HHsearch alignment for GI: 254780967 and conserved domain: TIGR00896
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.97 E-value=3.2e-27 Score=166.57 Aligned_cols=341 Identities=13% Similarity=0.118 Sum_probs=261.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC
Q ss_conf 65766999999999981999889999999999999999999999998650828999999999999999851001101110
Q gi|254780967|r 16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML 95 (398)
Q Consensus 16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~ 95 (398)
T Consensus 14 PalTSvgPLL~~~R~~lgmS~~~AG-LLT~LP~L~fa~l~~~Ap~LarRfG~eR~v~~~Ll~i~aG~l~R~~~~~~~~Lf 92 (372)
T TIGR00896 14 PALTSVGPLLEEVRSALGMSASVAG-LLTALPVLCFAVLAPLAPKLARRFGEERSVLAGLLLIAAGILIRESAPGTALLF 92 (372)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 9997488789999877351588899-987578999998887545887662527999999999999999830477305999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHH
Q ss_conf 0223210011111110001233210001111221223310001111111111222211111-101456788888777788
Q gi|254780967|r 96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-WIGIFVCMGVITTFITLW 174 (398)
Q Consensus 96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-Wr~~f~~~~~~~~~~~~~ 174 (398)
T Consensus 93 ~gtal~G~GIai~nVLlP~lIKR~Fp-~~~g~m~GlYs~al~~gaaLaaa~tVPL~~~~~g~W~~~L~~W~~~allAll~ 171 (372)
T TIGR00896 93 AGTALAGVGIAIINVLLPSLIKRDFP-ERVGLMTGLYSMALALGAALAAAATVPLAQALGGRWQQALALWALLALLALLL 171 (372)
T ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999998999977570301002145-54304678999999988766613324556246784189999999999999982
Q ss_pred HHHHCCCCCC----------HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 8761678864----------022101111112333100000000025677788763100146888765455431531101
Q gi|254780967|r 175 YYIRFPETLD----------PRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF 244 (398)
Q Consensus 175 ~~~~~pet~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T Consensus 172 W~PQ~r~~~a~~~~~~~APrPedGrs-aekrael~~~~i~rsp~AW~vt~f~GL~s~~~Y~~igWlP~Ili~~G~sa~~A 250 (372)
T TIGR00896 172 WLPQVRRRKAANQTAKRAPRPEDGRS-AEKRAELTPKRIWRSPLAWQVTVFFGLQSLLYYIVIGWLPAILISHGVSAATA 250 (372)
T ss_pred CCHHHCCCCCHHHCCCCCCCCCCCCC-HHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 02020142151102677978877640-33330157652131505899999998999999999999999998638877568
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 58899886576778899999850015651246887788899999999873257776403799899899999999999999
Q gi|254780967|r 245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS 324 (398)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (398)
T Consensus 251 G~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G-~~Gl~~~P-~~~---~~~-iW~~~~G~G~G~~f~LaL 324 (372)
T TIGR00896 251 GLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVG-LCGLLFAP-LHG---LWA-IWALVLGLGQGGAFSLAL 324 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-HHHHHHHH-HHH---HHH-HHHHHHHHCCCHHHHHHH
T ss_conf 999999999987689998899704885699999999999999-99999850-459---999-999998301203699999
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99985--346676999999999999999999999999983117
Q gi|254780967|r 325 SISME--PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT 365 (398)
Q Consensus 325 ~~~~~--~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~ 365 (398)
T Consensus 325 tli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g 367 (372)
T TIGR00896 325 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISG 367 (372)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999962168899999888788999998645888888872156