HHsearch alignment for GI: 254780967 and conserved domain: TIGR00903

>TIGR00903 2A0129 major facilitator 4 family protein; InterPro: IPR005277 The MFS is a very old, large and diverse superfamily that includes several hundred sequenced members. They catalyze uniport, solute:cation (H+ or Na+) symport and/or solute:H+ or solute:solute antiport. Most are of 400-600 amino acyl residues in length and possess either 12 or 14 putative transmembrane a-helical spanners. They exhibit specificity for sugars, polyols, drugs, neurotransmitters, Krebs cycle metabolites, phosphorylated glycolytic intermediates, amino acids, peptides, osmolites, nucleosides, organic anions, inorganic anions, etc. They are found ubiquitously in all three kingdoms of living organisms. The generalized transport reactions catalyzed by MFS porters are: (1)Uniport: S (out) S (in). (2)Symport: S (out) + [H+ or Na+] (out) ---> S (in) + [H+ or Na+] (in). (3)Antiport: S1 (out) + S2 (in) S1 (in) + S2 (out), (S1 may be H+ or a solute) This family of proteins are uncharacterised proteins from archaea, which may be major facilitators. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. .
Probab=99.63  E-value=5.2e-14  Score=93.76  Aligned_cols=353  Identities=15%  Similarity=0.209  Sum_probs=205.1

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHCCCC
Q ss_conf             699999999998199988999999999999999999999999865082899999999999999985100-1101110022
Q gi|254780967|r   20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-NSFTGMLCMR   98 (398)
Q Consensus        20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-~~~~~l~~~r   98 (398)
T Consensus         9 TySPV~~LV~E~~~VS~E~~GLLA~-~YP~~FL~LTIPSG~LLDR~F~~-Wl~~G~~~T~~A~~~RL~~Pl~Y~WLL~CQ   86 (368)
T TIGR00903         9 TYSPVLSLVAEDLDVSKELLGLLAV-VYPIAFLILTIPSGLLLDRDFKR-WLLVGVLLTFAAAVLRLLDPLSYEWLLVCQ   86 (368)
T ss_pred             EHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             2100357765223443888989999-99999999860422443266768-999999999988998730500078999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32100111111100012332100011112212233100011111111112222111111014567888887777888761
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~  178 (398)
T Consensus        87 ~~~ALGQPlLLN~F~P~AS~~~-~ERR~~V~S~LSl~MYLG~~yAL~~G-~~~YT~~GL~~L~~P~A~V~~A~~~L~~~~  164 (368)
T TIGR00903        87 LLAALGQPLLLNAFVPAASTLR-EERRDLVVSLLSLAMYLGIVYALAAG-LKLYTALGLTLLILPIAVVAAASVVLVLIA  164 (368)
T ss_pred             HHHHHCCHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9986154157762123001335-13578999999999999999998757-999998558999878999988899999986


Q ss_pred             CCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             67886402210111111233310000000002567778876310014688876545543153110158899886576778
Q gi|254780967|r  179 FPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIA  258 (398)
Q Consensus       179 ~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (398)
T Consensus       165 ~~A-~~~~~~~~lGfkd~V~~F~~~~~R~DLW~~G~ILGlGVA~FDNl~~WL~~A-L~~~GL~~~AG~~VALA~~~GL~G  242 (368)
T TIGR00903       165 LRA-LRFTKAESLGFKDVVKEFRLLLKRKDLWLLGLILGLGVALFDNLAIWLEAA-LRSKGLEDVAGDAVALALLLGLVG  242 (368)
T ss_pred             HHC-CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             311-110012346458899987886403238989899976899987899998762-071461121024999999982401


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-H
Q ss_conf             89999985001565124688778889999999987325777640379989989999999999999999985----346-6
Q gi|254780967|r  259 SFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME----PFS-H  333 (398)
Q Consensus       259 ~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~  333 (398)
T Consensus       243 VAVIP~RV~R~~LR~~Y~R~~--~~L~A~ly~~LAl~~~----~~~~~~l~~~~G----L~MLPAY~~IM~WI~~y~D~~  312 (368)
T TIGR00903       243 VAVIPDRVVRVNLRSIYIRAI--ALLVAVLYLILALELS----RLLLFALLGLAG----LLMLPAYAVIMDWISKYYDKR  312 (368)
T ss_pred             EEECCCCEEEHHHHHHHHHHH--HHHHHHHHHHHHHHHH----HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCC
T ss_conf             314487303300689999999--9999999999998888----999999875778----886115889998764540642


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             76999999999999999999999999983117999999999999999999999422
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKN  389 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (398)
T Consensus       313 ~~G~A~G~~Gl~SR~~~V~L~~~A~~F~S-S~~~YFTyL~~~~T~AF~~~LLLP~D  367 (368)
T TIGR00903       313 LQGKAAGAVGLVSRILSVALALAATLFLS-SAELYFTYLAVLITVAFILALLLPSD  367 (368)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             04430215888999999999999999853-48899999999999999999708899