HHsearch alignment for GI: 254780967 and conserved domain: TIGR00710

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.88  E-value=1.8e-06  Score=52.17  Aligned_cols=170  Identities=14%  Similarity=0.141  Sum_probs=100.7

Q ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             76310014688876545543153110158899886576778899999850015651246887788899999999873257
Q gi|254780967|r  218 LTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSN  297 (398)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (398)
T Consensus        16 L~pl~~DMYLPa~p~i~~~L~~~as~vQ~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~Sl~~~~~~----   91 (400)
T TIGR00710        16 LGPLGIDMYLPAFPEIAKDLSVSASLVQLTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALSSLGLALSN----   91 (400)
T ss_pred             HCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH----
T ss_conf             3202112521207898986287866899999999999999898652333203672388999999999999999985----


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHH-HHHHH-HHHH
Q ss_conf             77640379989989999999999999999985346-6-76999999999999999999999999--983-11799-9999
Q gi|254780967|r  298 HPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-H-LAGTASSIFGFINTVISTILGIIIGQ--SFN-GTTYP-ITIG  371 (398)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~G~a~~l~~~~~~~~~~~~~~~~g~--~~~-~~~~~-~~~~  371 (398)
T Consensus        92 ---ni~~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~-~~~P~~aP~~Ggai~~~~~l~WhaIF~~  167 (400)
T TIGR00710        92 ---NIETLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVL-ALAPAVAPLIGGAIYVLVFLSWHAIFAV  167 (400)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ---199999999999999989999999888502032578999999999999-9998788888699999985209999999


Q ss_pred             HHHHHHHH-HHHHHHHHCCHHHHHH
Q ss_conf             99999999-9999999422000343
Q gi|254780967|r  372 FFGIAVSS-FICILIVEKNQMFRKT  395 (398)
Q Consensus       372 ~~~~~~~~-~~~~~~~~~~~~~r~~  395 (398)
T Consensus       168 L~l~~~~l~a~~f~~~pET~~~~~r  192 (400)
T TIGR00710       168 LSLIGILLSALIFFLLPETLPKEKR  192 (400)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHCC
T ss_conf             9999999999999855122740103