HHsearch alignment for GI: 254780967 and conserved domain: PRK10642
>PRK10642 proline/glycine betaine transporter; Provisional.
Probab=100.00 E-value=3.2e-36 Score=216.15 Aligned_cols=374 Identities=14% Similarity=0.115 Sum_probs=230.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99988657669999999999819998-89999-99999999999---999999999865082899999999999999985
Q gi|254780967|r 11 MAINSLGIDIILPCLPKISDSLHLSN-ENYGQ-HLISFYLIGYG---IAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM 85 (398)
Q Consensus 11 ~~~~~~~~~~~~p~lp~i~~~l~~s~-~~~~~-~~~s~~~~~~~---i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~ 85 (398)
T Consensus 25 ~~lEwyDF~iYg~~A~~i~~~FFP~~~~~~~ll~tfa~favgf~~RPlGgivfG~lgDr~GRk~~L~~ti~lM~~~T~li 104 (490)
T PRK10642 25 NAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI 104 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999998619999946999999999999999885799999999985210999999999999999999
Q ss_pred HCCCCHH--------HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC---CC--
Q ss_conf 1001101--------1100223210011111110001233210001111221223310001111111111222---21--
Q gi|254780967|r 86 VTINSFT--------GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT---VA-- 152 (398)
Q Consensus 86 ~~a~~~~--------~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l---~~-- 152 (398)
T Consensus 105 gllPtY~~IGi~ApilLvllRllQG~s~GGE~~ga~~~l~E~aP~~~RG~~~s~~~~g~~~G~llaa~~~~~l~~~l~~~ 184 (490)
T PRK10642 105 GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA 184 (490)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 87477998899999999999999888631427689999998589765020123898889999999999999999866987
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC----CCCC----CCCCCCCCCCCCCC-HHHHHHH-HHHHHH
Q ss_conf --1111101456788888777788876167886402210----1111----11233310000000-0025677-788763
Q gi|254780967|r 153 --LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVR----PLNL----YAILHSFSLIFKHR-ASTLYNI-ANSLTM 220 (398)
Q Consensus 153 --~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~----~~~~----~~~~~~~~~~~~~~-~~~~~~~-~~~~~~ 220 (398)
T Consensus 185 ~~~~wGWRIPFlig~~l~-ligl~iR~~l~ESP~F~~~~e~~~~~~~~~~~~~~~~pl~e~~~~~~r~ll~~~gl~~~~~ 263 (490)
T PRK10642 185 NFLDWGWRIPFFIALPLG-IIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATN 263 (490)
T ss_pred HHHCCCHHHHHHHHHHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 762655299999999999-9999999808998768988877642100001346544499999984799999999999999
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 1001468887654554315311015889-988657677889999985001565124688778889999999987325777
Q gi|254780967|r 221 GAILGFVNSSQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP 299 (398)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (398)
T Consensus 264 ~~~Y~~~~y~ptyl~~~l~~s~~~~~~~~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P~f~ll--~~~- 340 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--NSN- 340 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH--HCC-
T ss_conf 99999999999999980299877899999999999999999999999882648999999999999999999998--479-
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q ss_conf 640379989989999999999999999985346-676999999999999999999999999983117--99999999999
Q gi|254780967|r 300 IHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT--YPITIGFFGIA 376 (398)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~ 376 (398)
T Consensus 341 -~~~~i~~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~gG~tP~I~t~Li~~Tg~~~~pa~Yl~~~a 419 (490)
T PRK10642 341 -VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTLAAWLVESSQNLMMPAYYLMVVA 419 (490)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf -6999999999999999999889999999868870677988799999999998999999999998799708999999999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999999422
Q gi|254780967|r 377 VSSFICILIVEKN 389 (398)
Q Consensus 377 ~~~~~~~~~~~~~ 389 (398)
T Consensus 420 ~i~lia~~~~~ET 432 (490)
T PRK10642 420 VIGLITGVTMKET 432 (490)
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999999956424