HHsearch alignment for GI: 254780967 and conserved domain: KOG0254
>KOG0254 consensus.
Probab=99.97 E-value=4.9e-28 Score=171.08 Aligned_cols=332 Identities=17% Similarity=0.183 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHHC-----CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 69999999999819-----998--89999999999999999999999998650828999999999999999851001101
Q gi|254780967|r 20 IILPCLPKISDSLH-----LSN--ENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT 92 (398)
Q Consensus 20 ~~~p~lp~i~~~l~-----~s~--~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~ 92 (398)
T Consensus 65 ~~s~~~~~~~~~~~~~~~~~~~~~~~~s-~i~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~i~~~iG~ii~~~a~~~~ 143 (513)
T KOG0254 65 GISGALDFLQRFASLYDLSTGEYSVRQG-LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY 143 (513)
T ss_pred CHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0378899998404323444304677767-999999999999999999999784339999999999999999999970499
Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf 11002232100111111100012332100011112212233100011111111112222111-11101456788888777
Q gi|254780967|r 93 GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFI 171 (398)
Q Consensus 93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~ 171 (398)
T Consensus 144 ~l~~GR~l~G~g~G~~~~~~piyisEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~-~~~~~~~Wr~~~~~~~i~~~~~ 222 (513)
T KOG0254 144 QLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG-TSKVYAGWRIPLGLALIPAVIL 222 (513)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHH
T ss_conf 999999998545278766336776303765268899999999999999999998662-0245655899999999999999
Q ss_pred HHHHHHHCCCCCCHHHHC--------------C---CCCCCCC----------------C-CCCCCCC----CCHHHHHH
Q ss_conf 788876167886402210--------------1---1111123----------------3-3100000----00002567
Q gi|254780967|r 172 TLWYYIRFPETLDPRDVR--------------P---LNLYAIL----------------H-SFSLIFK----HRASTLYN 213 (398)
Q Consensus 172 ~~~~~~~~pet~~~~~~~--------------~---~~~~~~~----------------~-~~~~~~~----~~~~~~~~ 213 (398)
T Consensus 223 ~~~-~~~~pesP~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~ 301 (513)
T KOG0254 223 ALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLL 301 (513)
T ss_pred HHH-HHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 999-9946788799998394999999999980998430577899999998898887520024765223477778999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77887631001468887654554315311015889988657677889999985001565124688778889999999987
Q gi|254780967|r 214 IANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ 293 (398)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (398)
T Consensus 302 l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~~~~~~~lvd~~GRr~lll~s~~~m~~~~~~~~~~~ 380 (513)
T KOG0254 302 LQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVG 380 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999985889999999999995468722-8999999999999999999999873541489987999999999999986
Q ss_pred HCCCCC-----CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 325777-----64037998998999999999999-9999985346-67699999999999999999999
Q gi|254780967|r 294 ITSNHP-----IHLLIFIAFFFLASFQFGLINSN-FSSISMEPFS-HLAGTASSIFGFINTVISTILGI 355 (398)
Q Consensus 294 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~ 355 (398)
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254 381 VFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 211036541137799999999999999998732478888860241778989999999998899999999