HHsearch alignment for GI: 254780967 and conserved domain: TIGR00805
>TIGR00805 oat sodium-independent organic anion transporter; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced . Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=99.42 E-value=8.1e-13 Score=87.18 Aligned_cols=254 Identities=19% Similarity=0.275 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC------
Q ss_conf 65766999999999981999889999999999999999999999998650828999999999999999851001------
Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN------ 89 (398)
Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~------ 89 (398)
T Consensus 47 l~~~l~~~~l~~IE~~F~~~~s~~G-~I~~~~e~gn~~l~I~vsyFg~~~~~p~~ig~G~~~~~~G~l~~slPhf~~~~Y 125 (723)
T TIGR00805 47 LVNGLVNSSLTTIERRFKLSTSSSG-LINGSYEIGNLLLIIFVSYFGTKLHRPKVIGIGCVIMGLGSLLLSLPHFLSGRY 125 (723)
T ss_pred HHHHHHCCCCCCCCCEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7612001120333431058767776-301000230112321055630311468999986899988799999778747872
Q ss_pred --------------------------------------------C--HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf --------------------------------------------1--011100223210011111110001233210001
Q gi|254780967|r 90 --------------------------------------------S--FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR 123 (398)
Q Consensus 90 --------------------------------------------~--~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~ 123 (398)
T Consensus 126 ~~~~~~~~~~~~S~~~~~~c~~~~~~~L~~~~~~S~~~~~~~~~S~~~~~~~~~~~l~GIG~tP~~~lGisy~ddf~~~~ 205 (723)
T TIGR00805 126 EYSTTVSSTGNLSSANSFLCMENSTQALRPTQDPSECQKEHKETSLMWLLVLVAQLLRGIGETPIFPLGISYIDDFAKSK 205 (723)
T ss_pred CCCCEEECCCCCCCCCHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf 23521202100024304553257623420103442331122222478999999999741488765456764111256644
Q ss_pred CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC--------------------CCHHHHH----HHHHHHHHHHHHHHHC
Q ss_conf 111221223310001111111111222211111--------------------1014567----8888877778887616
Q gi|254780967|r 124 DMAKVLSIAMMIFMIMPILAPSIGQATVALSGG--------------------WIGIFVC----MGVITTFITLWYYIRF 179 (398)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g--------------------Wr~~f~~----~~~~~~~~~~~~~~~~ 179 (398)
T Consensus 206 ~sply~gi~~~~~v~GP~~G~llgS~~~~~y~D~~~~nt~qil~~~~~p~DprWiGAWW~GFl~~~~v~~~~s~P-lfff 284 (723)
T TIGR00805 206 NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEQILDVILTPTDPRWIGAWWLGFLICSGVALLTSLP-LFFF 284 (723)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH-HHHC
T ss_conf 423799999999998899999998776753102688886671241378998534317899999999999999855-7636
Q ss_pred CCCCCHHHHCC---------CCC---------------------------------------------------------
Q ss_conf 78864022101---------111---------------------------------------------------------
Q gi|254780967|r 180 PETLDPRDVRP---------LNL--------------------------------------------------------- 193 (398)
Q Consensus 180 pet~~~~~~~~---------~~~--------------------------------------------------------- 193 (398)
T Consensus 285 Pk~l~~~~~~~~~~~~~~~~~~~~rtPeccG~PGsnktaalnsdaP~adnfGsnkaikkfdyttfk~lnkifeiteqasl 364 (723)
T TIGR00805 285 PKALPKEGKRKNVDVHEAEKLEKSRTPECCGMPGSNKTAALNSDAPMADNFGSNKAIKKFDYTTFKMLNKIFEITEQASL 364 (723)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55253235677877788888752058643468875420100146630221131235666436899999999987655566
Q ss_pred ---------------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHH
Q ss_conf ---------------------11233310000000002567778876310014688876545543153110-15889988
Q gi|254780967|r 194 ---------------------YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPIAFAVG 251 (398)
Q Consensus 194 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 251 (398)
T Consensus 365 lyssiParG~~~~r~~~~~~~k~F~~~~~~l~~n~~~m~~~l~~~~~~~~~~g~~~FlpKyLE~qyG~~~~~a~~l~G~v 444 (723)
T TIGR00805 365 LYSSIPARGEDKSRKKLSDITKDFPKIIKRLLCNKIYMLVILAQVIDVLAFNGYITFLPKYLEKQYGISSAEANLLIGVV 444 (723)
T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHH
T ss_conf 65203545663026889988989999999973250666777899999999864775201688874488721202111024
Q ss_pred HH-HHHHHHHHHHHHHHCCCC
Q ss_conf 65-767788999998500156
Q gi|254780967|r 252 GF-AMSIASFINSRLVEKFGI 271 (398)
Q Consensus 252 ~~-~~~~~~~~~~~l~~r~~~ 271 (398)
T Consensus 445 ~lP~~~~G~~~gG~i~K~F~~ 465 (723)
T TIGR00805 445 NLPAAGLGYLIGGIIMKKFKL 465 (723)
T ss_pred HHHHHHHHHHHHHHHHHHHEE
T ss_conf 557999999987052221011