HHsearch alignment for GI: 254780967 and conserved domain: PRK11043
>PRK11043 inner membrane transport protein YdhC; Provisional.
Probab=100.00 E-value=0 Score=418.40 Aligned_cols=384 Identities=18% Similarity=0.296 Sum_probs=333.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 38999999999988657669999999999819998899999999999999999999999986508289999999999999
Q gi|254780967|r 2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS 81 (398)
Q Consensus 2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 81 (398)
T Consensus 6 ~~l~lLa~l~algplaiDiyLPalP~ia~~f~~~~~~~q-ltls~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~ 84 (401)
T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVS-ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALG 84 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 899999999999999999998429999999696999999-9999999999999999999998827879999999999999
Q ss_pred HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99851001101110022321001111111000123321000111122122331000111111111122221111110145
Q gi|254780967|r 82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF 161 (398)
Q Consensus 82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f 161 (398)
T Consensus 85 s~~~~~a~~~~~li~~R~lQg~g~~~~~v~~~aiirD~~~~~~~~~~~s~~~~~~~i~p~laP~iGg~l-~~~~gWr~iF 163 (401)
T PRK11043 85 SLGMLWVESAAMLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAQRIFATIMPLVALSPALAPLLGAWL-LNHFGWQAIF 163 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHH
T ss_conf 999998889999999999987310146788889998417899999999999999999999998899999-7047869999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf 67888887777888761678864022101111112333100000000025677788763100146888765455431531
Q gi|254780967|r 162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG 241 (398)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (398)
T Consensus 164 ~~l~~~gvll~l~~~~~~~e~~~~~~------~~~~~~y~~lL~~r~F~~~~l~~~~~~~~~fayis~spfil~~~G~s~ 237 (401)
T PRK11043 164 ATLFAITLLLILPTLWLKPSKKARNN------SQDGLTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIMEQMGYSP 237 (401)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCC------CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999865887788875------423568999980868899999999999999999996699999929999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 10158899886576778899999850015651246887788899999999873257776403799899899999999999
Q gi|254780967|r 242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS 321 (398)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (398)
T Consensus 238 ~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~--~~~~~~~l~~~~~l~~~g~G~i~p 315 (401)
T PRK11043 238 AVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLL--SHVSIVPILIPFCVMAAANGAIYP 315 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999988089999999999999999999999987--042499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999985346676999999999999999999999999983117999999999999999999999422000343
Q gi|254780967|r 322 NFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT 395 (398)
Q Consensus 322 ~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 395 (398)
T Consensus 316 n~~a~Al~~f~~~AGtASaL~G~lQ~~~gal~s~lv~~~~~~~~~~m~~~m~~~~~~~~l~~~l~r~~~~~~~~ 389 (401)
T PRK11043 316 IVVAQALRPFPQATGKAAGLQNTLQLGLCFLASLLVSALISTPLLTTGSVMLSTVVLVALGYKLQRHAEWGEFT 389 (401)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999973481306099999999999999999999996536983799999999999999999998617750331