HHsearch alignment for GI: 254780967 and conserved domain: KOG0255

>KOG0255 consensus.
Probab=99.97  E-value=3.2e-28  Score=172.10  Aligned_cols=352  Identities=17%  Similarity=0.213  Sum_probs=198.3

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf             99819998899999999999999999999999986508289999999999999998510011011100223210011111
Q gi|254780967|r   29 SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAP  108 (398)
Q Consensus        29 ~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~  108 (398)
T Consensus       110 ~~~~c~~~~~~~-~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~  188 (521)
T KOG0255         110 WNLVCDSSTLVA-LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP  188 (521)
T ss_pred             HHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf             657415399999-9999999999999999998877437606999999999998899997330999999999999863108


Q ss_pred             CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             11000123321000111122122331000111111111122221111110145678888877778887616788640221
Q gi|254780967|r  109 RIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDV  188 (398)
Q Consensus       109 ~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~  188 (398)
T Consensus       189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~  263 (521)
T KOG0255         189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS  263 (521)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHH
T ss_conf             99999999852265576688999-87877999999999999987---2899999999999999999-9987658779998


Q ss_pred             C-----------C--------CCCCCCC-----------------CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             0-----------1--------1111123-----------------33100000000025677788763100146888765
Q gi|254780967|r  189 R-----------P--------LNLYAIL-----------------HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQ  232 (398)
Q Consensus       189 ~-----------~--------~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (398)
T Consensus       264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~~y~g--  340 (521)
T KOG0255         264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF-VFSLVYYG--  340 (521)
T ss_pred             HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHH-HHHHHHHH--
T ss_conf             387777999999987543555665888999988877665215663229999805899999999999999-98888977--


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             45543153110158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r  233 IYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA  312 (398)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (398)
T Consensus       341 l~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~  416 (521)
T KOG0255         341 LSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGL---LLFGWLPDDLGG-WLHWILPLLG  416 (521)
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCCC-HHHHHHHHHH
T ss_conf             864243036308899999999999998841213421418999999999999999---999998444420-6999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             999999999999999853466-76999999999999999999999999983-1179999999999999999999994220
Q gi|254780967|r  313 SFQFGLINSNFSSISMEPFSH-LAGTASSIFGFINTVISTILGIIIGQSFN-GTTYPITIGFFGIAVSSFICILIVEKNQ  390 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~-~~G~a~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (398)
T Consensus       417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~  496 (521)
T KOG0255         417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK  496 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999987725089989999999999999999999999999865546799999999999999999632215


Q ss_pred             HHH
Q ss_conf             003
Q gi|254780967|r  391 MFR  393 (398)
Q Consensus       391 ~~r  393 (398)
T Consensus       497 ~~~  499 (521)
T KOG0255         497 GKP  499 (521)
T ss_pred             CCC
T ss_conf             885