HHsearch alignment for GI: 254780967 and conserved domain: TIGR00880

>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734 Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=98.63  E-value=9.5e-06  Score=48.21  Aligned_cols=112  Identities=18%  Similarity=0.227  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88998865767788999998500156512468877888999999998732577764037998998999999999999999
Q gi|254780967|r  246 IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS  325 (398)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (398)
T Consensus         2 ~~~~~yAl~q~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al---~nP-h~~~~~L~i~R~~~G~~~~~~~~~g~a   77 (148)
T TIGR00880         2 LLVAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFAL---SNP-HSNITVLIISRFLQGFGAAAALVAGAA   77 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH---CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7999999999999999999884216289999999999999999884---487-237999999999999988899998988


Q ss_pred             HHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9985346-6-76999999999999999999999999983
Q gi|254780967|r  326 ISMEPFS-H-LAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       326 ~~~~~~~-~-~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
T Consensus        78 ~~aD~~~~~~~~~~a~g~~~~~-~~~g~~lgP~~G~~~~  115 (148)
T TIGR00880        78 LIADIYPPEEERSVALGLMSAG-IALGPILGPPLGGVLA  115 (148)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf             8877426404788999999999-9999999999989998