HHsearch alignment for GI: 254780967 and conserved domain: TIGR00710

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=0  Score=424.02  Aligned_cols=381  Identities=27%  Similarity=0.563  Sum_probs=342.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             38999999999988657669999999999819998899999999999999999999999986508289999999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
T Consensus         5 ~~~~~L~~L~~L~pl~~DMYLPa~p~i~~~L~~~as~vQ-~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~   83 (400)
T TIGR00710         5 AFVLLLGLLSILGPLGIDMYLPAFPEIAKDLSVSASLVQ-LTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALS   83 (400)
T ss_pred             HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             999999898763202112521207898986287866899-9999999999998986523332036723889999999999


Q ss_pred             HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCH
Q ss_conf             9985100110111002232100111111100012332100-011112212233100011111111112-22211111101
Q gi|254780967|r   82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD-GRDMAKVLSIAMMIFMIMPILAPSIGQ-ATVALSGGWIG  159 (398)
Q Consensus        82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~-~~~~~~~~~~~~~~~~~g~~igp~ig~-~l~~~~~gWr~  159 (398)
T Consensus        84 Sl~~~~~~ni~~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~~~~P~~aP~~Ggai~~~~~l~Wha  163 (400)
T TIGR00710        84 SLGLALSNNIETLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVLALAPAVAPLIGGAIYVLVFLSWHA  163 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999985199999999999999989999999888502032578999999999999999878888869999998520999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf             45678888877778887616788640221011111123331000000000256777887631001468887654554315
Q gi|254780967|r  160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ  239 (398)
Q Consensus       160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (398)
T Consensus       164 IF~~L~l~~~~l~a~~f~~~pET~~~~~r~P~~~~~~~~~f~~l~k~k~~~gY~L~~ga~~g~~Faf~~~~Pfv~~~~~g  243 (400)
T TIGR00710       164 IFAVLSLIGILLSALIFFLLPETLPKEKRIPLQISTSVETFLLLLKDKEFLGYALIYGASFGGFFAFLSGAPFVYIDIMG  243 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999999855122740103740300139998678876888999999999868789999841788640014


Q ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH---------HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             311-015889988657677889999985001565124688---------7788899999999873257776403799899
Q gi|254780967|r  240 LGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYS---------LLIFFMITGSWLLVQITSNHPIHLLIFIAFF  309 (398)
Q Consensus       240 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
T Consensus       244 Vsp~~fg~lf~~~~~a~i~g~f~~gr~~~k~~~~~~lr~~~GfifslCGl~~~~~--~a~~l~~~~~~~l~~~~~~i~~~  321 (400)
T TIGR00710       244 VSPSVFGLLFALNIIAMIFGGFLNGRFIKKIGAKSLLRIAVGFIFSLCGLVLFIV--SAVLLVITALLGLGSWLLIIGPM  321 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6567789999999999999999998666543100147899999999999999999--99999999998679999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8999999999999999998534667699999999999999999999999-998311799999999999999999999
Q gi|254780967|r  310 FLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIG-QSFNGTTYPITIGFFGIAVSSFICILI  385 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (398)
T Consensus       322 ~~~~~g~~~~~s~a~~~AL~~f~h~aGtA~al~g~l~~~l~a~vg~lvs~~i~~~Ta~p~~~~~~~~av~~vl~~y~  398 (400)
T TIGR00710       322 IFVGIGVSMVSSIAMALALEKFPHVAGTASALLGTLRLVLGAIVGLLVSSLIKINTAWPMVLSCLVLAVISVLAFYY  398 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99997688999999999862158741019999999999999999999997516761489999999999999999973