HHsearch results for GI: 254780964 and protein with PDBid: 1syy_A
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune evasion, replication; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 2ani_A
Probab=100.00 E-value=0 Score=656.12 Aligned_cols=344 Identities=56% Similarity=1.017 Sum_probs=331.5
Q ss_pred CCCHHCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 641000654578813374868899-8000178616799999999994579870367479899852026899899999999
Q gi|254780964|r 6 GLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84 (352)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~ 84 (352)
+.+++++|+++++.++|||++|++ |+++++|+||||+|++|++++++||+|+|||+++|++||++ ++||++||+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~PikYp~~~~~ykk~~~~fW~peEi~ls~D~~dw~~-~kL~~~er~~~~~ 80 (346)
T 1syy_A 2 QADILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS-DRLSEDERRVILL 80 (346)
T ss_dssp CCSSGGGGGGSCCGGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHS-SCSCHHHHHHHHH
T ss_pred CCCHHCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH-CCCCHHHHHHHHH
T ss_conf 741310545456711040258998765550898777999999999976998311075123988865-8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999864333345566640133057799999999999999778999999997146469999999720018987788999
Q gi|254780964|r 85 NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164 (352)
Q Consensus 85 ~l~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~~~~ 164 (352)
+|++|+.+|++|+.+++..+++.++.||+++++++|+++|+||++||++++++++++++++|+++.++|.+++|++++.+
T Consensus 81 ~l~~~~~~D~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~E~iHs~sYs~i~~~l~~d~~e~~~~~~~~~~i~~k~~~~~~ 160 (346)
T 1syy_A 81 NLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQME 160 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999989889983079989988380999999999999999999999999998568889999998405999999999998
Q ss_pred HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99740121010267774014999999997400014441147889989975980128999999985666669999999997
Q gi|254780964|r 165 YTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQ 244 (352)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~ 244 (352)
+++............+..+.++++++++++++||++|||||+++++|+++|+|+|++++|++|+|||++|+.|++.++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lEgi~f~s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~l~~~ 240 (346)
T 1syy_A 161 ITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLING 240 (346)
T ss_dssp TTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 66410033311023100899999999999999999999999999999877998544998778614578899999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 65537542206789999999999998768868875188847999899999999999999997887988999888325789
Q gi|254780964|r 245 IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 324 (352)
Q Consensus 245 l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~nP~~W~~ 324 (352)
+++|+|+++++++.+++++++++||++|++|++++|+.|++||+++++++||+|+||+||.+||++|+|++ +||+|||+
T Consensus 241 l~~e~~~~~~~~~~~~i~~l~~~ave~E~~~~~~~~~~~~~Gl~~~~~~~Yv~y~an~rL~~lG~~~~f~~-~nP~~w~~ 319 (346)
T 1syy_A 241 IKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHT-KNPFPWMS 319 (346)
T ss_dssp HHHHCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHTTCCCSSCC-CCSCTTC-
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHH
T ss_conf 98519787568999999999999999999999985658878999999999999999999997799998999-99637899
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 971788675557667112210586778
Q gi|254780964|r 325 EVIDLKKEKNFFETRVTEYQQGAELKW 351 (352)
Q Consensus 325 ~~~~~~~~tnFFe~~~t~Y~k~~~~~~ 351 (352)
+.++++++|||||+|||+|+|+|.++|
T Consensus 320 ~~~~~~~~~nFFe~r~~~Y~k~~~~~~ 346 (346)
T 1syy_A 320 ETIDLNKEKNFFETRVIEYQHAASLTW 346 (346)
T ss_dssp ---------------------------
T ss_pred HHHCCCCCCCCCCCCHHCCCCCCCCCC
T ss_conf 863867776878897210454577889