HHsearch alignment for GI: 254780967 and conserved domain: TIGR00712
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267 This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=97.75 E-value=6.4e-06 Score=49.15 Aligned_cols=126 Identities=14% Similarity=0.173 Sum_probs=93.0
Q ss_pred HHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 8765455431531-101588998865767788999998500156512468877888999999998732577764037998
Q gi|254780967|r 229 SSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIA 307 (398)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (398)
T Consensus 51 A~PyL-~~~GlfSk~eLG~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~v~---~l~~~~PW~TSsiaiMfv 126 (468)
T TIGR00712 51 AIPYL-VEQGLFSKAELGLVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAIVM---LLMGLVPWATSSIAIMFV 126 (468)
T ss_pred CCCHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHH
T ss_conf 27056-75575210357899999999864567886035567672168778899999999---998421403579999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998999999999999999998534-667699999999999999999999999
Q gi|254780967|r 308 FFFLASFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIG 358 (398)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g 358 (398)
T Consensus 127 ~~Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~ 178 (468)
T TIGR00712 127 LLFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVL 178 (468)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf 9998211048879885442000002357786257621520025305899999