HHsearch alignment for GI: 254780967 and conserved domain: KOG0255
>KOG0255 consensus.
Probab=99.97 E-value=3.2e-28 Score=172.10 Aligned_cols=352 Identities=17% Similarity=0.213 Sum_probs=198.3
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf 99819998899999999999999999999999986508289999999999999998510011011100223210011111
Q gi|254780967|r 29 SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAP 108 (398)
Q Consensus 29 ~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~ 108 (398)
T Consensus 110 ~~~~c~~~~~~~-~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255 110 WNLVCDSSTLVA-LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred HHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf 657415399999-9999999999999999998877437606999999999998899997330999999999999863108
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 11000123321000111122122331000111111111122221111110145678888877778887616788640221
Q gi|254780967|r 109 RIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDV 188 (398)
Q Consensus 109 ~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~ 188 (398)
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHH
T ss_conf 99999999852265576688999-87877999999999999987---2899999999999999999-9987658779998
Q ss_pred C-----------C--------CCCCCCC-----------------CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 0-----------1--------1111123-----------------33100000000025677788763100146888765
Q gi|254780967|r 189 R-----------P--------LNLYAIL-----------------HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQ 232 (398)
Q Consensus 189 ~-----------~--------~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (398)
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~~y~g-- 340 (521)
T KOG0255 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF-VFSLVYYG-- 340 (521)
T ss_pred HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHH-HHHHHHHH--
T ss_conf 387777999999987543555665888999988877665215663229999805899999999999999-98888977--
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 45543153110158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r 233 IYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA 312 (398)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (398)
T Consensus 341 l~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ 416 (521)
T KOG0255 341 LSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGL---LLFGWLPDDLGG-WLHWILPLLG 416 (521)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCCC-HHHHHHHHHH
T ss_conf 864243036308899999999999998841213421418999999999999999---999998444420-6999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 999999999999999853466-76999999999999999999999999983-1179999999999999999999994220
Q gi|254780967|r 313 SFQFGLINSNFSSISMEPFSH-LAGTASSIFGFINTVISTILGIIIGQSFN-GTTYPITIGFFGIAVSSFICILIVEKNQ 390 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~-~~G~a~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (398)
T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999987725089989999999999999999999999999865546799999999999999999632215
Q ss_pred HHH
Q ss_conf 003
Q gi|254780967|r 391 MFR 393 (398)
Q Consensus 391 ~~r 393 (398)
T Consensus 497 ~~~ 499 (521)
T KOG0255 497 GKP 499 (521)
T ss_pred CCC
T ss_conf 885