HHsearch alignment for GI: 254780967 and conserved domain: TIGR00897

>TIGR00897 2A0118 polyol permease; InterPro: IPR004748 Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.89  E-value=1.9e-20  Score=129.18  Aligned_cols=330  Identities=11%  Similarity=0.111  Sum_probs=228.1

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HCC-CCHHHHCCCCCC
Q ss_conf             9999998199988999999999999999999999999865082899999999999999985---100-110111002232
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM---VTI-NSFTGMLCMRLI  100 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~---~~a-~~~~~l~~~r~l  100 (398)
T Consensus        41 LSpfl~~~Gls~~~sa-s~Ft~YGiA~aisaW~SGv~~e~~gp~kTM~~Gll~~~~g~aaFivfg~~h~nyp~~l~~Y~~  119 (411)
T TIGR00897        41 LSPFLVELGLSVQQSA-SLFTLYGIAVAISAWLSGVVVEIIGPKKTMMIGLLLYVVGSAAFIVFGLEHLNYPLLLLFYAI  119 (411)
T ss_pred             HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             3289996188887899-999999999999988888999864221678999999999999999986888889999998888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             1001111111000123321000111122122331000111-111111122221111110145678888877778887616
Q gi|254780967|r  101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMP-ILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRF  179 (398)
Q Consensus       101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~-~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~  179 (398)
T Consensus       120 rGlgYPLFaYSFlvwv~y~~~~~~ls~AvGWFW~~y~~G~~VfG~~ysSyaip-afGe~nTLWsal~fv~~Gg~~AL~~~  198 (411)
T TIGR00897       120 RGLGYPLFAYSFLVWVVYNTKQDKLSSAVGWFWIVYSIGLGVFGSYYSSYAIP-AFGELNTLWSALLFVLTGGVLALFIN  198 (411)
T ss_pred             HHCCCHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             84021788887672220212411003317899999997465430122012555-30323468999999999899999987


Q ss_pred             CCCCCHHHHC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHH
Q ss_conf             7886402210----1111112333100000000025677788763100146888765455431531101-5889988657
Q gi|254780967|r  180 PETLDPRDVR----PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF-PIAFAVGGFA  254 (398)
Q Consensus       180 pet~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  254 (398)
T Consensus       199 kd~ftp~~~qnlt~~ek~~EL~ka~TilftNp~vl~gg~vriIN~ig~fGFavflPmm~~a~~G~StseWLQiWg~~Ff~  278 (411)
T TIGR00897       199 KDKFTPKKKQNLTTREKFEELGKAVTILFTNPKVLLGGVVRIINTIGLFGFAVFLPMMFLAELGFSTSEWLQIWGTLFFT  278 (411)
T ss_pred             HHCCCHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             52058066524666700677740000201078400002788776132213467635899976387402589999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             67788999998500156512468-87788899999999873257776403799899899999999999999999853466
Q gi|254780967|r  255 MSIASFINSRLVEKFGIRRVSHY-SLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSH  333 (398)
Q Consensus       255 ~~~~~~~~~~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
T Consensus       279 nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P--~~~Ghs~av~~iia~~~G~~lAgy-VPl~A~~Ptlapk  355 (411)
T TIGR00897       279 NIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIP--QFIGHSFAVVLIIAIIYGILLAGY-VPLAAVLPTLAPK  355 (411)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCC
T ss_conf             9999999975414468731667637645899999998656--652258999999999999999866-3488742234899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             769999999999999999999999999
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQS  360 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~  360 (398)
T Consensus       356 ~KGAA~SVlNL~a-GlsaF~aPaia~l  381 (411)
T TIGR00897       356 DKGAAMSVLNLSA-GLSAFVAPAIAVL  381 (411)
T ss_pred             CCCHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf             8731564888886-2887888999999