HHsearch alignment for GI: 254780964 and conserved domain: pfam00268
>pfam00268 Ribonuc_red_sm Ribonucleotide reductase, small chain.
Probab=100.00 E-value=0 Score=525.21 Aligned_cols=275 Identities=28% Similarity=0.468 Sum_probs=254.6
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74868899800017861679999999999457987036747989985202689989999999999999864333345566
Q gi|254780964|r 22 KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101 (352)
Q Consensus 22 ~~~~~~~~~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~ 101 (352)
T Consensus 1 e~~l~en~~r~--~PikYp~~~~~yk~~~~~fW~peEi~l~~D~~dw~~---Lt~~Er~~~~~iL~~~t~~D~~v~~~~~ 75 (281)
T pfam00268 1 EPLLRENSKRF--YPIQHPDIWELYKKAEANRWLAEEVDLSKDIPDWEK---LNEAEREFYSFVFAFLAAADGIVNENLA 75 (281)
T ss_pred CCCCCCCCCCC--CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99877861235--698585999999999977899621271411999987---9999999999999999999999998789
Q ss_pred HHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
Q ss_conf 640133057799999999999999778999999997146469---99999972001898778899999740121010267
Q gi|254780964|r 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMYREVPSITAKANWALQYTQTLSSPSFTTGT 178 (352)
Q Consensus 102 ~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~---e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~ 178 (352)
T Consensus 76 ~~~~~~~~~pE~~~~~~~q~~~E~IH~~sYs~il~tl~~d~~e~~~~f~~~~~~~~i~~k~~~~~~~~~----------- 144 (281)
T pfam00268 76 ERLSAEFQQKDILHYYGEQIAIENVHSEVYSLIQLTLFNDEKERDAYFNAIETDPAIQRKAQWLLRWVR----------- 144 (281)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_conf 999987784999999999999999999999999998738917899999999988999999999999852-----------
Q ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 77401499999999740001444114788998997598012899999998566666999999999765537542206789
Q gi|254780964|r 179 KDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQ 258 (352)
Q Consensus 179 ~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~ 258 (352)
T Consensus 145 --~~~~~~~~lva-~~~lEgi~f~s~Fa~~~~l~~~~~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~-----~~~~ 216 (281)
T pfam00268 145 --DAESLAEKLIA-FALVEGIFFSSSFASIAYLRKRGLMPGTCQSNELISRDEALHTDAACLLYNNYLGLE-----KPEP 216 (281)
T ss_pred --CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCH
T ss_conf --77079999999-999878999876899999997584344999999999989999999999999998735-----8549
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 999999999998768868875188847999899999999999999997887988999888325
Q gi|254780964|r 259 QKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 321 (352)
Q Consensus 259 ~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~nP~~ 321 (352)
T Consensus 217 ~~v~~~~~eave~E~~~~~~~~~~~~~gl~~~~~~~Yi~y~an~~L~~LG~~~~f~~-~NPf~ 278 (281)
T pfam00268 217 KRIYKLFREAVEIEIEFIEAAAPVDVHGMNVRAIKQYIEFSADRLLVAIGYKPLFNV-PNPFF 278 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCC
T ss_conf 999999999999999999986778838979999999999999999997799998999-89899