+ + L R +A
Sbjct: 90 VARLDPGLLASVRRAAADAGRSGIGFSVNSGWRSPRYQEQLLREAVATYGSEREAARWVA 149
Query: 148 R--KSQHVLGKAVDFYIPGVSLRSLYKIAIRLKRGGVGY 184
S HV G AVD + A L G GY
Sbjct: 150 TADTSPHVSGDAVDI--------GPAESAAWLSAHGAGY 180
>gi|300697376|ref|YP_003748037.1| carboxypeptidase [Ralstonia solanacearum CFBP2957]
gi|299074100|emb|CBJ53642.1| putative carboxypeptidase [Ralstonia solanacearum CFBP2957]
Length = 270
Score = 34.8 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKIAR----KSQHVLGKAVD 159
GYR+ E + L+ + + +S H G A D
Sbjct: 175 GYRSPERQEKLAAMGSNVTQATSFQSYHQYGLAAD 209
>gi|194015382|ref|ZP_03053998.1| M15C subfamily peptidase [Bacillus pumilus ATCC 7061]
gi|194012786|gb|EDW22352.1| M15C subfamily peptidase [Bacillus pumilus ATCC 7061]
Length = 272
Score = 34.8 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK---------SQHVLGKAVDFY 161
+ I+Q + ++ I SGYR+ L + R K S H G A+D+
Sbjct: 31 IEMIKQAYKEGIFVQITSGYRSFAEQNKLYAKGRTAPGKIVTNAKGGQSNHNYGLAIDYV 90
Query: 162 I 162
+
Sbjct: 91 L 91
>gi|83748130|ref|ZP_00945158.1| L-alanyl-D-glutamate peptidase [Ralstonia solanacearum UW551]
gi|83725212|gb|EAP72362.1| L-alanyl-D-glutamate peptidase [Ralstonia solanacearum UW551]
Length = 282
Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKIAR----KSQHVLGKAVD 159
GYR+ E + L+ + + +S H G A D
Sbjct: 187 GYRSPERQEKLAAMGSNVTQATSFQSYHQYGLAAD 221
>gi|311070930|ref|YP_003975853.1| YcdD protein [Bacillus atrophaeus 1942]
gi|310871447|gb|ADP34922.1| YcdD [Bacillus atrophaeus 1942]
Length = 167
Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 101 IDMDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK---------SQ 151
+ Q + L + + I I G+R+ E L ++ R S
Sbjct: 44 HPIVKQNTEILKAAAEKKGIS--IVITEGFRSIEEQNELYKQGRSKKGNIVTYAKGGESY 101
Query: 152 HVLGKAVDFYIPGVSLRSLYKI 173
H G A+DF + + L+ I
Sbjct: 102 HNYGLAIDFALQQKNGSLLWDI 123
>gi|149179707|ref|ZP_01858212.1| hypothetical protein BSG1_01790 [Bacillus sp. SG-1]
gi|148851899|gb|EDL66044.1| hypothetical protein BSG1_01790 [Bacillus sp. SG-1]
Length = 302
Score = 34.8 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 14/65 (21%)
Query: 108 FDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRN----------RKIAR--KSQHVLG 155
+ ++ Q + Y+ +SGYR+ + L +R + +A S+H G
Sbjct: 160 LEEMFAAAQEAGL--YLTAISGYRSYAYQEALLQREIKQFGEEKAVKAVAPPGNSEHQSG 217
Query: 156 KAVDF 160
A+D
Sbjct: 218 LAMDI 222
>gi|218662992|ref|ZP_03518922.1| hypothetical protein RetlI_28349 [Rhizobium etli IE4771]
Length = 143
Score = 34.8 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 28/94 (29%)
Query: 89 NRLLYDWHSKQSIDM--------DPQLF---------DFLWEIQQYFSVPEYIYILSGYR 131
N D+ + D DP L D L ++ F ++I SGYR
Sbjct: 40 NFFFRDFLHSEIADFYRIPNIPEDPDLAIEAGRRLCEDLLEPLEATFGR---LHIRSGYR 96
Query: 132 TQETNKMLSRR----NRKIARKSQHVLGKAVDFY 161
+ + N+ + + A + H+ D
Sbjct: 97 SPDVNRFGNENKLNCSTNAATAAHHI----WDIR 126
>gi|154684776|ref|YP_001419937.1| YcdD [Bacillus amyloliquefaciens FZB42]
gi|154350627|gb|ABS72706.1| YcdD [Bacillus amyloliquefaciens FZB42]
Length = 167
Score = 34.8 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 9/68 (13%)
Query: 123 YIYILSGYRTQETNKMLSRRNRKIARK---------SQHVLGKAVDFYIPGVSLRSLYKI 173
+ I G+R+ E L R+ R S H G A+DF + ++ +
Sbjct: 64 TVVITEGFRSIEEQNELYRQGRSKKGNIVTYAKGGESYHNYGLAIDFALQKKDGSLIWDM 123
Query: 174 AIRLKRGG 181
R G
Sbjct: 124 TYDGNRNG 131
>gi|50956510|gb|AAT90759.1| putative phage-related protein [Yersinia enterocolitica]
Length = 133
Score = 34.8 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 103 MDPQLFDFLWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
+ P L + + ++ G RT E + L R S+H+ G AVD
Sbjct: 21 IHPDLVLIVR--RALTLSTVDFRVIEGVRTSERQRQLVRNGSSKTLNSRHLTGHAVDL 76
>gi|309782731|ref|ZP_07677452.1| D-alanyl-D-alanine carboxypeptidase family protein [Ralstonia sp.
5_7_47FAA]
gi|308918509|gb|EFP64185.1| D-alanyl-D-alanine carboxypeptidase family protein [Ralstonia sp.
5_7_47FAA]
Length = 285
Score = 34.8 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKI----ARKSQHVLGKAVD 159
GYR+ E L+ + A +S H G A D
Sbjct: 187 GYRSPERQVKLAAMGSNVTQATAFQSYHQYGLAAD 221
>gi|207724489|ref|YP_002254886.1| hypothetical protein RSMK02773 [Ralstonia solanacearum MolK2]
gi|207739130|ref|YP_002257523.1| hypothetical protein RSIPO_03828 [Ralstonia solanacearum IPO1609]
gi|206589710|emb|CAQ36671.1| hypothetical protein RSMK02773 [Ralstonia solanacearum MolK2]
gi|206592503|emb|CAQ59409.1| hypothetical protein RSIPO_03828 [Ralstonia solanacearum IPO1609]
Length = 264
Score = 34.4 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 129 GYRTQETNKMLSRRNRKIAR----KSQHVLGKAVD 159
GYR+ E + L+ + + +S H G A D
Sbjct: 169 GYRSPERQEKLAAMGSNVTQATSFQSYHQYGLAAD 203
>gi|157693492|ref|YP_001487954.1| M15C subfamily peptidase [Bacillus pumilus SAFR-032]
gi|157682250|gb|ABV63394.1| M15C subfamily peptidase [Bacillus pumilus SAFR-032]
Length = 274
Score = 34.4 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 111 LWEIQQYFSVPEYIYILSGYRTQETNKMLSRRNRKIARK---------SQHVLGKAVDFY 161
+ I+Q + ++ I SGYR+ L + R K S H G A+D+
Sbjct: 31 IEMIKQAYKEGIFVQITSGYRSFAEQNKLYAQGRTAPGKIVTNAKGGQSNHNYGLAIDYV 90
Query: 162 I 162
+
Sbjct: 91 L 91
>gi|224024226|ref|ZP_03642592.1| hypothetical protein BACCOPRO_00949 [Bacteroides coprophilus DSM
18228]
gi|224017448|gb|EEF75460.1| hypothetical protein BACCOPRO_00949 [Bacteroides coprophilus DSM
18228]
Length = 170
Score = 34.4 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 10/59 (16%)
Query: 107 LFDFLWEIQQYFSVPE-----YIYILSGYRTQETNKMLSRRNRKIARKSQHVLGKAVDF 160
L D L E + S + I I SGYR +E N+ + + S H G A D
Sbjct: 39 LLDPLREAWEACSRKQGWGTPAIRISSGYRCRELNRAV-----GGSVTSAHRYGYAFDL 92
>gi|154249782|ref|YP_001410607.1| RluA family pseudouridine synthase [Fervidobacterium nodosum
Rt17-B1]
gi|154153718|gb|ABS60950.1| pseudouridine synthase, RluA family [Fervidobacterium nodosum
Rt17-B1]
Length = 314
Score = 34.4 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 58 TLKIYVVSTGSKAIVTFKRGSQYNQEGLSQLNRLLY 93
+L Y TG K K + +E + +L+ +
Sbjct: 275 SLSFYHPRTGEKVKFIAKIPQDF-KEAIQKLDDFIR 309
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.161 0.528
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,164,642,680
Number of Sequences: 14124377
Number of extensions: 199344941
Number of successful extensions: 477880
Number of sequences better than 10.0: 1145
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 626
Number of HSP's that attempted gapping in prelim test: 474616
Number of HSP's gapped (non-prelim): 1788
length of query: 200
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 68
effective length of database: 2,978,375,866
effective search space: 202529558888
effective search space used: 202529558888
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 78 (34.4 bits)