HHsearch alignment for GI: 254780967 and conserved domain: PRK03612
>PRK03612 spermidine synthase; Provisional.
Probab=97.82 E-value=0.00023 Score=40.54 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=81.5
Q ss_pred HHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHH----HHCC-CCHHHH
Q ss_conf 99999998-19998899999999999999999999999986508289999---999999999998----5100-110111
Q gi|254780967|r 24 CLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMM---FGLVIHIISTFI----MVTI-NSFTGM 94 (398)
Q Consensus 24 ~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~---~g~~~~~i~~~~----~~~a-~~~~~l 94 (398)
T Consensus 36 ~~~~l~s~llG~sv~qfs-ivIg~~L~~mGlGs~lar~~~~~~~~~F~~iEl~lalig-g~s~~~l~~~fa~~~~~~~~l 113 (516)
T PRK03612 36 LLSTLASYLLGDSVLQFS-LIIGLYLFAMGVGALLSKYIRDDAAAGFVAVELLLALLG-GLSALILYAVFAFLGGQQLPL 113 (516)
T ss_pred HHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999540999999-999999999999999986630006788999999999998-879999999999765689999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHH
Q ss_conf 002232100111111100012332100011112212233100011111111112222111111-0145678888877778
Q gi|254780967|r 95 LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW-IGIFVCMGVITTFITL 173 (398)
Q Consensus 95 ~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW-r~~f~~~~~~~~~~~~ 173 (398)
T Consensus 114 ~~~~~~iG~LiG~EiPLl~rl~~~~~-~~~~~~~vg~v~a~DylGaliGsl~f~flLlP~lGl~~~~~-l~g~lN~~~al 191 (516)
T PRK03612 114 VLATLLIGLLIGMEIPLLMRILQRGR-DAHAGHNVATVLAADYLGALVGGLAFPFLLLPRLGLLRTAA-LTGSLNLLAAL 191 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf 99999999998527899999998622-00222467888867646788999999999987632678999-99999999999
Q ss_pred HHHHHC
Q ss_conf 887616
Q gi|254780967|r 174 WYYIRF 179 (398)
Q Consensus 174 ~~~~~~ 179 (398)
T Consensus 192 ~~~~~f 197 (516)
T PRK03612 192 VFLWLF 197 (516)
T ss_pred HHHHHH
T ss_conf 999986