HHsearch alignment for GI: 254780967 and conserved domain: PRK11646
>PRK11646 multidrug resistance protein MdtH; Provisional.
Probab=99.60 E-value=7.3e-15 Score=98.45 Aligned_cols=156 Identities=14% Similarity=0.098 Sum_probs=120.3
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf 9999999981999889999999999999999999999998-650828999999999999999851001101110022321
Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS-DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ 101 (398)
Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~-Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~ 101 (398)
T Consensus 229 ~~lpl~~~~~~~~~~~~g-~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~~~~~~~~~~~i~~~lf 307 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVK-WMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLF 307 (400)
T ss_pred HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998558789999-9999999999999999999999854729999999999999999999998899999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 00111111100012332100011112212233100011111111112222111----11101456788888777788876
Q gi|254780967|r 102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS----GGWIGIFVCMGVITTFITLWYYI 177 (398)
Q Consensus 102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~----~gWr~~f~~~~~~~~~~~~~~~~ 177 (398)
T Consensus 308 tiGe~l~~P~~~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~~~~p~-~~W~~~~~~~~l~~~~l~~ 386 (400)
T PRK11646 308 YIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALHQPE-LPWMMLGIIGIITLLALGW 386 (400)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf 999999975489999983896543237629999999999988989999995530248985-7999999999999999999
Q ss_pred HCC
Q ss_conf 167
Q gi|254780967|r 178 RFP 180 (398)
Q Consensus 178 ~~p 180 (398)
T Consensus 387 ~~~ 389 (400)
T PRK11646 387 QFS 389 (400)
T ss_pred HHH
T ss_conf 998