HHsearch alignment for GI: 254780967 and conserved domain: PRK11646

>PRK11646 multidrug resistance protein MdtH; Provisional.
Probab=99.60  E-value=7.3e-15  Score=98.45  Aligned_cols=156  Identities=14%  Similarity=0.098  Sum_probs=120.3

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf             9999999981999889999999999999999999999998-650828999999999999999851001101110022321
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS-DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ  101 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~-Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~  101 (398)
T Consensus       229 ~~lpl~~~~~~~~~~~~g-~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~~~~~~~~~~~i~~~lf  307 (400)
T PRK11646        229 LMLPIMVNDIAGSPSAVK-WMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLF  307 (400)
T ss_pred             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999998558789999-9999999999999999999999854729999999999999999999998899999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             00111111100012332100011112212233100011111111112222111----11101456788888777788876
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS----GGWIGIFVCMGVITTFITLWYYI  177 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~----~gWr~~f~~~~~~~~~~~~~~~~  177 (398)
T Consensus       308 tiGe~l~~P~~~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~~~~p~-~~W~~~~~~~~l~~~~l~~  386 (400)
T PRK11646        308 YIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALHQPE-LPWMMLGIIGIITLLALGW  386 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf             999999975489999983896543237629999999999988989999995530248985-7999999999999999999


Q ss_pred             HCC
Q ss_conf             167
Q gi|254780967|r  178 RFP  180 (398)
Q Consensus       178 ~~p  180 (398)
T Consensus       387 ~~~  389 (400)
T PRK11646        387 QFS  389 (400)
T ss_pred             HHH
T ss_conf             998