HHsearch alignment for GI: 254780967 and conserved domain: TIGR00891
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742 The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family. Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.96 E-value=3.7e-29 Score=177.26 Aligned_cols=332 Identities=14% Similarity=0.189 Sum_probs=216.7
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
Q ss_conf 99999999819998899999999999999999999999986508289999999999999998510011011100223210
Q gi|254780967|r 23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQG 102 (398)
Q Consensus 23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G 102 (398)
T Consensus 33 lv~a~~a~~f~~t~~d~a-~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~~~lfs~~~l~c~fap~y~~~~i~Rl~~G 111 (453)
T TIGR00891 33 LVLAEVAEEFDRTTKDVA-FLLSAVLIVRSVGALLFGLWADRVGRRLPLVTSVVLFSVATLLCAFAPTYEKLLIVRLVIG 111 (453)
T ss_pred EEEECCHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 565010420068447899-9999999997588999988742255603788887999999975055760788999999996
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0111111100012332100011112212233100011111111112222111-111014567888887777888761678
Q gi|254780967|r 103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFITLWYYIRFPE 181 (398)
Q Consensus 103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~~~~~~~~~pe 181 (398)
T Consensus 112 igMgG~yG~~aa~~iE~~P~~~R~~~SGll~sgya~G~~~A~~~y~~v~~~~g~~Wr~LF~~-sI~p~i~~l~~R~~~pE 190 (453)
T TIGR00891 112 IGMGGEYGLAAALAIEKVPAKLRSVLSGLLISGYAVGYVLAAVVYRVVVNFLGLSWRILFFL-SILPAILALFLRLRVPE 190 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHCCCCC
T ss_conf 44100466799899984038762233258888999999999999998887623258999999-99999999998503862
Q ss_pred CCCHHHHCCCCCCCCCCCCCCCCCCCHH--------------------------------------------------HH
Q ss_conf 8640221011111123331000000000--------------------------------------------------25
Q gi|254780967|r 182 TLDPRDVRPLNLYAILHSFSLIFKHRAS--------------------------------------------------TL 211 (398)
Q Consensus 182 t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~ 211 (398)
T Consensus 191 ~e~w~~~~~~~-~l~~t~~~~~~gge~~~~~~~~~~~~~talWfCfaGnlqnaaivavlGllCaaifisfM~~~~~KrW~ 269 (453)
T TIGR00891 191 AEVWKKALKAK-KLVKTRVDKVLGGEALVKAIVKTKAVATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMKRSVQKRWL 269 (453)
T ss_pred CHHHHHHHHCC-CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 06799998403-64166899862786027999999999999999884101368999999999999999998774031247
Q ss_pred HH----HHHHHHHHCCHHHHHHHHHHHHHH--CC--CCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 67----778876310014688876545543--15--3110-158899886576778899999850015651246887788
Q gi|254780967|r 212 YN----IANSLTMGAILGFVNSSQQIYVGI--YQ--LGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIF 282 (398)
Q Consensus 212 ~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~ 282 (398)
T Consensus 270 ~fvyLvvl~~~~n~~sh~~QdllPT~L~a~tdhGlgls~~tv~~ivv~~niGAi~Gg~~fG~l~~~~grR~~~v~~~~~- 348 (453)
T TIGR00891 270 LFVYLVVLLVAANYLSHAIQDLLPTYLKADTDHGLGLSKDTVAVIVVVSNIGAIVGGLVFGTLSEVLGRRLALVIALLL- 348 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH-
T ss_conf 8999999999988752104553220121354201345731416877872624687755302155666689999999986-
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999987325777640379989-989999999999999999985346-6769999999999999999999999999
Q gi|254780967|r 283 FMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQS 360 (398)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~ 360 (398)
T Consensus 349 ----g~l~i~P~Fa~~G~~~a~Lglg~F~~q~~vqG-~wGilP~hl~e~~p~d~Ra~~~G~tYqlGnL~~A~a~~I~~~l 423 (453)
T TIGR00891 349 ----GQLLIVPVFALSGAEAAVLGLGLFLLQVLVQG-VWGILPKHLAELAPADARAVVAGLTYQLGNLAAALASIIEERL 423 (453)
T ss_pred ----CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf ----01233025652141799999999999998415-7655798860459033246443631457778987623788875
Q ss_pred HHH
Q ss_conf 831
Q gi|254780967|r 361 FNG 363 (398)
Q Consensus 361 ~~~ 363 (398)
T Consensus 424 A~r 426 (453)
T TIGR00891 424 AER 426 (453)
T ss_pred HHH
T ss_conf 631