HHsearch alignment for GI: 254780967 and conserved domain: PRK11902
>PRK11902 ampG muropeptide transporter; Reviewed.
Probab=99.96 E-value=2.5e-25 Score=156.11 Aligned_cols=373 Identities=13% Similarity=0.128 Sum_probs=234.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH-HHHHHHHHHHHHHHHHCC-
Q ss_conf 65766999999999981999889999999999999999999999998650-----82899-999999999999985100-
Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIV-MMFGLVIHIISTFIMVTI- 88 (398)
Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i~~~~~~~a- 88 (398)
T Consensus 13 lP~~~~~~~l~~~Lr~~Gvsl~~IG-l-~~ll~LPw~l-KfLWAP~vDr~~~p~lG~rR~Wil~~Q~~l~~~l~~la~~~ 89 (402)
T PRK11902 13 LPLALTSGTLQAWMTVEGLDIQTIG-F-FSLVGQAYIF-KFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIMAMAFLP 89 (402)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHH-H-HHHHHHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 4399999999999988799889999-9-9999999999-99998888640776688740799999999999999998079
Q ss_pred --CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf --110111002232100111111100012332100011112212233100011111111112222111111014567888
Q gi|254780967|r 89 --NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGV 166 (398)
Q Consensus 89 --~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~ 166 (398)
T Consensus 90 p~~~~~~l~~~~~l~af~sAtqDIA~Da~~ie~l~~~e~g~~n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~~~~~~la~ 169 (402)
T PRK11902 90 PHSALWPLALLAVLVAFLSASQDIVFDAYSTDVLRPEERGAGAAVKVLGYRLAMLVSGGLALILADRVLGWGNTYLLMAG 169 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66679999999999999999999999899998559988999999999999999999899999999988869999999999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHCCCC-CCH
Q ss_conf 88777788876167886402210111111233310000000002567778876310-0146888765455431531-101
Q gi|254780967|r 167 ITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGA-ILGFVNSSQQIYVGIYQLG-NLF 244 (398)
Q Consensus 167 ~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~ 244 (398)
T Consensus 170 l~ll~~~~~-l~~~e~~~~~~~~~~~~~~~~~~~~~f~~r~~~~~~l~fillyrlgd~~~~~m~~pFl-l~dlG~s~~~i 247 (402)
T PRK11902 170 LMLAGALTT-LWAPEPEVPARAPRSLGEAVVGPLRDFFSRRGAWWLLLLIVLYKLGDAFAGSLSTTFL-IRGAGFSAGEV 247 (402)
T ss_pred HHHHHHHHH-HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHH
T ss_conf 999999999-9288877544241037899999999999726799999999999989999999878999-97529999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 588998865-7677889999985001565124688778889999999987325777640379989989999999999999
Q gi|254780967|r 245 PIAFAVGGF-AMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF 323 (398)
Q Consensus 245 ~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (398)
T Consensus 248 g~~~~~~G~~a~i~G~~lGG~l~~r~g~~~~L~~~~~~~~l~~l~~~~la~---~~~~~~~l~~~i~~~~~~~g~~~~a~ 324 (402)
T PRK11902 248 GIVNKTLGLAATIVGALAGGSLMVRLGLYRSLMLFGVLQAVSNLGYWLLAV---TPKHLWLMGLAIGVENLCGGMGTAAF 324 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999879999999999999999999973899999999999999999999996---67757999999999999999999999
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 9999853-466769999999999999999999999999831179999999-999999999999994220003430
Q gi|254780967|r 324 SSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGF-FGIAVSSFICILIVEKNQMFRKTE 396 (398)
Q Consensus 324 ~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~ 396 (398)
T Consensus 325 ~a~~m~l~~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~~Gy~~fFi~~~~~~ip~l~ll~~~~~~~~~~~~~ 399 (402)
T PRK11902 325 VALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEALGWPGFYLGTVLIALPGLALLWLMRNTIDRYEAQ 399 (402)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999828866399999999999998999884399999981969999999999999999999988898876654