HHsearch alignment for GI: 254780967 and conserved domain: TIGR00891
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742 The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family. Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.47 E-value=1.4e-08 Score=63.83 Aligned_cols=117 Identities=11% Similarity=0.120 Sum_probs=73.6
Q ss_pred HHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 554315311-0158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r 234 YVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA 312 (398)
Q Consensus 234 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (398)
T Consensus 38 ~a~~f~~t~~d~a~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~~~lfs~~~---l~c----~fap~y~~~~i~Rl~~ 110 (453)
T TIGR00891 38 VAEEFDRTTKDVAFLLSAVLIVRSVGALLFGLWADRVGRRLPLVTSVVLFSVAT---LLC----AFAPTYEKLLIVRLVI 110 (453)
T ss_pred CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH---HHC----CCCCCHHHHHHHHHHH
T ss_conf 042006844789999999999975889999887422556037888879999999---750----5576078899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999985346-67699999999999999999999999
Q gi|254780967|r 313 SFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIG 358 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g 358 (398)
T Consensus 111 GigMgG~yG~~aa~~iE~~P~~~R~~~SGll~-sgya~G~~~A~~~y 156 (453)
T TIGR00891 111 GIGMGGEYGLAAALAIEKVPAKLRSVLSGLLI-SGYAVGYVLAAVVY 156 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_conf 64410046679989998403876223325888-89999999999999