HHsearch alignment for GI: 254780967 and conserved domain: PRK10504
>PRK10504 multidrug efflux system protein MdtE; Provisional.
Probab=100.00 E-value=0 Score=302.57 Aligned_cols=379 Identities=17% Similarity=0.183 Sum_probs=285.2
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 38999-99999998865766999999999981999889999999999999999999999998650828999999999999
Q gi|254780967|r 2 EFVIV-IAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII 80 (398)
Q Consensus 2 ~~i~~-l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i 80 (398)
T Consensus 9 rW~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~-Wv~taY~L~~a~~~p~~G~laDrfG~rrvf~~gl~~F~~ 87 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMH-MVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 7999999999999999997999999999998698873799-999999999999999999999994877999999999999
Q ss_pred HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99985100110111002232100111111100012332100011112212233100011111111112222111111014
Q gi|254780967|r 81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI 160 (398)
Q Consensus 81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~ 160 (398)
T Consensus 88 gSllca~A~s~~~Li~~R~lQGiG~a~~~P~~~~ii~~~~p~~~~~~a~g~~~~~~~~g~~lGP~lGG~l~-~~~~Wrwi 166 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGLLV-EYASWHWI 166 (471)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC-CCHHHHHH
T ss_conf 99999971778999999999852762102303410342377688999999999999999885312100101-10102359
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC---------------------CC---------------------
Q ss_conf 567888887777888761678864022101111112---------------------33---------------------
Q gi|254780967|r 161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAI---------------------LH--------------------- 198 (398)
Q Consensus 161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~---------------------~~--------------------- 198 (398)
T Consensus 167 F~invPi~ii~~~~~~~~~p~~~~~~~~--~D~~G~~l~~~~l~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~ 244 (471)
T PRK10504 167 FLINIPVGIIGAIATLMLMPNYTMQTRR--FDLSGFLLLAVGMAVLTLALDGSKGTGLSPLAIAGLVAVGVVALVLYLLH 244 (471)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8760699999999999948876655566--78287999999999999999267777754699999999999999999999
Q ss_pred --------CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf --------310000000002567778876310014688876545543153110-15889988657677889999985001
Q gi|254780967|r 199 --------SFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKF 269 (398)
Q Consensus 199 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~ 269 (398)
T Consensus 245 ~~r~~~Pll~l~Lfr~r~f~~~~~~~~~~~~~~~~~~fl~pl~lQ~~~G~Sp~~aGl~llP~~~~~~~~~~~~g~l~~r~ 324 (471)
T PRK10504 245 ARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF 324 (471)
T ss_pred HHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98189886498993631699999999999999999999999999996598899999999999999999999999998860
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 565124688778889999999987325777640379989989999999999999999985346-6769999999999999
Q gi|254780967|r 270 GIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTV 348 (398)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~ 348 (398)
T Consensus 325 G~r~~l~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~G~g~~l~~~~~~~~~~~~vp~~~~g~as~l~~~~rql 400 (471)
T PRK10504 325 GYRRVLVATTLGLALVSL--LFMTVA--LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL 400 (471)
T ss_pred CCHHHHHHHHHHHHHHHH--HHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH
T ss_conf 835899999999999999--999870--3454999999999999999999999999998639977416499999999999
Q ss_pred HHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999831------------1799999999999999999999942
Q gi|254780967|r 349 ISTILGIIIGQSFNG------------TTYPITIGFFGIAVSSFICILIVEK 388 (398)
Q Consensus 349 ~~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (398)
T Consensus 401 g~slGvAv~g~~l~~~~~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~~~~~r 452 (471)
T PRK10504 401 SMSIGVTIAGLLLGLFGSQHVSVDSGATHTVFMYTWLCMAVIIALPALIFAR 452 (471)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999986024567653025778999999999999999999822