HHsearch alignment for GI: 254780967 and conserved domain: PRK03893

>PRK03893 putative sialic acid transporter; Provisional.
Probab=100.00  E-value=0  Score=271.78  Aligned_cols=358  Identities=15%  Similarity=0.178  Sum_probs=243.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
T Consensus        16 ~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g-~~~s~~~~g~~iGa~~~G~laDr~GRr~~~~~~~~~~~~~~~~   94 (486)
T PRK03893         16 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAA-SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSAGTLA   94 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999988597988999-9999999999999999999999845699999999999999999


Q ss_pred             HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             51001101110022321001111111000123321000111122122331000111111111122221111110145678
Q gi|254780967|r   85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM  164 (398)
Q Consensus        85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~  164 (398)
T Consensus        95 ~a~a~~~~~l~~~R~l~G~g~Gg~~~~~~~~~~E~~P~~~Rg~~~~~~~~g~~~G~~la~~~~~~~~~-~~gWR~~f~i-  172 (486)
T PRK03893         95 CGFAPGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVLAAQVYSLVVP-VWGWRALFFI-  172 (486)
T ss_pred             HHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHH-
T ss_conf             99828899999999997422612024899999987756047999999999999999999999999811-5356999999-


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHCCCC--CCCC--------CCC------------CCCCCC-----C-----------
Q ss_conf             8888777788876167886402210111--1112--------333------------100000-----0-----------
Q gi|254780967|r  165 GVITTFITLWYYIRFPETLDPRDVRPLN--LYAI--------LHS------------FSLIFK-----H-----------  206 (398)
Q Consensus       165 ~~~~~~~~~~~~~~~pet~~~~~~~~~~--~~~~--------~~~------------~~~~~~-----~-----------  206 (398)
T Consensus       173 G~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (486)
T PRK03893        173 GILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQNAAIVAVLGLLCA  252 (486)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             99999999999980999878998765231577899998513442102455320003566652022342046888999888


Q ss_pred             -----------CHHHHHHHHHHHHHHC--C--HHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             -----------0002567778876310--0--14688876545543153110-158899886576778899999850015
Q gi|254780967|r  207 -----------RASTLYNIANSLTMGA--I--LGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFG  270 (398)
Q Consensus       207 -----------~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~  270 (398)
T Consensus       253 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~fl~~w~~~~~lPt~L~~~~g~~~~~~~~~~~~~~lg~~vG~l~~g~L~DriG  332 (486)
T PRK03893        253 AIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLG  332 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999998731357899999999999999999889999999999751888889999999999999999999999998948


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             65124688778889999999987325777640379989989999999999999999985346-67699999999999999
Q gi|254780967|r  271 IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVI  349 (398)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~  349 (398)
T Consensus       333 rr~~~~~~~l~~~~~~~~l--~~~---~~~~~~~l~~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vGRlG  407 (486)
T PRK03893        333 TRKAYVCSLLISQLLIIPV--FAI---GGANVWVLGLLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVGALG  407 (486)
T ss_pred             CHHHHHHHHHHHHHHHHHH--HHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             5899999999999999999--997---56469999999999999999999999999887488969889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999998311799999
Q gi|254780967|r  350 STILGIIIGQSFNGTTYPITI  370 (398)
Q Consensus       350 ~~~~~~~~g~~~~~~~~~~~~  370 (398)
T Consensus       408 ~ii~P~i~g~L~~~~~lg~~~  428 (486)
T PRK03893        408 GALAPILGALIAQRLGLGTAL  428 (486)
T ss_pred             HHHHHHHHHHHHHCCCCHHHH
T ss_conf             999999999998708951899