HHsearch results for GI: 254780964 and protein with PDBid: 3dhz_A
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A 1uzr_A*
Probab=100.00 E-value=0 Score=531.08 Aligned_cols=296 Identities=20% Similarity=0.299 Sum_probs=271.6
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHH
Q ss_conf 01786167999999999945798703674798998520268998999999999999986433334556664013305779
Q gi|254780964|r 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112 (352)
Q Consensus 33 ~l~p~kY~~~~~ly~k~~~~fW~peEi~l~~D~~dw~t~~~Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~i~~~~~~~E 112 (352)
+++-++|+|+.++|+|++++||+|+||||++|++||++ ||+.||++++++|++|+++|++|++++...+++.++.||
T Consensus 20 nwn~~~~~~~~~ly~k~~~~fW~p~Ei~l~~D~~dw~~---Lt~~Er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~~e 96 (329)
T 3dhz_A 20 NWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNK---MTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETMH 96 (329)
T ss_dssp CTTSCSSHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGCSSHH
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
T ss_conf 77768768899999999967999766381654998876---999999999999999999999998133887710257789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
Q ss_conf 9999999999999778999999997146469--99999972001898778899999740121010267774014999999
Q gi|254780964|r 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKDADQEFLQDLF 190 (352)
Q Consensus 113 ~~~~l~~q~~~E~iH~~sYs~il~~l~~~~~--e~f~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (352)
+++++++|+++|+||++|||+|+++++.+++ ++|+++.++|.+++|++++.++++.- . ...++
T Consensus 97 ~~~~~~~~~~~E~iHs~sYs~il~~l~~~~~~~~~f~~~~~~~~l~~k~~~~~~~~~~~-------------~-~~~~~- 161 (329)
T 3dhz_A 97 EEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYNGD-------------D-PLKKK- 161 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHTSS-------------C-HHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-------------H-HHHHH-
T ss_conf 99999999999999999999999871478358999998860738765578999986447-------------7-99999-
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99740001444114788998997598012899999998566666999999999765537542206789999999999998
Q gi|254780964|r 191 VFYVVFEGMWFYTGFAQILSLGRANKMVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL 270 (352)
Q Consensus 191 ~~~~~lEGi~Fys~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~E~p~l~~~~~~~~i~~~~~eave 270 (352)
++++++||++|||||+++++|+++|+|+|+|++|+||+|||++|+.|++.++++++++.|+++++++++++++++++||+
T Consensus 162 v~~~~lEGi~F~s~Fa~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eav~ 241 (329)
T 3dhz_A 162 VASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYE 241 (329)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999261999999977798834799999998548999999999999887776799888779999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76886887518884799989999999999999999788798899988---832578997178867555766711221058
Q gi|254780964|r 271 LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347 (352)
Q Consensus 271 ~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~lG~~~~f~~~~---nP~~W~~~~~~~~~~tnFFe~~~t~Y~k~~ 347 (352)
+|++|++++|++ +|++ +++++||+|+||+||.+||++|+|++.+ ||++|+...+++.+++||||+|||+|+||+
T Consensus 242 ~E~~~~~~~f~~--~gl~-~~i~~Yiky~an~rL~~lG~~~~f~~~~~~~~P~~~~~~~~~~~~~~nFFE~~~t~Y~~~~ 318 (329)
T 3dhz_A 242 NEIEYTEDIYDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENHDFFSGSGSSYVIGK 318 (329)
T ss_dssp HHHHHHHHHHTT--TTCH-HHHHHHHHHHHHHHHHHTTCCCSSCGGGCCCCHHHHHHHC---------------------
T ss_pred HHHHHHHHHHCC--CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCC
T ss_conf 999999998643--4636-9999999999999999779998889766789816699872056756787547633102135
Q ss_pred CC
Q ss_conf 67
Q gi|254780964|r 348 EL 349 (352)
Q Consensus 348 ~~ 349 (352)
..
T Consensus 319 ~~ 320 (329)
T 3dhz_A 319 AE 320 (329)
T ss_dssp --
T ss_pred CC
T ss_conf 56