HHsearch alignment for GI: 254780967 and conserved domain: PRK09584

>PRK09584 tppB putative tripeptide transporter permease; Reviewed.
Probab=99.91  E-value=5.6e-20  Score=126.64  Aligned_cols=350  Identities=14%  Similarity=0.082  Sum_probs=195.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH
Q ss_conf             9999999886576699999-9999981999889999999999999999999999998650-8289999999999999998
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCL-PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~l-p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~   84 (398)
T Consensus        26 lf~tE~wERFsyYGmralL~lyl~~~Lg~s~~~A~~-i~g~f~alvYl~pi~GG~lADr~LG~r~ti~~G~il~~~G~~~  104 (500)
T PRK09584         26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSIT-LFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL  104 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999884998889999-9999999999999869999896104099999999999998999


Q ss_pred             HHCCCC-HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             510011-011100223210011111110001233210001--11122122331000111111111122221111110145
Q gi|254780967|r   85 MVTINS-FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR--DMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus        85 ~~~a~~-~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~--~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f  161 (398)
T Consensus       105 La~~~~~~~~~~~gL~lI~vG~G~~KpnisslvG~lY~~~d~rrD~~FtiFYmgINiGafla~ll~g-~l~~~~G~~~gF  183 (500)
T PRK09584        105 VAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP-WLAAKYGWSVAF  183 (500)
T ss_pred             HHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHH
T ss_conf             9723563789999999999555346765778887605899633224422899999899999999999-999873616789


Q ss_pred             HHHHHHHHHHHHHHHH---HCCCCCCHHHHCCCCCCCCCC----------------------------------------
Q ss_conf             6788888777788876---167886402210111111233----------------------------------------
Q gi|254780967|r  162 VCMGVITTFITLWYYI---RFPETLDPRDVRPLNLYAILH----------------------------------------  198 (398)
Q Consensus       162 ~~~~~~~~~~~~~~~~---~~pet~~~~~~~~~~~~~~~~----------------------------------------  198 (398)
T Consensus       184 ~~a~igM~igli~f~~~~k~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (500)
T PRK09584        184 ALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKE  263 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98999999999999997887425788867453015689999999999999999997304899999999999999999999


Q ss_pred             --CCCCCCCCCHHHHHHHHHHHHHHCCHH-HHH--HHHHHHHHH------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --310000000002567778876310014-688--876545543------153110158899886576778899999850
Q gi|254780967|r  199 --SFSLIFKHRASTLYNIANSLTMGAILG-FVN--SSQQIYVGI------YQLGNLFPIAFAVGGFAMSIASFINSRLVE  267 (398)
Q Consensus       199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  267 (398)
T Consensus       264 ~~~~~~~er~r~-~~~-~il~~~~ivFw~~y~Q~~ssl~lfa~~~vd~~l~g~~ip~~~fqslNpl~IiilaPl~a~lw~  341 (500)
T PRK09584        264 AFAMKGAARRKM-IVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYN  341 (500)
T ss_pred             HCCCCHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             704788998358-999-999999999999999834899999998334212773217899988727999998999999999


Q ss_pred             CCCCCCHH--HHHHHHHHHHHH--HHHHHH--HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf             01565124--688778889999--999987--325777640379989989999999999999999985346-67699999
Q gi|254780967|r  268 KFGIRRVS--HYSLLIFFMITG--SWLLVQ--ITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASS  340 (398)
Q Consensus       268 r~~~~~~~--~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~  340 (398)
T Consensus       342 ~lg~~~~~p~KfaiG~~l~gl~F~vl~~~~~~~~~~g~vs~~Wlv~~Y~l~tigEL~lSPvGLS~vtklAP~~~~s~mMG  421 (500)
T PRK09584        342 KMGDTLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMG  421 (500)
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf             81777883699999999999999999999986267884068999999999999999975899999998785999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999
Q gi|254780967|r  341 IFGFINTVISTILGIIIGQS  360 (398)
Q Consensus       341 l~~~~~~~~~~~~~~~~g~~  360 (398)
T Consensus       422 ~wfls~a~gn~lag~ia~~~  441 (500)
T PRK09584        422 SWFLTTAGAALIAGYVAGLM  441 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999986