HHsearch alignment for GI: 254780967 and conserved domain: TIGR00889
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=99.54 E-value=1.9e-12 Score=85.14 Aligned_cols=384 Identities=14% Similarity=0.215 Sum_probs=208.8
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHH
Q ss_conf 99999999988-65766999999999981999889999999999999999999999998650-82899999999999999
Q gi|254780967|r 5 IVIAMLMAINS-LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIIST 82 (398)
Q Consensus 5 ~~l~~~~~~~~-~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~ 82 (398)
T Consensus 5 ~~L~~msFl~~fiWGsWlvtLg~y~~~tl~F~ga~iG-~vYss~gIAAi~~P~l~GiiaDkwlsA~~vya~~~~~gA~~l 83 (435)
T TIGR00889 5 LKLKVMSFLQYFIWGSWLVTLGSYLSKTLKFSGAEIG-AVYSSTGIAAILMPILLGIIADKWLSAQKVYAVCHLVGALLL 83 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4567999999998766898778998661344554203-778877899997278999884156519999999999999999
Q ss_pred HHHHCCCCHHHHCCCCCCCCCC----CCCCCCCCHHHHH----HHHCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCC
Q ss_conf 9851001101110022321001----1111110001233----21000111122122---33100011111111112222
Q gi|254780967|r 83 FIMVTINSFTGMLCMRLIQGIG----GAAPRIITISIIR----DIYDGRDMAKVLSI---AMMIFMIMPILAPSIGQATV 151 (398)
Q Consensus 83 ~~~~~a~~~~~l~~~r~l~G~g----~~~~~~~~~a~i~----~~~~~~~~~~~~~~---~~~~~~~g~~igp~ig~~l~ 151 (398)
T Consensus 84 f~AAq~Ttp~~~F~v~L~ns~ayMPTiaL~Nsisy~~l~~AGlD~~~dFPpIRv~GTiGfI~am~avs--llPqiLGY-a 160 (435)
T TIGR00889 84 FFAAQVTTPAGMFLVLLVNSLAYMPTIALTNSISYANLPNAGLDVVTDFPPIRVMGTIGFIVAMWAVS--LLPQILGY-A 160 (435)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH--HHHHHHHC-C
T ss_conf 88515688867899999999775147888999999855424885413788706850278999999997--52566301-4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-
Q ss_conf 1111110145678888877778887616788640221011111123-33100000000025677788763100146888-
Q gi|254780967|r 152 ALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAIL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNS- 229 (398)
Q Consensus 152 ~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (398)
T Consensus 161 ~~els-~~qLyI~ag~SalL~~fa-l~LP~iPVak~~a~~s~~~~LGLDAf~Lfknkr~~iFF~f-s~llga~L~i~n~F 237 (435)
T TIGR00889 161 DLELS-NLQLYITAGSSALLGVFA-LTLPDIPVAKKKAKMSLKVLLGLDAFILFKNKRMAIFFLF-SMLLGAELQITNIF 237 (435)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHC
T ss_conf 77713-037899999999999999-8478989851003411788876789887508854678999-99975688876530
Q ss_pred HHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCC
Q ss_conf 765455431531--------101588998865767788999998500156512468877888999999998732-57776
Q gi|254780967|r 230 SQQIYVGIYQLG--------NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQIT-SNHPI 300 (398)
Q Consensus 230 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 300 (398)
T Consensus 238 gN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfg---fF~YGsdp~~f 314 (435)
T TIGR00889 238 GNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFG---FFAYGSDPEYF 314 (435)
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HEEECCCCCHH
T ss_conf 452101125788620112321328877488999999998522553134478999999999999876---50307898548
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----H-------HHH
Q ss_conf 40379989989999999999999999-9853466769999999999999999999999999-83-----1-------179
Q gi|254780967|r 301 HLLIFIAFFFLASFQFGLINSNFSSI-SMEPFSHLAGTASSIFGFINTVISTILGIIIGQS-FN-----G-------TTY 366 (398)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~-~~-----~-------~~~ 366 (398)
T Consensus 315 g~~LL~Ls~ivyG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~gePvnGL~~dW 394 (435)
T TIGR00889 315 GYVLLLLSMIVYGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEPVNGLVFDW 394 (435)
T ss_pred HHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC
T ss_conf 99999999999865441034457899600278666678889999997017777754456366643312787445414055
Q ss_pred HHHHH-HHHH-HHHHHHHHHHHHCCHH---HHHHHCC
Q ss_conf 99999-9999-9999999999942200---0343069
Q gi|254780967|r 367 PITIG-FFGI-AVSSFICILIVEKNQM---FRKTELR 398 (398)
Q Consensus 367 ~~~~~-~~~~-~~~~~~~~~~~~~~~~---~r~~~~r 398 (398)
T Consensus 395 ~t~Wl~fAgy~~~lAv~Fm~~Fky~~~eit~~k~~~r 431 (435)
T TIGR00889 395 QTVWLVFAGYIVILAVLFMIFFKYSHNEITAIKVDDR 431 (435)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 1367899999999999998763025664000235764