HHsearch alignment for GI: 254780967 and conserved domain: PRK09528

>PRK09528 lacY galactoside permease; Reviewed.
Probab=99.94  E-value=8.5e-23  Score=142.20  Aligned_cols=376  Identities=13%  Similarity=0.064  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH--HHHHHHHHH
Q ss_conf             9999999988657669999999999-8199988999999999999999999999999865082899999--999999999
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMF--GLVIHIIST   82 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~--g~~~~~i~~   82 (398)
T Consensus        12 ~~s~~yf~yF~~~g~~~pf~~vwL~~~~Gls~~qIG-li~s~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~~~~~~   90 (418)
T PRK09528         12 LFSLFFFFFFFIWSSYFSFFPIWLHDINGLSKTDTG-IIFSAISLFALLFQPLYGVISDKLGLKKYLLWIISGLLVLFGP   90 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999996767898999999-9999999999999888999742024127899999999999999


Q ss_pred             -HHHHCCC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             -9851001----1011-100223210011111110001233210001111221223310001111111111222211111
Q gi|254780967|r   83 -FIMVTIN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG  156 (398)
Q Consensus        83 -~~~~~a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g  156 (398)
T Consensus        91 ~f~~vf~pll~~~~~lg~~~~~i~~~~~~~a~~pl~ds~~~~~s~--~~~~~YG~iRlwGSiGfavas~~~G~l~~~~--  166 (418)
T PRK09528         91 FFIYVFAPLLQYNILVGAIVGGIYLGFGFNAGAGAIEAYIEKVSR--NSGFEYGRARMFGSLGWALCAFFAGILFNIN--  166 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_conf             999999999999999999999999999873466389999999987--7589762478999999999999988987617--


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH----H
Q ss_conf             10145678888877778887616788640221----011111123331000000000256777887631001468----8
Q gi|254780967|r  157 WIGIFVCMGVITTFITLWYYIRFPETLDPRDV----RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV----N  228 (398)
Q Consensus       157 Wr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  228 (398)
T Consensus       167 ~~~~f~~~s~~~li~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~~~~~~~~~~~~d~~f~~  246 (418)
T PRK09528        167 PQINFWLGSGCALILAVLLFFAKPDAPSTATVANAVGANPSAVSLKDALALFKLPKFWFLVLYVIGVACIYDVFDQQFPN  246 (418)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             32899999999999999999846765322100000014668877999999836749999999999999999999988889


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             87654554315311015889988657677889999985001565124688778889999999987325777640379989
Q gi|254780967|r  229 SSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF  308 (398)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
T Consensus       247 f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~r~g~k~~Llla~~~~~lRw~~~---~----~~~~~~~i~~~  319 (418)
T PRK09528        247 FFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIINRIGAKNALLLAGTIMAVRIIGS---A----FATNALEVSIL  319 (418)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---H----HCCCHHHHHHH
T ss_conf             9999977016671367699999999999999999999986080999999999999999986---3----00138999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHH
Q ss_conf             989999999999999999985346-676999999999-999999999999999983117999999-9999999-999999
Q gi|254780967|r  309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGF-INTVISTILGIIIGQSFNGTTYPITIG-FFGIAVS-SFICIL  384 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~  384 (398)
T Consensus       320 qlLHa~tf~l~~~a~~~yI~~~~~~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~~~~y~~~g~i~~~~tlis~f  399 (418)
T PRK09528        320 KLLHAFEVPFLLVGIFKYITSNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQDTYLVLGLIVLGFTLISAF  399 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999858888899999999999999999997420688999844579999999999999999999


Q ss_pred             HHHCCHHHH
Q ss_conf             994220003
Q gi|254780967|r  385 IVEKNQMFR  393 (398)
Q Consensus       385 ~~~~~~~~r  393 (398)
T Consensus       400 ~l~~~~~~~  408 (418)
T PRK09528        400 TLSGKRPLS  408 (418)
T ss_pred             HHCCCCCCC
T ss_conf             735788675