HHsearch alignment for GI: 254780967 and conserved domain: COG2223

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism].
Probab=99.26  E-value=5.4e-11  Score=77.10  Aligned_cols=160  Identities=19%  Similarity=0.252  Sum_probs=112.0

Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9998-865766999999999981999889999999999999999999999998650828999999999999999851001
Q gi|254780967|r   11 MAIN-SLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN   89 (398)
Q Consensus        11 ~~~~-~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~   89 (398)
T Consensus       229 ~tFG~Fvgfs~~l~~~--~~~~fg~~~~~Ag~~a-~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~  305 (417)
T COG2223         229 ATFGGFVGFSAYLPMY--LVTQFGLSPVTAGLIA-FLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL  305 (417)
T ss_pred             HHHHHHHHHHHHHHHH--HHHHCCCCHHHHHHHH-HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999--9986498723188999-987889999985044443313534479999999999999997056


Q ss_pred             -------CHHH----HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -------1011----10022321001111111000123321000111122122331000111111111122221111110
Q gi|254780967|r   90 -------SFTG----MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI  158 (398)
Q Consensus        90 -------~~~~----l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr  158 (398)
T Consensus       306 ~~~~~~~~~~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~  380 (417)
T COG2223         306 TGFGHGGSFVVFVAVFLALFVFAGLGNGS----VFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYT  380 (417)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCCH----HEEECHHHHH-HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
T ss_conf             34466764399999999999991567630----0331318778-664678879988542566540489999998426379


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             14567888887777888761
Q gi|254780967|r  159 GIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus       159 ~~f~~~~~~~~~~~~~~~~~  178 (398)
T Consensus       381 ~~f~~~~~~~~~a~v~~~~~  400 (417)
T COG2223         381 GAFMLLLAFYLVALVLTWAL  400 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999