HHsearch alignment for GI: 254780967 and conserved domain: TIGR00712
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=99.94 E-value=8.5e-26 Score=158.72 Aligned_cols=362 Identities=16% Similarity=0.216 Sum_probs=255.3
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCHHHHCCCC
Q ss_conf 999999998199988999999999999999999999999865082899999999999999985100----1101110022
Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI----NSFTGMLCMR 98 (398)
Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a----~~~~~l~~~r 98 (398)
T Consensus 50 lA~PyL~~~GlfSk~eLG-~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~v~~l~~~~PW~TSsiaiMfv~~ 128 (468)
T TIGR00712 50 LAIPYLVEQGLFSKAELG-LVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAIVMLLMGLVPWATSSIAIMFVLL 128 (468)
T ss_pred HCCCHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 327056755752103578-9999999986456788603556767216877889999999999842140357999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC---CCCCC--------CCCCCCCHHHHHHHHH
Q ss_conf 321001111111000123321000111122122331000111111111---12222--------1111110145678888
Q gi|254780967|r 99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI---GQATV--------ALSGGWIGIFVCMGVI 167 (398)
Q Consensus 99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i---g~~l~--------~~~~gWr~~f~~~~~~ 167 (398)
T Consensus 129 Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~Lg~A~F~~~~g~ea~akd~W~~~ly~Pa~~ 208 (468)
T TIGR00712 129 FLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVLLGIAIFVSTHGIEAQAKDTWKSALYFPAII 208 (468)
T ss_pred HHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 98211048879885442000002357786257621520025305899999999998752010022356678876447999
Q ss_pred HHHHHHHHHHHCCCCCC---------------HHHHCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
Q ss_conf 87777888761678864---------------022101-----1111123331000000000256777887631001468
Q gi|254780967|r 168 TTFITLWYYIRFPETLD---------------PRDVRP-----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV 227 (398)
Q Consensus 168 ~~~~~~~~~~~~pet~~---------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (398)
T Consensus 209 Aii~a~~~~~~~RDTPQSCGLP~IE~yrNDYP~~~~~~~~E~eLTaK~I--~~~YVL~NKlLWYIA~ANVFVYl~RYGvl 286 (468)
T TIGR00712 209 AIIVALLVFLLMRDTPQSCGLPPIEEYRNDYPDDYNEKTAEKELTAKEI--FVQYVLKNKLLWYIAIANVFVYLVRYGVL 286 (468)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999988761787788668820015788234541001210147777--77776500478999999999888764010
Q ss_pred HHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--------
Q ss_conf 887654554315311-01588998865767788999998500156512468877888999999998732577--------
Q gi|254780967|r 228 NSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH-------- 298 (398)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 298 (398)
T Consensus 287 ~WsP~YL~EvK~F~~~~s~WaY~lYEyAgiPGTlLCGW~SDk~Fkg~Rg~~Gv~FM~lv~~Av~vYW~NPAgpeaela~y 366 (468)
T TIGR00712 287 DWSPTYLKEVKHFSLEDSAWAYFLYEYAGIPGTLLCGWVSDKVFKGKRGATGVLFMILVTIAVVVYWLNPAGPEAELANY 366 (468)
T ss_pred CCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 23621465411457676514667767642641000212430000246420578999999999888743799740356654
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Q ss_conf ------7640379989989999999999999999985346-676999999999999999999-9999999831179999-
Q gi|254780967|r 299 ------PIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTIL-GIIIGQSFNGTTYPIT- 369 (398)
Q Consensus 299 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~- 369 (398)
T Consensus 367 ~awyeNPy~lvD~i~~~~IGFLIYGPVM-LIGL~AleLAPKKAAGTAAG~TGlFGYlGGsv~A~Ai~G~~v~~f~WdGGF 445 (468)
T TIGR00712 367 SAWYENPYQLVDFILLIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGFVVDRFGWDGGF 445 (468)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
T ss_conf 5552270578989999998888754799-998889740674011121003455553335764555531232201268653
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999942
Q gi|254780967|r 370 IGFFGIAVSSFICILIVEK 388 (398)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (398)
T Consensus 446 ~v~Igg~iLAv~lL~~v~~ 464 (468)
T TIGR00712 446 IVLIGGSILAVVLLLVVMV 464 (468)
T ss_pred EEEHHHHHHHHHHHHHHHH
T ss_conf 6532457999999999872