HHsearch alignment for GI: 254780967 and conserved domain: PRK03893
>PRK03893 putative sialic acid transporter; Provisional.
Probab=100.00 E-value=0 Score=271.78 Aligned_cols=358 Identities=15% Similarity=0.178 Sum_probs=243.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999988657669999999999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r 5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI 84 (398)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~ 84 (398)
T Consensus 16 ~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g-~~~s~~~~g~~iGa~~~G~laDr~GRr~~~~~~~~~~~~~~~~ 94 (486)
T PRK03893 16 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAA-SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSAGTLA 94 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999988597988999-9999999999999999999999845699999999999999999
Q ss_pred HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 51001101110022321001111111000123321000111122122331000111111111122221111110145678
Q gi|254780967|r 85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM 164 (398)
Q Consensus 85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~ 164 (398)
T Consensus 95 ~a~a~~~~~l~~~R~l~G~g~Gg~~~~~~~~~~E~~P~~~Rg~~~~~~~~g~~~G~~la~~~~~~~~~-~~gWR~~f~i- 172 (486)
T PRK03893 95 CGFAPGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVLAAQVYSLVVP-VWGWRALFFI- 172 (486)
T ss_pred HHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHH-
T ss_conf 99828899999999997422612024899999987756047999999999999999999999999811-5356999999-
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHCCCC--CCCC--------CCC------------CCCCCC-----C-----------
Q ss_conf 8888777788876167886402210111--1112--------333------------100000-----0-----------
Q gi|254780967|r 165 GVITTFITLWYYIRFPETLDPRDVRPLN--LYAI--------LHS------------FSLIFK-----H----------- 206 (398)
Q Consensus 165 ~~~~~~~~~~~~~~~pet~~~~~~~~~~--~~~~--------~~~------------~~~~~~-----~----------- 206 (398)
T Consensus 173 G~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (486)
T PRK03893 173 GILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQNAAIVAVLGLLCA 252 (486)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999980999878998765231577899998513442102455320003566652022342046888999888
Q ss_pred -----------CHHHHHHHHHHHHHHC--C--HHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf -----------0002567778876310--0--14688876545543153110-158899886576778899999850015
Q gi|254780967|r 207 -----------RASTLYNIANSLTMGA--I--LGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFG 270 (398)
Q Consensus 207 -----------~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~ 270 (398)
T Consensus 253 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~fl~~w~~~~~lPt~L~~~~g~~~~~~~~~~~~~~lg~~vG~l~~g~L~DriG 332 (486)
T PRK03893 253 AIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLG 332 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999998731357899999999999999999889999999999751888889999999999999999999999998948
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 65124688778889999999987325777640379989989999999999999999985346-67699999999999999
Q gi|254780967|r 271 IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVI 349 (398)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~ 349 (398)
T Consensus 333 rr~~~~~~~l~~~~~~~~l--~~~---~~~~~~~l~~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vGRlG 407 (486)
T PRK03893 333 TRKAYVCSLLISQLLIIPV--FAI---GGANVWVLGLLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVGALG 407 (486)
T ss_pred CHHHHHHHHHHHHHHHHHH--HHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 5899999999999999999--997---56469999999999999999999999999887488969889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999998311799999
Q gi|254780967|r 350 STILGIIIGQSFNGTTYPITI 370 (398)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~~ 370 (398)
T Consensus 408 ~ii~P~i~g~L~~~~~lg~~~ 428 (486)
T PRK03893 408 GALAPILGALIAQRLGLGTAL 428 (486)
T ss_pred HHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999999998708951899