HHsearch alignment for GI: 254780967 and conserved domain: COG2814

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism].
Probab=99.25  E-value=2.6e-11  Score=78.89  Aligned_cols=143  Identities=13%  Similarity=0.097  Sum_probs=48.5

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-CCCCHHHHCCCCCCCCCCC
Q ss_conf             999981999889999999999999999999999998650828999999999999999851-0011011100223210011
Q gi|254780967|r   27 KISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV-TINSFTGMLCMRLIQGIGG  105 (398)
Q Consensus        27 ~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~-~a~~~~~l~~~r~l~G~g~  105 (398)
T Consensus       237 ~L~~v~g~s~~~vs-~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~  314 (394)
T COG2814         237 FLESVAGFSVSAVS-LVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF  314 (394)
T ss_pred             HHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             99873599876889-99999989999987777640202-10669999999999999999983111999999999999986


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             11111000123321000111122122331000111111111122221111110145678888877778
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITL  173 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~  173 (398)
T Consensus       315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~~a~~  380 (394)
T COG2814         315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LGYAATGWVGAALLLLALL  380 (394)
T ss_pred             HHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHH
T ss_conf             3015678887502-4777437999999999999999999998999981-0357789999999999999