HHsearch alignment for GI: 254780967 and conserved domain: PRK03612

>PRK03612 spermidine synthase; Provisional.
Probab=97.82  E-value=0.00023  Score=40.54  Aligned_cols=152  Identities=13%  Similarity=0.132  Sum_probs=81.5

Q ss_pred             HHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHH----HHCC-CCHHHH
Q ss_conf             99999998-19998899999999999999999999999986508289999---999999999998----5100-110111
Q gi|254780967|r   24 CLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMM---FGLVIHIISTFI----MVTI-NSFTGM   94 (398)
Q Consensus        24 ~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~---~g~~~~~i~~~~----~~~a-~~~~~l   94 (398)
T Consensus        36 ~~~~l~s~llG~sv~qfs-ivIg~~L~~mGlGs~lar~~~~~~~~~F~~iEl~lalig-g~s~~~l~~~fa~~~~~~~~l  113 (516)
T PRK03612         36 LLSTLASYLLGDSVLQFS-LIIGLYLFAMGVGALLSKYIRDDAAAGFVAVELLLALLG-GLSALILYAVFAFLGGQQLPL  113 (516)
T ss_pred             HHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999540999999-999999999999999986630006788999999999998-879999999999765689999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHH
Q ss_conf             002232100111111100012332100011112212233100011111111112222111111-0145678888877778
Q gi|254780967|r   95 LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW-IGIFVCMGVITTFITL  173 (398)
Q Consensus        95 ~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW-r~~f~~~~~~~~~~~~  173 (398)
T Consensus       114 ~~~~~~iG~LiG~EiPLl~rl~~~~~-~~~~~~~vg~v~a~DylGaliGsl~f~flLlP~lGl~~~~~-l~g~lN~~~al  191 (516)
T PRK03612        114 VLATLLIGLLIGMEIPLLMRILQRGR-DAHAGHNVATVLAADYLGALVGGLAFPFLLLPRLGLLRTAA-LTGSLNLLAAL  191 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf             99999999998527899999998622-00222467888867646788999999999987632678999-99999999999


Q ss_pred             HHHHHC
Q ss_conf             887616
Q gi|254780967|r  174 WYYIRF  179 (398)
Q Consensus       174 ~~~~~~  179 (398)
T Consensus       192 ~~~~~f  197 (516)
T PRK03612        192 VFLWLF  197 (516)
T ss_pred             HHHHHH
T ss_conf             999986