HHsearch alignment for GI: 254780967 and conserved domain: TIGR00788
>TIGR00788 fbt folate/biopterin transporter; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters , . This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).; GO: 0016020 membrane.
Probab=96.65 E-value=0.004 Score=33.77 Aligned_cols=159 Identities=14% Similarity=0.156 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---C-CHHHHH-HHHH-HHHHHHHHHHCCC--CHHH
Q ss_conf 99999999981999889999999999999999999999998650---8-289999-9999-9999999851001--1011
Q gi|254780967|r 22 LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF---G-RKIVMM-FGLV-IHIISTFIMVTIN--SFTG 93 (398)
Q Consensus 22 ~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~---G-rr~~l~-~g~~-~~~i~~~~~~~a~--~~~~ 93 (398)
T Consensus 52 ~~~~~~l~~~l~l~~a~~~-~~~g~~~lg~~~-~~~~~~~~d~f~LfGY~~R~y~v~s~l~g~~~a~~~~~L~~~~~~~~ 129 (594)
T TIGR00788 52 LALSPMLTDDLGLDGARYQ-RLTGLSSLGWAL-KPLAGVLSDLFPLFGYTKRWYLVLSGLLGSTVAILYGLLPGKVSSAK 129 (594)
T ss_pred HCCHHHHHEECCCCHHHHH-HCCCHHHHHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 1011221000024467673-136222188899-99999999751377742378899889999999999964033102588
Q ss_pred H-CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC---CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 1-002232100111111100012332100011112---212233100011111111112222111111014567888887
Q gi|254780967|r 94 M-LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAK---VLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT 169 (398)
Q Consensus 94 l-~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~---~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~ 169 (398)
T Consensus 130 ~a~~~~~l~~l~~~~~Dv~~~~~~~~~~R~~~~~~gpsL~S~~w~~~~~G~~~~s~l~G~L~~~-~~~r~~f~i~a~l~l 208 (594)
T TIGR00788 130 VAALLIFLAALSKALSDVLVDSLYVERIRQESPSAGPSLVSLVWGASALGGLISSLLSGPLLDK-TLTRILFLITAALLL 208 (594)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEHHHHHHHH
T ss_conf 9999999999864467788888775554101322565168999999998899997544111026-785244128778899
Q ss_pred HH-HHHHHHHCCCCC
Q ss_conf 77-788876167886
Q gi|254780967|r 170 FI-TLWYYIRFPETL 183 (398)
Q Consensus 170 ~~-~~~~~~~~pet~ 183 (398)
T Consensus 209 l~~l~~V~~~~~E~~ 223 (594)
T TIGR00788 209 LQGLLFVANLSKERR 223 (594)
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999987622553