HHsearch results for GI: 254780964 and protein with PDBid: 1syy_A

>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune evasion, replication; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 2ani_A
Probab=100.00  E-value=0  Score=656.12  Aligned_cols=344  Identities=56%  Similarity=1.017  Sum_probs=331.5

Q ss_pred             CCCHHCCCCCCCCHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             641000654578813374868899-8000178616799999999994579870367479899852026899899999999
Q gi|254780964|r    6 GLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR   84 (352)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~   84 (352)
                      +.+++++|+++++.++|||++|++ |+++++|+||||+|++|++++++||+|+|||+++|++||++ ++||++||+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~PikYp~~~~~ykk~~~~fW~peEi~ls~D~~dw~~-~kL~~~er~~~~~   80 (346)
T 1syy_A            2 QADILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS-DRLSEDERRVILL   80 (346)
T ss_dssp             CCSSGGGGGGSCCGGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHS-SCSCHHHHHHHHH
T ss_pred             CCCHHCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH-CCCCHHHHHHHHH
T ss_conf             741310545456711040258998765550898777999999999976998311075123988865-8999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999864333345566640133057799999999999999778999999997146469999999720018987788999
Q gi|254780964|r   85 NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ  164 (352)
Q Consensus        85 ~l~~~~~~D~~v~~~~~~~i~~~~~~~E~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~e~f~~~~~~~~i~~k~~~~~~  164 (352)
                      +|++|+.+|++|+.+++..+++.++.||+++++++|+++|+||++||++++++++++++++|+++.++|.+++|++++.+
T Consensus        81 ~l~~~~~~D~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~E~iHs~sYs~i~~~l~~d~~e~~~~~~~~~~i~~k~~~~~~  160 (346)
T 1syy_A           81 NLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQME  160 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTHHHHCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999989889983079989988380999999999999999999999999998568889999998405999999999998


Q ss_pred             HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99740121010267774014999999997400014441147889989975980128999999985666669999999997
Q gi|254780964|r  165 YTQTLSSPSFTTGTKDADQEFLQDLFVFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQ  244 (352)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~  244 (352)
                      +++............+..+.++++++++++++||++|||||+++++|+++|+|+|++++|++|+|||++|+.|++.++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lEgi~f~s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~l~~~  240 (346)
T 1syy_A          161 ITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLING  240 (346)
T ss_dssp             TTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             66410033311023100899999999999999999999999999999877998544998778614578899999999999


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             65537542206789999999999998768868875188847999899999999999999997887988999888325789
Q gi|254780964|r  245 IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS  324 (352)
Q Consensus       245 l~~E~p~l~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~nP~~W~~  324 (352)
                      +++|+|+++++++.+++++++++||++|++|++++|+.|++||+++++++||+|+||+||.+||++|+|++ +||+|||+
T Consensus       241 l~~e~~~~~~~~~~~~i~~l~~~ave~E~~~~~~~~~~~~~Gl~~~~~~~Yv~y~an~rL~~lG~~~~f~~-~nP~~w~~  319 (346)
T 1syy_A          241 IKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHT-KNPFPWMS  319 (346)
T ss_dssp             HHHHCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHTTCCCSSCC-CCSCTTC-
T ss_pred             HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHH
T ss_conf             98519787568999999999999999999999985658878999999999999999999997799998999-99637899


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             971788675557667112210586778
Q gi|254780964|r  325 EVIDLKKEKNFFETRVTEYQQGAELKW  351 (352)
Q Consensus       325 ~~~~~~~~tnFFe~~~t~Y~k~~~~~~  351 (352)
                      +.++++++|||||+|||+|+|+|.++|
T Consensus       320 ~~~~~~~~~nFFe~r~~~Y~k~~~~~~  346 (346)
T 1syy_A          320 ETIDLNKEKNFFETRVIEYQHAASLTW  346 (346)
T ss_dssp             ---------------------------
T ss_pred             HHHCCCCCCCCCCCCHHCCCCCCCCCC
T ss_conf             863867776878897210454577889