HHsearch alignment for GI: 254780967 and conserved domain: TIGR00712

>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=99.94  E-value=8.5e-26  Score=158.72  Aligned_cols=362  Identities=16%  Similarity=0.216  Sum_probs=255.3

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCHHHHCCCC
Q ss_conf             999999998199988999999999999999999999999865082899999999999999985100----1101110022
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI----NSFTGMLCMR   98 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a----~~~~~l~~~r   98 (398)
T Consensus        50 lA~PyL~~~GlfSk~eLG-~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~v~~l~~~~PW~TSsiaiMfv~~  128 (468)
T TIGR00712        50 LAIPYLVEQGLFSKAELG-LVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAIVMLLMGLVPWATSSIAIMFVLL  128 (468)
T ss_pred             HCCCHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             327056755752103578-9999999986456788603556767216877889999999999842140357999999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC---CCCCC--------CCCCCCCHHHHHHHHH
Q ss_conf             321001111111000123321000111122122331000111111111---12222--------1111110145678888
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI---GQATV--------ALSGGWIGIFVCMGVI  167 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i---g~~l~--------~~~~gWr~~f~~~~~~  167 (398)
T Consensus       129 Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~Lg~A~F~~~~g~ea~akd~W~~~ly~Pa~~  208 (468)
T TIGR00712       129 FLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVLLGIAIFVSTHGIEAQAKDTWKSALYFPAII  208 (468)
T ss_pred             HHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             98211048879885442000002357786257621520025305899999999998752010022356678876447999


Q ss_pred             HHHHHHHHHHHCCCCCC---------------HHHHCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
Q ss_conf             87777888761678864---------------022101-----1111123331000000000256777887631001468
Q gi|254780967|r  168 TTFITLWYYIRFPETLD---------------PRDVRP-----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV  227 (398)
Q Consensus       168 ~~~~~~~~~~~~pet~~---------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (398)
T Consensus       209 Aii~a~~~~~~~RDTPQSCGLP~IE~yrNDYP~~~~~~~~E~eLTaK~I--~~~YVL~NKlLWYIA~ANVFVYl~RYGvl  286 (468)
T TIGR00712       209 AIIVALLVFLLMRDTPQSCGLPPIEEYRNDYPDDYNEKTAEKELTAKEI--FVQYVLKNKLLWYIAIANVFVYLVRYGVL  286 (468)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999988761787788668820015788234541001210147777--77776500478999999999888764010


Q ss_pred             HHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--------
Q ss_conf             887654554315311-01588998865767788999998500156512468877888999999998732577--------
Q gi|254780967|r  228 NSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH--------  298 (398)
Q Consensus       228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  298 (398)
T Consensus       287 ~WsP~YL~EvK~F~~~~s~WaY~lYEyAgiPGTlLCGW~SDk~Fkg~Rg~~Gv~FM~lv~~Av~vYW~NPAgpeaela~y  366 (468)
T TIGR00712       287 DWSPTYLKEVKHFSLEDSAWAYFLYEYAGIPGTLLCGWVSDKVFKGKRGATGVLFMILVTIAVVVYWLNPAGPEAELANY  366 (468)
T ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             23621465411457676514667767642641000212430000246420578999999999888743799740356654


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Q ss_conf             ------7640379989989999999999999999985346-676999999999999999999-9999999831179999-
Q gi|254780967|r  299 ------PIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTIL-GIIIGQSFNGTTYPIT-  369 (398)
Q Consensus       299 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-  369 (398)
T Consensus       367 ~awyeNPy~lvD~i~~~~IGFLIYGPVM-LIGL~AleLAPKKAAGTAAG~TGlFGYlGGsv~A~Ai~G~~v~~f~WdGGF  445 (468)
T TIGR00712       367 SAWYENPYQLVDFILLIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGFVVDRFGWDGGF  445 (468)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
T ss_conf             5552270578989999998888754799-998889740674011121003455553335764555531232201268653


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999942
Q gi|254780967|r  370 IGFFGIAVSSFICILIVEK  388 (398)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~  388 (398)
T Consensus       446 ~v~Igg~iLAv~lL~~v~~  464 (468)
T TIGR00712       446 IVLIGGSILAVVLLLVVMV  464 (468)
T ss_pred             EEEHHHHHHHHHHHHHHHH
T ss_conf             6532457999999999872