HHsearch alignment for GI: 254780967 and conserved domain: PRK11043

>PRK11043 inner membrane transport protein YdhC; Provisional.
Probab=100.00  E-value=0  Score=418.40  Aligned_cols=384  Identities=18%  Similarity=0.296  Sum_probs=333.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             38999999999988657669999999999819998899999999999999999999999986508289999999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
T Consensus         6 ~~l~lLa~l~algplaiDiyLPalP~ia~~f~~~~~~~q-ltls~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~   84 (401)
T PRK11043          6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVS-ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALG   84 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             899999999999999999998429999999696999999-9999999999999999999998827879999999999999


Q ss_pred             HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99851001101110022321001111111000123321000111122122331000111111111122221111110145
Q gi|254780967|r   82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus        82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f  161 (398)
T Consensus        85 s~~~~~a~~~~~li~~R~lQg~g~~~~~v~~~aiirD~~~~~~~~~~~s~~~~~~~i~p~laP~iGg~l-~~~~gWr~iF  163 (401)
T PRK11043         85 SLGMLWVESAAMLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAQRIFATIMPLVALSPALAPLLGAWL-LNHFGWQAIF  163 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHH
T ss_conf             999998889999999999987310146788889998417899999999999999999999998899999-7047869999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             67888887777888761678864022101111112333100000000025677788763100146888765455431531
Q gi|254780967|r  162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG  241 (398)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (398)
T Consensus       164 ~~l~~~gvll~l~~~~~~~e~~~~~~------~~~~~~y~~lL~~r~F~~~~l~~~~~~~~~fayis~spfil~~~G~s~  237 (401)
T PRK11043        164 ATLFAITLLLILPTLWLKPSKKARNN------SQDGLTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIMEQMGYSP  237 (401)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCC------CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             99999999999999865887788875------423568999980868899999999999999999996699999929999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             10158899886576778899999850015651246887788899999999873257776403799899899999999999
Q gi|254780967|r  242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS  321 (398)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (398)
T Consensus       238 ~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~--~~~~~~~l~~~~~l~~~g~G~i~p  315 (401)
T PRK11043        238 AVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLL--SHVSIVPILIPFCVMAAANGAIYP  315 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999988089999999999999999999999987--042499999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             99999985346676999999999999999999999999983117999999999999999999999422000343
Q gi|254780967|r  322 NFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT  395 (398)
Q Consensus       322 ~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  395 (398)
T Consensus       316 n~~a~Al~~f~~~AGtASaL~G~lQ~~~gal~s~lv~~~~~~~~~~m~~~m~~~~~~~~l~~~l~r~~~~~~~~  389 (401)
T PRK11043        316 IVVAQALRPFPQATGKAAGLQNTLQLGLCFLASLLVSALISTPLLTTGSVMLSTVVLVALGYKLQRHAEWGEFT  389 (401)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999973481306099999999999999999999996536983799999999999999999998617750331