HHsearch alignment for GI: 254780967 and conserved domain: PRK10642
>PRK10642 proline/glycine betaine transporter; Provisional.
Probab=99.69 E-value=1.7e-16 Score=107.48 Aligned_cols=164 Identities=20% Similarity=0.234 Sum_probs=109.1
Q ss_pred HHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH---HHCCCCHHHHC
Q ss_conf 69999999-999819998899999999999999999999999986508289999999999999998---51001101110
Q gi|254780967|r 20 IILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI---MVTINSFTGML 95 (398)
Q Consensus 20 ~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~---~~~a~~~~~l~ 95 (398)
T Consensus 268 ~~~~y~ptyl~~~l~~s~~~~~-~~~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P~f~ll~~~~~~~i~ 346 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGV-LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIF 346 (490)
T ss_pred HHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 9999999999980299877899-999999999999999999999882648999999999999999999998479699999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHH
Q ss_conf 0223210011111110001233210001111221223-3100011111111112222111111014-5678888877778
Q gi|254780967|r 96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIA-MMIFMIMPILAPSIGQATVALSGGWIGI-FVCMGVITTFITL 173 (398)
Q Consensus 96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~-~~~~~~g~~igp~ig~~l~~~~~gWr~~-f~~~~~~~~~~~~ 173 (398)
T Consensus 347 ~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~g-G~tP~I~t~Li~~Tg~~~~pa~Yl-~~~a~i~li 424 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIA-GLTPTLAAWLVESSQNLMMPAYYL-MVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHH
T ss_conf 999999999999988999999986887067798879999999999-899999999999879970899999-999999999
Q ss_pred HHHHHCCCCCCHHH
Q ss_conf 88761678864022
Q gi|254780967|r 174 WYYIRFPETLDPRD 187 (398)
Q Consensus 174 ~~~~~~pet~~~~~ 187 (398)
T Consensus 425 -a~~~~~ET~~~pL 437 (490)
T PRK10642 425 -TGVTMKETANRPL 437 (490)
T ss_pred -HHHHCCCCCCCCC
T ss_conf -9995642489999