HHsearch alignment for GI: 254780967 and conserved domain: COG2271
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism].
Probab=100.00 E-value=1.2e-40 Score=240.54 Aligned_cols=369 Identities=19% Similarity=0.210 Sum_probs=271.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
Q ss_conf 69999999999819998899999999999999999999999986508289999999999999998510011011100223
Q gi|254780967|r 20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRL 99 (398)
Q Consensus 20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~ 99 (398)
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG-~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~ 125 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLG-ILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWV 125 (448)
T ss_pred HHHHCCHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 676306778874598989999-9999999999998887665214678754425879999999999862179999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2100111111100012332100011112212233100011111111112-222111111014567888887777888761
Q gi|254780967|r 100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQ-ATVALSGGWIGIFVCMGVITTFITLWYYIR 178 (398)
Q Consensus 100 l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~-~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~ 178 (398)
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98988527983778689987585456746887454442235057999999999754256567788789999999999999
Q ss_pred CCCCCCH------HHH--------CCCCCCC---CC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
Q ss_conf 6788640------221--------0111111---23-3310000000002567778876310014688876545543153
Q gi|254780967|r 179 FPETLDP------RDV--------RPLNLYA---IL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL 240 (398)
Q Consensus 179 ~pet~~~------~~~--------~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T Consensus 206 ~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~ 285 (448)
T COG2271 206 LRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF 285 (448)
T ss_pred HCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 47991114999878860682223332025788649999999997280999999999999999999864278999980187
Q ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHH
Q ss_conf 110-15889988657677889999985001565124688778889999999987325777640379989989999-9999
Q gi|254780967|r 241 GNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASF-QFGL 318 (398)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 318 (398)
T Consensus 286 s~~~a~~a~~lfE~agl~G~LL~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~--~~~~l~~~~l~~iGf~IyGP 363 (448)
T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPN--GSYLLDAILLFIIGFLIYGP 363 (448)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHH
T ss_conf 7777889999999976278899999887650466464999999999999998762877--55999999999999998359
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999985346-6769999999999999-9999999999998311799-9999999999999999999422000
Q gi|254780967|r 319 INSNFSSISMEPFS-HLAGTASSIFGFINTV-ISTILGIIIGQSFNGTTYP-ITIGFFGIAVSSFICILIVEKNQMF 392 (398)
Q Consensus 319 ~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (398)
T Consensus 364 q-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 364 Q-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred H-HHHHHHHHCCCCHHHCCCHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 9-999999842651743010202033488877488607763046753687515999999999999999999851510