Query         gi|254780967|ref|YP_003065380.1| probable multidrug resistance transporter protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 398
No_of_seqs    418 out of 18170
Neff          10.5
Searched_HMMs 39220
Date          Tue May 31 17:27:16 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780967.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PRK10473 multidrug efflux syst 100.0       0       0  421.7  29.7  385    2-398     3-388 (392)
  2 PRK11652 emrD multidrug resist 100.0       0       0  418.7  30.2  383    1-393     7-390 (394)
  3 PRK11043 inner membrane transp 100.0       0       0  418.4  29.8  384    2-395     6-389 (401)
  4 TIGR00710 efflux_Bcr_CflA drug 100.0       0       0  424.0  23.8  381    2-385     5-398 (400)
  5 PRK11102 bicyclomycin/multidru 100.0       0       0  407.3  28.1  375   13-392     2-377 (377)
  6 PRK11551 putative 3-hydroxyphe 100.0       0       0  311.4  33.8  382    2-394    12-403 (406)
  7 PRK10091 MFS transport protein 100.0       0       0  307.4  30.5  375    6-395     7-384 (389)
  8 PRK03545 sugar efflux transpor 100.0       0       0  306.7  30.9  378    2-395     7-389 (390)
  9 PRK10504 multidrug efflux syst 100.0       0       0  302.6  33.7  379    2-388     9-452 (471)
 10 PRK11663 regulatory protein Uh 100.0       0       0  303.8  29.1  381   12-397    33-434 (434)
 11 PRK09874 drug efflux system pr 100.0       0       0  290.3  30.8  378    4-396    14-403 (406)
 12 PRK11273 glpT sn-glycerol-3-ph 100.0       0       0  292.7  28.2  389    5-397    32-445 (452)
 13 PRK12307 putative sialic acid  100.0       0       0  278.3  31.3  353   11-371    27-391 (426)
 14 TIGR00711 efflux_EmrB drug res 100.0       0       0  278.7  29.1  354    5-363     5-416 (501)
 15 PRK03893 putative sialic acid  100.0       0       0  271.8  31.8  358    5-370    16-428 (486)
 16 PRK11646 multidrug resistance  100.0       0       0  270.5  28.4  378    6-398    14-400 (400)
 17 PRK05122 major facilitator sup 100.0 1.4E-45       0  267.3  28.9  350    5-376    20-379 (395)
 18 COG2814 AraJ Arabinose efflux  100.0 1.4E-45       0  267.8  27.7  339   16-368    25-366 (394)
 19 TIGR00895 2A0115 MFS transport 100.0 1.4E-45       0  268.7  22.9  349    4-360    19-412 (413)
 20 PRK10213 nepI ribonucleoside t 100.0 3.8E-44       0  259.9  30.2  350    3-368    19-371 (394)
 21 PRK03699 hypothetical protein; 100.0 7.6E-44       0  258.2  30.7  350    3-366     8-358 (394)
 22 pfam07690 MFS_1 Major Facilita 100.0 1.8E-44       0  261.6  25.9  337   10-354     4-345 (345)
 23 PRK09556 uhpT sugar phosphate  100.0 1.7E-43       0  256.3  28.0  339   20-364    48-414 (463)
 24 PRK12382 hypothetical protein; 100.0 1.9E-42       0  250.5  28.5  362    5-388    18-390 (393)
 25 TIGR00893 2A0114 d-galactonate 100.0 3.9E-42       0  248.8  25.2  343   21-365    13-403 (427)
 26 PRK10054 putative MFS-type tra 100.0 3.1E-41 1.4E-45  243.8  28.0  373    7-395    12-389 (395)
 27 TIGR00881 2A0104 phosphoglycer 100.0 9.6E-41 2.8E-45  241.1  22.2  342   21-364    14-392 (404)
 28 COG2271 UhpC Sugar phosphate p 100.0 1.2E-40 2.8E-45  240.5  22.5  369   20-392    47-439 (448)
 29 cd06174 MFS The Major Facilita 100.0 1.1E-38 2.8E-43  229.7  31.5  328    6-368     3-332 (352)
 30 pfam00083 Sugar_tr Sugar (and  100.0 2.7E-38 6.9E-43  227.6  27.3  366   22-391    22-439 (449)
 31 pfam06609 TRI12 Fungal trichot 100.0 2.2E-38 5.6E-43  228.1  22.6  345    9-361    51-465 (598)
 32 PRK10642 proline/glycine betai 100.0 3.2E-36 8.3E-41  216.2  32.0  374   11-389    25-432 (490)
 33 PRK09952 shikimate transporter 100.0 1.8E-35 4.7E-40  212.0  32.2  377   11-391    31-437 (438)
 34 PRK10406 alpha-ketoglutarate t 100.0 1.4E-35 3.5E-40  212.7  29.4  373   11-392    31-429 (432)
 35 PRK09705 cynX putative cyanate 100.0 2.9E-35 7.4E-40  210.9  30.6  362   16-394    23-387 (393)
 36 PRK10489 enterobactin exporter 100.0   5E-34 1.3E-38  204.1  29.1  379    9-398    24-410 (416)
 37 COG2223 NarK Nitrate/nitrite t 100.0 3.1E-35   8E-40  210.7  22.8  375    7-390    18-404 (417)
 38 PRK10077 xylE D-xylose transpo 100.0 7.9E-34   2E-38  203.0  29.6  353    2-358     8-427 (486)
 39 PRK03633 putative MFS family t 100.0 5.2E-34 1.3E-38  204.0  28.5  362    6-394    10-376 (381)
 40 KOG2532 consensus              100.0 2.7E-35 6.8E-40  211.1  21.6  345   29-376    65-433 (466)
 41 KOG1330 consensus              100.0 3.2E-37 8.2E-42  221.7   9.7  354    6-362    37-411 (493)
 42 PRK10133 L-fucose transporter; 100.0 2.9E-33 7.5E-38  199.8  29.4  350    5-365    29-409 (438)
 43 TIGR00898 2A0119 cation transp 100.0 9.7E-34 2.5E-38  202.5  25.6  364   24-393   124-553 (557)
 44 TIGR00883 2A0106 MFS transport 100.0 2.8E-33   7E-38  200.0  25.9  326   35-363    28-393 (413)
 45 TIGR00894 2A0114euk Na(+)-depe 100.0 3.5E-33 8.9E-38  199.4  18.6  354   25-382    80-472 (514)
 46 pfam05977 DUF894 Bacterial pro 100.0 4.2E-31 1.1E-35  187.9  28.4  375    9-394    17-398 (524)
 47 COG0738 FucP Fucose permease [ 100.0 7.6E-32 1.9E-36  192.1  23.5  346    7-365    18-386 (422)
 48 KOG2533 consensus              100.0 8.3E-32 2.1E-36  191.8  19.2  248   22-270    66-337 (495)
 49 KOG0255 consensus              100.0 3.2E-28 8.1E-33  172.1  25.0  352   29-393   110-499 (521)
 50 TIGR00900 2A0121 H+ Antiporter 100.0 5.4E-29 1.4E-33  176.4  20.7  350   12-363     9-385 (387)
 51 TIGR00886 2A0108 nitrite trans 100.0 1.5E-29 3.8E-34  179.4  17.4  262    8-271     6-368 (472)
 52 KOG0254 consensus              100.0 4.9E-28 1.2E-32  171.1  24.9  332   20-355    65-449 (513)
 53 pfam03825 Nuc_H_symport Nucleo 100.0 1.8E-26 4.5E-31  162.5  31.6  378    5-389     5-397 (400)
 54 COG2807 CynX Cyanate permease  100.0 2.4E-27 6.2E-32  167.2  26.5  361   17-393    27-391 (395)
 55 KOG2504 consensus              100.0 7.3E-28 1.9E-32  170.1  23.8  344   23-374    67-462 (509)
 56 TIGR00896 CynX cyanate transpo 100.0 3.2E-27 8.2E-32  166.6  26.2  341   16-365    14-367 (372)
 57 KOG3764 consensus              100.0 6.4E-30 1.6E-34  181.5  11.9  326   28-363    97-429 (464)
 58 TIGR00879 SP MFS transporter,  100.0 2.4E-28   6E-33  172.8  19.8  345   16-362    87-526 (572)
 59 TIGR00891 2A0112 MFS transport 100.0 3.7E-29 9.4E-34  177.3  10.9  332   23-363    33-426 (453)
 60 KOG2615 consensus              100.0 3.7E-27 9.4E-32  166.2  18.6  316   38-361    68-412 (451)
 61 KOG0569 consensus              100.0 4.9E-26 1.2E-30  160.0  23.8  362   30-393    47-461 (485)
 62 TIGR00892 2A0113 monocarboxyla 100.0 3.9E-27 9.9E-32  166.1  17.7  352    3-365    25-415 (475)
 63 PRK11902 ampG muropeptide tran 100.0 2.5E-25 6.5E-30  156.1  26.8  373   16-396    13-399 (402)
 64 TIGR00880 2_A_01_02 Multidrug  100.0 4.1E-29 1.1E-33  177.0   3.9  137   46-182     2-148 (148)
 65 PRK11128 putative 3-phenylprop  99.9 9.7E-24 2.5E-28  147.4  30.4  361   13-390    15-378 (383)
 66 TIGR00899 2A0120 sugar efflux   99.9 4.6E-24 1.2E-28  149.2  26.9  354   16-385    11-371 (377)
 67 pfam01306 LacY_symp LacY proto  99.9 1.1E-23 2.7E-28  147.1  28.5  352    7-370    12-382 (413)
 68 TIGR00712 glpT glycerol-3-phos  99.9 8.5E-26 2.2E-30  158.7  16.3  362   23-388    50-464 (468)
 69 PRK11195 major facilitator fam  99.9 2.5E-24 6.4E-29  150.6  23.8  371    9-393    10-400 (415)
 70 TIGR00890 2A0111 Oxalate/Forma  99.9 1.5E-24 3.8E-29  151.9  22.6  371    2-381     2-425 (429)
 71 PRK09528 lacY galactoside perm  99.9 8.5E-23 2.2E-27  142.2  30.4  376    6-393    12-408 (418)
 72 PRK08633 2-acyl-glycerophospho  99.9 3.4E-22 8.6E-27  138.9  27.1  365   11-383    19-408 (1150)
 73 PRK06814 acylglycerophosphoeth  99.9 8.5E-22 2.2E-26  136.7  25.2  339   10-350    20-384 (1139)
 74 PRK09584 tppB putative tripept  99.9 5.6E-20 1.4E-24  126.6  32.7  350    7-360    26-441 (500)
 75 PRK11010 ampG muropeptide tran  99.9 3.5E-21 8.9E-26  133.3  25.1  365   19-391    29-406 (490)
 76 PRK10429 melibiose:sodium symp  99.9   6E-21 1.5E-25  132.0  20.9  334   25-362    30-392 (473)
 77 PRK09669 putative symporter Ya  99.9 2.6E-20 6.6E-25  128.5  23.7  328   25-361    31-384 (442)
 78 KOG0252 consensus               99.9 2.8E-22 7.2E-27  139.3  13.4  345   38-387    84-498 (538)
 79 TIGR00897 2A0118 polyol permea  99.9 1.9E-20   5E-25  129.2  22.2  330   25-360    41-381 (411)
 80 TIGR02332 HpaX 4-hydroxyphenyl  99.9 8.9E-22 2.3E-26  136.6  14.4  332   26-365    32-397 (412)
 81 PRK10207 inner membrane transp  99.9 2.5E-18 6.3E-23  117.6  31.5  167    6-174    18-189 (490)
 82 KOG2563 consensus               99.9 3.6E-21 9.3E-26  133.2  15.6  389    2-396    43-459 (480)
 83 pfam11700 ATG22 Vacuole efflux  99.9 1.3E-18 3.4E-23  119.1  26.6  354   42-395    73-476 (477)
 84 PRK12382 hypothetical protein;  99.9 4.8E-21 1.2E-25  132.5  10.0  165   12-180   226-390 (393)
 85 PRK09874 drug efflux system pr  99.8 4.4E-21 1.1E-25  132.8   9.2  172    9-181   224-398 (406)
 86 KOG0253 consensus               99.8 9.9E-20 2.5E-24  125.3  15.5  366    8-388    80-520 (528)
 87 TIGR00885 fucP L-fucose:H+ sym  99.8 5.9E-19 1.5E-23  121.0  19.1  350    1-364     3-398 (427)
 88 pfam03137 OATP Organic Anion T  99.8 7.3E-20 1.9E-24  126.0  14.1  269    4-275     5-372 (582)
 89 PRK11462 putative transporter;  99.8   5E-19 1.3E-23  121.4  18.2  329   24-362    32-386 (460)
 90 COG2211 MelB Na+/melibiose sym  99.8 9.5E-19 2.4E-23  119.9  17.9  330   26-362    37-395 (467)
 91 COG3104 PTR2 Dipeptide/tripept  99.8 2.1E-16 5.5E-21  106.9  28.8  317   23-343    43-436 (498)
 92 PRK05122 major facilitator sup  99.8 5.6E-20 1.4E-24  126.6   9.6  164   13-180   229-392 (395)
 93 COG2270 Permeases of the major  99.8 6.3E-17 1.6E-21  109.8  23.8  347   42-396    62-435 (438)
 94 PRK09848 glucuronide transport  99.8 2.5E-17 6.3E-22  112.1  21.5  325   25-362    32-387 (457)
 95 pfam03209 PUCC PUCC protein. T  99.8 2.4E-17 6.2E-22  112.1  21.0  352   28-386     6-393 (402)
 96 KOG2325 consensus               99.8   4E-19   1E-23  121.9   6.5  241    3-245    35-300 (488)
 97 KOG2816 consensus               99.8 7.5E-17 1.9E-21  109.4  17.9  335   16-364    36-393 (463)
 98 TIGR00792 gph sugar (Glycoside  99.8   1E-15 2.6E-20  103.1  23.5  334   25-362    23-406 (470)
 99 PRK11551 putative 3-hydroxyphe  99.8 4.2E-18 1.1E-22  116.3  10.2  160   20-180   238-397 (406)
100 KOG4686 consensus               99.8 3.8E-18 9.8E-23  116.5   9.5  352   27-390    69-446 (459)
101 pfam05631 DUF791 Protein of un  99.7 5.5E-17 1.4E-21  110.2  11.5  243   23-269    55-305 (354)
102 PRK03633 putative MFS family t  99.7 2.6E-17 6.5E-22  112.0   8.9  157   16-177   214-370 (381)
103 TIGR00902 2A0127 MFS transport  99.7 3.7E-14 9.5E-19   94.5  25.0  355   15-389    17-378 (388)
104 TIGR00887 2A0109 phosphate:H+   99.7   1E-17 2.6E-22  114.2   6.5  353   42-396    70-553 (557)
105 pfam03092 BT1 BT1 family. Memb  99.7 5.6E-15 1.4E-19   99.1  18.9  333   23-360    11-370 (425)
106 PRK10642 proline/glycine betai  99.7 1.7E-16 4.3E-21  107.5  10.0  164   20-187   268-437 (490)
107 TIGR00882 2A0105 oligosacchari  99.7 8.3E-14 2.1E-18   92.6  22.2  351   12-375    12-383 (397)
108 KOG3626 consensus               99.7 9.1E-17 2.3E-21  108.9   6.3  269    3-273    98-460 (735)
109 PRK10054 putative MFS-type tra  99.6 1.3E-15 3.2E-20  102.7  10.1  149   30-181   237-386 (395)
110 PRK12307 putative sialic acid   99.6 1.2E-15 3.1E-20  102.8   9.9   37   43-79    147-183 (426)
111 TIGR00903 2A0129 major facilit  99.6 5.2E-14 1.3E-18   93.8  16.9  353   20-389     9-367 (368)
112 PRK10489 enterobactin exporter  99.6   3E-15 7.7E-20  100.6   9.1  158   22-181   243-400 (416)
113 PRK03893 putative sialic acid   99.6 3.4E-15 8.7E-20  100.3   9.3  156   25-182   291-450 (486)
114 PRK03545 sugar efflux transpor  99.6 3.6E-15 9.1E-20  100.2   9.1  151   26-179   230-380 (390)
115 PTZ00207 hypothetical protein;  99.6 4.9E-13 1.3E-17   88.4  19.2  114   26-142    51-170 (591)
116 PRK11646 multidrug resistance   99.6 7.3E-15 1.9E-19   98.5   9.7  156   23-180   229-389 (400)
117 TIGR00889 2A0110 nucleoside tr  99.5 1.9E-12 4.8E-17   85.1  17.9  384    5-398     5-431 (435)
118 cd06174 MFS The Major Facilita  99.5 5.2E-14 1.3E-18   93.8   9.5  152   23-176   196-349 (352)
119 PRK11663 regulatory protein Uh  99.5 6.6E-14 1.7E-18   93.2  10.0   40   45-84    154-194 (434)
120 TIGR00924 yjdL_sub1_fam amino   99.5 9.9E-12 2.5E-16   81.2  20.7  151   31-184    49-205 (501)
121 PRK10091 MFS transport protein  99.5 6.5E-14 1.6E-18   93.2   9.3  150   26-177   224-374 (389)
122 pfam01306 LacY_symp LacY proto  99.5 1.2E-13 3.1E-18   91.7   9.4   16   72-87    145-160 (413)
123 PRK09528 lacY galactoside perm  99.5 6.5E-13 1.7E-17   87.7  10.3   16   72-87    146-161 (418)
124 TIGR02718 sider_RhtX_FptX side  99.5 4.7E-11 1.2E-15   77.4  19.8  370    3-386     2-388 (391)
125 PRK09705 cynX putative cyanate  99.5 5.5E-13 1.4E-17   88.1   9.6   47  318-364   314-360 (393)
126 PRK10504 multidrug efflux syst  99.4 1.2E-12 3.1E-17   86.2  10.0   35   47-81    143-177 (471)
127 PRK09556 uhpT sugar phosphate   99.4 1.3E-12 3.4E-17   86.0   9.9   12  385-396   445-456 (463)
128 pfam07690 MFS_1 Major Facilita  99.4 8.3E-13 2.1E-17   87.1   8.8   32  244-275    34-65  (345)
129 TIGR00805 oat sodium-independe  99.4 8.1E-13 2.1E-17   87.2   8.4  254   16-271    47-465 (723)
130 PRK03699 hypothetical protein;  99.4   9E-13 2.3E-17   86.9   8.6   68  328-395   324-391 (394)
131 PRK11128 putative 3-phenylprop  99.4 1.5E-12 3.9E-17   85.7   9.4   21   49-69    139-159 (383)
132 PRK11902 ampG muropeptide tran  99.4 1.4E-12 3.6E-17   85.8   9.1   60  337-396   343-402 (402)
133 pfam03825 Nuc_H_symport Nucleo  99.4 2.7E-12 6.8E-17   84.3  10.4   20  252-271   348-367 (400)
134 PRK11273 glpT sn-glycerol-3-ph  99.4 1.1E-10 2.9E-15   75.3  18.7   46  351-396   402-447 (452)
135 KOG2504 consensus               99.4 6.5E-13 1.7E-17   87.7   5.3  164   12-176   308-473 (509)
136 TIGR00883 2A0106 MFS transport  99.3   4E-12   1E-16   83.3   8.1  135   32-167   266-408 (413)
137 COG0477 ProP Permeases of the   99.3 3.6E-11 9.2E-16   78.1  12.6  155   16-171    16-177 (338)
138 pfam01770 Folate_carrier Reduc  99.3 5.7E-11 1.4E-15   77.0  13.3  310   30-346    33-383 (410)
139 KOG3098 consensus               99.3 1.3E-08 3.3E-13   64.0  24.8  311   39-352    51-403 (461)
140 PRK08633 2-acyl-glycerophospho  99.3 1.5E-11 3.9E-16   80.2   8.6  163   20-182   255-418 (1150)
141 TIGR00895 2A0115 MFS transport  99.3 3.4E-09 8.8E-14   67.2  19.5  160  229-396    39-207 (413)
142 PRK11010 ampG muropeptide tran  99.3 3.9E-10   1E-14   72.4  14.6  167   15-183   235-406 (490)
143 COG2223 NarK Nitrate/nitrite t  99.3 5.4E-11 1.4E-15   77.1  10.0  160   11-178   229-400 (417)
144 COG2814 AraJ Arabinose efflux   99.3 2.6E-11 6.6E-16   78.9   7.8  143   27-173   237-380 (394)
145 KOG4332 consensus               99.2 1.5E-10 3.8E-15   74.7  11.7  309   30-347    65-387 (454)
146 KOG3762 consensus               99.2 5.4E-09 1.4E-13   66.1  19.4  153  202-362   366-520 (618)
147 TIGR00890 2A0111 Oxalate/Forma  99.2 4.1E-11   1E-15   77.8   8.4  145   26-172   266-427 (429)
148 pfam06963 FPN1 Ferroportin1 (F  99.2 7.9E-09   2E-13   65.2  19.7  341   13-361    13-416 (433)
149 COG2270 Permeases of the major  99.2 8.1E-11 2.1E-15   76.1   9.2  154   27-182   277-431 (438)
150 PRK10473 multidrug efflux syst  99.2 1.5E-08 3.8E-13   63.7  20.5   27  368-394   361-387 (392)
151 PRK10213 nepI ribonucleoside t  99.2 1.1E-10 2.7E-15   75.5   9.4   23   49-71    155-177 (394)
152 PRK11652 emrD multidrug resist  99.2 4.6E-09 1.2E-13   66.5  17.2   26  372-397   366-391 (394)
153 pfam05977 DUF894 Bacterial pro  99.2 3.9E-08   1E-12   61.3  21.6  159   21-181   237-397 (524)
154 PRK11102 bicyclomycin/multidru  99.2 5.3E-09 1.3E-13   66.2  17.0   34   44-77    121-154 (377)
155 TIGR00892 2A0113 monocarboxyla  99.2   1E-10 2.6E-15   75.6   7.0  155   20-175   275-435 (475)
156 KOG0569 consensus               99.1 4.4E-10 1.1E-14   72.1   9.7  157   26-185   294-460 (485)
157 TIGR00899 2A0120 sugar efflux   99.1 3.7E-10 9.3E-15   72.5   8.8  158   19-180   216-376 (377)
158 COG2271 UhpC Sugar phosphate p  99.1   2E-09 5.2E-14   68.4  11.9  130  230-367    52-185 (448)
159 PRK11043 inner membrane transp  99.1 8.1E-08 2.1E-12   59.6  19.1   24   49-72    141-164 (401)
160 TIGR01272 gluP glucose/galacto  99.0 2.2E-08 5.7E-13   62.7  14.7  278   91-380    10-316 (322)
161 TIGR00879 SP MFS transporter,   99.0 1.4E-09 3.7E-14   69.3   8.4  111  243-358   135-246 (572)
162 PRK06814 acylglycerophosphoeth  99.0 2.5E-09 6.4E-14   67.9   8.5  162   20-182   244-426 (1139)
163 PRK11195 major facilitator fam  99.0 6.4E-09 1.6E-13   65.7   9.9   21  375-395   385-405 (415)
164 COG2807 CynX Cyanate permease   99.0 1.2E-08 3.1E-13   64.1  10.9   29    8-36     50-78  (395)
165 TIGR00711 efflux_EmrB drug res  98.9 2.3E-08 5.8E-13   62.7  11.9  118   25-143   282-406 (501)
166 pfam00854 PTR2 POT family. The  98.9 1.1E-07 2.8E-12   58.9  15.2  107   69-176     2-119 (372)
167 TIGR00893 2A0114 d-galactonate  98.9 2.7E-07 6.9E-12   56.7  17.1  134  231-365    17-156 (427)
168 pfam06813 Nodulin-like Nodulin  98.9 9.3E-09 2.4E-13   64.8   9.1  151   26-181    26-183 (248)
169 KOG0637 consensus               98.9 1.9E-08 4.9E-13   63.1  10.1  252   23-280    53-370 (498)
170 TIGR00881 2A0104 phosphoglycer  98.9 5.2E-08 1.3E-12   60.7  12.0  132  227-362    15-148 (404)
171 TIGR00710 efflux_Bcr_CflA drug  98.9 1.8E-06 4.6E-11   52.2  19.7  170  218-395    16-192 (400)
172 KOG3762 consensus               98.9 1.8E-09 4.7E-14   68.7   3.9   72   18-90     27-99  (618)
173 pfam06779 DUF1228 Protein of u  98.9 2.8E-08   7E-13   62.2   9.6   80   12-95      5-84  (85)
174 KOG3574 consensus               98.8   4E-07   1E-11   55.8  14.7  331   24-363    52-431 (510)
175 TIGR00900 2A0121 H+ Antiporter  98.8 6.8E-09 1.7E-13   65.6   5.6  117  234-350    28-148 (387)
176 TIGR00897 2A0118 polyol permea  98.8 3.6E-09 9.1E-14   67.1   4.1  158   12-175   243-406 (411)
177 KOG3764 consensus               98.8 1.6E-09 4.2E-14   69.0   2.1  140  241-388   105-249 (464)
178 KOG4686 consensus               98.8 2.6E-08 6.6E-13   62.4   7.9   98   61-161    15-113 (459)
179 TIGR01299 synapt_SV2 synaptic   98.8 6.8E-10 1.7E-14   71.0  -0.2  157   23-182   188-357 (742)
180 pfam06609 TRI12 Fungal trichot  98.7 1.3E-06 3.2E-11   53.0  14.4   18  372-389   539-556 (598)
181 TIGR00896 CynX cyanate transpo  98.7 8.2E-08 2.1E-12   59.6   8.2   23  126-148   118-140 (372)
182 PRK09584 tppB putative tripept  98.7 3.6E-06 9.2E-11   50.5  15.9   72   15-87    123-199 (500)
183 TIGR00901 2A0125 AmpG-related   98.7 1.1E-05 2.8E-10   47.9  18.3  157   24-184    10-205 (531)
184 pfam02487 CLN3 CLN3 protein. T  98.6   4E-06   1E-10   50.3  14.9  130   46-181    62-193 (409)
185 TIGR00880 2_A_01_02 Multidrug   98.6 9.5E-06 2.4E-10   48.2  16.8  112  246-362     2-115 (148)
186 TIGR00886 2A0108 nitrite trans  98.6 1.7E-05 4.4E-10   46.8  17.6   58  233-291   334-391 (472)
187 TIGR00898 2A0119 cation transp  98.6 7.2E-07 1.8E-11   54.4   9.3  116  245-368   143-260 (557)
188 pfam03219 TLC TLC ATP/ADP tran  98.5 3.6E-05 9.1E-10   45.0  17.2  267    4-276    26-353 (491)
189 PRK10207 inner membrane transp  98.5 2.3E-05 5.8E-10   46.1  15.7   69   17-86    118-191 (490)
190 KOG0255 consensus               98.5   5E-05 1.3E-09   44.2  18.1  112  243-362   119-231 (521)
191 TIGR00891 2A0112 MFS transport  98.5 1.4E-08 3.5E-13   63.8  -1.2  117  234-358    38-156 (453)
192 TIGR00889 2A0110 nucleoside tr  98.5 1.8E-07 4.7E-12   57.7   4.4  165   26-193   249-430 (435)
193 pfam06813 Nodulin-like Nodulin  98.4 2.2E-05 5.7E-10   46.2  14.5  178  220-398    15-196 (248)
194 KOG2532 consensus               98.4 2.4E-06 6.1E-11   51.5   9.0   24   48-71    174-198 (466)
195 KOG2533 consensus               98.4 2.7E-06 6.9E-11   51.2   8.7   20  247-266   318-337 (495)
196 PRK10133 L-fucose transporter;  98.3 0.00011 2.8E-09   42.3  20.7   10  259-268   279-288 (438)
197 PRK11462 putative transporter;  98.3 3.9E-06   1E-10   50.3   7.5   12   49-60    121-132 (460)
198 PTZ00207 hypothetical protein;  98.2 6.8E-06 1.7E-10   49.0   8.0  162  199-365   345-516 (591)
199 KOG3810 consensus               98.2 1.5E-05 3.9E-10   47.0   9.5  326   21-353    20-378 (433)
200 KOG2615 consensus               98.2 4.3E-05 1.1E-09   44.6  11.1   24  252-275    78-101 (451)
201 KOG1237 consensus               98.0 0.00074 1.9E-08   37.8  21.9  150   22-173    58-239 (571)
202 KOG2325 consensus               97.9 0.00053 1.3E-08   38.6  13.0   34   49-82    110-144 (488)
203 pfam05978 UNC-93 Ion channel r  97.9 1.4E-05 3.4E-10   47.4   4.6  126   20-146    18-144 (157)
204 KOG2816 consensus               97.9   2E-05 5.2E-10   46.4   5.5   19   58-76    134-153 (463)
205 TIGR00882 2A0105 oligosacchari  97.9 6.3E-05 1.6E-09   43.7   7.3  112  207-321     2-114 (397)
206 TIGR00926 2A1704 Oligopeptide   97.9 7.7E-06   2E-10   48.7   2.4  157   27-184    29-218 (781)
207 PRK03612 spermidine synthase;   97.8 0.00023 5.9E-09   40.5   9.4  152   24-179    36-197 (516)
208 pfam07672 MFS_Mycoplasma Mycop  97.8 0.00048 1.2E-08   38.8  11.0   96  124-219     3-104 (265)
209 TIGR00712 glpT glycerol-3-phos  97.8 6.4E-06 1.6E-10   49.1   0.5  126  229-358    51-178 (468)
210 COG3104 PTR2 Dipeptide/tripept  97.7 0.00045 1.2E-08   39.0   9.9   33   49-81    166-198 (498)
211 COG3202 ATP/ADP translocase [E  97.7  0.0023 5.9E-08   35.0  21.9  263    5-273    30-353 (509)
212 KOG0252 consensus               97.5 0.00079   2E-08   37.6   8.7   35  250-284    92-126 (538)
213 TIGR00894 2A0114euk Na(+)-depe  97.3 0.00015 3.8E-09   41.6   2.3  136  235-375    84-228 (514)
214 TIGR00887 2A0109 phosphate:H+   97.1  0.0031   8E-08   34.3   8.0  114  245-359    69-186 (557)
215 PRK03612 spermidine synthase;   97.0   0.016   4E-07   30.5  18.1  113  242-356    50-164 (516)
216 TIGR00806 rfc reduced folate c  97.0   0.016 4.1E-07   30.4  20.7  326   26-357    50-422 (542)
217 pfam03137 OATP Organic Anion T  96.8    0.02 5.1E-07   29.9  14.0   12  129-140    40-51  (582)
218 KOG3098 consensus               96.8  0.0029 7.3E-08   34.5   5.4   62   45-106    23-88  (461)
219 TIGR00924 yjdL_sub1_fam amino   96.8   0.023 5.7E-07   29.6  14.5  119  239-357   324-453 (501)
220 KOG2563 consensus               96.7   0.026 6.7E-07   29.2  12.6   57  308-364   271-328 (480)
221 TIGR00788 fbt folate/biopterin  96.6   0.004   1E-07   33.8   5.1  159   22-183    52-223 (594)
222 pfam05631 DUF791 Protein of un  96.4   0.041   1E-06   28.2  16.1   85  236-328    62-147 (354)
223 pfam01733 Nucleoside_tran Nucl  96.2   0.051 1.3E-06   27.6   9.9   56  303-359   245-301 (305)
224 KOG0637 consensus               95.8   0.033 8.3E-07   28.7   6.0   20  347-366   458-477 (498)
225 KOG3880 consensus               95.4    0.12 3.1E-06   25.6   7.9  129   48-182    72-202 (409)
226 pfam02487 CLN3 CLN3 protein. T  95.0  0.0089 2.3E-07   31.8   1.1   64  298-362   338-402 (409)
227 TIGR01299 synapt_SV2 synaptic   92.5   0.058 1.5E-06   27.3   1.4  105  251-362   604-709 (742)
228 KOG2601 consensus               92.0    0.52 1.3E-05   22.1   5.8  106   54-160    79-207 (503)
229 KOG4830 consensus               89.1    0.31   8E-06   23.3   2.6   44   27-71     42-94  (412)
230 TIGR00769 AAA ADP/ATP carrier   88.1     1.2 3.1E-05   20.0   5.5  261    7-273    12-350 (491)
231 COG5336 Uncharacterized protei  85.5     1.7 4.4E-05   19.2   5.5   30  334-363    39-68  (116)
232 pfam07760 DUF1616 Protein of u  81.5     2.2 5.5E-05   18.7   3.8   80   96-177    25-107 (278)
233 KOG3097 consensus               80.6     2.7 6.9E-05   18.1  12.5   92   25-120    48-139 (390)
234 KOG1479 consensus               80.2     2.8 7.2E-05   18.0  19.7   58  303-361   344-402 (406)
235 pfam03741 TerC Integral membra  56.3     9.8 0.00025   15.1   5.9   18  112-129    17-34  (184)
236 PRK10580 proY putative proline  47.0      14 0.00036   14.2  11.8   22  377-398   436-457 (457)
237 TIGR00804 nupC nucleoside tran  45.4      10 0.00026   15.0   1.2   87  115-206   157-248 (425)
238 COG1268 BioY Uncharacterized c  43.6      16  0.0004   13.9   4.9   21  251-271    91-111 (184)
239 PRK10323 neutral amino-acid ef  41.5      17 0.00044   13.7   5.8   18  197-214   108-125 (195)
240 TIGR00427 TIGR00427 conserved   39.4      19 0.00047   13.5   6.2   76  112-188    29-105 (206)
241 pfam07099 DUF1361 Protein of u  35.2      22 0.00055   13.1   4.4   14  227-240    39-52  (169)
242 cd02434 Nodulin-21_like_3 Nodu  33.6      23 0.00059   13.0   9.2   12   66-77     30-41  (225)
243 pfam02632 BioY BioY family. A   32.6      24 0.00061   12.9   5.2   24  251-274    62-85  (148)
244 TIGR01666 YCCS hypothetical me  32.3      24 0.00062   12.9   3.2   47   56-102    41-92  (713)
245 pfam09930 DUF2162 Predicted tr  28.8      28 0.00072   12.5   8.0   13  330-342   162-174 (228)
246 pfam02990 EMP70 Endomembrane p  27.8      29 0.00075   12.4  12.6   35  245-279   297-331 (518)
247 pfam02554 CstA Carbon starvati  25.4      33 0.00083   12.2   8.6   40  118-163    48-89  (382)
248 pfam03616 Glt_symporter Sodium  24.4      34 0.00087   12.1   4.2   15   30-44     30-44  (368)
249 pfam11298 DUF3099 Protein of u  24.3      34 0.00087   12.1   2.2   31   62-92     11-41  (73)
250 COG1288 Predicted membrane pro  23.1      36 0.00092   11.9   5.8   53  122-177   186-238 (481)
251 pfam12273 RCR Chitin synthesis  22.0      38 0.00096   11.8   0.9   22  158-179     1-22  (124)
252 pfam09911 DUF2140 Uncharacteri  21.7      39 0.00098   11.8   1.0   19  156-174     2-20  (187)
253 PRK02237 hypothetical protein;  21.4      39   0.001   11.7   4.4   39  243-281    56-94  (108)

No 1  
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00  E-value=0  Score=421.71  Aligned_cols=385  Identities=24%  Similarity=0.299  Sum_probs=337.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             38999999999988657669999999999819998899999999999999999999999986508289999999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      |+++.+..+++++++++|+|+|++|+|++|||.|++++. +++|.|+++++++|+++|+++||+||||+++.|+.++.++
T Consensus         3 ~fll~~~~l~~l~plaiD~ylPalP~i~~~f~~s~~~~q-ltis~f~~g~a~~ql~~GplsD~~GRr~vll~gl~l~~i~   81 (392)
T PRK10473          3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLH-IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGALLFIIA   81 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             699999999999889999999619999999797999999-9999999999999999899999848839999999999999


Q ss_pred             HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99851001101110022321001111111000123321000111122122331000111111111122221111110145
Q gi|254780967|r   82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus        82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f  161 (398)
                      ++.|++++|+++++++|++||+|.+...+.+.++++|.+++|||+|.+++.+....++++++|.+|+.+ .+++|||++|
T Consensus        82 s~~~~~a~~~~~ll~~R~lqG~g~~~~~v~~~aii~D~~~~~~~~~~~s~~~~~~~~~p~~aP~lGg~l-~~~~gW~~~F  160 (392)
T PRK10473         82 SLLCSLAETSSLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI-MLKFPWQSLF  160 (392)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHH
T ss_conf             999998636999999999999688779999999999976999997998999999999888888899999-9874949999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             67888887777888761678864022101111112333100000000025677788763100146888765455431531
Q gi|254780967|r  162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG  241 (398)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (398)
                      +..++++++..++.++.+|||++++++++   .+..+++++.++||.++.+.++.++.+..+++|.+.+|+++++.++.+
T Consensus       161 ~~l~~~~~l~~l~~~~~lpET~~~~~~~~---~~~~~~~~~~l~~r~fl~~~l~~~l~~~~~f~fis~sp~i~~~~~gls  237 (392)
T PRK10473        161 YTMAAMGIAVLLLSLFILKETRPARAPAA---SSKPRENSESLLNRFFLSRLVITTLSVSVILTFVNTSPVLLMEQMGFE  237 (392)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_conf             99999999999999996878899876640---248999999980823799999999999999999980799999991898


Q ss_pred             C-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             1-015889988657677889999985001565124688778889999999987325777640379989989999999999
Q gi|254780967|r  242 N-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLIN  320 (398)
Q Consensus       242 ~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (398)
                      + .++..++.++.+...++++.+++.+|++.++....+........... ...  ...    ........+...+.+...
T Consensus       238 ~~~fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~~l~l~~~~~l-~~~--~~~----~~~l~~~~l~~~g~~~~~  310 (392)
T PRK10473        238 RGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITL-ALS--PSH----AVSLFGFTLICAGFSVGF  310 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHH--HHH----HHHHHHHHHHHHHHHHHH
T ss_conf             8999999999999999999999999999579999999999999999999-998--888----899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
Q ss_conf             999999985346676999999999999999999999999983117999999999999999999999422000343069
Q gi|254780967|r  321 SNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTELR  398 (398)
Q Consensus       321 ~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~r  398 (398)
                      ++.++.+++++||.+|+++++.++.|+.++++.+++.+.+.|++..+....+..+++.+.+..+++.|+|..+|+|.+
T Consensus       311 ~~~~a~Al~~~~~~AGtASal~G~~q~~~~al~~~l~~~l~~~~~~~~~~~m~~~s~lal~~~l~v~~~~~~~~~~~~  388 (392)
T PRK10473        311 GVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILIACSIVSLLLILFVAPGRPVAAHEEI  388 (392)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             999999966575141199999999999999999999998678847899999999999999999998189878676789


No 2  
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00  E-value=0  Score=418.70  Aligned_cols=383  Identities=22%  Similarity=0.366  Sum_probs=331.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             93899999999998865766999999999981999889999999999999999999999998650828999999999999
Q gi|254780967|r    1 MEFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII   80 (398)
Q Consensus         1 ~~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i   80 (398)
                      .+++++++++++++++++|+|+|++|+|++|||.|++++. +++|.|+++++++|+++|+++||+||||+++.|+.++.+
T Consensus         7 ~~~i~~l~~l~~~~~la~d~ylPalP~ia~~~~~s~~~vq-~tls~f~~g~a~~ql~~GpLSDr~GRk~vll~gl~lf~i   85 (394)
T PRK11652          7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGALQ-AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL   85 (394)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             4799999999999999998898609999999698998999-999999999999999999999882886999999999999


Q ss_pred             HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             99985100110111002232100111111100012332100011112212233100011111111112222111111014
Q gi|254780967|r   81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI  160 (398)
Q Consensus        81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~  160 (398)
                      +++.|++++|+++++++|++||+|.+...+.+.++++|.+++||++|.+++.+.+..++++++|.+|+. +.++.|||++
T Consensus        86 ~s~~~a~a~si~~ll~~R~lQG~Ga~~~~v~~~AiirD~~~g~~~ak~~s~~~~~~~~~p~laP~iGg~-l~~~~gWr~~  164 (394)
T PRK11652         86 GTLVALTAHSLTVLIAASAIQGMGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILFSPLLAPLIGGL-LTTLFGWRAC  164 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCHHHH
T ss_conf             999999876799999999982766510000999998863689999999999889999851026169999-9800559999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
Q ss_conf             56788888777788876167886402210111111233310000000002567778876310014688876545543153
Q gi|254780967|r  161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL  240 (398)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (398)
                      |++.++++.+..+..++.+|||.+++++++    +..++++++++||.++.+.++..+.+..++.|.+..|.++++.++.
T Consensus       165 F~~l~~~~~~~~l~~~~~lpET~~~~~~~~----~~~~~y~~ll~~~~f~~~~l~~~~~~~~~~~f~~~~p~v~~~~~gl  240 (394)
T PRK11652        165 YLFLLVFGAGVTFSMARWMPETLPKDARRT----RVLASYKTLLGNRRFNCYLLMLIATLAGIAVFEACAGVLMGAVLGL  240 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCH----HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999996888899645630----1899999998675799999999999999999999649999998279


Q ss_pred             CC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             11-01588998865767788999998500156512468877888999999998732577764037998998999999999
Q gi|254780967|r  241 GN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI  319 (398)
Q Consensus       241 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (398)
                      ++ .+++.+..+..+...++.+.+++.+|+++.  ...+................  ....+.+.......+..++.++.
T Consensus       241 s~~~~g~~f~~~~~~~~~g~~l~~rl~~r~~~~--~~~g~~~~~~~~~~~l~~~~--~~~~~~~~l~~~~~l~~~g~G~~  316 (394)
T PRK11652        241 SSMTVSILFILPIPGYFFGAWFAGRPNKRFSTL--MWQSVICCLLGGLFMWIPGW--FGVMNVWTLLVPAALFFFGAGML  316 (394)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             889999999999999999999999999999999--99999999999999999998--87745999999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             99999999853466769999999999999999999999999831179999999999999999999994220003
Q gi|254780967|r  320 NSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFR  393 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  393 (398)
                      .|+.++.+++++||++|+++++.+++|+.++++.+.+.+.+.+++..++...+..+++.+.++.+.+.|+...+
T Consensus       317 ~p~~~a~al~~~~~~aGtAsal~g~~q~~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~l~~r~~~~  390 (394)
T PRK11652        317 FPLATSGAMEPFPFLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQGSLGLLMTLMGLLILLCWLPLASRMSHQ  390 (394)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             89999999764843030999999999999999999999971369768999999999999999999998634456


No 3  
>PRK11043 inner membrane transport protein YdhC; Provisional
Probab=100.00  E-value=0  Score=418.40  Aligned_cols=384  Identities=18%  Similarity=0.296  Sum_probs=333.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             38999999999988657669999999999819998899999999999999999999999986508289999999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      .++++++.+++++++++|+|+|++|+|++||+.|++++. +++|.|+++++++|+++|+++||+||||+++.|+.++.++
T Consensus         6 ~~l~lLa~l~algplaiDiyLPalP~ia~~f~~~~~~~q-ltls~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~   84 (401)
T PRK11043          6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVS-ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALG   84 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             899999999999999999998429999999696999999-9999999999999999999998827879999999999999


Q ss_pred             HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99851001101110022321001111111000123321000111122122331000111111111122221111110145
Q gi|254780967|r   82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus        82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f  161 (398)
                      ++.|++++|++.++++|++||+|.+...+...++++|.++++|++|.++..+....++++++|.+|+.+ ..+.|||+.|
T Consensus        85 s~~~~~a~~~~~li~~R~lQg~g~~~~~v~~~aiirD~~~~~~~~~~~s~~~~~~~i~p~laP~iGg~l-~~~~gWr~iF  163 (401)
T PRK11043         85 SLGMLWVESAAMLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAQRIFATIMPLVALSPALAPLLGAWL-LNHFGWQAIF  163 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHH
T ss_conf             999998889999999999987310146788889998417899999999999999999999998899999-7047869999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             67888887777888761678864022101111112333100000000025677788763100146888765455431531
Q gi|254780967|r  162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG  241 (398)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (398)
                      ++.++++++..+..++..||++++++      ++...+++++++||.++.+.+..++.++.+++|++.+|+++++....+
T Consensus       164 ~~l~~~gvll~l~~~~~~~e~~~~~~------~~~~~~y~~lL~~r~F~~~~l~~~~~~~~~fayis~spfil~~~G~s~  237 (401)
T PRK11043        164 ATLFAITLLLILPTLWLKPSKKARNN------SQDGLTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIMEQMGYSP  237 (401)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCC------CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             99999999999999865887788875------423568999980868899999999999999999996699999929999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             10158899886576778899999850015651246887788899999999873257776403799899899999999999
Q gi|254780967|r  242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS  321 (398)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (398)
                      ..+++.+..+.++.++++.+.+++.+|++.++....+.....+...........  .....+.....+++...+.|+..|
T Consensus       238 ~~fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l~~~~l~~~~~~--~~~~~~~l~~~~~l~~~g~G~i~p  315 (401)
T PRK11043        238 AVIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIFLAGLL--SHVSIVPILIPFCVMAAANGAIYP  315 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999988089999999999999999999999987--042499999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             99999985346676999999999999999999999999983117999999999999999999999422000343
Q gi|254780967|r  322 NFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT  395 (398)
Q Consensus       322 ~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  395 (398)
                      +.++.+++++||.+|+|+++.+++|+..+++.+++++.+.+++..++.+.+..+++.+.+++.+.++.+.-+.+
T Consensus       316 n~~a~Al~~f~~~AGtASaL~G~lQ~~~gal~s~lv~~~~~~~~~~m~~~m~~~~~~~~l~~~l~r~~~~~~~~  389 (401)
T PRK11043        316 IVVAQALRPFPQATGKAAGLQNTLQLGLCFLASLLVSALISTPLLTTGSVMLSTVVLVALGYKLQRHAEWGEFT  389 (401)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999973481306099999999999999999999996536983799999999999999999998617750331


No 4  
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812   The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=0  Score=424.02  Aligned_cols=381  Identities=27%  Similarity=0.563  Sum_probs=342.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             38999999999988657669999999999819998899999999999999999999999986508289999999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      .++++|+++..++++++|||+|++|+|++||+.|.+++. .+.|.|+.|+++||+.+||+||||||||+++.|..+++++
T Consensus         5 ~~~~~L~~L~~L~pl~~DMYLPa~p~i~~~L~~~as~vQ-~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~   83 (400)
T TIGR00710         5 AFVLLLGLLSILGPLGIDMYLPAFPEIAKDLSVSASLVQ-LTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALS   83 (400)
T ss_pred             HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             999999898763202112521207898986287866899-9999999999998986523332036723889999999999


Q ss_pred             HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC-CCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCH
Q ss_conf             9985100110111002232100111111100012332100-011112212233100011111111112-22211111101
Q gi|254780967|r   82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYD-GRDMAKVLSIAMMIFMIMPILAPSIGQ-ATVALSGGWIG  159 (398)
Q Consensus        82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~-~~~~~~~~~~~~~~~~~g~~igp~ig~-~l~~~~~gWr~  159 (398)
                      ++.+.+++|.+.+++.|++||++.+...+..+++++|.|+ +||.+|.++.++....+.|.+||.+|| .++..+.+||+
T Consensus        84 Sl~~~~~~ni~~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~~~~P~~aP~~Ggai~~~~~l~Wha  163 (400)
T TIGR00710        84 SLGLALSNNIETLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVLALAPAVAPLIGGAIYVLVFLSWHA  163 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999985199999999999999989999999888502032578999999999999999878888869999998520999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf             45678888877778887616788640221011111123331000000000256777887631001468887654554315
Q gi|254780967|r  160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ  239 (398)
Q Consensus       160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (398)
                      +|++..+.+.+...+.++.+|||+++|++.|.+.+...+++..++|||++|.+.++.++.++++|+|.+..|++++|.++
T Consensus       164 IF~~L~l~~~~l~a~~f~~~pET~~~~~r~P~~~~~~~~~f~~l~k~k~~~gY~L~~ga~~g~~Faf~~~~Pfv~~~~~g  243 (400)
T TIGR00710       164 IFAVLSLIGILLSALIFFLLPETLPKEKRIPLQISTSVETFLLLLKDKEFLGYALIYGASFGGFFAFLSGAPFVYIDIMG  243 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999999855122740103740300139998678876888999999999868789999841788640014


Q ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH---------HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             311-015889988657677889999985001565124688---------7788899999999873257776403799899
Q gi|254780967|r  240 LGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYS---------LLIFFMITGSWLLVQITSNHPIHLLIFIAFF  309 (398)
Q Consensus       240 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
                      .++ .++..+..+.++++.++++.+|+.+|++.+...+.+         +.+..+  ....+..........+...+..+
T Consensus       244 Vsp~~fg~lf~~~~~a~i~g~f~~gr~~~k~~~~~~lr~~~GfifslCGl~~~~~--~a~~l~~~~~~~l~~~~~~i~~~  321 (400)
T TIGR00710       244 VSPSVFGLLFALNIIAMIFGGFLNGRFIKKIGAKSLLRIAVGFIFSLCGLVLFIV--SAVLLVITALLGLGSWLLIIGPM  321 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6567789999999999999999998666543100147899999999999999999--99999999998679999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8999999999999999998534667699999999999999999999999-998311799999999999999999999
Q gi|254780967|r  310 FLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIG-QSFNGTTYPITIGFFGIAVSSFICILI  385 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (398)
                      ...+.+.+.+.++..+.++|++||.+|+|+|+.++++...+++.+.+++ ....+|++|+...+..+++..++....
T Consensus       322 ~~~~~g~~~~~s~a~~~AL~~f~h~aGtA~al~g~l~~~l~a~vg~lvs~~i~~~Ta~p~~~~~~~~av~~vl~~y~  398 (400)
T TIGR00710       322 IFVGIGVSMVSSIAMALALEKFPHVAGTASALLGTLRLVLGAIVGLLVSSLIKINTAWPMVLSCLVLAVISVLAFYY  398 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99997688999999999862158741019999999999999999999997516761489999999999999999973


No 5  
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00  E-value=0  Score=407.29  Aligned_cols=375  Identities=24%  Similarity=0.481  Sum_probs=333.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             98865766999999999981999889999999999999999999999998650828999999999999999851001101
Q gi|254780967|r   13 INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT   92 (398)
Q Consensus        13 ~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~   92 (398)
                      +.++++|+|+|++|+|++|||.|+++++ ++.|.|+++++++++++|+++||+||||+++.+..++.+++++|++++|++
T Consensus         2 l~pl~~d~~lPalp~i~~~~~~s~~~~~-~~~s~~~l~~a~~~l~~G~lsD~~GRr~~~~~~~~~~~i~~~~~~~a~~~~   80 (377)
T PRK11102          2 LMPLAIDMYLPALPVIAADFGVSAGSVQ-MTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTID   80 (377)
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             5228987999869999999794998999-999999999999999999999981888999999999999999999856799


Q ss_pred             HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             11002232100111111100012332100011112212233100011111111112222111111014567888887777
Q gi|254780967|r   93 GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFIT  172 (398)
Q Consensus        93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~  172 (398)
                      .+++.|++||++.+...+...++++|++|+|||+|++++......+++.+||.+|+.+ .++.|||+.|++.++++++..
T Consensus        81 ~l~~~R~lqG~~~~~~~~~~~a~i~d~~~~~~~~~~~~~~~~~~~~~~~~~p~iGg~l-~~~~gWr~~F~~~~~~~~l~~  159 (377)
T PRK11102         81 QLIVMRFLQGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGYL-LVWFSWHSIFWVLALAAILAS  159 (377)
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHH
T ss_conf             9999999986530013058899999707999999987999999997048888877999-813566899999999999999


Q ss_pred             HHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHH
Q ss_conf             8887616788640221011111123331000000000256777887631001468887654554315311-015889988
Q gi|254780967|r  173 LWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVG  251 (398)
Q Consensus       173 ~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  251 (398)
                      ++.++.+||+++++++++.+.+...++++++++||+++...+...+.+..++.|.+..|.++++.++.++ ++++.+..+
T Consensus       160 ~l~~~~lpet~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~f~~~~p~~~~~~~gls~~~~gl~~~~~  239 (377)
T PRK11102        160 ALVFFLIPETLPPENRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEIYGVSPQNFGYYFALN  239 (377)
T ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             99999754457844678877999999999999586899999999999999999998347999998299989999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             65767788999998500156512468877888999999998732577764037998998999999999999999998534
Q gi|254780967|r  252 GFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPF  331 (398)
Q Consensus       252 ~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      .++..+++.+.+++.||+++++....+.................   ....+.......+...+.+...++.++.+.++.
T Consensus       240 ~~~~~~gs~l~grl~~r~g~~~~~~~gl~i~~~~~~~l~~~~~~---~~~~~~~~i~~~l~~~~~g~~~~~~~a~a~~~~  316 (377)
T PRK11102        240 IVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGFWALVVGVAAFVGCISMISSNAMAVILDEF  316 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999588999999999999999999999998---777999999999999999999999999997667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             6676999999999999999999999999983117999999999999999999999422000
Q gi|254780967|r  332 SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMF  392 (398)
Q Consensus       332 ~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (398)
                      ||.+|++++++++.++..+++.+.+++.+.+++.+++...+..+++++.++.++..|.|++
T Consensus       317 p~~aG~Asal~g~~~~~~ga~~~~l~~~~~~~~~~~l~~~~~~~~~la~l~~l~~~R~~~~  377 (377)
T PRK11102        317 PHMAGTASSLAGTLRFGIGAIVGALLSLAPFNSAWPMIWSMAFCSILSILFYLYASRPKKK  377 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             1177999999999999999999999998537987999999999999999999999073579


No 6  
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00  E-value=0  Score=311.41  Aligned_cols=382  Identities=15%  Similarity=0.134  Sum_probs=270.9

Q ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             38999999999---988657669999999999819998899999999999999999999999986508289999999999
Q gi|254780967|r    2 EFVIVIAMLMA---INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIH   78 (398)
Q Consensus         2 ~~i~~l~~~~~---~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~   78 (398)
                      |+.++++++..   +..+....+..++|.|++|||+|++|.+ ++.|.++++++++++++|+++||+||||+++.+..++
T Consensus        12 ~~~~v~~l~~~~~~~d~~D~~~~g~~~p~i~~e~~ls~~~~G-~l~s~~~~g~~ig~~~~G~LaDr~Grr~vl~~~~~~~   90 (406)
T PRK11551         12 RLALTIGLCFAVALLEGLDLQSAGVAAPRMAREFGLDVAQMG-WAFSAGILGLLPGALLGGRLADRIGRKRVLIVSVALF   90 (406)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             099999999999999999999999999999998593998999-9999999999999999999999976299999999999


Q ss_pred             HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999851001101110022321001111111000123321000111122122331000111111111122221111110
Q gi|254780967|r   79 IISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI  158 (398)
Q Consensus        79 ~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr  158 (398)
                      +++++++++++|++++++.|+++|++.+...|...++++|++|++||+++++..+.+..+|..++|.++..+ ..+.|||
T Consensus        91 ~i~~~l~a~a~s~~~l~~~R~l~Gig~g~~~p~~~~~i~e~~p~~~Rg~a~~~~~~g~~~G~~~~~~l~~~l-~~~~gWR  169 (406)
T PRK11551         91 GLFSLATAQAWDFPSLLVARLLTGLGLGGALPNLIALTSEAAGPRLRGTAVSLMYCGVPFGGALASVIGVLA-AGDAEWR  169 (406)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-HHCCCHH
T ss_conf             999999971588999999999997234100117798878747899976676032344430689999999999-6012599


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             145678888877778887616788640221011111123331000000---00025677788763100146888765455
Q gi|254780967|r  159 GIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKH---RASTLYNIANSLTMGAILGFVNSSQQIYV  235 (398)
Q Consensus       159 ~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (398)
                      +.|++.++..++...+..+.+||+++..+.++.+.++ ....++++++   +..+.......+.....+.+.++.|.++.
T Consensus       170 ~~f~i~gi~~~i~~~~~~~~l~es~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~wlP~~l~  248 (406)
T PRK11551        170 HIFYVGGVGPLLLVPLLMRWLPESRAFLQAAGVGAAQ-AGVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLI  248 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC-CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999878980046646533221-235889861227999999999999999999999999999999


Q ss_pred             HHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             431531-1015889988657677889999985001565124688778889999999987325777640379989989999
Q gi|254780967|r  236 GIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASF  314 (398)
Q Consensus       236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (398)
                      +. +.+ .+.+.......++..++.++.+++.||+++|+...........   .........    .........+..++
T Consensus       249 ~~-g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~---~l~~~~~~~----~~~~~~~~~~~~g~  320 (406)
T PRK11551        249 AQ-GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPSRVVLGMYAGILA---SLAALAAAP----GFAGMALAGFAAGL  320 (406)
T ss_pred             HC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH---HHHHHHHHH----HHHHHHHHHHHHHH
T ss_conf             85-99888999999999999999999999999883639999999999999---999999987----79999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             999999999999985346-676999999999999999999999999983117-9999-9999999999999999942200
Q gi|254780967|r  315 QFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPIT-IGFFGIAVSSFICILIVEKNQM  391 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~  391 (398)
                      ......+.......|.+| +.+|++.++.+..+..++.+.+.+.|.+.|.+. +... .....+.+++.++.++..+++.
T Consensus       321 ~~~~~~~~~~~~~~e~~p~~~rgt~~G~~~~~g~lG~~igP~~~G~ll~~~g~~~~~~~~~~~~~~~~~~~~l~l~~~~~  400 (406)
T PRK11551        321 FVVGGQSVLYALAPLFYPTQMRGTGVGAAVAVGRLGSMAGPLAAGQLLALGRSTAGVIGASIPVILVAALAALLLVSRPS  400 (406)
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999999999878598999999999999999999999999999981188999999999999999999999849976


Q ss_pred             HHH
Q ss_conf             034
Q gi|254780967|r  392 FRK  394 (398)
Q Consensus       392 ~r~  394 (398)
                      +.+
T Consensus       401 r~~  403 (406)
T PRK11551        401 RAD  403 (406)
T ss_pred             CCC
T ss_conf             579


No 7  
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00  E-value=0  Score=307.35  Aligned_cols=375  Identities=13%  Similarity=0.167  Sum_probs=277.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999886576699999999998199988999999999999999999999999865082899999999999999985
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      .++..++....+.-+..+.+|+|++|||+|+++.| +.+|.|.+++++++++.|+++||+||||+++.++.++.+++++|
T Consensus         7 ~Lal~~F~~gt~Ef~~~GlLp~ia~~l~vs~~~aG-~lvt~yal~~ai~~p~~~~l~~r~~Rk~~ll~~l~~f~~~~~l~   85 (389)
T PRK10091          7 SLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAG-HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF   85 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999988889799435989978599989999-99999999999999999999823680999999999999999999


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                      ++++|++++++.|+++|++.+...+...+++.|..|++||+++++....+.+++.++||++|+. +.+++|||+.|+..+
T Consensus        86 a~a~~~~~ll~~R~l~G~~~g~~~~~~~~~~~~~~p~~~~g~a~a~v~~g~s~a~v~G~p~g~~-l~~~~gWR~~F~~~~  164 (389)
T PRK10091         86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIDPGKVTAAVAGMVSGMTVANLFGIPLGTY-LSQEFSWRYTFLLIA  164 (389)
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHH
T ss_conf             9868899999999999966579999999999996887789999999999999999999999999-987448899999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCH
Q ss_conf             8887777888761678864022101111112333100000000025677788763100146888765455431531-101
Q gi|254780967|r  166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLF  244 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  244 (398)
                      +++++..+..++.+||.+++++.   +    .++..+.+++|+.+.......+...+.+.+.++.+.++.+..+.+ +..
T Consensus       165 ~l~~~~~~~~~~~lP~~~~~~~~---~----~~~~~~~l~~~~~~~~~~~~~l~~~~~f~~~tyi~p~L~~~~g~s~~~i  237 (389)
T PRK10091        165 VFNIAVLASIWFWVPDIRDEADG---G----LREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSM  237 (389)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCC---C----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             99999999999978999887889---8----5889988368199999999999999999999999999998429997799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             58899886576778899999850015651246887788899999999873257776403799899899999999999999
Q gi|254780967|r  245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS  324 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (398)
                      +..+...+++..+++.+.||+.||++++|.............   ........   ..+......++.+.+.....++.+
T Consensus       238 ~~~l~~~Gig~i~G~~l~Grl~Dr~g~~~~~~~~~~~~~~~l---l~l~~~~~---~~~~~~v~~~l~~~~~~~~~~~~q  311 (389)
T PRK10091        238 TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLAL---LMLFFFGG---MKTTSLIFAFICCAGLFALSAPLQ  311 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999762274159999999999999---99999887---699999999999999999779999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             9998534667699999999999999999999999998311-799-9999999999999999999422000343
Q gi|254780967|r  325 SISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT-TYP-ITIGFFGIAVSSFICILIVEKNQMFRKT  395 (398)
Q Consensus       325 ~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~  395 (398)
                      ....+..|+.++.++++.+...+.+.++++.+-|...+.. .+. ..+.-..+++.++.+.+...|.+++|..
T Consensus       312 ~~~~~~a~~~~~~a~al~~sa~nlGialGs~~GG~~l~~g~g~~~~~~~ga~l~~~al~~~l~~~r~~r~~~~  384 (389)
T PRK10091        312 ILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGLMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAA  384 (389)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9999878897668999999999999999999999999769994038999999999999999999876502311


No 8  
>PRK03545 sugar efflux transporter; Provisional
Probab=100.00  E-value=0  Score=306.66  Aligned_cols=378  Identities=15%  Similarity=0.139  Sum_probs=280.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             38999999999988657669--9999999998199988999999999999999999999999865082899999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGIDII--LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHI   79 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~~~~--~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~   79 (398)
                      .|.-+..+....-.++.+-+  .|.+|+|++|||+|+++.| ++.|.|.+++++++++.|+++||+|||++++.++.++.
T Consensus         7 ~w~~v~~L~~~~F~~~~~e~~~~glLp~ia~dl~vs~~~aG-~lvt~yal~~ai~~p~~~~l~dr~~Rr~~ll~~l~~f~   85 (390)
T PRK03545          7 AWLRVVALALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVG-LMLTIYAWVVALMSLPFMLLTSQVERRKLLLGLFVLFI   85 (390)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             57999999999999998899899717999978299999999-99999999999999999999701684999999999999


Q ss_pred             HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             99998510011011100223210011111110001233210001111221223310001111111111222211111101
Q gi|254780967|r   80 ISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG  159 (398)
Q Consensus        80 i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~  159 (398)
                      ++++++++++|+++++++|+++|++.+...+...+++.|.+|+|||+|+++.+..+..++.++|+.+|+ ++.+++|||.
T Consensus        86 ~~~~l~a~a~s~~~Ll~~R~l~Gi~~a~~~~~a~a~~~~l~p~~~rg~a~g~v~~G~slg~vlG~plg~-~l~~~~gWr~  164 (390)
T PRK03545         86 ASHVLSGLAWSFTVLLISRIGIAFAHAVFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGR-VVGQALGWRT  164 (390)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHH
T ss_conf             999999997639999999999861038888889999999778555778999999999999999764489-9988628089


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf             45678888877778887616788640221011111123331000000000256777887631001468887654554315
Q gi|254780967|r  160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ  239 (398)
Q Consensus       160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (398)
                      +|++.++++++..++.+..+|+.+++++       ...++...++++|+.+.......+...+.+...++.+.+..+..+
T Consensus       165 ~F~~~~vl~~~~~l~~~~~lP~~~~~~~-------~~~~~~~~~l~~~~ll~~~~~~~l~~~~~f~~~~yi~p~l~~~~g  237 (390)
T PRK03545        165 TFLAIGGVALITLLLLIKLLPLLPSENS-------GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQNVAG  237 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCC-------CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999997788877677-------666679999728899999999999999999999999999987059


Q ss_pred             CC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             31-10158899886576778899999850015651246887788899999999873257776403799899899999999
Q gi|254780967|r  240 LG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGL  318 (398)
Q Consensus       240 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (398)
                      .+ ...+......+++..+++.+.+|+.||.+++..... .......   ........   .+.+.......+.+.+...
T Consensus       238 ~s~~~~~~~l~~~Gia~~~g~~~~grl~dr~~~~~~~~~-~~ll~~~---~~~l~~~~---~~~~~~~~~~~l~g~~~~~  310 (390)
T PRK03545        238 LSANFATALLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVC---LLLLLPAA---NSEWHLSVLSIFWGIAIMC  310 (390)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHH---HHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_conf             988899999999999999999999999884210199999-9999999---99999988---7899999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHCCHHHHHH
Q ss_conf             999999999853466769999999999999999999999999831179999-9999999999999999-9422000343
Q gi|254780967|r  319 INSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPIT-IGFFGIAVSSFICILI-VEKNQMFRKT  395 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~r~~  395 (398)
                      ..+..+....+..||.+++++++++...+.+.++++.+.|...++..+... +...++++++++...+ .+|.|.-+.+
T Consensus       311 ~~~~~q~~~~~~ap~~~~~a~al~~s~~~lG~~lG~~lgG~~~~~~G~~~~~~~ga~~~~~al~~~~~~~Rr~r~~~~~  389 (390)
T PRK03545        311 IGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAVLALAALVWAIFIFRRFRAVTLE  389 (390)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             7899999999878896789999999999999999999999999822746899999999999999999999886415678


No 9  
>PRK10504 multidrug efflux system protein MdtE; Provisional
Probab=100.00  E-value=0  Score=302.57  Aligned_cols=379  Identities=17%  Similarity=0.183  Sum_probs=285.2

Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             38999-99999998865766999999999981999889999999999999999999999998650828999999999999
Q gi|254780967|r    2 EFVIV-IAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII   80 (398)
Q Consensus         2 ~~i~~-l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i   80 (398)
                      ||.+. +.+-.++..+..++.++++|+|++|||.|..+.. |+.+.|.+.++...++.|+++|||||||+++.++.++.+
T Consensus         9 rW~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~-Wv~taY~L~~a~~~p~~G~laDrfG~rrvf~~gl~~F~~   87 (471)
T PRK10504          9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMH-MVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTL   87 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             7999999999999999997999999999998698873799-999999999999999999999994877999999999999


Q ss_pred             HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             99985100110111002232100111111100012332100011112212233100011111111112222111111014
Q gi|254780967|r   81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI  160 (398)
Q Consensus        81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~  160 (398)
                      ++++|++++|+++++++|++||+|.+...|.+..++.|.+|++||++++++......+|+.+||.+||.+. ++.+|||.
T Consensus        88 gSllca~A~s~~~Li~~R~lQGiG~a~~~P~~~~ii~~~~p~~~~~~a~g~~~~~~~~g~~lGP~lGG~l~-~~~~Wrwi  166 (471)
T PRK10504         88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQIGPLLGPALGGLLV-EYASWHWI  166 (471)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC-CCHHHHHH
T ss_conf             99999971778999999999852762102303410342377688999999999999999885312100101-10102359


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC---------------------CC---------------------
Q ss_conf             567888887777888761678864022101111112---------------------33---------------------
Q gi|254780967|r  161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAI---------------------LH---------------------  198 (398)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~---------------------~~---------------------  198 (398)
                      |++...++++..+..+..+||..+++++  .+....                     +.                     
T Consensus       167 F~invPi~ii~~~~~~~~~p~~~~~~~~--~D~~G~~l~~~~l~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~  244 (471)
T PRK10504        167 FLINIPVGIIGAIATLMLMPNYTMQTRR--FDLSGFLLLAVGMAVLTLALDGSKGTGLSPLAIAGLVAVGVVALVLYLLH  244 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8760699999999999948876655566--78287999999999999999267777754699999999999999999999


Q ss_pred             --------CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             --------310000000002567778876310014688876545543153110-15889988657677889999985001
Q gi|254780967|r  199 --------SFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKF  269 (398)
Q Consensus       199 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~  269 (398)
                              --.+++|+|.+....+...+............|.++|+..+.+.. .++......++..+.+.+.+++.||+
T Consensus       245 ~~r~~~Pll~l~Lfr~r~f~~~~~~~~~~~~~~~~~~fl~pl~lQ~~~G~Sp~~aGl~llP~~~~~~~~~~~~g~l~~r~  324 (471)
T PRK10504        245 ARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF  324 (471)
T ss_pred             HHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             98189886498993631699999999999999999999999999996598899999999999999999999999998860


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf             565124688778889999999987325777640379989989999999999999999985346-6769999999999999
Q gi|254780967|r  270 GIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTV  348 (398)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~  348 (398)
                      |.|+....+.........  ......  ...+.+......+..+.+.++.+++.+..+++..| |+.|.++++.++.++.
T Consensus       325 G~r~~l~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~G~g~~l~~~~~~~~~~~~vp~~~~g~as~l~~~~rql  400 (471)
T PRK10504        325 GYRRVLVATTLGLALVSL--LFMTVA--LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL  400 (471)
T ss_pred             CCHHHHHHHHHHHHHHHH--HHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH
T ss_conf             835899999999999999--999870--3454999999999999999999999999998639977416499999999999


Q ss_pred             HHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999999999831------------1799999999999999999999942
Q gi|254780967|r  349 ISTILGIIIGQSFNG------------TTYPITIGFFGIAVSSFICILIVEK  388 (398)
Q Consensus       349 ~~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~  388 (398)
                      +++++-.+.+.+.+.            ....+.+.+.+++++..+..+...|
T Consensus       401 g~slGvAv~g~~l~~~~~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~~~~~r  452 (471)
T PRK10504        401 SMSIGVTIAGLLLGLFGSQHVSVDSGATHTVFMYTWLCMAVIIALPALIFAR  452 (471)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999986024567653025778999999999999999999822


No 10 
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00  E-value=0  Score=303.76  Aligned_cols=381  Identities=15%  Similarity=0.125  Sum_probs=277.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             99886576699999999998199988999999999999999999999999865082899999999999999985100110
Q gi|254780967|r   12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF   91 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~   91 (398)
                      .+..+.-..+..+.|.|++|+|+|++|.| ++.|.|+++|+++|++.|.++||+|+|+++.++..++++.++++++++++
T Consensus        33 ~~~y~~R~~~s~~~p~i~~e~glt~~q~G-~i~s~f~~~Yal~q~~~G~L~Dr~g~r~~l~~~~~~~~~~~~~~g~~~~~  111 (434)
T PRK11663         33 ALFYFTRKSFNAAMPEMLADLGLSRSDIG-LLATLFYITYGVSKFVSGIVSDRSNPRYFMGIGLIATGIINILFGFSSSL  111 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             99998605799869999988497998999-99999999999999767999987064499999999999999999974328


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11100223210011111110001233210001111221223310001111111111222211111101456788888777
Q gi|254780967|r   92 TGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI  171 (398)
Q Consensus        92 ~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~  171 (398)
                      +.+.+.|++.|++++...|....++++|+|++||++++++.+.+.++|..++|.+.+.+ ..++|||+.|++.++++++.
T Consensus       112 ~~~~~~r~l~G~~~~~~~p~~~~~i~~Wfp~~eRg~a~gi~~~~~~vG~~l~~~l~~~i-~~~~gWr~~F~~~g~~~~v~  190 (434)
T PRK11663        112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI-ALHYGWRYGMIIAGIIAIVV  190 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHH
T ss_conf             99999999999985601689999999984888899999999999877788889999999-99806299999999999999


Q ss_pred             HHHHHHHCCCCCCHH------H----H-C-CCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             788876167886402------2----1-0-1111112333-----10000000002567778876310014688876545
Q gi|254780967|r  172 TLWYYIRFPETLDPR------D----V-R-PLNLYAILHS-----FSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY  234 (398)
Q Consensus       172 ~~~~~~~~pet~~~~------~----~-~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (398)
                      .++.++.+||++++.      +    . + +.+.+....+     .+.++++|.+|...+...+.....+.+.++.|.++
T Consensus       191 ~~~~~~~~~d~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~WlP~yL  270 (434)
T PRK11663        191 GLFLCWRLRDRPQAMGLPSVGEWRHDALELAQEQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYL  270 (434)
T ss_pred             HHHHHHHCCCCHHHCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             99999832688766499971121023455543302457758999999996488999999999999999999983265888


Q ss_pred             HHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             54315311-01588998865767788999998500156512468877888999999998732577764037998998999
Q gi|254780967|r  235 VGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS  313 (398)
Q Consensus       235 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
                      .+.++.+. +.+...+...++..++.++.|+++||+.+++...................... .. .........++..+
T Consensus       271 ~~~~g~s~~~a~~~~~l~~ig~~iG~l~~G~lSDrl~~~~r~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~l~~~G  348 (434)
T PRK11663        271 SETLGYDLVTANSAVSMFELGGFIGSLVAGWGSDKLFNGNRGPMNLIFAAGIFLSVGSLWLM-PF-ASYVMQAACFFTIG  348 (434)
T ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC-CC-CHHHHHHHHHHHHH
T ss_conf             87608889999999999999999999988899998734773189999999999999999983-63-12999999999999


Q ss_pred             H-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCH
Q ss_conf             9-9999999999999853-4667699999999999999999999999998311799999-99999999999999994220
Q gi|254780967|r  314 F-QFGLINSNFSSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITI-GFFGIAVSSFICILIVEKNQ  390 (398)
Q Consensus       314 ~-~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  390 (398)
                      + ..+. .........|. +++.+|+++++.|..++.++.+.+.++|.+.|...|.... .+..+++++.++++-..|.+
T Consensus       349 ~~~~g~-~~l~~~~~~~~~~~~~~gta~G~~n~~g~lG~~l~~~~~G~i~~~~gw~~~f~~l~~~a~v~~~illp~~~~~  427 (434)
T PRK11663        349 FFVFGP-QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALAGYPLAKVLETWHWTGFFVVISIAAGISALLLLPFLNAQ  427 (434)
T ss_pred             HHHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999989-9999999998368210237989988999999999999999999703858999999999999999999981767


Q ss_pred             HHHHHHC
Q ss_conf             0034306
Q gi|254780967|r  391 MFRKTEL  397 (398)
Q Consensus       391 ~~r~~~~  397 (398)
                      ..||.|.
T Consensus       428 ~p~~~~~  434 (434)
T PRK11663        428 APREAQE  434 (434)
T ss_pred             CCCCCCC
T ss_conf             8764459


No 11 
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00  E-value=0  Score=290.26  Aligned_cols=378  Identities=15%  Similarity=0.097  Sum_probs=261.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             9999999999886576699999999998199988999----999999999999999999999865082899999999999
Q gi|254780967|r    4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYG----QHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHI   79 (398)
Q Consensus         4 i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~----~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~   79 (398)
                      .+++.+...+..++..++.|.+|.+.+|++.++.+..    .+..+.|.+...+.++++|.++||+|||++++.|+..++
T Consensus        14 l~~l~~~~f~~~~g~~~i~P~lP~y~~~lg~~~~~~~~~~~Gli~s~~~l~~~i~sp~~G~lsDr~GRK~ill~gl~~~~   93 (406)
T PRK09874         14 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG   93 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             99999999999999999999999999994998077999999999999999999999999999998064899999999999


Q ss_pred             HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             99998510011011100223210011111110001233210001111221223310001111111111222211111101
Q gi|254780967|r   80 ISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG  159 (398)
Q Consensus        80 i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~  159 (398)
                      ++.+++++++|++++++.|+++|++.+ ..+...++++|..|+|||++++++++.+.++|.++||.+|+.+ .+.+|||.
T Consensus        94 i~~~l~~~a~s~~~ll~~R~l~Gi~~~-~~~~a~a~iad~~p~~~rg~~~g~~~~~~~~G~~~GP~iGg~l-~~~~g~~~  171 (406)
T PRK09874         94 IVMVLMGMAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL-ADHYGLRP  171 (406)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCHHH
T ss_conf             999999873609999999999987055-0888999999846775699999999999998888887679999-99736299


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHH
Q ss_conf             45678888877778887616788640221011-1111233310000000002567778-876310014688876545543
Q gi|254780967|r  160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPL-NLYAILHSFSLIFKHRASTLYNIAN-SLTMGAILGFVNSSQQIYVGI  237 (398)
Q Consensus       160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  237 (398)
                      +|++.+.+.++..++.++.+||+.+++++++. +.++.    ...+++++........ .+.......+....+.+..+.
T Consensus       172 ~F~~~a~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~~  247 (406)
T PRK09874        172 VFFITASVLFLCFLVTLFCIREKFQPVSKKEMLHVREV----VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVREL  247 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH----HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999863645688542111206689----98853536999999999999999999999999999998


Q ss_pred             CCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             15311----01588998865767788999998500156512468877888999999998732577764037998998999
Q gi|254780967|r  238 YQLGN----LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS  313 (398)
Q Consensus       238 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
                      .+...    ..+..++..++...+.....+++.||+++++....+.........   ......    ..+.......+.+
T Consensus       248 ~~~~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~~~~~~~l~---~l~~~~----~~~~l~i~~~l~G  320 (406)
T PRK09874        248 AGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIISVLLLI---PMSFVQ----TPLQLGILRFLLG  320 (406)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH---HHHHHH----HHHHHHHHHHHHH
T ss_conf             365444999999999999999999999999999873839999999999999999---999997----5999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHH
Q ss_conf             999999999999998534-667699999999999999999999999998311799999999999999999-999942200
Q gi|254780967|r  314 FQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFIC-ILIVEKNQM  391 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  391 (398)
                      .+.+...|..++...+.. ++++|++.+..+.....+..+++.+.|.+.+...+..  .+..++.+.++. +......|+
T Consensus       321 ~g~g~~~P~~~~~~~~~~~~~~~G~~~g~~~~~~~lG~~~GPll~G~l~~~~G~~~--~f~i~a~~~l~~~~~~~~~~r~  398 (406)
T PRK09874        321 AADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRA--VFLVTAGVVLFNAIYSWNSLRR  398 (406)
T ss_pred             HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999875888477799999999999999999999999999748599--9999999999999999998843


Q ss_pred             HHHHH
Q ss_conf             03430
Q gi|254780967|r  392 FRKTE  396 (398)
Q Consensus       392 ~r~~~  396 (398)
                      +|..|
T Consensus       399 ~r~~~  403 (406)
T PRK09874        399 RRIPQ  403 (406)
T ss_pred             CCCCC
T ss_conf             43665


No 12 
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00  E-value=0  Score=292.70  Aligned_cols=389  Identities=13%  Similarity=0.149  Sum_probs=271.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
                      .++....++..+.-..+..+.|.|.|| |+|+.|.| ++.|.|+++|+++|++.|.++||+|+|+++..++.++++.+++
T Consensus        32 ~~lfi~y~~~Y~dR~~~sva~p~i~e~-gls~~q~G-~i~S~F~~~Yal~q~~~G~l~Dr~g~r~~l~~gl~~~s~~~~l  109 (452)
T PRK11273         32 LGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLG-FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF  109 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999998115899878999882-99988999-9999999999999861277786057429999999999999999


Q ss_pred             HHCC----CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             5100----110111002232100111111100012332100011112212233100011111111112222111111014
Q gi|254780967|r   85 MVTI----NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI  160 (398)
Q Consensus        85 ~~~a----~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~  160 (398)
                      ++++    +++..+++.|++.|++++..+|....++++|+|++||+++.++.+.+.++|..+.+.+-...+....|||+.
T Consensus       110 ~G~~~~~~~s~~~~~~lr~l~G~~eg~~~p~~~k~i~~WFp~~eRg~a~gi~~~~~~vG~~l~~~l~~~~~~~~~gWr~~  189 (452)
T PRK11273        110 MGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAA  189 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             99998788799999999999886520101899999999779989999999999986789999999999999997469999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCH------HHHC---CC---C-CCC---C-CCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             5678888877778887616788640------2210---11---1-111---2-333100000000025677788763100
Q gi|254780967|r  161 FVCMGVITTFITLWYYIRFPETLDP------RDVR---PL---N-LYA---I-LHSFSLIFKHRASTLYNIANSLTMGAI  223 (398)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~pet~~~------~~~~---~~---~-~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (398)
                      |++.++++++..++.++.++|++++      ++.+   +.   + .++   . ....+.++++|..|...+...+.....
T Consensus       190 F~i~g~~~l~~~v~~~~~~~d~P~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~w~l~l~~~~~~~~~  269 (452)
T PRK11273        190 LYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR  269 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999823782105999667774201111332111223256788999804608999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             1468887654554315311-015889988657677889999985001565124688778889999999987325777640
Q gi|254780967|r  224 LGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHL  302 (398)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (398)
                      +.+.++.|.++++.++.+. ..+.......++..+|.++.|+++||+-++|.......................... ..
T Consensus       270 yg~~~WlP~YL~~~~g~s~~~~~~~~~l~~~~g~~G~l~~G~lSDrl~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~-~~  348 (452)
T PRK11273        270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGN-PT  348 (452)
T ss_pred             HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC-HH
T ss_conf             99715389999862488888887999999999999899899999998736733999999999999999999704566-99


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf             379989989999999999999999985346-6769999999999999999999-99999983117999-99999999999
Q gi|254780967|r  303 LIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILG-IIIGQSFNGTTYPI-TIGFFGIAVSS  379 (398)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~~~~~~~  379 (398)
                      ......+..+.+..+.. ......+.|..| +..|++.++.|..++.+|++.+ .++|.+.|.+.|.. ...+.++++++
T Consensus       349 ~~~~~l~~~Gf~~~g~~-~l~~~~a~d~~p~~~~Gt~~G~~n~~g~lgGai~~~~~~G~l~d~~Gw~~~F~~l~~~~~~a  427 (452)
T PRK11273        349 VDMACMIVIGFLIYGPV-MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILA  427 (452)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             99999999999999999-99999999856773678999998789998999998989999677547789999999999999


Q ss_pred             HHHHHHHHCCHHHHHHHC
Q ss_conf             999999942200034306
Q gi|254780967|r  380 FICILIVEKNQMFRKTEL  397 (398)
Q Consensus       380 ~~~~~~~~~~~~~r~~~~  397 (398)
                      .+++..+...+++|.+|+
T Consensus       428 ~i~l~~~~~~e~r~~~~~  445 (452)
T PRK11273        428 VILLIVVMIGEKRHHEEL  445 (452)
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999997776515888


No 13 
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00  E-value=0  Score=278.30  Aligned_cols=353  Identities=16%  Similarity=0.184  Sum_probs=241.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99988657669999999999819998899999999999999999999999986508289999999999999998510011
Q gi|254780967|r   11 MAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINS   90 (398)
Q Consensus        11 ~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~   90 (398)
                      ..+......++...+|.+++|+++|+.|.+ ++.+..+++..+|.+++|+++||+|||+++..+.+++.++++++++++|
T Consensus        27 ~~~d~yD~~~~~~~~~~i~~~~~ls~~~~~-~~~s~~~~g~~iGa~i~G~laDr~GRk~~l~~sil~~~i~t~l~~~a~~  105 (426)
T PRK12307         27 YVFDGFDFMLIFYIMYLIKADLGLTDMEGA-FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG  105 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999999865599888999-9999999999999999999999755399999999999999999986231


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             01110022321001111111000123321000111122122331000111111111122221111110145678888877
Q gi|254780967|r   91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTF  170 (398)
Q Consensus        91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~  170 (398)
                      ++++.+.|+++|++.|+..+.+.+++.|..|+|+|++..++.+.++.+|.++++.+...+ ...+|||++|++ +.+..+
T Consensus       106 ~~~l~i~R~l~Gig~Gg~~~~a~~~~~E~~p~~~Rg~~~~~~~~g~~~G~~la~~l~~~~-~~~~GWR~~F~i-g~lp~l  183 (426)
T PRK12307        106 VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF-AEAYGWRAAFFV-GLLPVL  183 (426)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHH-HHHHHH
T ss_conf             999999999998013445668999999867412219999999998699999999999998-557784999999-999999


Q ss_pred             HHHHHHHHCCCCCCHHHHCCCCCCC--------CCCCCCCCCCCCHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf             7788876167886402210111111--------2333100000000025677---7887631001468887654554315
Q gi|254780967|r  171 ITLWYYIRFPETLDPRDVRPLNLYA--------ILHSFSLIFKHRASTLYNI---ANSLTMGAILGFVNSSQQIYVGIYQ  239 (398)
Q Consensus       171 ~~~~~~~~~pet~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  239 (398)
                      ..++....+||+++.++.+..+.++        .....+++++++.......   .....++..+....+.|.++.+...
T Consensus       184 l~~~~r~~lpESp~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~g~  263 (426)
T PRK12307        184 LVIYIRARAPESKEWEEAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGF  263 (426)
T ss_pred             HHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999982899877898664442322330266643569999887699999999999999999999999999999998699


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             31101588998865767788999998500156512468877888999999998732577764037998998999999999
Q gi|254780967|r  240 LGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI  319 (398)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (398)
                      .............++..++.++.+++.||+|+|+....+.....+.......  .. ... ........+.......+ .
T Consensus       264 ~~~~~~~~~~~~~~~~~~g~~~~g~l~DriGRr~~~~~~~i~~~i~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~g-~  338 (426)
T PRK12307        264 DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR--IP-QDN-YLLLGACLFGLMATNVG-V  338 (426)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH--HH-HHH-HHHHHHHHHHHHHHHHH-H
T ss_conf             8999999999999999999999999999987699999999999999999999--97-138-99999999999999999-9


Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999985346-676999999999999999999999999983117999999
Q gi|254780967|r  320 NSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIG  371 (398)
Q Consensus       320 ~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  371 (398)
                      .+....+..|.+| +.|+++.++.+.++..++...|.+.+++.+.+..+....
T Consensus       339 ~~~~~~~~~ElfPt~vR~tg~G~~~~~grigg~~~P~i~~~L~~~~G~~~a~~  391 (426)
T PRK12307        339 GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT  391 (426)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             99999999984989899999999999999999999999999998879458999


No 14 
>TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638   This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=0  Score=278.69  Aligned_cols=354  Identities=19%  Similarity=0.248  Sum_probs=287.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
                      +.+..-+.+.-+..++...++|.++.||+.|..++. |+.|.|+++.++.-|..|+++||+|.||+++++.+.+.+++++
T Consensus         5 ~~l~~g~FMa~LD~Tiv~va~p~~~~~lg~s~~~~~-Wv~TsY~~A~a~~IPl~gwLa~R~G~r~lFl~~~~~Ft~~S~~   83 (501)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTLAGDLGASLSQVQ-WVITSYMLANAIVIPLTGWLAKRFGTRKLFLISTLAFTLGSLL   83 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999877632114410023-2314678889999988999998708447899999999999999


Q ss_pred             HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             51001101110022321001111111000123321000111122122331000111111111122221111110145678
Q gi|254780967|r   85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM  164 (398)
Q Consensus        85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~  164 (398)
                      |+.|+|++.++++|.+||+++|...|.+++++...|||+||++++++++....++|++||.+||++ .+.++|||+|++.
T Consensus        84 Cg~A~nl~~lIifR~~QG~~gG~l~Pl~~~~l~~~~PP~~Rg~~~~~~Gl~v~~AP~~GP~LGGwI-~e~~~Wrw~F~~N  162 (501)
T TIGR00711        84 CGVANNLELLIIFRVIQGFGGGLLIPLSFSLLLNIYPPEKRGLAMAIWGLTVLVAPALGPTLGGWI-IENYEWRWIFYIN  162 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHH-HHCCCCHHEEEHH
T ss_conf             998520899999999988622048999999999747912158356421066874202353104688-7326222202125


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHH-HHCCCCC----------------------CCCCCC----------------------
Q ss_conf             8888777788876167886402-2101111----------------------112333----------------------
Q gi|254780967|r  165 GVITTFITLWYYIRFPETLDPR-DVRPLNL----------------------YAILHS----------------------  199 (398)
Q Consensus       165 ~~~~~~~~~~~~~~~pet~~~~-~~~~~~~----------------------~~~~~~----------------------  199 (398)
                      -.+++...+..++.+||+++++ ++++.+.                      +....+                      
T Consensus       163 vPiG~~v~~~a~~~l~~d~~~~~~~~~~D~~G~~L~~~g~~~Ll~~ls~g~~~GW~~~~~il~~~i~~~~~~~~fv~~se  242 (501)
T TIGR00711       163 VPIGIIVVVVALFILPEDREKEKASKNLDFLGLLLLSVGLGSLLYVLSEGQEEGWFDSNLILILSIVGLVAIIAFVVRSE  242 (501)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             78999999999998446666616663112788999999999999875215668899863156999999999999999787


Q ss_pred             --------CCCCCCCCHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHH-HHHC
Q ss_conf             --------1000000000256-777887631001468887654554315311-0158899886576778899999-8500
Q gi|254780967|r  200 --------FSLIFKHRASTLY-NIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSR-LVEK  268 (398)
Q Consensus       200 --------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-l~~r  268 (398)
                              -.+++|+|.+-.- .++.......+++-....|.++++..+.+. +.|......++...+.+++.|+ +.||
T Consensus       243 l~~~nP~~D~~~F~~~~Ft~~f~~~~~~~~~~lyg~~~LLP~~Lq~~~~~~~~~~Gl~~~P~gl~~~l~sPIaG~~~~~k  322 (501)
T TIGR00711       243 LTDDNPLVDLRLFKYRNFTIGFCVYSLLLGLGLYGAVYLLPLYLQQVLGYTALQAGLHILPVGLAPLLSSPIAGRMLGDK  322 (501)
T ss_pred             HCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             41468800443402025788999999999999999999999999986279978999999889999999707999998414


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q ss_conf             1565124688778889999999987325777640379989-989999999999999999985346-67699999999999
Q gi|254780967|r  269 FGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFIN  346 (398)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~  346 (398)
                      .+.|+....+.........   .................- ..+.|++.++.+-+.+..+++..| |+.+.++++.+..+
T Consensus       323 ~~~R~l~~ig~~~~a~~~y---~~~~~~~~~~~f~~~~~~G~~i~G~g~~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~R  399 (501)
T TIGR00711       323 IDPRLLVTIGLILYAVGFY---LRAFTLTPDTDFLAIALPGQFIRGFGMGCFFMPLTTIALSKLPAEKVARGSSLSNFLR  399 (501)
T ss_pred             CCHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             6806899999999999998---8852215578618888677999999999999875577761252357622689999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999831
Q gi|254780967|r  347 TVISTILGIIIGQSFNG  363 (398)
Q Consensus       347 ~~~~~~~~~~~g~~~~~  363 (398)
                      +++|+++..+....+.+
T Consensus       400 ~~gGSiGTal~t~~~~n  416 (501)
T TIGR00711       400 QLGGSIGTALITTILTN  416 (501)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             98889999999999986


No 15 
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00  E-value=0  Score=271.78  Aligned_cols=358  Identities=15%  Similarity=0.178  Sum_probs=243.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
                      +...+..++..+...++..++|.+++|+|+|+.|.+ ++.|..++++.++++++|+++||+|||++++++..++.+++++
T Consensus        16 ~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g-~~~s~~~~g~~iGa~~~G~laDr~GRr~~~~~~~~~~~~~~~~   94 (486)
T PRK03893         16 SAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAA-SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSAGTLA   94 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999988597988999-9999999999999999999999845699999999999999999


Q ss_pred             HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             51001101110022321001111111000123321000111122122331000111111111122221111110145678
Q gi|254780967|r   85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM  164 (398)
Q Consensus        85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~  164 (398)
                      +++++|++++++.|+++|+|.|...+...++++|..|+++|++..++.+.++.+|.++++.++..++. .+|||+.|++ 
T Consensus        95 ~a~a~~~~~l~~~R~l~G~g~Gg~~~~~~~~~~E~~P~~~Rg~~~~~~~~g~~~G~~la~~~~~~~~~-~~gWR~~f~i-  172 (486)
T PRK03893         95 CGFAPGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVLAAQVYSLVVP-VWGWRALFFI-  172 (486)
T ss_pred             HHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHH-
T ss_conf             99828899999999997422612024899999987756047999999999999999999999999811-5356999999-


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHCCCC--CCCC--------CCC------------CCCCCC-----C-----------
Q ss_conf             8888777788876167886402210111--1112--------333------------100000-----0-----------
Q gi|254780967|r  165 GVITTFITLWYYIRFPETLDPRDVRPLN--LYAI--------LHS------------FSLIFK-----H-----------  206 (398)
Q Consensus       165 ~~~~~~~~~~~~~~~pet~~~~~~~~~~--~~~~--------~~~------------~~~~~~-----~-----------  206 (398)
                      +.+..+..++....+||+++-..++..+  .++.        .+.            ....+.     .           
T Consensus       173 G~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (486)
T PRK03893        173 GILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQNAAIVAVLGLLCA  252 (486)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             99999999999980999878998765231577899998513442102455320003566652022342046888999888


Q ss_pred             -----------CHHHHHHHHHHHHHHC--C--HHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             -----------0002567778876310--0--14688876545543153110-158899886576778899999850015
Q gi|254780967|r  207 -----------RASTLYNIANSLTMGA--I--LGFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFG  270 (398)
Q Consensus       207 -----------~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~  270 (398)
                                 ++.|...+........  .  +....+.|.++.+..+.+.. .........++..++..+.+++.||+|
T Consensus       253 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~fl~~w~~~~~lPt~L~~~~g~~~~~~~~~~~~~~lg~~vG~l~~g~L~DriG  332 (486)
T PRK03893        253 AIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLG  332 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999998731357899999999999999999889999999999751888889999999999999999999999998948


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             65124688778889999999987325777640379989989999999999999999985346-67699999999999999
Q gi|254780967|r  271 IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVI  349 (398)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~  349 (398)
                      +||................  ...   ...+........++.++...........+..|.+| +.|+++.+....++.++
T Consensus       333 rr~~~~~~~l~~~~~~~~l--~~~---~~~~~~~l~~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vGRlG  407 (486)
T PRK03893        333 TRKAYVCSLLISQLLIIPV--FAI---GGANVWVLGLLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVGALG  407 (486)
T ss_pred             CHHHHHHHHHHHHHHHHHH--HHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             5899999999999999999--997---56469999999999999999999999999887488969889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999998311799999
Q gi|254780967|r  350 STILGIIIGQSFNGTTYPITI  370 (398)
Q Consensus       350 ~~~~~~~~g~~~~~~~~~~~~  370 (398)
                      +.+.|.+.|.+.++...+...
T Consensus       408 ~ii~P~i~g~L~~~~~lg~~~  428 (486)
T PRK03893        408 GALAPILGALIAQRLGLGTAL  428 (486)
T ss_pred             HHHHHHHHHHHHHCCCCHHHH
T ss_conf             999999999998708951899


No 16 
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00  E-value=0  Score=270.53  Aligned_cols=378  Identities=12%  Similarity=0.072  Sum_probs=275.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             9999999988657669999999-999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
                      ++..-+.+..++..+..|.+|. +.+++|.|..++| ++.+.+.+...+.++++|.++||+|||++++.|+.+.+++.+.
T Consensus        14 ~L~~~~~l~~lG~~mv~Pfl~iyl~~~lg~s~~~iG-lil~~~~l~~~~~~~~~G~LsDR~GrK~vii~gl~~~a~~~~~   92 (400)
T PRK11646         14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVG-IALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT   92 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999860799889999-9999999999999861468888618819999999999999999


Q ss_pred             HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             51001101110022321001111111000123321000111122122331000111111111122221111110145678
Q gi|254780967|r   85 MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM  164 (398)
Q Consensus        85 ~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~  164 (398)
                      +++++|+|.++++|+++|++.+...|+..++++|..|+|||.|++++.+.+.++|.++||.+|+.+..  .+++.+|+..
T Consensus        93 ~a~a~s~~~l~~~~~l~G~g~~~~~pa~~Aliad~t~~~~R~~~f~l~~~a~niG~~iGpllGg~l~~--~~~~~~f~~~  170 (400)
T PRK11646         93 MGIAHEPWLLWFSCILSGLGGTLFDPPRSALVIKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--YDFRLVCATG  170 (400)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_conf             99973599999999999998564679999999970887689999999999999999999999999998--6489999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf             88887777888761678864022101111112333100000000025677788763100146888765455431531101
Q gi|254780967|r  165 GVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF  244 (398)
Q Consensus       165 ~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (398)
                      +.+.++..+...+..||.+.++++     .+..++++++++||++..+.+.....+..........|....+..+.....
T Consensus       171 a~~~~l~~~~~~~~~p~~~~~~~~-----~~~~~~~~~vl~dr~f~~~~l~~~~~~~~~~q~~~~lpl~~~~~~~~~~~~  245 (400)
T PRK11646        171 AVLFVLAAAFNAWLLPAYKLSTVR-----TPVREGMTRVLRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDIAGSPSAV  245 (400)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCC-----CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             999999999999957866666667-----636778999972688999999999999999999999999999855878999


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             58899886576778899-99985001565124688778889999999987325777640379989989999999999999
Q gi|254780967|r  245 PIAFAVGGFAMSIASFI-NSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF  323 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~-~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (398)
                      +..+..+++........ ..+..+|++.++....+........   .......    +...+.....+...+..+..|..
T Consensus       246 g~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~---~~~~~~~----~~~~~~i~~~lftiGe~l~~P~~  318 (400)
T PRK11646        246 KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM---FPIGMVS----NLQQLFTLICLFYIGSIIAEPAR  318 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH---HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999985472999999999999999---9999998----89999999999999999997548


Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             999985346-67699999999999999999999999998311------79999999999999999999994220003430
Q gi|254780967|r  324 SSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGT------TYPITIGFFGIAVSSFICILIVEKNQMFRKTE  396 (398)
Q Consensus       324 ~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  396 (398)
                      ++...+..| |.+|+..++++.....+..+++.+.|+++|..      ..++......+.+......+...|+|..||--
T Consensus       319 ~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~~~~p~~~W~~~~~~~~l~~~~l~~~~~~~~~~~~~~  398 (400)
T PRK11646        319 ETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALHQPELPWMMLGIIGIITLLALGWQFSQKRIARRML  398 (400)
T ss_pred             HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999838965432376299999999999889899999955302489857999999999999999999998999986551


Q ss_pred             CC
Q ss_conf             69
Q gi|254780967|r  397 LR  398 (398)
Q Consensus       397 ~r  398 (398)
                      .|
T Consensus       399 ~~  400 (400)
T PRK11646        399 ER  400 (400)
T ss_pred             CC
T ss_conf             39


No 17 
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00  E-value=1.4e-45  Score=267.27  Aligned_cols=350  Identities=19%  Similarity=0.209  Sum_probs=253.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             9999999998865766999999999-981999889999999999999999999999998650828999999999999999
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKIS-DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF   83 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~-~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~   83 (398)
                      +.+.+.+++..++..+..|.+|.+. |++|.|+.++| ++.+.|.++..+.++++|+++||+||||+++.|+.++.++.+
T Consensus        20 ~~i~~~~Fl~~l~~g~~~PvlP~y~~~~lg~s~~~iG-li~~~f~l~~~i~~p~~G~lsDr~GRk~vll~gl~~~~l~~~   98 (395)
T PRK05122         20 VSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAVVAG-LVISLQYFATLLSRPHAGRLADTLGPKKAVVFGLCGCFLSGL   98 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             9999999999999986999899999974799698999-999999999999999899999834862989999999999999


Q ss_pred             HHHCCC--------CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
Q ss_conf             851001--------101110022321001111111000123321000111122122331000111111111122221111
Q gi|254780967|r   84 IMVTIN--------SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG  155 (398)
Q Consensus        84 ~~~~a~--------~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~  155 (398)
                      .+.+++        +++.+++.|+++|++.+...+...+++.|..|++||++.+++.+.+..+|..+||.+|+. +.+..
T Consensus        99 ~~~~a~~~~~~~~~~l~~L~~~R~l~Gi~~a~~~~a~~a~~~~~~p~~rrg~~mg~~g~~~~lg~~iGP~iG~~-l~~~~  177 (395)
T PRK05122         99 LYLLAGLLAAWPVLSLLLLLAGRLLLGIGESLAGTGSILWGIGRVGSEHTGRVISWNGIATYGALAIGAPLGVL-LYHWG  177 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf             99999875200377999999999998989999999999999861689889999999999999999999999999-99972


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             11014567888887777888761678864022101111112333100000000025677788763100146888765455
Q gi|254780967|r  156 GWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYV  235 (398)
Q Consensus       156 gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (398)
                      +|+..|+..+.+.++..+... ..||.+++++ ++.+       +++..++  .+.......+....+.......+.+..
T Consensus       178 g~~~~f~~~~~l~~~~~~~~~-~~~~~~~~~~-~~~~-------~~~~~~~--~~~~~~~~~l~~~~~~~i~~f~~ly~~  246 (395)
T PRK05122        178 GLAALGLLIMLLALLGLLLAR-PRPPVPPVKG-ERLP-------FRRVLGR--VWPYGMGLALASIGFGTIATFITLYYA  246 (395)
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCC-CCCC-------HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             699999999999999999971-2789987677-7887-------8999998--899999999999999999999999998


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             43153110158899886576778899999850015651246887788899999999873257776403799899899999
Q gi|254780967|r  236 GIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQ  315 (398)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (398)
                      +. +.++ .+..+...+.+..+..+..+++.||+++++....+..+.....   .......    +.+.......+.+.+
T Consensus       247 ~~-g~~~-~~~~~~~~~~~~~~~r~~~g~l~dr~g~~~~i~~~~~l~~~~l---~ll~~~~----~~~~ll~a~~l~G~G  317 (395)
T PRK05122        247 AR-GWDG-AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLAVEILGL---LLLWLAP----SPWVALIGAALTGFG  317 (395)
T ss_pred             HC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHH----HHHHHHHHHHHHHHH
T ss_conf             82-7313-6999999999999999983278786064489999999999999---9999872----099999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999985346-67699999999999999999999999998311799999999999
Q gi|254780967|r  316 FGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIA  376 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  376 (398)
                      .+...|..++...+..| +++|.+++.++.....+..+++.+.|.+.|...+.....+.+..
T Consensus       318 ~g~~~P~l~a~~~~~~p~~~rG~a~g~~~~~~dlG~~iG~~l~G~la~~~G~~~~f~~~a~~  379 (395)
T PRK05122        318 FSLVFPALGVEAVKRVPPQNRGAALGAYSVFFDLSLGITGPLAGLVASWFGYPSIFLFAALA  379 (395)
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             98888999999986498724579999999999999999999999999973836899999999


No 18 
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00  E-value=1.4e-45  Score=267.77  Aligned_cols=339  Identities=18%  Similarity=0.258  Sum_probs=259.8

Q ss_pred             HHHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             657669--999999999819998899999999999999999999999986508289999999999999998510011011
Q gi|254780967|r   16 LGIDII--LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTG   93 (398)
Q Consensus        16 ~~~~~~--~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~   93 (398)
                      ++++-+  .+.+|+|++|||+|.++.|+ .+|.|.++++++.++...+.||+.||++++....++.++++++++++||+.
T Consensus        25 igttEfv~~gLLp~iA~dl~vs~~~aG~-lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~  103 (394)
T COG2814          25 IGTTEFVPVGLLPPIAADLGVSEGAAGQ-LITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAV  103 (394)
T ss_pred             HHHHHHHHHHCHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf             8847886882228899883998889999-999999999998899999871335389999999999999899999531999


Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             10022321001111111000123321000111122122331000111111111122221111110145678888877778
Q gi|254780967|r   94 MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITL  173 (398)
Q Consensus        94 l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~  173 (398)
                      +.++|++.|+..|..++...++..|..||+||+|+++....+.+++.++|.++|. ++.+.+|||+.|+..+.++++..+
T Consensus       104 Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt-~ig~~~GWR~~F~~ia~l~ll~~~  182 (394)
T COG2814         104 LLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGT-FLGQLFGWRATFLAIAVLALLALL  182 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999998889999999999998759521245999999779999998512899-999886389999999999999999


Q ss_pred             HHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHH
Q ss_conf             887616788640221011111123331000000000256777887631001468887654554315311-0158899886
Q gi|254780967|r  174 WYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVGG  252 (398)
Q Consensus       174 ~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  252 (398)
                      ..+..+|   |+  +.+.+.+...++..+++|+|+.+...+...+.+.+.|...++...++++..+.+. ..++....++
T Consensus       183 ~~~~~lP---~~--~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~G  257 (394)
T COG2814         183 LLWKLLP---PS--EISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFG  257 (394)
T ss_pred             HHHHHCC---CC--CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             9999699---96--677877764467998966845899999999998162444895799998735998768899999998


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             57677889999985001565124688778889999999987325777640379989989999999999999999985346
Q gi|254780967|r  253 FAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS  332 (398)
Q Consensus       253 ~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      ++..+|+.+.||+.|| +.++...........   ..........+   ........++.++..............+..|
T Consensus       258 v~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~---~~l~l~~~~~~---~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p  330 (394)
T COG2814         258 IAGFIGNLLGGRLADR-GPRRALIAALLLLAL---ALLALTFTGAS---PALALALLFLWGFAFSPALQGLQTRLARLAP  330 (394)
T ss_pred             HHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHH---HHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9999987777640202-106699999999999---99999983111---9999999999999863015678887502477


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             676999999999999999999999999983117999
Q gi|254780967|r  333 HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPI  368 (398)
Q Consensus       333 ~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~  368 (398)
                      |.++.+++++....+.+-+.+..+-|...|+..+..
T Consensus       331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~  366 (394)
T COG2814         331 DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAA  366 (394)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_conf             743799999999999999999999899998103577


No 19 
>TIGR00895 2A0115 MFS transporter, aromatic acid:H+ symporter (AAHS) family; InterPro: IPR004746 Benzoate transport proteins belong to this group. Benzyl alcohol, benzaldehyde, benzoate, and anthranilate are metabolized via catechol, cis,cis-muconate, and the beta-ketoadipate pathway in some bacteria.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=1.4e-45  Score=268.73  Aligned_cols=349  Identities=19%  Similarity=0.250  Sum_probs=252.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHH
Q ss_conf             999999999988657669999999999819998899999999999999999999999986508-----289999999999
Q gi|254780967|r    4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-----RKIVMMFGLVIH   78 (398)
Q Consensus         4 i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-----rr~~l~~g~~~~   78 (398)
                      +++..+.+.+.-+..-++-=+.|.|.+|+++++.|.| .+.|.-++|+.+|.++.|+++||||     |||+++.+.+++
T Consensus        19 ~~~~~l~~l~DG~Dl~~~gf~ap~l~~~w~l~~~~~G-~l~S~gL~G~~~Gal~~G~~aDr~GhlGvsR~r~l~~~~llF   97 (413)
T TIGR00895        19 IILSFLIMLVDGLDLAALGFAAPALSAEWGLDPVQLG-FLLSAGLIGMAFGALFFGPLADRIGHLGVSRKRVLLWSILLF   97 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf             9999999996259999999997688888588914100-789999999998799998787865035413999999999999


Q ss_pred             HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999851001101110022321001111111000123321000111122122331000111111111122221111110
Q gi|254780967|r   79 IISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI  158 (398)
Q Consensus        79 ~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr  158 (398)
                      .+++.+|++|+|+++|.+.|++.|+|-|+..|...++.+|..|+|.|+++.+.+..++.+|...|..+++.++. .+|||
T Consensus        98 ~~ft~~~a~A~~~~qL~~~R~~AGlGlGg~~pn~~aL~sEY~p~r~R~~~vg~~~~Gy~~G~~~gg~l~~~LiP-~~GWr  176 (413)
T TIGR00895        98 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLIALVSEYAPKRFRGTAVGLMFCGYAIGAAVGGFLAGWLIP-AFGWR  176 (413)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf             99999988740479999999998554999999999999843576334668888887678999999999888754-44079


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCH--------HH-------------HCC-----------CCCCCCCCCCCC-CCC
Q ss_conf             145678888877778887616788640--------22-------------101-----------111112333100-000
Q gi|254780967|r  159 GIFVCMGVITTFITLWYYIRFPETLDP--------RD-------------VRP-----------LNLYAILHSFSL-IFK  205 (398)
Q Consensus       159 ~~f~~~~~~~~~~~~~~~~~~pet~~~--------~~-------------~~~-----------~~~~~~~~~~~~-~~~  205 (398)
                      ..|++.++++++...+....+||+.+-        ++             +++           .+.++..++.++ +++
T Consensus       177 ~~F~vGG~~Pl~ll~~l~~~LPES~~fl~~kg~~~~~~~~~~n~I~p~~~~~~~~Rfvl~~~~~~~~~~~~~~~~~~lF~  256 (413)
T TIGR00895       177 SLFYVGGIIPLLLLLLLMRFLPESIDFLVEKGKRPEKVRRIVNAIAPQLQAEAQSRFVLALPEQKSAQKTKRSVVKLLFQ  256 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             99999999999999999977687689897708875799999877545422576542577633541001357899998733


Q ss_pred             CC---HHHHHHHHHH-HHHHCCHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             00---0025677788-76310014688876-5455431531101588998865767788999998500156512468877
Q gi|254780967|r  206 HR---ASTLYNIANS-LTMGAILGFVNSSQ-QIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLL  280 (398)
Q Consensus       206 ~~---~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~  280 (398)
                      ++   ....+.+.+. +....+|...+|.| .+..|.....+...........++++++++.+++.||+++|+......+
T Consensus       257 ~~~~~~T~~LW~~y~G~~~~~~Y~l~~WlP~~L~~~~G~~~~~~~~~~~~~~~Gg~~G~~~~g~l~Drl~~~~~~~~~~l  336 (413)
T TIGR00895       257 GKTAKITVLLWLLYFGMLLVGVYFLTNWLPSKLMVELGFSLSKAAIVGALFNFGGVIGSIIFGWLADRLGPRFVTALLLL  336 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             46875779999999999999999999611345665348677789999999999899999999999999376199999999


Q ss_pred             HHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             888999999998732-5777640379989989999999999999999985346-67699999999999999999999999
Q gi|254780967|r  281 IFFMITGSWLLVQIT-SNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIG  358 (398)
Q Consensus       281 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g  358 (398)
                      ...+    +...... ..+....  .....++.|+...-......++..+.+| +.|+|+.+....++..++.++|.+.|
T Consensus       337 ~~av----f~~~~~~~~~~~~~~--~l~~~~~~G~~~~G~~~~~~a~m~~~Yp~~~RaTGvGw~~giGR~Ga~~gP~~~G  410 (413)
T TIGR00895       337 LGAV----FAVLVGSSTLFSPTL--LLLLGAIAGLFVNGGQSGLYALMAEFYPTAIRATGVGWAIGIGRLGAIIGPILAG  410 (413)
T ss_pred             HHHH----HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999----999999864102999--9999999999988588989875251040102146788888756899989999998


Q ss_pred             HH
Q ss_conf             99
Q gi|254780967|r  359 QS  360 (398)
Q Consensus       359 ~~  360 (398)
                      .+
T Consensus       411 ~L  412 (413)
T TIGR00895       411 VL  412 (413)
T ss_pred             HH
T ss_conf             82


No 20 
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00  E-value=3.8e-44  Score=259.87  Aligned_cols=350  Identities=16%  Similarity=0.209  Sum_probs=263.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             899999999998865766999--999999981999889999999999999999999999998650828999999999999
Q gi|254780967|r    3 FVIVIAMLMAINSLGIDIILP--CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII   80 (398)
Q Consensus         3 ~i~~l~~~~~~~~~~~~~~~p--~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i   80 (398)
                      |.-+..+..+...+.++-+.|  .+|+|++|||+|.++.|+ .+|.|.++++++.|+...+.||++||++++..+.++.+
T Consensus        19 W~av~~La~~~F~~~ttEf~~~GlLp~iA~dl~Vs~~~aG~-lVT~yAl~~ai~aP~l~~lt~r~~Rr~lLl~~l~~f~~   97 (394)
T PRK10213         19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ-SVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL   97 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             69999999999999989999997439899677999789999-99999999999889999986678838999999999999


Q ss_pred             HHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             99985100110111002232100111111100012332100011112212233100011111111112222111111014
Q gi|254780967|r   81 STFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI  160 (398)
Q Consensus        81 ~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~  160 (398)
                      +++++++++||+++++.|++.|++.+..++...++..|..|+|+|+|++++...+.+++.++|.++|. ++.+.+|||..
T Consensus        98 ~n~l~Ala~~f~~Ll~~R~l~g~~~g~f~~~a~~~a~~lvp~~~~grAiaiv~~G~s~A~v~GvPlgt-~ig~~~GWR~~  176 (394)
T PRK10213         98 SCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGS-FLGELIGWRNV  176 (394)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHH
T ss_conf             99999994879999999999982547899999999999769302236999998899999998210898-88600139999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
Q ss_conf             56788888777788876167886402210111111233310000000002567778876310014688876545543153
Q gi|254780967|r  161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL  240 (398)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (398)
                      |+..+.++.+..+..+..+|+.+++++.       ..++..+.+|+|+.+.......+...+.|..+++...++.+..+.
T Consensus       177 F~~ia~l~~i~~~~~~~~lP~~~~~~~~-------~~~~~~~~l~~~~v~~~l~~~~l~~~g~f~~yTYi~p~l~~~~g~  249 (394)
T PRK10213        177 FNAAAVMGVLCIFWIIKSLPSLPGEPSH-------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGF  249 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCC-------CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999837778888875-------657899995678999999999999999999899679999984189


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             1-101588998865767788999998500156512468877888999999998732577764037998998999999999
Q gi|254780967|r  241 G-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI  319 (398)
Q Consensus       241 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (398)
                      + ...+......+++..+|+.+.|++.||..++... .......   ...........   ..+.......+.+..++..
T Consensus       250 ~~~~is~~L~~fGi~~~~Gn~l~G~l~dr~~~~~l~-~~~~~l~---~~~~~l~~~~~---~~~~~~~~~~lwG~~~~~~  322 (394)
T PRK10213        250 GVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALA-GAPLVLA---LSALVLTLWGS---DKIVATGVAIIWGLTFALV  322 (394)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_conf             864899999999999999999999996310878999-9999999---99999999874---5999999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999985346676999999999999999999999999983117999
Q gi|254780967|r  320 NSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPI  368 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~  368 (398)
                      .+..+....+..||.+..+++++....+.+-++++.+-|...|+.....
T Consensus       323 ~~~~q~~i~~~a~~a~~~a~al~~safnlgia~Ga~iGG~~l~~~G~~~  371 (394)
T PRK10213        323 PVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTS  371 (394)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             9999999998786867699999999999999999999999997657137


No 21 
>PRK03699 hypothetical protein; Provisional
Probab=100.00  E-value=7.6e-44  Score=258.24  Aligned_cols=350  Identities=12%  Similarity=0.120  Sum_probs=264.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             89999999999886576699999999998199988999999999999999999999999865082899999999999999
Q gi|254780967|r    3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST   82 (398)
Q Consensus         3 ~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~   82 (398)
                      +.++.....++..+-.+..-+.+|++++|||+|.++.+ .+.+...+|+.+++++.|++.||+||||++..+..+..++.
T Consensus         8 l~~~~fl~ff~~G~~~~~~G~~iP~i~~~f~ls~~~~g-~i~s~~~iG~li~~~~~g~L~~k~G~k~~l~~g~~l~~i~~   86 (394)
T PRK03699          8 LTWISFLSYALTAALVIVTGMVMGPIAEYFNLPVSSMS-NTFTFLNAGILISIFLNAWLMEIIPLKRQLRFGFILMVLAV   86 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             99999999999998998699858999999495999999-99999999999999999999999595099999999999999


Q ss_pred             HHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             98510011011100223210011111110001233210001111221223310001111111111222211111101456
Q gi|254780967|r   83 FIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFV  162 (398)
Q Consensus        83 ~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~  162 (398)
                      +..+++||++.+.+.|++.|++.|...+...+++.|.+++|+|++.+...+..+++|..++|.+.+.++....+||+.|+
T Consensus        87 l~~~~~~s~~~l~v~~fl~Glg~G~~~~~~~~~i~~~~~~~~r~~~l~~~~~~f~vGa~i~Pli~~~ll~~~~~W~~~y~  166 (394)
T PRK03699         87 AGLMFSHSLALFSIAMFVLGLVSGITMSIGTFLITHVYEGRQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYL  166 (394)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             99998152999999999998678999988999999970600788999999999988999999999999856998899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             78888877778887616788640221011111123331000000000256777887631001468887654554315311
Q gi|254780967|r  163 CMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN  242 (398)
Q Consensus       163 ~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (398)
                      +.+++.++..++.+. .+.+..++++++.+.+.. +   + ..++..+...+...+..+...++.++.|.++++..+.+.
T Consensus       167 ~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~-~---~-~~~~~~~~~~i~~f~yv~~e~~~~~W~ptyl~~~~g~~~  240 (394)
T PRK03699        167 CIGLVAVAIFILTLF-SEFPALGKHAPKTEAPVV-K---S-KWNFGVIFLAIAALLYILAQLTFISWVPEYAQKKFGMSL  240 (394)
T ss_pred             HHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHH-H---H-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf             999999999999998-258732224553323203-4---3-026089999999999999999999999999998279998


Q ss_pred             C-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             0-158899886576778899999850015651246887788899999999873257776403799899899999999999
Q gi|254780967|r  243 L-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS  321 (398)
Q Consensus       243 ~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (398)
                      . .+...+....+..+|.++.+++.||++++|..........    ..........   ............|+..+.++|
T Consensus       241 ~~A~~~~S~fw~~~~iGrl~~~~l~~r~~~~~~l~~~~~~a~----~~~~~~~~~~---~~~~~~~~~~~~Gff~a~iyp  313 (394)
T PRK03699        241 EDAGNLVSNFWMAYMVGMWIFSFILRFFDLQRILTVLAGLAL----VLMYLFVTTD---NPAHMAYLILGLGFFSSAIYT  313 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHH
T ss_conf             899999999999999999999999988437999999999999----9999999758---689999999999999977889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999853466769999999999999999999999999831179
Q gi|254780967|r  322 NFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTY  366 (398)
Q Consensus       322 ~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~  366 (398)
                      ...+...+..|+..+++.+.+...+..++.+.+.+.|.+.|....
T Consensus       314 ~~~s~~~~~~~~~~~~~vs~il~~g~~G~~~~P~i~G~i~~~~G~  358 (394)
T PRK03699        314 TIITLGSQQTKVASPKLVNFILTCGTIGTMLSFVVTGPIVAHFGL  358 (394)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999875555318799999999989999999999999998628


No 22 
>pfam07690 MFS_1 Major Facilitator Superfamily.
Probab=100.00  E-value=1.8e-44  Score=261.60  Aligned_cols=337  Identities=21%  Similarity=0.344  Sum_probs=250.5

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999988657669999999-9998199988999999999999999999999999865082899999999999999985100
Q gi|254780967|r   10 LMAINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI   88 (398)
Q Consensus        10 ~~~~~~~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a   88 (398)
                      ...+..++.+++.|++|. +++|+|.|+.|++ +..+.+.++..+++++.|+++||+|||++++.+..+..++.+.++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ig-~~~s~~~~~~~i~~~~~G~l~Dr~g~k~~~i~~~~~~~i~~~~~~~~   82 (345)
T pfam07690         4 AAFLAGLGRSLLGPALPLYLAEDLGISPTEIG-LLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFA   82 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999988398999999-99999999999999999999999096999999999999999999997


Q ss_pred             CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             11011100223210011111110001233210001111221223310001111111111222211111101456788888
Q gi|254780967|r   89 NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVIT  168 (398)
Q Consensus        89 ~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~  168 (398)
                      +|++.+++.|++.|++.+...+...++++|++|+|||++.+++.+...++|..++|.+++.+.+ ..+||+.|+..++..
T Consensus        83 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ig~~i~~~l~~-~~~~~~~f~~~~~~~  161 (345)
T pfam07690        83 SSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLAS-LFGWRAAFLILAILA  161 (345)
T ss_pred             CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf             5799999999998702210008999999840899999999999988602454312489999997-014889999999999


Q ss_pred             HHHHHHHHHHCCCCCCHHHHCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHH
Q ss_conf             7777888761678864022101111--112333100000000025677788763100146888765455431531-1015
Q gi|254780967|r  169 TFITLWYYIRFPETLDPRDVRPLNL--YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFP  245 (398)
Q Consensus       169 ~~~~~~~~~~~pet~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  245 (398)
                      .+..+......+|+++++++++.+.  +...+..+. .++++.+...............+....|.+ .+.++.+ ...+
T Consensus       162 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  239 (345)
T pfam07690       162 LLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPWKL-LLRDPVLWLLLALLLFGFAFFALFTYLPLY-QEVLGLSALLAG  239 (345)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHH
T ss_conf             999999999948885322234302220120235999-875799999999999999999999999999-998099889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88998865767788999998500156512468877888999999998732577764037998998999999999999999
Q gi|254780967|r  246 IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS  325 (398)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                      .......+...++..+.+++.||+++|+..........+...........    ...........+.+.+.+...+....
T Consensus       240 ~~~~i~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~i~g~~~~~~~~~~~~  315 (345)
T pfam07690       240 LLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLT----ESSLWLLVALLLLGFGAGLVFPALNA  315 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999073799999999999999999999861----21999999999999999999999999


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9985346-6769999999999999999999
Q gi|254780967|r  326 ISMEPFS-HLAGTASSIFGFINTVISTILG  354 (398)
Q Consensus       326 ~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~  354 (398)
                      ...|..| |.+|++.++.++.+..++.++|
T Consensus       316 ~~~~~~p~~~~g~~~g~~~~~~~ig~~igP  345 (345)
T pfam07690       316 LASDLAPKEERGTASGLYNTAGSLGGALGP  345 (345)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999878998999999999999999888392


No 23 
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00  E-value=1.7e-43  Score=256.33  Aligned_cols=339  Identities=14%  Similarity=0.093  Sum_probs=248.2

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-----CCHHHH
Q ss_conf             699999999998199988999999999999999999999999865082899999999999999985100-----110111
Q gi|254780967|r   20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-----NSFTGM   94 (398)
Q Consensus        20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-----~~~~~l   94 (398)
                      -+..+.|.|.+|+|.|..|.| ++.|+|.++|++++++.|.++||.|.|+.+-.++.+.++.+...+++     ++++.+
T Consensus        48 nfs~a~p~l~~elgls~~~lG-~I~Saf~i~Yaigkf~~G~l~Dr~~~R~fl~~gl~ls~i~~~~fG~~~~~~~~s~~~~  126 (463)
T PRK09556         48 NFNIAQNDMIETYGLSMTELG-MIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGSVSLFLM  126 (463)
T ss_pred             HHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             289767999988398988999-9999999999998754524453157415599999999999999999886368899999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHH
Q ss_conf             0022321001111111000123321000111122122331000111111111122221--11111014567888887777
Q gi|254780967|r   95 LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA--LSGGWIGIFVCMGVITTFIT  172 (398)
Q Consensus        95 ~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~--~~~gWr~~f~~~~~~~~~~~  172 (398)
                      ++.+.+.|+.++..+|.....+++|+|++||++++++.+...++|.++++.+......  .+.+|++.|++.+++.++..
T Consensus       127 ~~l~~lnG~fQ~~GwP~~~~~l~~WF~~~eRG~~~giwn~s~nvG~~l~~~ia~~~~~~~~~~~~~~~Fi~pgii~i~~~  206 (463)
T PRK09556        127 IAFYALSGFFQSTGGPCSYSTITKWTPRRKRGTYLGFWNISHNIGGAGAAGVALFGANYFFDGHVIGMFIFPSIIALIIG  206 (463)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             99999988784454508999999973931121332477420103788999999999999824329999999999999999


Q ss_pred             HHHHHHCCCCCCH------HH-----HCCCC--CCC----CCCC-CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             8887616788640------22-----10111--111----2333-10000000002567778876310014688876545
Q gi|254780967|r  173 LWYYIRFPETLDP------RD-----VRPLN--LYA----ILHS-FSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY  234 (398)
Q Consensus       173 ~~~~~~~pet~~~------~~-----~~~~~--~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (398)
                      +..++.++|++++      ++     .++.+  .++    .++. .+.+++||..|..++...+.+...+++..+.|.++
T Consensus       207 i~~~~~~~d~Pe~~Gl~~~ee~~~~~~~~~~~~~~~~~~s~~~~~~~~vl~np~vw~lala~~f~y~Vryg~~~WlP~YL  286 (463)
T PRK09556        207 FIGLRYGSDSPEEYGLGKAEELFGEEISEEDKETESNDMTKWQIFVEYVLKNKVIWLLCFANIFLYIVRIGIDQWSPVYA  286 (463)
T ss_pred             HHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999817997775999756551454221111112234545789999997272999999999999999999987649999


Q ss_pred             HHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             543153110-1588998865767788999998500156512468877888999999998732577764037998998999
Q gi|254780967|r  235 VGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS  313 (398)
Q Consensus       235 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
                      .+..+.+.. .+......-++.++|+++.|+++|++..||..... ..... ....+.... ...  +........++.|
T Consensus       287 ~~~~g~s~~~a~~~~~lfevggi~G~ll~G~iSD~~~GRR~~~~~-~~l~~-~~~~l~~y~-~~~--~~~~~~~~l~~iG  361 (463)
T PRK09556        287 FQELKFSKEDAIQGFTLFEIGALVGTLLWGWLSDLANGRRALVAC-IALAL-IIFTLGVYQ-HAT--SVYMYLASLFALG  361 (463)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHH-HHHHHHHHH-HCC--CHHHHHHHHHHHH
T ss_conf             971499977876999999999998999898998741586089999-99999-999999998-178--5899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf             9999999999999985346-6769999999999999-9999999999998311
Q gi|254780967|r  314 FQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTV-ISTILGIIIGQSFNGT  364 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~  364 (398)
                      +...-........+.|..| +..|+++++.++.++. +++.++..+|.+.|++
T Consensus       362 f~I~GP~~Lig~~a~~~~pk~a~gta~G~~G~f~yl~G~~~a~~~~g~i~d~~  414 (463)
T PRK09556        362 FLVFGPQLLIGVAAVGFVPKKAIGVADGIKGTFAYLIGDSFAKLGLGMIADGT  414 (463)
T ss_pred             HHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99802999999999985045355454412105898875887877799886145


No 24 
>PRK12382 hypothetical protein; Provisional
Probab=100.00  E-value=1.9e-42  Score=250.47  Aligned_cols=362  Identities=15%  Similarity=0.126  Sum_probs=249.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             9999999998865766999999999-981999889999999999999999999999998650828999999999999999
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKIS-DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF   83 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~-~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~   83 (398)
                      +.+....++..++..+.+|.+|... +|+|.|+.++| ++.+.|.++..+.++++|+++||+||||+++.|.+++++..+
T Consensus        18 ~~l~~~~F~~~~g~~~~~PvlP~y~~~~LGas~~~vG-li~~~f~la~~~~~p~~G~l~Dr~GRk~vll~gl~~~a~~~l   96 (393)
T PRK12382         18 FRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVG-IAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL   96 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             9999999999999987999999999973698688999-999999999999999888999804970899999999999999


Q ss_pred             HHHCCC--------CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
Q ss_conf             851001--------101110022321001111111000123321000111122122331000111111111122221111
Q gi|254780967|r   84 IMVTIN--------SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG  155 (398)
Q Consensus        84 ~~~~a~--------~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~  155 (398)
                      +..++.        +++.+++.|+++|++.+...+...+++.|..|+++|++.+++.+.+...+..+||.+|+.+ .+++
T Consensus        97 ly~~a~~~~~~~~~~~~~L~~~R~l~G~~~a~~~~~~~a~~~d~~p~~~rG~~mg~~g~~~~~g~aiGp~lG~~l-~~~~  175 (393)
T PRK12382         97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPQHSGKVMSWNGMAMYGALAAGAPLGLLI-HSHF  175 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf             999998877767899999999999989889999998999999864733232898998899999999999899999-9986


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             11014567888887777888761678864022101111112333100000000025677788763100146888765455
Q gi|254780967|r  156 GWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYV  235 (398)
Q Consensus       156 gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (398)
                      +++..+.+..++.++..... ...||+.++++++    ++.++..+      ..+...+...+....+....+..+.+..
T Consensus       176 g~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~~~~----~~~~~~~~------~~~~~~l~~~l~~~~~~~i~~f~~ly~~  244 (393)
T PRK12382        176 GFAALALTTMVLPLLAWAFN-GTVRKVPALAGER----PSLWSVVG------LIWKPGLGLALQGVGFAVIGTFVSLYFA  244 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCC----CCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             69999999999999999983-4577887655556----65899999------9999899999999999999999999998


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             43153110158899886576778899999850015651246887788899999999873257776403799899899999
Q gi|254780967|r  236 GIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQ  315 (398)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (398)
                      + .+.+ ..+..+...+....+.....||+.||+|++|....+..+.....   .......    +.+.......+.+.+
T Consensus       245 ~-~~~~-~~g~~~~~~~~~~~l~r~~~G~l~Dr~G~~~v~~~gl~l~a~gl---~~l~~~~----~~~~ll~~~~l~G~G  315 (393)
T PRK12382        245 S-KGWA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGL---LLLWLAP----TAWVALAGAALTGAG  315 (393)
T ss_pred             H-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHC----CHHHHHHHHHHHHHH
T ss_conf             7-3606-89999999999999999998289887085388999999999999---9999862----099999999999999


Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHC
Q ss_conf             9999999999998534-6676999999999999999999999999983117999999-99999999999999942
Q gi|254780967|r  316 FGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIG-FFGIAVSSFICILIVEK  388 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  388 (398)
                      .+...|..++...+.. ++++|++++.++.....+..+++++.|.+.|+..+..... ...+.+.+.....+..|
T Consensus       316 ~g~~~P~l~al~~~~~~~~~rG~a~g~~~~~~dlG~~~Gp~~~G~va~~~G~~~~F~~~av~~l~~l~v~~~~~r  390 (393)
T PRK12382        316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIGVTILSFR  390 (393)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             988788899999975893310379999999999999999999999999749389999999999999999999963


No 25 
>TIGR00893 2A0114 d-galactonate transporter; InterPro: IPR004744 D-galactonate transporters and other proteins that belong to the phthalate permease family are members of this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=3.9e-42  Score=248.76  Aligned_cols=343  Identities=15%  Similarity=0.146  Sum_probs=271.4

Q ss_pred             HHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCC------CHH
Q ss_conf             9999999-999819998899999999999999999999999986508-28999999999999999851001------101
Q gi|254780967|r   21 ILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-RKIVMMFGLVIHIISTFIMVTIN------SFT   92 (398)
Q Consensus        21 ~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~g~~~~~i~~~~~~~a~------~~~   92 (398)
                      +.-+-|+ |+|||++|+.+.+ +..|+|..+|.++|++.|.+.||+| -|+++....+++++.+.+.++.+      ++.
T Consensus        13 ~S~Aa~~Gl~~DLg~~~~~~g-~~~saF~~gY~~~~~p~g~~Ldr~Gh~~~~~~~~~v~Wg~f~~~~af~~~Fs~~~~~~   91 (427)
T TIGR00893        13 LSFAAPTGLQEDLGLSAAQYG-YVFSAFSIGYVLGQFPGGLLLDRIGHARKTLAVAIVLWGVFTLLQAFAGGFSTVTAYV   91 (427)
T ss_pred             HHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999998666876088776888-9999999999999666898875211589999999999999999997556544676899


Q ss_pred             HHCCCCCCCCCC--CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC------CCHHHHHH
Q ss_conf             110022321001--1111110001233210001111221223310001111111111222211111------10145678
Q gi|254780967|r   93 GMLCMRLIQGIG--GAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG------WIGIFVCM  164 (398)
Q Consensus        93 ~l~~~r~l~G~g--~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g------Wr~~f~~~  164 (398)
                      .|++.|++.|++  ++...|.-.-++++|||++||+++.|+.+.+..+|.++++++.+.+.. +.+      ||+.|.+.
T Consensus        92 ~l~~lR~l~G~aGLEa~~~Pg~~~~~~~WFP~~eR~~~~s~f~~~~~lg~~~~~Pl~~~i~~-~~~~~g~~gW~~~F~~~  170 (427)
T TIGR00893        92 SLYILRVLLGAAGLEAPLFPGIIKIVASWFPAKERATAVSIFNSAQYLGGIIGGPLVGWILV-HFSSMGMKGWQWVFIIE  170 (427)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHH
T ss_conf             99999999856567777513689987300465575779999999999999999899999998-74466520138999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHH---------------------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             88887777888761678864022---------------------101111112333100000000025677788763100
Q gi|254780967|r  165 GVITTFITLWYYIRFPETLDPRD---------------------VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAI  223 (398)
Q Consensus       165 ~~~~~~~~~~~~~~~pet~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (398)
                      ++++++..+..+..++|++.+++                     +++.+.+..+.+.++.++||+.|...+...+.....
T Consensus       171 G~~~~~~gv~~~~~~~d~p~~a~~~~~e~~~~~~~~~~~~~~~~~~k~~~~~k~~~~~~~L~~r~~~~~~~~~~~~~~~~  250 (427)
T TIGR00893       171 GILGIILGVLWLKFIKDKPQKAKWLTEEEKYIVVGGLLAEQDDSKGKGPSEPKKYQIKELLKDRRVWGLALGQFLVNILL  250 (427)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf             79999999999986079754766454899987640342000033456787760899999981559989999999999988


Q ss_pred             HHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------HHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             1468887654554315311-0158899886576778899999850015651------24688778889999999987325
Q gi|254780967|r  224 LGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRR------VSHYSLLIFFMITGSWLLVQITS  296 (398)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  296 (398)
                      +.|.++.|.++.+..+.+. +.++...+..+...++..+.++++|...+|+      +..............+......+
T Consensus       251 ~~f~~W~P~yl~~~~g~~~l~~g~~~~~P~~~g~~G~~L~g~~SD~~~~r~~~fW~~l~~a~~~~~~~~~~~s~~~~~~~  330 (427)
T TIGR00893       251 YFFLTWFPTYLKQERGLSILEAGFLASLPGIVGFVGMVLGGILSDLLLRRGARFWKSLVFARKTAIIAGLVLSLLMFATN  330 (427)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999998653145899999999999999999999999867887623541356678999999999999999999861


Q ss_pred             CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf             7776--40379989989999999999999999985346-67699999999999-9999999999999983117
Q gi|254780967|r  297 NHPI--HLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFIN-TVISTILGIIIGQSFNGTT  365 (398)
Q Consensus       297 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~-~~~~~~~~~~~g~~~~~~~  365 (398)
                      ....  .....+....+..++.+...+...+...+..| +.+|.+.|++++.+ +.++...|.++|++.+.+.
T Consensus       331 ~~~~Gm~~~~~~~~~~l~~fg~~~l~~~~w~~~s~~~~~~~~g~~~G~i~~~GY~~~~i~~P~~~G~~~~~~G  403 (427)
T TIGR00893       331 SLVNGMPPWAALALVALAFFGAGLLGAILWAVISDVLPGNIAGLTGGLINSLGYNLGGIVGPIVIGYIAATTG  403 (427)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             0310179999999999999999998876655403105751245688999999998999999999977632666


No 26 
>PRK10054 putative MFS-type transporter YdeE; Provisional
Probab=100.00  E-value=3.1e-41  Score=243.83  Aligned_cols=373  Identities=12%  Similarity=0.100  Sum_probs=271.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999886576699999999-998199988999999999999999999999999865082899999999999999985
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCLPKI-SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~lp~i-~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      +..-+.+..++..+..|.++.+ .+++|.|..++| +.++...+...+++++.|+++||+||||+++.+..+.+++...+
T Consensus        12 Ll~~~~l~~~g~~~~~Pfl~iYl~~~~gls~~~vG-~il~~~~~~~~~~~l~gG~L~DR~Grk~v~l~g~~~~a~~~~~l   90 (395)
T PRK10054         12 LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIG-YAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI   90 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999986299889999-99999999999988520144663284499999999999999999


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                      +++++++.+.+.+++.|++.+...|+..++++|..|+|+|.+++++.....++|..+||.+|+.+..  .+++.+|++.+
T Consensus        91 ~~~~~~~~~~l~~~l~g~~~~~~~pa~~A~iaD~~~~~~R~~~f~l~y~~~NlG~aiGpllGg~l~~--~~~~~~F~~~a  168 (395)
T PRK10054         91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAA  168 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHH
T ss_conf             9998899999999999999998999999999843887789899999999999999999999999999--65118999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC--CCC-C
Q ss_conf             8887777888761678864022101111112333100000000025677788763100146888765455431--531-1
Q gi|254780967|r  166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY--QLG-N  242 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~  242 (398)
                      +...+..+...+..||+.+++++++.+    ..+.+.++|||.+..+.+...+.......+....|.+.....  +.+ .
T Consensus       169 ~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~l~dr~~~~~~~~~~l~~~~~~q~~~~l~~~~~~~~~~~~~~~  244 (395)
T PRK10054        169 ICSAFPLVFIQIWVKRSEKAIATETAS----VWSPKVLLRDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEK  244 (395)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCC----CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             999999999999971456664455566----6773155225017999999999999999999998899999811465098


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             01588998865767788999998500156512468877888999999998732577764037998998999999999999
Q gi|254780967|r  243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN  322 (398)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (398)
                      ..+..++.+++..++..+...+..+|++.++....+.............   ..   .+.+.......+...+-.+..|.
T Consensus       245 ~~~~l~~~N~v~Vv~lq~~v~r~~~~~~~~~~l~~G~ll~~~g~~~~~~---~~---~~~~~~~i~~~ifTiGE~i~~P~  318 (395)
T PRK10054        245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF---SG---NNLLFWGMSAAVFTVGEIIYAPG  318 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999998999999985168159999999999999999999---87---78999999999999999998655


Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             999998534-6676999999999999999999999999983117999999999999999999999422000343
Q gi|254780967|r  323 FSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT  395 (398)
Q Consensus       323 ~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  395 (398)
                      .++...+.. +|.||+..+..+ .++.+..+++.+.|.+.++...  ...+..+++++.+..++..+....|+.
T Consensus       319 ~~~~v~~laP~~~RG~Y~g~~s-l~~lG~~igP~~gG~ll~~~~~--~~~f~~~~~~~~~~~l~~~~g~~~~~~  389 (395)
T PRK10054        319 EYMLIDNIAPPGMKASYFSAQS-LGWLGAAVNPLVSGVILTTLPP--WSLFVILALAIVAAWLLMLKGMRARPW  389 (395)
T ss_pred             HHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9999987399340325898999-9999999999999999987266--699999999999999999726678864


No 27 
>TIGR00881 2A0104 phosphoglycerate transporter family protein; InterPro: IPR000849   Proteins in this group are involved in the transport system that mediates the uptake of a number of sugar phosphates as well as the regulatory components that are responsible for induction of this transport system by external glucose 6-phosphate. In Escherichia coli its role in transmembrane signalling may involve sugar-phosphate-binding sites and transmembrane orientations similar to those of the transport protein . The following proteins in this entry, involved in the uptake of phosphorylated metabolites, are evolutionary related , :  E. coli, Bacillus subtilis and Haemophilus influenzae glycerol-3- phosphate transporter (gene glpT). Salmonella typhimurium phosphoglycerate transporter (gene pgtP). E. coli and S. typhimurium hexose-6-phosphate transporter (gene uhpT). E. coli and S. typhimurium protein uhpC. UhpC is necessary for the expression of uhpT and seems to act jointly with the uhpB sensor/kinase protein. Human glucose 6-phosphate translocase .    These proteins of about 50 kDa apparently contain 12 transmembrane regions.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=9.6e-41  Score=241.12  Aligned_cols=342  Identities=17%  Similarity=0.230  Sum_probs=266.5

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC----CHHHHCC
Q ss_conf             999999999981999889999999999999999999999998650828999999999999999851001----1011100
Q gi|254780967|r   21 ILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN----SFTGMLC   96 (398)
Q Consensus        21 ~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~----~~~~l~~   96 (398)
                      ..-+.|+|+||+++|.+|.| ++.|.+.+.|++++.+.|.++||.+.|..+..|+++.++.++..++++    +++.+++
T Consensus        14 f~~a~P~l~E~~~L~~~dlG-~~~s~~~i~Yg~sK~~~G~~sDr~~~r~fl~~GL~l~a~v~~~~gfs~watS~l~~~~~   92 (404)
T TIGR00881        14 FALAMPYLVEEIGLSKTDLG-LLLSSFSIAYGISKFVMGMVSDRSNPRVFLAIGLILCAIVNIFFGFSTWATSSLWVMAA   92 (404)
T ss_pred             HHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             99888998862288875788-99999999998746775665326764899999999999999998852235789999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHH
Q ss_conf             2232100111111100012332100011112212233100011111111112222111111014--56788888777788
Q gi|254780967|r   97 MRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI--FVCMGVITTFITLW  174 (398)
Q Consensus        97 ~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~--f~~~~~~~~~~~~~  174 (398)
                      .+++.|+.+|...|++..++.+|+|++||++..++++.+.++|..+.|++-........+||+.  |...+.++++..++
T Consensus        93 l~~l~G~fQG~G~P~~~r~~~~W~~~~eRGt~~~~wn~~~nvGG~~~pp~~~~~~~~~~~w~~~~~~~~~g~~aii~s~~  172 (404)
T TIGR00881        93 LMALNGLFQGMGWPPCGRLLTKWFSRSERGTWVAIWNISHNVGGGLLPPLVLFGIALLYSWHVVSSFIVPGIIAIIVSLI  172 (404)
T ss_pred             HHHHHHHHHHHCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999887750675212402321576531126677888988757899999999999881655688999999999999889


Q ss_pred             HHHHCCCCCCH-----------HH----------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             87616788640-----------22----------1011111123331000000000256777887631001468887654
Q gi|254780967|r  175 YYIRFPETLDP-----------RD----------VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQI  233 (398)
Q Consensus       175 ~~~~~pet~~~-----------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (398)
                      ++...+|++.+           |+          +++++.++.....+.+++||..|...+...+.+..-+....+.|.+
T Consensus       173 ~~~~~~~~p~~~GL~~~e~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~vl~n~~lW~is~~~~fVy~vr~~~~~W~~~Y  252 (404)
T TIGR00881       173 CLLLLRDSPQSVGLPKLEEMPNEEGGGLPEEDKEKKEEELTKKEIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWGPLY  252 (404)
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             54411577777886975567688886336503344353031577656777416135689999999999999997030566


Q ss_pred             HHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCHHH
Q ss_conf             5543153110-1588998865767788999998500-----15651246887788899999999873--25777640379
Q gi|254780967|r  234 YVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEK-----FGIRRVSHYSLLIFFMITGSWLLVQI--TSNHPIHLLIF  305 (398)
Q Consensus       234 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  305 (398)
                      +.+..+.+.. ....+...-++.++|++++||++||     .-++|....++...+.+..+......  ..+.+......
T Consensus       253 L~~~kg~s~~~~~~~~~~~E~gglvGtll~GW~SDkA~~~~~~~~~R~~~~~~~~ali~~~~~~~~~~~~~~~~n~~~~~  332 (404)
T TIGR00881       253 LTQEKGFSKEKASAAFTLFELGGLVGTLLAGWLSDKATRKFLFKGRRAPLAVIFMALIIVSLLVYWLIPAANYTNKLMDL  332 (404)
T ss_pred             HHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             56530655102314457888878899999999999999988515885356899999999999999874226887358999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q ss_conf             9899899999999999999999853-46676999999999999999-99999999998311
Q gi|254780967|r  306 IAFFFLASFQFGLINSNFSSISMEP-FSHLAGTASSIFGFINTVIS-TILGIIIGQSFNGT  364 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~~~~~-~~~~~~~g~~~~~~  364 (398)
                      +..+..+.+.+|...-.. ..+.|. +++..|++.++.+++.+++| ..++..++.+.|++
T Consensus       333 ~~~~~~Gf~~yGp~~L~g-~~A~~~aP~~a~G~a~G~~Gf~ay~gGs~~A~~~~g~~~~~t  392 (404)
T TIGR00881       333 ICLFALGFLVYGPQMLIG-VIASELAPKKAAGTAAGFVGFFAYLGGSILAGLPLGYLADGT  392 (404)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
T ss_conf             999999988889999999-999720158899998999998888799888624462343144


No 28 
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00  E-value=1.2e-40  Score=240.54  Aligned_cols=369  Identities=19%  Similarity=0.210  Sum_probs=271.8

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
Q ss_conf             69999999999819998899999999999999999999999986508289999999999999998510011011100223
Q gi|254780967|r   20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRL   99 (398)
Q Consensus        20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~   99 (398)
                      .+.-+.|.+.||.+.|.+|.| .+.|.+.++|+++..+.|.++||.+.|..+-.|+.+.++.+++.+++++++.+.+..+
T Consensus        47 nF~~a~p~l~e~~~lsk~~lG-~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~  125 (448)
T COG2271          47 NFNLAMPALIEDGGLSKTQLG-ILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWV  125 (448)
T ss_pred             HHHHCCHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             676306778874598989999-9999999999998887665214678754425879999999999862179999999999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2100111111100012332100011112212233100011111111112-222111111014567888887777888761
Q gi|254780967|r  100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQ-ATVALSGGWIGIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus       100 l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~-~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~  178 (398)
                      ++|...|..+|++...+++|++++||++..++.+.+-++|..+.|++.. +....+.+||..|++.++++++..++.++.
T Consensus       126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~  205 (448)
T COG2271         126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL  205 (448)
T ss_pred             HHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98988527983778689987585456746887454442235057999999999754256567788789999999999999


Q ss_pred             CCCCCCH------HHH--------CCCCCCC---CC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
Q ss_conf             6788640------221--------0111111---23-3310000000002567778876310014688876545543153
Q gi|254780967|r  179 FPETLDP------RDV--------RPLNLYA---IL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL  240 (398)
Q Consensus       179 ~pet~~~------~~~--------~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (398)
                      .+|++..      |+-        ++.+..+   .+ .-.+.+++||..|...+...+.+..-++...+.|.++.+..+.
T Consensus       206 ~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~  285 (448)
T COG2271         206 LRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF  285 (448)
T ss_pred             HCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             47991114999878860682223332025788649999999997280999999999999999999864278999980187


Q ss_pred             CCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHH
Q ss_conf             110-15889988657677889999985001565124688778889999999987325777640379989989999-9999
Q gi|254780967|r  241 GNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASF-QFGL  318 (398)
Q Consensus       241 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  318 (398)
                      +.. .+...+..-.+...|+++.|+++||.-+.|....++........+.........  .+.......++..|+ -+|.
T Consensus       286 s~~~a~~a~~lfE~agl~G~LL~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~--~~~~l~~~~l~~iGf~IyGP  363 (448)
T COG2271         286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPN--GSYLLDAILLFIIGFLIYGP  363 (448)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHH
T ss_conf             7777889999999976278899999887650466464999999999999998762877--55999999999999998359


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             99999999985346-6769999999999999-9999999999998311799-9999999999999999999422000
Q gi|254780967|r  319 INSNFSSISMEPFS-HLAGTASSIFGFINTV-ISTILGIIIGQSFNGTTYP-ITIGFFGIAVSSFICILIVEKNQMF  392 (398)
Q Consensus       319 ~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  392 (398)
                      . -.....+.|..| +.+|++.++.+..++. +.+..+..+|...|...|. ....+.+.++++.+.++...+.+..
T Consensus       364 q-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~~~  439 (448)
T COG2271         364 Q-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAEER  439 (448)
T ss_pred             H-HHHHHHHHCCCCHHHCCCHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             9-999999842651743010202033488877488607763046753687515999999999999999999851510


No 29 
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00  E-value=1.1e-38  Score=229.75  Aligned_cols=328  Identities=20%  Similarity=0.366  Sum_probs=254.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999886576699999999998199988999999999999999999999999865082899999999999999985
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      ++.....+..++...+.|.+|.+.+|+|.++.+.+ +..+.+.+++.+++++.|+++||+||||.+..+..+..++.+.+
T Consensus         3 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~i~~~~~g~l~D~~grk~~~~~~~~~~~i~~i~~   81 (352)
T cd06174           3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAG-LIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL   81 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999793999999-99999999999999999999998096999999999999999999


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                      ++++|++.+++.|+++|++.+...+...+++.|++|+|||++.++..+.+.++|..++|.+++.+. .+.+||+.|++.+
T Consensus        82 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~ig~~i~~~l~-~~~~~~~~~~~~~  160 (352)
T cd06174          82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA-ESLGWRWLFLILA  160 (352)
T ss_pred             HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHH
T ss_conf             976329999999999862210010799999860489999999999989887567899999999999-8644899999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCH
Q ss_conf             8887777888761678864022101111112333100000000025677788763100146888765455431531-101
Q gi|254780967|r  166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLF  244 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  244 (398)
                      ++.++..+...+..                           |..+...+...........+....+....+..+.+ ...
T Consensus       161 ~~~~~~~i~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (352)
T cd06174         161 ILGLLLALLLLFLL---------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEA  213 (352)
T ss_pred             HHHHHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             99999999999999---------------------------999999999999999999999999999998248987777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             58899886576778899999850015651246887788899999999873257776403799899899999999999999
Q gi|254780967|r  245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS  324 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (398)
                      +.......+...++..+.+++.||+++|+........  .............    ............+.+.+...+...
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~  287 (352)
T cd06174         214 GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLL--LAALGLLLLALAP----SLALLLVALLLLGFGLGFAFPALL  287 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7888999999999999999999982738999999999--9999999999886----599999999999999999999999


Q ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99985346-676999999999999999999999999983117999
Q gi|254780967|r  325 SISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPI  368 (398)
Q Consensus       325 ~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~  368 (398)
                      ....+..| +.++++.++.+..+..++.+.+.+.|...|...+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~i~g~i~~~~g~~~  332 (352)
T cd06174         288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGG  332 (352)
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_conf             999998796079999999999999999999999999999878999


No 30 
>pfam00083 Sugar_tr Sugar (and other) transporter.
Probab=100.00  E-value=2.7e-38  Score=227.61  Aligned_cols=366  Identities=19%  Similarity=0.195  Sum_probs=226.7

Q ss_pred             HHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC--C
Q ss_conf             999999999819---------99889999999999999999999999998650828999999999999999851001--1
Q gi|254780967|r   22 LPCLPKISDSLH---------LSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN--S   90 (398)
Q Consensus        22 ~p~lp~i~~~l~---------~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~--~   90 (398)
                      ...+|...++++         +|+.+.+ ++.|.+++|+.+|++++|+++||+|||++++.+..+..++.+++++++  |
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~i~s~~~iG~~iG~~~~G~l~Dr~GRk~~l~~~~~~~~i~~~l~~~a~~~~  100 (449)
T pfam00083        22 FLTLIKFFKRFGALTSIGACAASTVLSG-LIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKS  100 (449)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             9974999997398777777788798999-999999999999999999998740779999999999999999999867573


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHH
Q ss_conf             0111002232100111111100012332100011112212233100011111111112222--11111101456788888
Q gi|254780967|r   91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV--ALSGGWIGIFVCMGVIT  168 (398)
Q Consensus        91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~--~~~~gWr~~f~~~~~~~  168 (398)
                      ++.++++|+++|++.|...+....+++|+.|+++|++..+..+....+|..+++.++..+.  ....+||+.|.+.++.+
T Consensus       101 ~~~l~i~R~l~G~~~G~~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~i~~~~~  180 (449)
T pfam00083       101 FYMLIVGRVIVGLGVGGISVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPA  180 (449)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
T ss_conf             99999999999999999999999999986887344687898878888999999999999951488643000111421648


Q ss_pred             HHHHHHHHHHCCCCCCH-------HHHC-----------------------CCCCCCCCCCCCCCCCCCHHHHHHHHH--
Q ss_conf             77778887616788640-------2210-----------------------111111233310000000002567778--
Q gi|254780967|r  169 TFITLWYYIRFPETLDP-------RDVR-----------------------PLNLYAILHSFSLIFKHRASTLYNIAN--  216 (398)
Q Consensus       169 ~~~~~~~~~~~pet~~~-------~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--  216 (398)
                      ++..+ ....+||+++-       ++.+                       +.+.++......+.++.+.........  
T Consensus       181 ~l~~~-~~~~lpESPr~l~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (449)
T pfam00083       181 ILLLI-GLLFLPESPRWLVLKGKLEEARAVLAKLRGVSDVDQEIQEEKDSLERSVEAEKASWLELFRGKTVRQRLLMGVM  259 (449)
T ss_pred             HHHHH-HHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHH
T ss_conf             76421-01378998689998485999999999982888542889999999999875302106888627205799999999


Q ss_pred             --H-HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --8-7631001468887654554315311015889988657677889999985001565124688778889999999987
Q gi|254780967|r  217 --S-LTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ  293 (398)
Q Consensus       217 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~  293 (398)
                        . ...........+.+.+..+. +.++. ............++..+..++.||+|+|+....+.....+.........
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~~~l~d~~GRr~~~~~~~~~~~i~~~~~~~~~  337 (449)
T pfam00083       260 LQIFQQLTGINAIFYYSPTIFETL-GLSDS-LLVTIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFLVLGVAL  337 (449)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC-CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999987675779998789999984-99768-9999999999999998788875460869999999999999999999999


Q ss_pred             HCC-CCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             325-77764037998998999999999-9999999985346-67699999999999999999999999998311799999
Q gi|254780967|r  294 ITS-NHPIHLLIFIAFFFLASFQFGLI-NSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITI  370 (398)
Q Consensus       294 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  370 (398)
                      ... ....................... .+....+..|.+| +.|+++.++.+..+..++.+.+.+.+.+.+........
T Consensus       338 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~lg~~v~~~~~~~l~~~~~~~~~~  417 (449)
T pfam00083       338 LGVAKSKGAGIVAIVFILLFIAFFALGWGPVPWVIVSELFPLGVRPKAMAIATAANWLANFLIGFLFPIITGAIGGYVFL  417 (449)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             85346612699999999999999997788999999786375869999999999999999999999999999987298999


Q ss_pred             HHHHHHHHHHH-HHHHHHCCHH
Q ss_conf             99999999999-9999942200
Q gi|254780967|r  371 GFFGIAVSSFI-CILIVEKNQM  391 (398)
Q Consensus       371 ~~~~~~~~~~~-~~~~~~~~~~  391 (398)
                      .+.++.+++.+ ..++.++.|-
T Consensus       418 i~~~~~~~~~i~~~~~~PETkg  439 (449)
T pfam00083       418 VFAGLLVLFILFVFFFVPETKG  439 (449)
T ss_pred             HHHHHHHHHHHHHHEEEECCCC
T ss_conf             9999999999997505423999


No 31 
>pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.
Probab=100.00  E-value=2.2e-38  Score=228.13  Aligned_cols=345  Identities=16%  Similarity=0.193  Sum_probs=224.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999886576699999999998199988999999999999999999999999865082899999999999999985100
Q gi|254780967|r    9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI   88 (398)
Q Consensus         9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a   88 (398)
                      +..++..+.+++..+++|.|.+|||-. .+.+ |..|+|+++.+..++++|+++|.||||++++.+..++.+++++|+.+
T Consensus        51 l~~~~~~ld~tivatAlP~I~~dl~~~-~~~~-W~~taylLast~~~pl~GkLsDifGRK~~~l~~~~lf~vGsiic~~A  128 (598)
T pfam06609        51 LNVCATYFVLQASASALPNILQDIGQS-ENQG-LFSTLWTMGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVGCTA  128 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEE-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999950027663471699870898-7735-49999999999999737689878367999999999999999999546


Q ss_pred             CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             11011100223210011111110001233210001111221223310001111111111222211111101456788888
Q gi|254780967|r   89 NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVIT  168 (398)
Q Consensus        89 ~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~  168 (398)
                      +|..+++++|.++|+|.|.... ...+++|..++++|.+.+......+.++..+||.+|+.+. .+.+|||.|++...++
T Consensus       129 ~s~~~lI~grai~G~gaG~~~~-~~~ii~~~~~~r~r~~g~~~~~~~~~~~s~~GPllGg~~~-~~~sWRW~Fyinlpi~  206 (598)
T pfam06609       129 NKFNTLLAAMTLLGVAAGPAGA-SPLFIGELMSNKTKFLGLLIVSAPTIAMNGAGPYFGQRLA-IQGNWRWIFYIYIIMS  206 (598)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEHHHHHH
T ss_conf             6699999999999984788888-8876125516541132305999999999766788788842-4788428862215789


Q ss_pred             HHHHHHHHH-HCCCCCCHHHHCCCCCCCC--------------------------------CCC----------------
Q ss_conf             777788876-1678864022101111112--------------------------------333----------------
Q gi|254780967|r  169 TFITLWYYI-RFPETLDPRDVRPLNLYAI--------------------------------LHS----------------  199 (398)
Q Consensus       169 ~~~~~~~~~-~~pet~~~~~~~~~~~~~~--------------------------------~~~----------------  199 (398)
                      .+..++..+ +.|++.++.+.++.+.++.                                |.+                
T Consensus       207 ~va~~~~~~~~~pP~~~~~~~~~~~~~~~l~~iD~~G~~L~~~gl~~lLl~lswGG~~~~pW~S~~VI~~lv~G~v~lv~  286 (598)
T pfam06609       207 AIAVLLIIIWYHPPSFAQLHGKKARKRDELAKLDWIGIFLVIAGTSLFLLGVSWGGKPNNPWNSAKIIGLISSGAGSLVI  286 (598)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999981586200026665436766410484439999999999999996358777775448999999999999999


Q ss_pred             ---------------CCCCCCCCHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHH
Q ss_conf             ---------------1000000000-256777887631001468887654554315311----01588998865767788
Q gi|254780967|r  200 ---------------FSLIFKHRAS-TLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN----LFPIAFAVGGFAMSIAS  259 (398)
Q Consensus       200 ---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  259 (398)
                                     ..+++|+++. ....+..++....++....+.|...+..++.+.    ..+.......++...+.
T Consensus       287 F~~~E~~~~~~~PmiP~rLFk~~r~~~~~~~~~~~~g~~~~~~~~~~P~~~~~v~g~s~~~~~~~~~~~~~~~~~~~~g~  366 (598)
T pfam06609       287 FALYEVFGKPEQPIIPPALFKDTRGFVCILIISSIMGAMHLCLTIIYPQQVINIFGSSLKNWEETAWMSATASFGTGAGV  366 (598)
T ss_pred             HHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             88886440278886888998176199999999999999999999999999986024443324676999999999999999


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf             99999850015651246887788899999999873257776403799899899999999999999999853-46676999
Q gi|254780967|r  260 FINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP-FSHLAGTA  338 (398)
Q Consensus       260 ~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a  338 (398)
                      .+.+.+..+.+..|......... ......++.......+ ...  +...++.+++.|..........+.. .++..|++
T Consensus       367 ~i~g~~~~~~~~~r~~~i~g~~~-~t~~~glls~l~~~t~-~~~--i~~~il~G~GiG~~~q~~~iavQ~~~p~~digva  442 (598)
T pfam06609       367 MILGNLFHLIRHIRWQILVGALW-LTAFLGAMSSINRDNK-NAA--IALSFFSGFVVAWAQDITMLLVQFITTDEDLGVA  442 (598)
T ss_pred             HHHHCEEECCCCCHHHHHHHHHH-HHHHHHHHHHCCCCCC-HHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             98701331034311699999999-9999999983289993-489--9999999997998765778652225998998999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999998
Q gi|254780967|r  339 SSIFGFINTVISTILGIIIGQSF  361 (398)
Q Consensus       339 ~~l~~~~~~~~~~~~~~~~g~~~  361 (398)
                      +++.++.+..+|+++-.+.+.++
T Consensus       443 ts~~~f~RslGGaIGvAI~~sIf  465 (598)
T pfam06609       443 FAVVAAARPFAGSIFTAAFISLY  465 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999998699999999999


No 32 
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00  E-value=3.2e-36  Score=216.15  Aligned_cols=374  Identities=14%  Similarity=0.115  Sum_probs=230.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99988657669999999999819998-89999-99999999999---999999999865082899999999999999985
Q gi|254780967|r   11 MAINSLGIDIILPCLPKISDSLHLSN-ENYGQ-HLISFYLIGYG---IAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus        11 ~~~~~~~~~~~~p~lp~i~~~l~~s~-~~~~~-~~~s~~~~~~~---i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      +.+......+|.-.-+.+.+.|=-+. ...+. ...+.|.+++.   +|.+++|.+.||+|||+++.+++.++++++++.
T Consensus        25 ~~lEwyDF~iYg~~A~~i~~~FFP~~~~~~~ll~tfa~favgf~~RPlGgivfG~lgDr~GRk~~L~~ti~lM~~~T~li  104 (490)
T PRK10642         25 NAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI  104 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             89999999999999999998619999946999999999999999885799999999985210999999999999999999


Q ss_pred             HCCCCHH--------HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC---CC--
Q ss_conf             1001101--------1100223210011111110001233210001111221223310001111111111222---21--
Q gi|254780967|r   86 VTINSFT--------GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT---VA--  152 (398)
Q Consensus        86 ~~a~~~~--------~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l---~~--  152 (398)
                      ++.|+|.        .+++.|++||++.|+.+..+.+++.|..|+++|+..-|+.+.+...|.+++..+...+   +.  
T Consensus       105 gllPtY~~IGi~ApilLvllRllQG~s~GGE~~ga~~~l~E~aP~~~RG~~~s~~~~g~~~G~llaa~~~~~l~~~l~~~  184 (490)
T PRK10642        105 GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA  184 (490)
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             87477998899999999999999888631427689999998589765020123898889999999999999999866987


Q ss_pred             --CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC----CCCC----CCCCCCCCCCCCCC-HHHHHHH-HHHHHH
Q ss_conf             --1111101456788888777788876167886402210----1111----11233310000000-0025677-788763
Q gi|254780967|r  153 --LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVR----PLNL----YAILHSFSLIFKHR-ASTLYNI-ANSLTM  220 (398)
Q Consensus       153 --~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~----~~~~----~~~~~~~~~~~~~~-~~~~~~~-~~~~~~  220 (398)
                        ..+|||.+|++.+++. +..++....++||+.-++.+    +.+.    +......++++++. +...... ......
T Consensus       185 ~~~~wGWRIPFlig~~l~-ligl~iR~~l~ESP~F~~~~e~~~~~~~~~~~~~~~~pl~e~~~~~~r~ll~~~gl~~~~~  263 (490)
T PRK10642        185 NFLDWGWRIPFFIALPLG-IIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATN  263 (490)
T ss_pred             HHHCCCHHHHHHHHHHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             762655299999999999-9999999808998768988877642100001346544499999984799999999999999


Q ss_pred             HCCHHHHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             1001468887654554315311015889-988657677889999985001565124688778889999999987325777
Q gi|254780967|r  221 GAILGFVNSSQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP  299 (398)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (398)
                      ..++.+..+.|.+..+..+.+...+... ....++..+..++.|+++||+|+|+....+.....+...-.....  ... 
T Consensus       264 ~~~Y~~~~y~ptyl~~~l~~s~~~~~~~~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P~f~ll--~~~-  340 (490)
T PRK10642        264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--NSN-  340 (490)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH--HCC-
T ss_conf             99999999999999980299877899999999999999999999999882648999999999999999999998--479-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q ss_conf             640379989989999999999999999985346-676999999999999999999999999983117--99999999999
Q gi|254780967|r  300 IHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT--YPITIGFFGIA  376 (398)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~  376 (398)
                       ..........+.++..+.......+...|.+| +.|.++.++...++...+...+.+..++.+.|.  +...+....++
T Consensus       341 -~~~~i~~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~gG~tP~I~t~Li~~Tg~~~~pa~Yl~~~a  419 (490)
T PRK10642        341 -VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTLAAWLVESSQNLMMPAYYLMVVA  419 (490)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             -6999999999999999999889999999868870677988799999999998999999999998799708999999999


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999999999422
Q gi|254780967|r  377 VSSFICILIVEKN  389 (398)
Q Consensus       377 ~~~~~~~~~~~~~  389 (398)
                      +++++..+..++.
T Consensus       420 ~i~lia~~~~~ET  432 (490)
T PRK10642        420 VIGLITGVTMKET  432 (490)
T ss_pred             HHHHHHHHHCCCC
T ss_conf             9999999956424


No 33 
>PRK09952 shikimate transporter; Provisional
Probab=100.00  E-value=1.8e-35  Score=212.00  Aligned_cols=377  Identities=15%  Similarity=0.121  Sum_probs=224.8

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHH-CCCHHHHHH-HHHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             999886576699999999-9981-999889999-999999999---9999999999986508289999999999999998
Q gi|254780967|r   11 MAINSLGIDIILPCLPKI-SDSL-HLSNENYGQ-HLISFYLIG---YGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus        11 ~~~~~~~~~~~~p~lp~i-~~~l-~~s~~~~~~-~~~s~~~~~---~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
                      ..+......+|.-..+.+ ++.| .-++...+. ...+.|.++   --+|.++.|+++||+|||+.+..++.++++++.+
T Consensus        31 ~~lE~yDf~iy~~~a~~i~~~~FFp~~~~~~~ll~~~~~fa~gfl~RPlGg~ifG~~gDr~GRk~~L~~si~~m~~~T~l  110 (438)
T PRK09952         31 AVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATAL  110 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             89999999999999999978724999990799999999999999987589999999997303399999999999999999


Q ss_pred             HHCCCCHHH--------HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC---C-
Q ss_conf             510011011--------1002232100111111100012332100011112212233100011111111112222---1-
Q gi|254780967|r   85 MVTINSFTG--------MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV---A-  152 (398)
Q Consensus        85 ~~~a~~~~~--------l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~---~-  152 (398)
                      +++.|++.+        +++.|++||++.|+.++.+.+++.|..|+|+|++..++.+.+..+|..++..+...+.   . 
T Consensus       111 ig~lPty~~IGi~ApilLv~~R~lQGl~~GGE~~~a~~~~~E~~p~~~Rg~~~s~~~~~~~~G~llas~~~~~l~~~l~~  190 (438)
T PRK09952        111 IGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTD  190 (438)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             99747689888899999999999978887612889999999968877732440499998899999999999999983688


Q ss_pred             ---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC-CCCCCCCCCCCC-CCHHHHHHHHHH-HHHHCCHHH
Q ss_conf             ---11111014567888887777888761678864022101111-112333100000-000025677788-763100146
Q gi|254780967|r  153 ---LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNL-YAILHSFSLIFK-HRASTLYNIANS-LTMGAILGF  226 (398)
Q Consensus       153 ---~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~  226 (398)
                         ..+|||.+|++.++.. +..++....+||++.-+++++++. ++.....++.++ +++......... ......+..
T Consensus       191 ~~~~~wGWRipFlig~l~~-li~l~iR~~l~Esp~f~~~~~~~~~~~~~~p~~e~~~~~~~~~l~~~~l~~~~~~~~y~~  269 (438)
T PRK09952        191 EQFLSWGWRIPFLFSIVLV-LIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIV  269 (438)
T ss_pred             HHHHHCCHHHHHHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8885314299999999999-999999982788878999876233443346699999986599999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf             8887654554315311015889-988657677889999985001565124688778889999999987325777640379
Q gi|254780967|r  227 VNSSQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIF  305 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (398)
                      ..+.+.+..+..+.+....... ........+...+.|++.||+|+||....+.....+...... ...... + ..+..
T Consensus       270 ~~~~~~y~~~~l~~~~~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~l~~~l~~~p~~-~~l~~~-~-~~~~~  346 (438)
T PRK09952        270 TAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFF-MALEAQ-S-IFWIV  346 (438)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHCC-C-HHHHH
T ss_conf             99999999987288899999999999999999999999999983634999999999999999999-998438-6-89999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q ss_conf             989989999999999999999985346-676999999999999-99999999999998311---7999999999999999
Q gi|254780967|r  306 IAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINT-VISTILGIIIGQSFNGT---TYPITIGFFGIAVSSF  380 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~-~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~  380 (398)
                      .....+.....+...+.......|.+| +.|.+..++...++. .+|...|.+..++.+.+   ..+..+....+++++.
T Consensus       347 ~~~~~l~~~~~~~~~~~~~~~l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L~~~~~~~~~~~a~y~~~~~~i~l  426 (438)
T PRK09952        347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA  426 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             99999999999999889999999868860557689999999999999999999999999768994799999999999999


Q ss_pred             HHHHHHHCCHH
Q ss_conf             99999942200
Q gi|254780967|r  381 ICILIVEKNQM  391 (398)
Q Consensus       381 ~~~~~~~~~~~  391 (398)
                      ++.+..+.+|+
T Consensus       427 ~~~l~~r~~~~  437 (438)
T PRK09952        427 MTALLMKDNQR  437 (438)
T ss_pred             HHHHHCCCCCC
T ss_conf             99998055579


No 34 
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00  E-value=1.4e-35  Score=212.70  Aligned_cols=373  Identities=13%  Similarity=0.144  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH--HHHHHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99988657669999999999819998899999--999999999---9999999999865082899999999999999985
Q gi|254780967|r   11 MAINSLGIDIILPCLPKISDSLHLSNENYGQH--LISFYLIGY---GIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus        11 ~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~--~~s~~~~~~---~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      +.+......+|.-.-|.+.+.|=-+++....+  ..+.|.+++   -+|.+++|++.||+|||+.+.+++.++++++.+.
T Consensus        31 ~~~E~yDf~iy~~~a~~i~~~FFp~~~~~~~ll~t~~~fa~gf~~RPlG~iifG~igDr~GRk~~l~~si~lm~i~T~li  110 (432)
T PRK10406         31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI  110 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf             79999999999999999999608999936999999999999999886699999998873010999999999999999999


Q ss_pred             HCCCCHHH--------HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC---CC--
Q ss_conf             10011011--------100223210011111110001233210001111221223310001111111111222---21--
Q gi|254780967|r   86 VTINSFTG--------MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT---VA--  152 (398)
Q Consensus        86 ~~a~~~~~--------l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l---~~--  152 (398)
                      ++.|++.+        ++++|++||++.|+.++.+.+++.|..|+++|+...++.+.+..+|..++..+...+   +.  
T Consensus       111 g~lPty~~IGi~ApilLvl~RllQG~~~GGE~~ga~~~l~E~ap~~rRG~~~s~~~~g~~~G~lla~~v~~~l~~~l~~~  190 (432)
T PRK10406        111 ACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA  190 (432)
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             94885888788999999999999998615758999999998477777135530999999999999999999997406822


Q ss_pred             --CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHCCHHHHHH
Q ss_conf             --111110145678888877778887616788640221011111123331000000000256777-88763100146888
Q gi|254780967|r  153 --LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIA-NSLTMGAILGFVNS  229 (398)
Q Consensus       153 --~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  229 (398)
                        ..+|||.+|++.+++.+ ..++....+||+.+.++++++ .   ....+.++++|+.....+. .......++.+..+
T Consensus       191 ~~~~wGWRipFlig~i~~l-i~l~lR~~l~Es~~~~~~~~~-~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~y~~~~~  265 (432)
T PRK10406        191 ELREWGWRIPFALGAVLAV-VALWLRRQLDETSQQETRALK-E---AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTY  265 (432)
T ss_pred             CCCCCHHHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHHCCC-C---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             2225109999999999999-999999727778267863045-5---5537999873599999999999999999999999


Q ss_pred             HHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             765455431531101-5889988657677889999985001565124688778889999999987325777640379989
Q gi|254780967|r  230 SQQIYVGIYQLGNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF  308 (398)
Q Consensus       230 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
                      .|.+..+..+.+... ............+...+.|++.||+|+|+..........+..... ........ ... .....
T Consensus       266 ~~t~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~G~LsDriGRr~~~~~~~~~~~~~~~p~-~~~l~~~~-~~~-~~~~l  342 (432)
T PRK10406        266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLFGALSDKIGRRTSMLCFGSLATIFTVPI-LSALQNVS-SPY-AAFGL  342 (432)
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHCCC-HHH-HHHHH
T ss_conf             9999987559988999999999999999999999999988473299999999999999999-99997387-599-99999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf             989999999999999999985346-676999999999999-999999999999983117--9999999999999999999
Q gi|254780967|r  309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINT-VISTILGIIIGQSFNGTT--YPITIGFFGIAVSSFICIL  384 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~-~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~  384 (398)
                      ........+...+.......|.+| +.|.++.++...+.. .+|.. .|.+......+.  ....+....++++++++.+
T Consensus       343 ~~~~~~~~~~~~~~~~~~~aElFPt~vR~tG~g~~Yni~~~l~GG~-aP~Ia~~L~~~g~~~~~~~Y~~~~a~i~~i~~l  421 (432)
T PRK10406        343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGS-AEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL  421 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999878999999986886055558879999999999999-999999999849973899999999999999999


Q ss_pred             HHHCCHHH
Q ss_conf             99422000
Q gi|254780967|r  385 IVEKNQMF  392 (398)
Q Consensus       385 ~~~~~~~~  392 (398)
                      ...|+.+-
T Consensus       422 ~l~r~~kg  429 (432)
T PRK10406        422 MLHRKGKG  429 (432)
T ss_pred             HHEECCCC
T ss_conf             84005699


No 35 
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00  E-value=2.9e-35  Score=210.91  Aligned_cols=362  Identities=11%  Similarity=0.124  Sum_probs=256.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC
Q ss_conf             65766999999999981999889999999999999999999999998650828999999999999999851001101110
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML   95 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~   95 (398)
                      -.++..-|.+|+|++|+|+|..+.| +..+...+.+++..++.++++||+|.||.+..++.+..++..+-.+++|.+.++
T Consensus        23 ~~itsv~Pll~~I~~dl~ls~~~~G-lLttlP~l~fgl~s~~a~~larR~G~~r~l~~al~ll~~G~~lR~~~~~~~~ll  101 (393)
T PRK09705         23 PLLTSVGPLLPQLRQASGMSFSVAA-LLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLL  101 (393)
T ss_pred             HHHHCCHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             4541305219999988199888999-999999999999988789999986808899999999999999998434389999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             02232100111111100012332100011112212233100011111111112222111111014567888887777888
Q gi|254780967|r   96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWY  175 (398)
Q Consensus        96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~  175 (398)
                      .++++.|+|.+...+...+++++++| +|.+.+++.++...+.|..++..+...+.+...+||......++..++..+..
T Consensus       102 ~gt~l~G~GIai~nvllP~~vk~~fP-~r~g~~tglY~~~m~~ga~l~~~l~~~l~~~~~~Wr~al~~wai~allal~~w  180 (393)
T PRK09705        102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAW  180 (393)
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999998998864410999997723-20589999999999999999999999999872778999999999999999999


Q ss_pred             HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             76167886402210111111233310000000002567778876310014688876545543153110158899886576
Q gi|254780967|r  176 YIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAM  255 (398)
Q Consensus       176 ~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (398)
                      +...++..+.+++       ......+.+|+|+.|...+..++....++++.++.|.+++|........+...+...+..
T Consensus       181 ~~~~~~~~~~~~~-------~~~~~~~~~rs~~aW~l~~ffglqS~~~Y~~~aWLP~il~~~G~s~~~AG~lls~~~~~~  253 (393)
T PRK09705        181 WWQSAREVASSHK-------TTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQ  253 (393)
T ss_pred             HHHHCCCCCCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             9971578777888-------887764411380799999999999999999999999999986999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Q ss_conf             77889999985001565124688778889999999987325777640379989989999999999999999985--3466
Q gi|254780967|r  256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME--PFSH  333 (398)
Q Consensus       256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  333 (398)
                      ..++++.+.+.+|.++|+...........  +...+... ..   ....  ....+.+.+.+..++........  ..|+
T Consensus       254 ~~~~l~~P~la~~~~~~~~l~~~~~~~~i--g~~gl~~~-p~---~~~~--~~~~l~Gig~G~~F~lal~l~~~rt~~~~  325 (393)
T PRK09705        254 AAGALLMPAMARHQDRRKLLMLALVLQLV--GFCGFIWL-PL---QLPV--LWAMVCGLGLGGAFPLCLLLALDHSVQPA  325 (393)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HHHHHHHH-HH---HHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             99999999997346740499999999999--99999998-87---7999--99999999877899999999987369988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             76999999999999999999999999983117-99999999999999999999942200034
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITIGFFGIAVSSFICILIVEKNQMFRK  394 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  394 (398)
                      .++.-++.....++..+++++.+.|.+.|.+. |...+............+-+..+.+.++|
T Consensus       326 ~a~~LSg~~Q~vGYllAalgP~~~G~l~d~tg~w~~~~~~l~~~~l~~~v~~~~~~p~~~~~  387 (393)
T PRK09705        326 IAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQ  387 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             99999999999989999999999999999829958999999999999999997359400389


No 36 
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00  E-value=5e-34  Score=204.07  Aligned_cols=379  Identities=14%  Similarity=0.120  Sum_probs=259.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--
Q ss_conf             999998865766999999999981999889999999999999999999999998650828999999999999999851--
Q gi|254780967|r    9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV--   86 (398)
Q Consensus         9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~--   86 (398)
                      .-..+..++..+..-++|.+.-|..-|+..++ ++.....+...+..++.|.++||++|||+++.+....++.....+  
T Consensus        24 ~~~~~S~lG~~~~~iAl~~~v~~~TgS~~~~g-lv~~~~~lp~ll~~~~~GvlaDR~~Rr~vmi~~~~~~~~~~~~l~~~  102 (416)
T PRK10489         24 LARFISIVSLGLLGVAVPVQIQMMTHSTWQVG-LSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN  102 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999998859999999-99999999999999999999994484299999999999999999999


Q ss_pred             ---CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             ---00110111002232100111111100012332100011112212233100011111111112222111111014567
Q gi|254780967|r   87 ---TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC  163 (398)
Q Consensus        87 ---~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~  163 (398)
                         -..++|.+++..++.|++.+...|..++++.|..|+|+..+++++.+...+++.++||.+|+.++. ..|..+.|.+
T Consensus       103 ~~~~~~~~~~l~~~~~l~g~~~a~~~pA~~a~lp~lV~~~~L~~Anal~~~~~~~~~iiGP~lgG~li~-~~g~~~~~~i  181 (416)
T PRK10489        103 ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLA-TGGVAWNYGL  181 (416)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHH
T ss_conf             981734099999999999999888889999999984478989999999999999998986488999998-7133499999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             88888777788876167886402210111111233310000000002567778876310014688876545543153110
Q gi|254780967|r  164 MGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL  243 (398)
Q Consensus       164 ~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (398)
                      .+...++..+ ....+|+..+++++++...++..+.++.+.++|......+...... .........|.+..+....+..
T Consensus       182 ~a~~~~~s~~-~l~~l~~~~~~~~~~~~~~~~~~eG~r~l~~~~~l~~~~l~~~~~~-~~~~~~~l~p~~~~~l~~~~~~  259 (416)
T PRK10489        182 AAAGTFITLL-PLLRLPALPPPPQPREHPLRSLLAGFRFLLASPLVGGIALLGGLLT-MASAVRVLYPALADNWQMSAAQ  259 (416)
T ss_pred             HHHHHHHHHH-HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCHHH
T ss_conf             9999999999-9971877899988887547899999999981779999999999999-9999999999999980898789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             15889988657677889999985001565124688778889999999987325777640379989989999999999999
Q gi|254780967|r  244 FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF  323 (398)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (398)
                      .+...+..+++..+++++.+++.++.++.+....+......   ......    ...+.+......++.+++.+......
T Consensus       260 ~G~l~aa~gvG~llG~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~G~~~~~~~v~~  332 (416)
T PRK10489        260 IGLLYAAIPLGAAIGALTSGWLAHSRRPGLLMLLSTLGSFL---AIGLFG----LMPMWILGVACLALFGWLSAISSLLQ  332 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH---HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999852456638999999999999---999998----61599999999999999999999999


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
Q ss_conf             9999853-4667699999999999999999999999998311799--9999999999999999999422000343069
Q gi|254780967|r  324 SSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYP--ITIGFFGIAVSSFICILIVEKNQMFRKTELR  398 (398)
Q Consensus       324 ~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~r  398 (398)
                      ++..++. ++|.+|+++++.......+..++..+.|.+.|.....  +...-....+.+.++.+...+-|.+|+.+.|
T Consensus       333 ~t~iQ~~~P~~~rGRV~s~~~~~~~~~~plG~~~~G~la~~~G~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~  410 (416)
T PRK10489        333 YTLLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLAIIGVLLLLVLGELRRFRQTPPQ  410 (416)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCC
T ss_conf             999998599998759999999999998998999999999997789999999999999999999977142037899989


No 37 
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00  E-value=3.1e-35  Score=210.72  Aligned_cols=375  Identities=17%  Similarity=0.220  Sum_probs=261.8

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             999999988657-6699999999998199988999999999999999999999999865082899999999999999985
Q gi|254780967|r    7 IAMLMAINSLGI-DIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         7 l~~~~~~~~~~~-~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      ++.......+.. .++.|.-|.|.+|+|+|+.|.+ ++.+...+.-++..++.|.+.||+|.|+....+.++..+-.+..
T Consensus        18 ~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~-ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~   96 (417)
T COG2223          18 LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKG-LLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGL   96 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999988654121488988899-99999998747899877753401284379999999999999999


Q ss_pred             HCCCCHH---HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC---CCH
Q ss_conf             1001101---1100223210011111110001233210001111221223310001111111111222211111---101
Q gi|254780967|r   86 VTINSFT---GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG---WIG  159 (398)
Q Consensus        86 ~~a~~~~---~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g---Wr~  159 (398)
                      +++.+.+   ++++.+.+.|++++.+. .+.+.++.+||||+++.++++.. ..++|..+...++-. +....+   ||.
T Consensus        97 ~~a~~~~~~~~ll~~gll~G~~GasFa-v~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~-v~~~~g~~~w~~  173 (417)
T COG2223          97 AFAVTYPSTWQLLVIGLLLGLAGASFA-VGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL-VAVAFGFLAWRN  173 (417)
T ss_pred             HHHCCCCCHHHHHHHHHHHHCCCCEEH-CCCCCCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf             997128756899999999701663000-02544211188544418988760-553019999998899-999972589999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             45678888877778887616788640221011111123-33100000000025677788763100146888765455431
Q gi|254780967|r  160 IFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAIL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY  238 (398)
Q Consensus       160 ~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (398)
                      .-.+..+..++..+..++..+|.+..+.    +.++.. .+++.+.++|+.|.+.+.+...++++..+....|.++++++
T Consensus       174 ~~~i~~~~l~v~~v~~~~~~~d~p~~r~----~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f  249 (417)
T COG2223         174 VAGIYVVALAIAAVLAWLGMNDVPEHRA----SVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF  249 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHC----CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999998476866523----555320057788863820699999999999999999999999999864


Q ss_pred             CCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             531101-5889988657677889999985001565124688778889999999987325777640379989989999999
Q gi|254780967|r  239 QLGNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFG  317 (398)
Q Consensus       239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (398)
                      +.+... +.......+...+...+.|+++||++.+|..........+.............+..........+.......+
T Consensus       250 g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G  329 (417)
T COG2223         250 GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG  329 (417)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             98723188999987889999985044443313534479999999999999997056344667643999999999999915


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCH
Q ss_conf             999999999985346676999999999999999999999999983117999999999---9999999999994220
Q gi|254780967|r  318 LINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFG---IAVSSFICILIVEKNQ  390 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  390 (398)
                      .-...........++++.|.+.++.+.++..+|...+...+...+.+.. ....+..   +.+++.......++++
T Consensus       330 ~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~-~~~~f~~~~~~~~~a~v~~~~~y~r~  404 (417)
T COG2223         330 LGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS-YTGAFMLLLAFYLVALVLTWALYARR  404 (417)
T ss_pred             CCCCHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             6763003313187786646788799885425665404899999984263-79999999999999999999999711


No 38 
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00  E-value=7.9e-34  Score=202.99  Aligned_cols=353  Identities=15%  Similarity=0.159  Sum_probs=204.4

Q ss_pred             HHHHHHHHHHHHHH--HHHH--HHHHHHHHHHHHH----CCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             38999999999988--6576--6999999999981----99988---999999999999999999999999865082899
Q gi|254780967|r    2 EFVIVIAMLMAINS--LGID--IILPCLPKISDSL----HLSNE---NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIV   70 (398)
Q Consensus         2 ~~i~~l~~~~~~~~--~~~~--~~~p~lp~i~~~l----~~s~~---~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~   70 (398)
                      +++..+....+++.  ++.|  ++..++|.+.+++    +.++.   ....+..+.+.+|..+|+++.|+++||+|||+.
T Consensus         8 ~~~~~~~~~a~lg~~~fGYd~~~is~~~~~~~~~~~~~~~~~~~~~~~~~g~i~s~~~iG~~iGal~~g~l~Dr~GRk~~   87 (486)
T PRK10077          8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSSRFGRRDS   87 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf             99999999999999999983716846899899984366678853057899999999999999999999999877455999


Q ss_pred             HHHHHHHHHHHHHHHH------------------CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf             9999999999999851------------------0011011100223210011111110001233210001111221223
Q gi|254780967|r   71 MMFGLVIHIISTFIMV------------------TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIA  132 (398)
Q Consensus        71 l~~g~~~~~i~~~~~~------------------~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~  132 (398)
                      +..+.+++.++.+..+                  .+++..+++++|+++|++.|...+....+++|..|++.|++..+..
T Consensus        88 l~~~~~~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~R~i~G~g~G~~~~~~p~yisE~ap~~~RG~~~~~~  167 (486)
T PRK10077         88 LKIAAVLFFISAVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFN  167 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             99999999999999876655555303125788888757999999999998559878889999999848786741475699


Q ss_pred             CCEECCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH-----HHCC----------
Q ss_conf             31000111111111122221-------1111101456788888777788876167886402-----2101----------
Q gi|254780967|r  133 MMIFMIMPILAPSIGQATVA-------LSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR-----DVRP----------  190 (398)
Q Consensus       133 ~~~~~~g~~igp~ig~~l~~-------~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~-----~~~~----------  190 (398)
                      +....+|..++..++-.+..       ...+||++|.+..+.+++..+ ..+++||+++--     +++.          
T Consensus       168 ~~~~~~G~l~~~~v~~~~~~~~~~~~~~~~~WR~~~~~~~ipa~~~~~-~~~~lPESPrwL~~kgr~eeA~~~l~~l~~~  246 (486)
T PRK10077        168 QFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASECIPALLFLM-LLYFVPESPRWLMSRGKQEQAESILRKIMGN  246 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHCCCHHHHHHHHHHHHCC
T ss_conf             999999999999999998607872125773389999989999999999-9996786709999869999999999998398


Q ss_pred             CCCCCCC-----------CCCCCCCCCCH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH-HHHHHHHHH
Q ss_conf             1111123-----------33100000000---02567778876310014688876545543153110158-899886576
Q gi|254780967|r  191 LNLYAIL-----------HSFSLIFKHRA---STLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPI-AFAVGGFAM  255 (398)
Q Consensus       191 ~~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  255 (398)
                      .+.++..           +..++.++.+.   .....+.......+......+.|.++.+.. .+...+. .....++..
T Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~q~~Gi~~i~~y~~~i~~~~g-~~~~~~~~~~~~~~~~~  325 (486)
T PRK10077        247 TLATQALQEIKHSLDHGRKTGGRLLMFGVGVIVIGVLLSVFQQFVGINVVLYYAPEIFKTLG-ASTDIALLQTIIVGVIN  325 (486)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHH
T ss_conf             30789999999999998875447775142999999999999999815459963999999839-98746999999999988


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf             77889999985001565124688778889999999987325777640379989989999999999999999985346-67
Q gi|254780967|r  256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HL  334 (398)
Q Consensus       256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  334 (398)
                      .++..+...+.||+|||+....+.....+........... .............+...+..+ ..|....+..|.+| +.
T Consensus       326 ~~~~~~~~~lvdr~GRR~lli~g~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~~-~gp~~~~~~sEifPt~i  403 (486)
T PRK10077        326 LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFAMS-WGPVCWVLLSEIFPNAI  403 (486)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHH
T ss_conf             7799999998725387799999999999999999999885-314189999999999999987-98998842384166607


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             699999999999999999999999
Q gi|254780967|r  335 AGTASSIFGFINTVISTILGIIIG  358 (398)
Q Consensus       335 ~G~a~~l~~~~~~~~~~~~~~~~g  358 (398)
                      |+++.++....+...+.+.+....
T Consensus       404 R~~g~~i~~~~~~~~~~iv~~~~p  427 (486)
T PRK10077        404 RGKALAIAVAAQWIANYFVSWTFP  427 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999


No 39 
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00  E-value=5.2e-34  Score=203.98  Aligned_cols=362  Identities=15%  Similarity=0.130  Sum_probs=232.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999886576699999999998199988999999999999999999999999865082899999999999999985
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      .+..-..+..++.....|.+|...++.|.|+.+.| +..|.|.+|+.++.++.+++.||+|+||++..+..+..++.+.+
T Consensus        10 ~L~~~~~l~~l~~Gl~~pll~l~l~~~G~s~~~iG-l~~s~~~~G~llg~~~~~~li~r~G~~r~~~~~~~l~a~~~l~~   88 (381)
T PRK03633         10 LLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVG-MVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASLIFAAGCVGL   88 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999888999999998699878999-99999999999999877999998188999999999999999999


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                      .+.+|++...+.|++.|++.+..+....++++|..|+|+|+|.+++++.....|..+||.+.+. .+.  .....|.+.+
T Consensus        89 ~l~~~~~~W~~lR~l~G~~~a~~~v~~EsWln~~a~~~~RGrv~~iY~~~~~~g~~~Gp~ll~~-~~~--~~~~~f~~~~  165 (381)
T PRK03633         89 GLMVGFWSWLGWRFLAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK-VST--ELMSVLPWVT  165 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCC--CHHHHHHHHH
T ss_conf             9881299999999999999999999999998544973335899999999999999999999841-670--0678999999


Q ss_pred             HHHHHHHHHHHH-HCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHH---HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             888777788876-16788640221011111123331000000000---25677788763100146888765455431531
Q gi|254780967|r  166 VITTFITLWYYI-RFPETLDPRDVRPLNLYAILHSFSLIFKHRAS---TLYNIANSLTMGAILGFVNSSQQIYVGIYQLG  241 (398)
Q Consensus       166 ~~~~~~~~~~~~-~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (398)
                      .+.....+...+ ..+++ +++++++.       +.++.++.|..   ....+..++..+.   +.+..|.+..+.....
T Consensus       166 ~l~~~alipi~~~~~~~p-~~~~~~~~-------~~~~l~~~~~ap~~~~~~~~~G~~~~~---~~sl~Pvy~~~~Gls~  234 (381)
T PRK03633        166 GLVLAGILPLLFTRVLNQ-QAENHDST-------SIWPMLKLRQARLGVNGCIISGIVLGS---LYGLMPLYLNHQGMSN  234 (381)
T ss_pred             HHHHHHHHHHHHCCCCCC-CCCCCCCC-------CHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCCH
T ss_conf             999999999996378899-98887777-------789898850258999999999999999---9988899999849988


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             10158899886576778899999850015651246887788899999999873257776403799899899999999999
Q gi|254780967|r  242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS  321 (398)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (398)
                      .+.+...+...++..+.++..||++||++||+.............  .....   .    ..... ..++.+......++
T Consensus       235 ~~ia~~~~~~~~Gg~l~Q~PiG~LSDr~dRr~vl~~~~~~~~~~~--~~~~~---~----~~~~~-~lf~~G~~~~~lY~  304 (381)
T PRK03633        235 ASIGFWMAVLVSAGILGQWPMGRLADRFGRLLVLRVQVFVVILGS--IAMLS---Q----AAMAP-ALFILGAAGFTLYP  304 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH--HHHHH---H----HHHHH-HHHHHHHHHHHHHH
T ss_conf             899999999999999998245999887372999999999999999--99998---8----99999-99999999854799


Q ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             9999998534-667699999999999999999999999998311799999999999999999999942200034
Q gi|254780967|r  322 NFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRK  394 (398)
Q Consensus       322 ~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  394 (398)
                      ...+...|.. |++...+++........++.+++.+.|...|.....  ..+..++...++.+....|++.+++
T Consensus       305 l~lA~~~d~~~~~~~v~a~a~~~~~~~~Gsi~GP~~ag~~M~~~G~~--~lf~~~a~~~l~~~~~~~r~~~~~p  376 (381)
T PRK03633        305 VAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDN--LLFIMIASVSFIYLLMLLRNAGHTP  376 (381)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999866277888999999999999819887289999999985812--8999999999999999999726899


No 40 
>KOG2532 consensus
Probab=100.00  E-value=2.7e-35  Score=211.11  Aligned_cols=345  Identities=17%  Similarity=0.202  Sum_probs=249.8

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC--CHHHHCCCCCCCCCCCC
Q ss_conf             9981999889999999999999999999999998650828999999999999999851001--10111002232100111
Q gi|254780967|r   29 SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN--SFTGMLCMRLIQGIGGA  106 (398)
Q Consensus        29 ~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~--~~~~l~~~r~l~G~g~~  106 (398)
                      +.+++.|..+.+ ++.+.++.|+.+++++.|.+.||+|-|+++..+.++.++.+++...+.  +++.+++.|++||++.+
T Consensus        65 ~~~~~ws~~~k~-~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g  143 (466)
T KOG2532          65 AGEYDWSSTEKG-LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG  143 (466)
T ss_pred             CCEECCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH
T ss_conf             641135855434-7648999999999823799998918538899999999999999999998262287899997104676


Q ss_pred             CCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             11110001233210001111221223310001111111111222211111101456788888777788876167886402
Q gi|254780967|r  107 APRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR  186 (398)
Q Consensus       107 ~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~  186 (398)
                      ...|....+.++|.|++||++..+....+..+|.+++-++++.+.+...||+++|++.+.++++..++.+....|++.++
T Consensus       144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h  223 (466)
T KOG2532         144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH  223 (466)
T ss_pred             HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf             66440310201058888899999999999899899988648998625769877999987998988776555314883427


Q ss_pred             H------HC---CC-CCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHH
Q ss_conf             2------10---11-1111----2333100000000025677788763100146888765455431531-1015889988
Q gi|254780967|r  187 D------VR---PL-NLYA----ILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVG  251 (398)
Q Consensus       187 ~------~~---~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  251 (398)
                      +      .+   +. ..++    ..-.++++++++.+|...+.......+++.+..+.|.++.+..+.+ +..+...++.
T Consensus       224 ~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP  303 (466)
T KOG2532         224 PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP  303 (466)
T ss_pred             CCCCHHHHHHHHHCCCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             97689999999827440003788999989997084999999999998899999999771999973287854546998769


Q ss_pred             HHHHHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             657677889999985001565------12468877888999999998732577764037998998999999999999999
Q gi|254780967|r  252 GFAMSIASFINSRLVEKFGIR------RVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS  325 (398)
Q Consensus       252 ~~~~~~~~~~~~~l~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                      .+.+.+..++.+.+.||...|      +...............+...........  ......+.+.....+...+....
T Consensus       304 ~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~--~~a~~~l~~~~~~~g~~~~Gf~~  381 (466)
T KOG2532         304 FLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR--LLAVILLTIAIGLSGFNISGFYK  381 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--HHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             9999999999999988987536865799999998889999998765300588751--58999999999986401110344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf             998534667699999999999999999999999998-311799999999999
Q gi|254780967|r  326 ISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF-NGTTYPITIGFFGIA  376 (398)
Q Consensus       326 ~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~  376 (398)
                      ...+..|++++...++.++.....+.+.+.+++.+. |++...+...+...+
T Consensus       382 ~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a  433 (466)
T KOG2532         382 NHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAA  433 (466)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH
T ss_conf             2021026679999999999999999888782013507999799999999999


No 41 
>KOG1330 consensus
Probab=100.00  E-value=3.2e-37  Score=221.69  Aligned_cols=354  Identities=18%  Similarity=0.204  Sum_probs=226.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999886576699999999998199988999999999999999999999999865082899999999999999985
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      ++.+...++...-..+.-.+++++++||+++...| ++.+.|.+.+.+..|++|.++|||+||+++.+|..++.++.+.+
T Consensus        37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~G-ll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~  115 (493)
T KOG1330          37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELG-LLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFAS  115 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
T ss_conf             99999999874341200156778876088902056-01489999999999889988764274158755889999999998


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                      +++..||++.++|.+.|+|++...|.++.+++|.+|+++|++.+++.+.+..+|..+|-..|+.+-...+.||+.|+..+
T Consensus       116 ~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~a  195 (493)
T KOG1330         116 GFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSA  195 (493)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEH
T ss_conf             88999999999998842405441102026766407602566778875421013564147740154157663689887400


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHCCCC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             888777788876167886402210111-------1112333100000000025677788763100146888765455431
Q gi|254780967|r  166 VITTFITLWYYIRFPETLDPRDVRPLN-------LYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY  238 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pet~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (398)
                      ++++++.++..++.+|+++.++++..+       ..+.+++.+.+.++|.+....+...-..+..-++-++.|......+
T Consensus       196 vl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~  275 (493)
T KOG1330         196 VLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSY  275 (493)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             89999999987503574223210123677677885226788999870670130058999998830643234566788899


Q ss_pred             ---CCCCCHHHHH-HHHHHHHH----HHHHHHHHHHHCCCCCCHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             ---5311015889-98865767----788999998500156512468877---888999999998732577764037998
Q gi|254780967|r  239 ---QLGNLFPIAF-AVGGFAMS----IASFINSRLVEKFGIRRVSHYSLL---IFFMITGSWLLVQITSNHPIHLLIFIA  307 (398)
Q Consensus       239 ---~~~~~~~~~~-~~~~~~~~----~~~~~~~~l~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (398)
                         +.+...++.+ ++...+..    .|+.+.+++.+++.+....+....   ........++.+...  .+.....+..
T Consensus       276 ~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~--~~~~s~~~~~  353 (493)
T KOG1330         276 ELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA--FTSSSMIFGL  353 (493)
T ss_pred             HHHCCCCCCCHHHHHHHHHHCHHHHEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_conf             87077644222555689860524402127888888874266430547789876114589999999986--1148899999


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q ss_conf             99899999999999999-99985-34667699999999999999999999-9999983
Q gi|254780967|r  308 FFFLASFQFGLINSNFS-SISME-PFSHLAGTASSIFGFINTVISTILGI-IIGQSFN  362 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~-~~g~~~~  362 (398)
                      .++..+..........+ ....+ .+|++|-++.++...+....|...+| ++|.+.|
T Consensus       354 il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd  411 (493)
T KOG1330         354 ILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD  411 (493)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHH
T ss_conf             9999999998616556643136862755320899999999998324888614046788


No 42 
>PRK10133 L-fucose transporter; Provisional
Probab=100.00  E-value=2.9e-33  Score=199.84  Aligned_cols=350  Identities=15%  Similarity=0.133  Sum_probs=256.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998899999999999999999999999986508289999999999999998
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~   84 (398)
                      +++..+.++-.+.+++-.|..|..++.|++|+.|.. ++..+|+.+|.+.+++.|.+.||+|.|+.++.|+.++++|+++
T Consensus        29 ~lv~~LFF~wGf~t~l~~~Li~~fk~~f~Ls~~qa~-lv~~aff~aY~v~siPag~li~r~GyK~~ii~GL~l~a~G~ll  107 (438)
T PRK10133         29 ALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAG-LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAAL  107 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999987677899999999096899998-9999999999999988999999975399999999999999999


Q ss_pred             H---HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-------
Q ss_conf             5---100110111002232100111111100012332100011112212233100011111111112222111-------
Q gi|254780967|r   85 M---VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-------  154 (398)
Q Consensus        85 ~---~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-------  154 (398)
                      +   +...+|+.++++-++.|.|.+...+.++.+++..-|+|+..+.+.+.+..+++|..++|.+++.++-..       
T Consensus       108 F~paa~~~sy~~fL~alFvig~Gla~LQtaaNPyi~~lG~~e~a~~RLnlaq~fN~lGt~i~pll~~~li~~~~~~~~~~  187 (438)
T PRK10133        108 FWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQD  187 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             99998872699999999999971999998088999997895239999999999787899999999999995577510167


Q ss_pred             ------------------CCCCHHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             ------------------1110145678888877778-887616788640221011111123331000000000256777
Q gi|254780967|r  155 ------------------GGWIGIFVCMGVITTFITL-WYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIA  215 (398)
Q Consensus       155 ------------------~gWr~~f~~~~~~~~~~~~-~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (398)
                                        ..|+++|+..+...++..+ .....+||..++++ ++.+..+..+..++++++|+++...+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~v~~pYl~ia~~~~~lal~~~~~~lP~i~~~~~-~~~~~~~~~~~~~~l~~~~~~~lgv~a  266 (438)
T PRK10133        188 VLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH-SDAKQGSFSASLSRLARIRHWRWAVLA  266 (438)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCHHHHHHHHHCHHHHHHHHH
T ss_conf             7863489889888777899999999999999999999999934998887642-100023302447887404299999999


Q ss_pred             HHHHHHCCHHHHHHHHHHHHH-HCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             887631001468887654554-3153110-15889988657677889999985001565124688778889999999987
Q gi|254780967|r  216 NSLTMGAILGFVNSSQQIYVG-IYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ  293 (398)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~  293 (398)
                      .++..+...+.-++...+..+ ..+.+.. .+...+....++.+|.++...+.+|+.+++........    ...+.+..
T Consensus       267 iF~YVGaEV~i~s~~i~y~~~~~~g~~~~~a~~~~s~~~~~~~vGRfig~~ll~~~~~~~~L~~~a~~----~iil~l~a  342 (438)
T PRK10133        267 QFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI----AMALCLIS  342 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH----HHHHHHHH
T ss_conf             99999999999999999998724898677899999999999999999999998257899999999999----99999999


Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             325777640379989989999999999999999985346676999999999999999999999999983117
Q gi|254780967|r  294 ITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT  365 (398)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~  365 (398)
                      .....    ......+...++..+.++|...+++.+..+++.++++++. .....||++.+++.|.+.|...
T Consensus       343 ~~~~g----~~~~~al~lvg~f~Sim~PtIFsLal~gLG~~t~~~S~iL-vm~IvGGAilP~l~G~laD~~G  409 (438)
T PRK10133        343 AFAGG----HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFI-VMTIIGGGIVTPVMGFVSDAAG  409 (438)
T ss_pred             HHCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_conf             98288----6999999999999888899999999673421121279999-9999732889999999998528


No 43 
>TIGR00898 2A0119 cation transport protein; InterPro: IPR004749 Organic cation transport proteins belong to this group. The protein from human is a sodium-dependent, high affinity carnitine transporter that also transports organic cations without the involvement of sodium. It is involved in the active cellular uptake of carnitine.; GO: 0015075 ion transmembrane transporter activity, 0006811 ion transport, 0016021 integral to membrane.
Probab=100.00  E-value=9.7e-34  Score=202.51  Aligned_cols=364  Identities=16%  Similarity=0.133  Sum_probs=245.6

Q ss_pred             HHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf             99999998199988--9999999999999999999999998650828999999999999999851001101110022321
Q gi|254780967|r   24 CLPKISDSLHLSNE--NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ  101 (398)
Q Consensus        24 ~lp~i~~~l~~s~~--~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~  101 (398)
                      ..+.|..|+++.-+  ....+..|.+++|..+|+.++|.+|||||||++++++.+..++...+.++||||+++.+.|+++
T Consensus       124 ~~stiv~EW~LvC~~~~~~~L~~s~~~~G~L~Gs~~~G~lsDrfGRk~~L~~s~l~~~~~g~~~a~SP~~~~~~vfR~L~  203 (557)
T TIGR00898       124 FSSTIVTEWDLVCEDAWKVDLTQSLFFVGVLLGSLVLGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV  203 (557)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             48735885274300257766889999999998688887786352048999999999988786512756899999999996


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             001111111000123321000111122122-3310001111111111222211111101456788888777788876167
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSI-AMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFP  180 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~-~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~p  180 (398)
                      |++.++..+.+..+..|+.|.+.|.+.--. +...+++|.++=|.++ +.+.+. |||+.....++..++..++..+++|
T Consensus       204 G~~~~g~~~~~~~L~~E~~~~~~R~~~~~lG~~~~~~~G~~~L~l~A-Y~~~~S-gWR~L~l~~s~P~~~~~~~~rw~vp  281 (557)
T TIGR00898       204 GMGIAGIWVVAVVLNTEFLPKKQRAIVGILGIQVFFSLGLLLLPLVA-YFIPDS-GWRWLQLAVSLPLFIFLLLSRWFVP  281 (557)
T ss_pred             HHHHCCEEEEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHH-HHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             13100202577776775327366157661035888887699987788-653785-5899999999889999999877710


Q ss_pred             CCCCH-------------------HH-------------------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             88640-------------------22-------------------10111111233310000000002567778876310
Q gi|254780967|r  181 ETLDP-------------------RD-------------------VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGA  222 (398)
Q Consensus       181 et~~~-------------------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (398)
                      |+++-                   .+                   ++..+.|+...+..++++.|..+...++..+....
T Consensus       282 ESpRWL~~~gr~~~A~~~L~~~A~~Ng~~~eg~~~~~~~~~~~~~~~~~~~k~~~~~~~~L~rtp~lr~~tl~l~~~Wf~  361 (557)
T TIGR00898       282 ESPRWLISQGRIEEALKILQRVAKINGKKEEGGKLPAEVLSLSLEKELSSKKAQKPSFLDLFRTPQLRKTTLILMMLWFT  361 (557)
T ss_pred             CCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             13125642485789999999985337861553326603330025666542200143215540687899999999999999


Q ss_pred             -CHHHHHHHHHHHHHHCCCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             -0146888765455431531----------------------10158899886576778899999850015651246887
Q gi|254780967|r  223 -ILGFVNSSQQIYVGIYQLG----------------------NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSL  279 (398)
Q Consensus       223 -~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~  279 (398)
                       -+.|...  .+..+..+.+                      ...-+.....+..-..+.++.-.+.||+|||+......
T Consensus       362 ~~f~YyGL--~l~~~~l~~n~D~C~~~~~~~~~~~~~C~~L~~~~Y~~~~~~glve~Pa~~~~~l~i~~LgRr~~~a~~~  439 (557)
T TIGR00898       362 TAFSYYGL--VLDLENLGGNGDVCSISLFKKAVEAKVCEYLSKEIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASL  439 (557)
T ss_pred             HHHHHHHH--HHHHHCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             88999877--7532114787440023100044100222110089999999999988899998898876217767999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             788899999999873257776403799899899999999999999999853466-7699999999999999999999999
Q gi|254780967|r  280 LIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSH-LAGTASSIFGFINTVISTILGIIIG  358 (398)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~a~~l~~~~~~~~~~~~~~~~g  358 (398)
                      ...........++...... .+-.......+++-.+....+.....+..|.+|. .|.++.++.+.+.-+|+.+ .|.+.
T Consensus       440 ~~ag~~~l~~~~~~~~~~~-~~G~l~t~L~~~g~~~~~~aF~~~ylyt~ELYPT~~Rn~G~g~~S~m~r~G~i~-~P~~~  517 (557)
T TIGR00898       440 LLAGVALLLLLFVPEELYF-YNGWLRTALAVLGKAGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII-SPFLV  517 (557)
T ss_pred             HHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf             9999999999986312355-306999999999999888872542220565015899999999999999875799-99999


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             9-9831179999999999999999999994220003
Q gi|254780967|r  359 Q-SFNGTTYPITIGFFGIAVSSFICILIVEKNQMFR  393 (398)
Q Consensus       359 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  393 (398)
                      . ..+.........|..+.+.+....++++..+..+
T Consensus       518 ~~~~~~~~~lP~~~fG~~~~l~~~~~l~LPEt~g~~  553 (557)
T TIGR00898       518 YRLGEVWLFLPLVIFGVLALLAGILTLLLPETKGVP  553 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             998554454589999999999999988521016888


No 44 
>TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736   Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated .   The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified .   Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9  prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.   This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=100.00  E-value=2.8e-33  Score=200.01  Aligned_cols=326  Identities=14%  Similarity=0.121  Sum_probs=213.0

Q ss_pred             CHHHHH-HHHHHHHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH--------HCCCCCCCC
Q ss_conf             988999-99999999999---999999999986508289999999999999998510011011--------100223210
Q gi|254780967|r   35 SNENYG-QHLISFYLIGY---GIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTG--------MLCMRLIQG  102 (398)
Q Consensus        35 s~~~~~-~~~~s~~~~~~---~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~--------l~~~r~l~G  102 (398)
                      +|+.++ ..+.+.|.+++   -+|..++|.+.||+||||.+++++.+++++++..++-|||..        |+++|++||
T Consensus        28 ~dp~~~~~~~~atFa~gFl~RP~Gg~~FG~~GDr~GRk~~L~~tl~~Mg~~T~~IGLlPsY~~IG~~APiLL~~~Rl~QG  107 (413)
T TIGR00883        28 GDPLVALLATFATFAVGFLARPLGGIVFGHFGDRIGRKKTLVITLLMMGIGTVLIGLLPSYATIGIWAPILLLLARLIQG  107 (413)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             88278999999999999999889999998863235469999999999857665312247601177899999999999843


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCC--------CCC-CCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             011111110001233210001111221223310001111111111--------222-21111110145678888877778
Q gi|254780967|r  103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIG--------QAT-VALSGGWIGIFVCMGVITTFITL  173 (398)
Q Consensus       103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig--------~~l-~~~~~gWr~~f~~~~~~~~~~~~  173 (398)
                      ++.|+.+..+..++.|..|++||+-.-|+.+.+..+|.+++....        .-- + ..||||-+|....++ .+..+
T Consensus       108 fs~GGE~gGaa~~~~E~A~~gkRG~~gSf~~~g~~~G~llA~l~~~~~s~~~~~~~P~-~~WGWRiPFl~s~~l-~~~gL  185 (413)
T TIGR00883       108 FSLGGEWGGAALYLVESAPPGKRGFYGSFQQVGAPVGLLLAALVVLLLSYLLGDEAPL-LEWGWRIPFLVSAVL-VLIGL  185 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHCCCHHHHHHHHHH-HHHHH
T ss_conf             5678999999999997500220378888999867899999999999999972665203-310314589999999-99999


Q ss_pred             HHHHHCCCCCCHHHHCCCCCC---CCCCCCCCCCCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC---------
Q ss_conf             887616788640221011111---12333100000000--0256777887631001468887654554315---------
Q gi|254780967|r  174 WYYIRFPETLDPRDVRPLNLY---AILHSFSLIFKHRA--STLYNIANSLTMGAILGFVNSSQQIYVGIYQ---------  239 (398)
Q Consensus       174 ~~~~~~pet~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  239 (398)
                      .+...++||+.-+++++.+.+   +..-..+++++++.  ++............++....+.+.+.++..+         
T Consensus       186 ~lR~~L~Et~~f~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~fY~~t~y~~~Y~~~~~~vsEAGYA~G  265 (413)
T TIGR00883       186 YLRRNLEETPVFEKAQEKHKTRTGKKRIPLAELLTKHRKAFLLVLGLVIATTTTFYLITTYLPTYLTTTLGVSEAGYALG  265 (413)
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             98165645779999885212530376740999987222999999999999899999999999998865167514568773


Q ss_pred             --CCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             --3110-1588998865767788999998500156512468877888999999998732577764037998998999999
Q gi|254780967|r  240 --LGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQF  316 (398)
Q Consensus       240 --~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (398)
                        .++. .........+...+...+.|+++||+|||+..........+. ....+..+....-...............-.
T Consensus       266 Lg~~~~~~~~~~~~~~i~~~~~~P~~G~LsDriGRR~~~i~~~~~~~~~-~~p~l~~l~~~~y~~~~~~~~~~~~~~~i~  344 (413)
T TIGR00883       266 LGLSANSALLVLMLSLILFFVVIPLSGALSDRIGRRRVLIIFTVLAALL-AVPLLMALLDSGYSPFTLVFFLLLGLALIG  344 (413)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             2687668999999999999999999999975536539999999999999-999999874178768999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             9999999999985346-67699999999999-99999999999999831
Q gi|254780967|r  317 GLINSNFSSISMEPFS-HLAGTASSIFGFIN-TVISTILGIIIGQSFNG  363 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~-~~~~~~~~~~~g~~~~~  363 (398)
                      ...+....+...|.+| |.|.+..|+-..+. -++|...+.+...+...
T Consensus       345 ~~~~g~~~~~~~ElFPt~vR~~G~~l~y~~A~~~~GG~aP~iA~~L~~~  393 (413)
T TIGR00883       345 GMYTGPMGSLLPELFPTEVRYTGASLAYNLAGAIGGGLAPYIAAALVAI  393 (413)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9878769998772334407899887999999998656899999999972


No 45 
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter; InterPro: IPR004745 Na(+)-dependent inorganic phosphate cotransporter proteins belong to this group. The mammalian proteins are important for the resorption of phosphate by the kidney and may be involved in actively transporting phosphate into cells via sodium ion cotransport in the renal brush border membrane.; GO: 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=100.00  E-value=3.5e-33  Score=199.43  Aligned_cols=354  Identities=15%  Similarity=0.193  Sum_probs=253.8

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC--CCHHH-HCCCCCCC
Q ss_conf             9999998199988999999999999999999999999865082899999999999999985100--11011-10022321
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI--NSFTG-MLCMRLIQ  101 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a--~~~~~-l~~~r~l~  101 (398)
                      +|.-.++|+-|..++| .+.|.++.|+.+.|++.|+++||||.|+++-.+..+..+.+++...+  .+..+ +++.|++|
T Consensus        80 ipy~~~~f~Ws~~~QG-~ilSS~fyG~~~~qiP~G~la~~Y~~k~~iG~~~~~~~v~~~liP~aA~~g~~~G~~~~Rv~q  158 (514)
T TIGR00894        80 IPYKNPEFNWSEDQQG-LILSSFFYGSVIIQIPVGYLAGKYGTKKVIGFALLLSSVLSFLIPIAAGVGFAWGVIVLRVLQ  158 (514)
T ss_pred             CCCCCCCCCCCHHHHH-HHHHHHHHHEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH
T ss_conf             6668888478677636-887566661252341603563140437999999999999998746554121011023453212


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             00111111100012332100011112212233100011111111112222111-----1110145678888877778887
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-----GGWIGIFVCMGVITTFITLWYY  176 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-----~gWr~~f~~~~~~~~~~~~~~~  176 (398)
                      |++.|...|....+...|.||+||+|..|...++..+|+.+.-+++|.+.+..     .||.++||+.++++.++.++..
T Consensus       159 G~~~G~~~p~~h~l~~KW~PP~ER~r~~s~~~sG~~~G~~i~lp~~G~i~~~~GskF~~GWP~vFYifGivG~~~~~~W~  238 (514)
T TIGR00894       159 GIGQGLVSPAQHELLAKWIPPNERSRLTSAVLSGFQLGTFIVLPISGLICESDGSKFLLGWPMVFYIFGIVGTAVSIAWF  238 (514)
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             01233114643022663058875057999986268898999986304555356740147761467788999999999989


Q ss_pred             HHC---CCCCCHHHH--------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf             616---788640221--------------011111123331000000000256777887631001468887654554315
Q gi|254780967|r  177 IRF---PETLDPRDV--------------RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ  239 (398)
Q Consensus       177 ~~~---pet~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (398)
                      ++.   |+++|.-+.              ..++.++.--.+|.++|++.+|...++...............|.++.+.++
T Consensus       239 ~l~~D~P~~HP~is~~Ek~YI~~sL~~~~~~krn~r~~~P~KAi~kS~P~W~~~~a~~~~~w~~~~l~~~~P~f~~~~L~  318 (514)
T TIGR00894       239 VLVYDDPSDHPCISESEKKYINSSLVQQVSSKRNSRQSLPIKAILKSLPVWAIVFASFGHIWGLNTLMTYLPTFISSVLH  318 (514)
T ss_pred             HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             87313754574233578999988777520122257898844565654599999999875330789999977799988734


Q ss_pred             CC-CCHHHHHHHHHHHHHH----HHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             31-1015889988657677----8899999850015-----651246887788899999999873257776403799899
Q gi|254780967|r  240 LG-NLFPIAFAVGGFAMSI----ASFINSRLVEKFG-----IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF  309 (398)
Q Consensus       240 ~~-~~~~~~~~~~~~~~~~----~~~~~~~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
                      .+ ...|++-++..+...+    .+.+++++..+-.     .||+..   .+.....+.+.+......+.......+++.
T Consensus       319 ~~~~~nGlLSsLPyL~~~l~~~~~~~~AD~l~~~~~ls~t~~RKl~t---~ig~~~~~~~~~al~Y~snl~~~~~~i~~L  395 (514)
T TIGR00894       319 VNIRENGLLSSLPYLLAWLCGVLASQLADYLLSRKILSLTAVRKLFT---FIGLLGPGIFVVALPYLSNLYNAYSTIIIL  395 (514)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             65312540436799999999999998758987146502677889999---999888999999999886898999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHH
Q ss_conf             8999999999999999998534667699999999999999999999999998311-7---99999999999999999
Q gi|254780967|r  310 FLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT-T---YPITIGFFGIAVSSFIC  382 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-~---~~~~~~~~~~~~~~~~~  382 (398)
                      .+.....+...+-.....+|..|+..|...|+-+.++..+|.+.+.++|.+..+. .   ..+...|...+.+.+.+
T Consensus       396 ~lA~~~~g~~~~G~lin~lDLaP~y~Gf~~g~~~~~g~~~Gl~~~~~~G~~l~~~~~pv~~~W~~vF~l~a~~~~~~  472 (514)
T TIGR00894       396 TLANALAGFVLSGVLINALDLAPRYAGFIKGVTTLIGSLGGLISSTLAGQLLSQDSKPVISAWKKVFLLMAFVNVIS  472 (514)
T ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99876300100007888876225789999999999987887899999998624889404777799999999999987


No 46 
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=100.00  E-value=4.2e-31  Score=187.95  Aligned_cols=375  Identities=13%  Similarity=0.049  Sum_probs=267.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC-
Q ss_conf             9999988657669999999999819998899999999999999999999999986508289999999999999998510-
Q gi|254780967|r    9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT-   87 (398)
Q Consensus         9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~-   87 (398)
                      .-..+..++.-|-..+.+.+..|+.-|+..++ ++.+..++...+..++.|.++||++|||+++.+.....+.....+. 
T Consensus        17 ~a~lvS~~Gtwmq~VA~~Wlv~~lT~S~~~vg-lV~~a~~LP~~ll~l~aGvlADr~dRRr~ll~~q~~~~~~a~~La~l   95 (524)
T pfam05977        17 IASLVSNLGWLMQTVAASWLMTDISASPLMVA-LVQAAATLPIFLLSIPAGAIADNFDRRKVMLAGQLLMAIASALLTVL   95 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999876508999999-99999998899999999999982250899999999999999999999


Q ss_pred             ----CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             ----0110111002232100111111100012332100011112212233100011111111112222111111014567
Q gi|254780967|r   88 ----INSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC  163 (398)
Q Consensus        88 ----a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~  163 (398)
                          ..+.|.+++.-++.|++.+...|..++++.|..|+++...++++.+..++++-++||.+||.++.. .|=-+.|.+
T Consensus        96 ~~~g~~~~~~Ll~l~f~~G~~~A~~~PA~qA~vp~lVpr~~L~~AvALns~~~N~aR~iGPAlgG~Lia~-~G~~~~F~l  174 (524)
T pfam05977        96 AALGLLSPWLLLAFTFLIGIGTALNDPAWQASVGDLVPRRDVPAAVALNSVGYNLARSVGPALGGLLVAA-FGAATAFAV  174 (524)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf             9859874999999999999999998789999999857997889899998589988999888999999997-726999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-C
Q ss_conf             888887777888761678864022101111112333100000000025677788763100146888765455431531-1
Q gi|254780967|r  164 MGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-N  242 (398)
Q Consensus       164 ~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (398)
                      .++..+......+..-|+..++...++.-.....++.+.+.++|......+..+.....-..+....|.+-.+..+.+ .
T Consensus       175 nAlSyl~~i~~L~~~~~~~~~~~~p~e~~~~a~~~Glryv~~sp~lr~vl~~~~~~~~~~~~~~aLLPl~Ar~~l~gga~  254 (524)
T pfam05977       175 NALSYFAVIVAIARWKRDVPPSPLPRENLFGALRAGLRYTAMSREIRSVLVRAAAFGLSASAVWALLPLVARDLLGGDAG  254 (524)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             99999999999994787788988888776889999999997096699999999999999999999999999998379814


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             01588998865767788999998500156512468877888999999998732577764037998998999999999999
Q gi|254780967|r  243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN  322 (398)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (398)
                      .+++..+..+++.+++.+..+++-+|.++++....+............+       ..+.+.....+...|.+.-.....
T Consensus       255 ~yGlLl~~~G~GAv~GAl~l~~lr~~~~~~~lv~~~~~~~a~~~~~la~-------~~~~~l~~~~l~~~G~awi~~lst  327 (524)
T pfam05977       255 FYGILLGAFGAGAVLGALILSRLRRRLSSERLVLLASVGFALCCLSLAL-------SPSLWVAAIALLLGGACWITALST  327 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7899999999889999998898750157243899999999999999996-------518999999999998999999999


Q ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             9999985346-67699999999999999999999999998311799999999999999999999942200034
Q gi|254780967|r  323 FSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRK  394 (398)
Q Consensus       323 ~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  394 (398)
                      .+...+...| ..+|++.+++...-+.+.++++.+-|...+....+....  ..+....++.....+.+..+.
T Consensus       328 ~n~~vQ~~~P~wvRgR~lslY~~v~~Ggma~Gs~~WG~vA~~~g~~~aL~--~aa~~l~~~~~~~~~~~l~~~  398 (524)
T pfam05977       328 LNVAVQLASPRWVVGRALSVYLTVFFGGMAAGSWLWGTVAEALGLTGALL--LAAAALLAGAALGLRLRLPEG  398 (524)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHHCCCCCCC
T ss_conf             98999970879999999999999998567888999999873007499999--999999999998712027886


No 47 
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=100.00  E-value=7.6e-32  Score=192.08  Aligned_cols=346  Identities=13%  Similarity=0.143  Sum_probs=259.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999998865766999999999981999889999999999999999999999998650828999999999999999851
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV   86 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~   86 (398)
                      +.++.++-.+..+.--+.+|.+++.|++|..|.+ ++...|+-+|.+..++.|.+.||+|+|+-++.|+.++++++.+..
T Consensus        18 ~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~-liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~   96 (422)
T COG0738          18 LTSLFFLWGFITCLNDILIPHLKEVFDLTYFEAS-LIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW   96 (422)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999962211407999999386599999-999999998999861499999884248899999999999999986


Q ss_pred             ---CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC----------
Q ss_conf             ---0011011100223210011111110001233210001111221223310001111111111222211----------
Q gi|254780967|r   87 ---TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVAL----------  153 (398)
Q Consensus        87 ---~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~----------  153 (398)
                         -..++..++++-++.|.|.+...+.++.++++..|+++.++.++..+..+++|.+++|.+|+.++..          
T Consensus        97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~  176 (422)
T COG0738          97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ  176 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             66651129999999999984068888514416987277156889989999864169899999999999732251048889


Q ss_pred             --------CCCCCHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH
Q ss_conf             --------1111014567888887777888-7616788640221011111123331000000000256777887631001
Q gi|254780967|r  154 --------SGGWIGIFVCMGVITTFITLWY-YIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAIL  224 (398)
Q Consensus       154 --------~~gWr~~f~~~~~~~~~~~~~~-~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (398)
                              ...||.+|...+....++.+.. ..+.||..+.++++..+..   ....+++++|+++...+..++..+...
T Consensus       177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~---~~~~~l~~~~~~~~gvl~~FlYVG~Ev  253 (422)
T COG0738         177 ILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGS---AGLSSLFQNKHLRLGVLAIFLYVGAEV  253 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf             99999998875650899999999999999984359767856511256564---138899757489999999999984999


Q ss_pred             HHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf             4688876545543153110-158899886576778899999850015651246887788899999999873257776403
Q gi|254780967|r  225 GFVNSSQQIYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLL  303 (398)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (398)
                      ..-++.+.+..+..+.++. .....+....+.++|.++..++.+|+..+|.......+....+.   .....+.     .
T Consensus       254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~---~~~l~~g-----~  325 (422)
T COG0738         254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL---AVALIGG-----V  325 (422)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---HHHHHCC-----H
T ss_conf             9999999999865996389999999999999999999999999971888999999999999999---9999647-----4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             79989989999999999999999985346676999999999999999999999999983117
Q gi|254780967|r  304 IFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT  365 (398)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~  365 (398)
                      +......+.+..++.++|+..+.+.+..|++...++++. .+...+|++.|++.|...|...
T Consensus       326 v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l-~maivGGAiiP~l~G~i~d~~g  386 (422)
T COG0738         326 VALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLL-VMAIVGGAIIPPLQGVIADMFG  386 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE-EEHEECCHHHHHHHHHHHHHHH
T ss_conf             999999999998677788999999831476556541133-3110230388899999997540


No 48 
>KOG2533 consensus
Probab=100.00  E-value=8.3e-32  Score=191.84  Aligned_cols=248  Identities=16%  Similarity=0.205  Sum_probs=202.9

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf             99999999981999889999999999999999999999998650828999999999999999851001101110022321
Q gi|254780967|r   22 LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ  101 (398)
Q Consensus        22 ~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~  101 (398)
                      .+.+-.+.+|++....+.+ .+.+.|.++|++++++.|.+.||++-.+.+....+.+.+..++....+|++.+++.|++.
T Consensus        66 ~a~l~g~~edl~~~~~~l~-~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~ll  144 (495)
T KOG2533          66 NASLSGLKEDLKLVGNQLG-VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLL  144 (495)
T ss_pred             HHHHCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf             7877187401451132676-868999999999985699998747878999999999999999999883568999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             00111111100012332100011112212233100011111111112222-----1111110145678888877778887
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV-----ALSGGWIGIFVCMGVITTFITLWYY  176 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~-----~~~~gWr~~f~~~~~~~~~~~~~~~  176 (398)
                      |+.++..+|....+++.||+++||++.++++.+..++|.++|.++..++.     ....|||+.|++.+++.++..+..+
T Consensus       145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f  224 (495)
T KOG2533         145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF  224 (495)
T ss_pred             HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEE
T ss_conf             99871461699999987538145547889999836245688999998888743677766610479999999999887436


Q ss_pred             HHCCCCCCH------HH-------HCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             616788640------22-------10111-----1112333100000000025677788763100146888765455431
Q gi|254780967|r  177 IRFPETLDP------RD-------VRPLN-----LYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY  238 (398)
Q Consensus       177 ~~~pet~~~------~~-------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (398)
                      +.+|+.+.+      ++       .++.+     .+..+.++++.+++|..|.+.+...+......++.++.|.++.+..
T Consensus       225 ~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~  304 (495)
T KOG2533         225 FFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG  304 (495)
T ss_pred             EEECCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf             88169810066676366542245665345666544447899999990637799999999998637307889999987379


Q ss_pred             CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             5311-0158899886576778899999850015
Q gi|254780967|r  239 QLGN-LFPIAFAVGGFAMSIASFINSRLVEKFG  270 (398)
Q Consensus       239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~  270 (398)
                      +.+. ..........++..++.++++.+.||..
T Consensus       305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~  337 (495)
T KOG2533         305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLK  337 (495)
T ss_pred             CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             857555000063899989999999999999875


No 49 
>KOG0255 consensus
Probab=99.97  E-value=3.2e-28  Score=172.10  Aligned_cols=352  Identities=17%  Similarity=0.213  Sum_probs=198.3

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf             99819998899999999999999999999999986508289999999999999998510011011100223210011111
Q gi|254780967|r   29 SDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAP  108 (398)
Q Consensus        29 ~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~  108 (398)
                      .++++.+..... +..+.|++|..+|.+++|+++||+|||++++.+..+..++.+.+++++|++.+++.|+++|++.+..
T Consensus       110 ~~~~c~~~~~~~-~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~  188 (521)
T KOG0255         110 WNLVCDSSTLVA-LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP  188 (521)
T ss_pred             HHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf             657415399999-9999999999999999998877437606999999999998899997330999999999999863108


Q ss_pred             CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             11000123321000111122122331000111111111122221111110145678888877778887616788640221
Q gi|254780967|r  109 RIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDV  188 (398)
Q Consensus       109 ~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~  188 (398)
                      ......++.|++++++|+.+..+ ...+..++..+|..++.+..   +||+.+++..+.+.+..++ ++..||+++-...
T Consensus       189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~  263 (521)
T KOG0255         189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS  263 (521)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHH
T ss_conf             99999999852265576688999-87877999999999999987---2899999999999999999-9987658779998


Q ss_pred             C-----------C--------CCCCCCC-----------------CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             0-----------1--------1111123-----------------33100000000025677788763100146888765
Q gi|254780967|r  189 R-----------P--------LNLYAIL-----------------HSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQ  232 (398)
Q Consensus       189 ~-----------~--------~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (398)
                      +           +        .+.+...                 ..+..+++.|+.....+...+... .+......  
T Consensus       264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-~~~~~y~g--  340 (521)
T KOG0255         264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF-VFSLVYYG--  340 (521)
T ss_pred             HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHH-HHHHHHHH--
T ss_conf             387777999999987543555665888999988877665215663229999805899999999999999-98888977--


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             45543153110158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r  233 IYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA  312 (398)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (398)
                      ...+..+.+......+...+..........+...++.++|.....+.....+..   +........... ........+.
T Consensus       341 l~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~  416 (521)
T KOG0255         341 LSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGL---LLFGWLPDDLGG-WLHWILPLLG  416 (521)
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCCC-HHHHHHHHHH
T ss_conf             864243036308899999999999998841213421418999999999999999---999998444420-6999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             999999999999999853466-76999999999999999999999999983-1179999999999999999999994220
Q gi|254780967|r  313 SFQFGLINSNFSSISMEPFSH-LAGTASSIFGFINTVISTILGIIIGQSFN-GTTYPITIGFFGIAVSSFICILIVEKNQ  390 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~-~~G~a~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (398)
                      .++.+...........|..|+ .+..+.+..+.....++...+.+.-.... ....+.........+...++..++++.+
T Consensus       417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~  496 (521)
T KOG0255         417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK  496 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999987725089989999999999999999999999999865546799999999999999999632215


Q ss_pred             HHH
Q ss_conf             003
Q gi|254780967|r  391 MFR  393 (398)
Q Consensus       391 ~~r  393 (398)
                      ...
T Consensus       497 ~~~  499 (521)
T KOG0255         497 GKP  499 (521)
T ss_pred             CCC
T ss_conf             885


No 50 
>TIGR00900 2A0121 H+ Antiporter protein; InterPro: IPR004751   Drug antiporters which use the proton motive force for the active efflux of the drug .; GO: 0016021 integral to membrane.
Probab=99.97  E-value=5.4e-29  Score=176.36  Aligned_cols=350  Identities=16%  Similarity=0.141  Sum_probs=253.3

Q ss_pred             HHHHHHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH---HH
Q ss_conf             9988657669999999--999819998899999999999999999999999986508289999999999999998---51
Q gi|254780967|r   12 AINSLGIDIILPCLPK--ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI---MV   86 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~--i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~---~~   86 (398)
                      .+..++..+-..++|.  ...+.+-|....+ +..+.+++++.+..|+.|...||++||++++..-++-++....   ..
T Consensus         9 ~~s~~G~ai~~vAl~llA~vl~~~g~~~~l~-la~~~~~~p~~~~~piaG~~~DR~~Rk~~~~~~Dlirav~~~~l~~~~   87 (387)
T TIGR00900         9 LISLLGSAITQVALPLLAYVLAGTGSASVLS-LAALAGLLPYVVLSPIAGVLVDRYDRKKVMIGADLIRAVLVAVLPFVA   87 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999985047666899-999998876414303300231157711667888899999999999999


Q ss_pred             CCC-----CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCEECCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf             001-----1011100223210011111110001233210001--11122122331000111-111111122221111110
Q gi|254780967|r   87 TIN-----SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR--DMAKVLSIAMMIFMIMP-ILAPSIGQATVALSGGWI  158 (398)
Q Consensus        87 ~a~-----~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~--~~~~~~~~~~~~~~~g~-~igp~ig~~l~~~~~gWr  158 (398)
                      +.+     ++|++++.-++.++...+..|...+++.|..|+|  |..|++|..+...++.. ++||.+|+.+.. +.+-+
T Consensus        88 ~~~Gvd~l~~~~~~v~~~i~~~~~~Ff~pa~~a~~P~~vp~e~W~l~~Ans~~~~~~~~~~r~vgPgigg~~~~-~~g~~  166 (387)
T TIGR00900        88 LLGGVDVLEIWMVYVVAFILAIAQAFFTPAYQAMLPDLVPEEKWQLTRANSLSQLVRSLFYRIVGPGIGGLLYA-TLGIK  166 (387)
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf             84650123499999999999977642130222002000211234799998799999999887567999999999-99999


Q ss_pred             HHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHC-C-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH-H
Q ss_conf             145678888877778-8876167886402210-1-------1111123331000000000256777887631001468-8
Q gi|254780967|r  159 GIFVCMGVITTFITL-WYYIRFPETLDPRDVR-P-------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV-N  228 (398)
Q Consensus       159 ~~f~~~~~~~~~~~~-~~~~~~pet~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  228 (398)
                      +.++..++-.++... ....+.||..++++++ +       .-.++..++.+-+++||..+................. .
T Consensus       167 ~~~~~~a~~F~~s~~l~~~~r~p~~~~~~~~~~~~rkts~~~~~rd~~eG~~~~~~~~~L~~l~~~~~~~~~~~~p~~~~  246 (387)
T TIGR00900       167 WAILVDAVGFLISALLIVSVRIPEKAASEIEPLSERKTSLKAVLRDILEGLKFVLKNKVLRTLLLLALLFNLVFAPIIVV  246 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999998650576667888888752565899999999999999970768999999999999985127887


Q ss_pred             HHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH--HHHHHHHCCCCCCCCHHH
Q ss_conf             8765455431531-1015889988657677889999985001565124688778889999--999987325777640379
Q gi|254780967|r  229 SSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITG--SWLLVQITSNHPIHLLIF  305 (398)
Q Consensus       229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  305 (398)
                      ..|++..+..+.+ .++++.....++++.+|++..+.+.++.-.|+..+..+........  ..............++.+
T Consensus       247 l~P~~~~~~~~~~~~~~G~~~~af~~G~l~G~L~~~~~L~~~~~~~~~r~~l~~~a~~~~g~~~~~~~~~~~~~~~~~~~  326 (387)
T TIGR00900       247 LFPYVTSKYLNRTSVHVGWVLAAFGLGALLGALLLGSILRRLLGRYFKRIALITGAVLVIGLAILVVGLLPPRNSGFLLL  326 (387)
T ss_pred             HHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             63032144407862256799999999999999999999988761134348999999999999989876238961489999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98998999999999999999998534-66769999999999999999999999999831
Q gi|254780967|r  306 IAFFFLASFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNG  363 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~  363 (398)
                      ....+..|++.+.......+..++.. +|.+|+++|+..+.......+.-++.|.+.|+
T Consensus       327 l~~~~~~G~~~~~~~~~~~~~~q~~v~~~~~GRV~~~~~~~~~~a~Plgl~l~G~L~~~  385 (387)
T TIGR00900       327 LVLAFAIGVGVGLINVPIGTLLQRSVPAELLGRVFGLQFSLSSAAGPLGLILAGPLADK  385 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999864203455877887888750078515899999999999999889999988863


No 51 
>TIGR00886 2A0108 nitrite transporter; InterPro: IPR004737    This family represents nitrate/nitrite antiporters in bacteria, fungi, algae and marine diatoms. Nitrate transporters in Escherichia coli are involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. NarK is polytopic membrane protein with 12 transmembrane domains which is involved in nitrate uptake and nitrite excretion and is thought to function as a nitrate/nitrite antiporter. At low concentrations of nitrate, NarK mediates the electrogenic excretion of nitrite rather than nitrate/nitrite exchange. This process prevents intracellular accumulation of toxic levels of nitrite and allows further detoxification in the periplasm through the action of nitrite reductase .   In the opportunistic fungal pathogen Aspergillus fumigatus the nitrate transporter crnA clusters with nitrite reductase (niiA) and nitrate reductase (niaD). NiaD, niiA and crnA are induced by nitrate and repressed by ammonium at the transcriptional level . In Hebeloma cylindrosporum the nitrate transporter polypeptide (NRT2) is characterised by 12 transmembrane domains and presents both a long putative intracellular loop and a short C-terminal tail, two structural features which distinguish fungal high-affinity transporters from their plant homologues. Transcription is repressed by ammonium and strongly stimulated by nitrate but also by organic nitrogen or nitrogen deficiency.  ; GO: 0015103 inorganic anion transmembrane transporter activity, 0015698 inorganic anion transport, 0016021 integral to membrane.
Probab=99.97  E-value=1.5e-29  Score=179.43  Aligned_cols=262  Identities=19%  Similarity=0.260  Sum_probs=191.6

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHH---HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             999999886576699-9999999---981999889999999999999999999999998650828999999999999999
Q gi|254780967|r    8 AMLMAINSLGIDIIL-PCLPKIS---DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF   83 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~-p~lp~i~---~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~   83 (398)
                      +.+....++..-... |..|.+.   +||++|.+|.. .+...-..+-++.-++.|++.||||.|+....+++...+-++
T Consensus         6 S~~~F~lsF~~W~~~~~L~~~~~~G~~dl~Ls~~Q~~-~~~~~p~~~g~~~R~~~G~l~d~~GpR~~~~~~~~~~~IP~~   84 (472)
T TIGR00886         6 SWFGFFLSFLVWFAFSPLAVQIIKGKDDLGLSTAQLG-NLVAVPVLAGAVLRIILGFLVDKFGPRKTTTLSLLLLAIPCL   84 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             7889999999999987778654157633147999999-999999999999999988634776718999999999999999


Q ss_pred             HHHCCC-----CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCC----CC---CCCCCCC
Q ss_conf             851001-----10111002232100111111100012332100011112212233100011111----11---1112222
Q gi|254780967|r   84 IMVTIN-----SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPIL----AP---SIGQATV  151 (398)
Q Consensus        84 ~~~~a~-----~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~i----gp---~ig~~l~  151 (398)
                      ..+++.     |++.|++.|++.|+++|. .+.++..++++||+++.+.++++.....+.|..+    .|   .+-...+
T Consensus        85 ~~~~~~~~p~~s~~~L~~~rlf~Gi~Gg~-Fa~~~~~~s~fFp~~~~GtA~gl~aG~GN~G~~~~~~~~Pa~f~i~~~~~  163 (472)
T TIGR00886        85 LAGLAVQDPSTSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPALFAIIASLI  163 (472)
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99841268998999999999999675546-88766566306882201467588614326789999999999999999862


Q ss_pred             C-----------CCCCCCHHH-HHHHHHHHHHHHHHHHHCCCCCCHH----------------------------HHCCC
Q ss_conf             1-----------111110145-6788888777788876167886402----------------------------21011
Q gi|254780967|r  152 A-----------LSGGWIGIF-VCMGVITTFITLWYYIRFPETLDPR----------------------------DVRPL  191 (398)
Q Consensus       152 ~-----------~~~gWr~~f-~~~~~~~~~~~~~~~~~~pet~~~~----------------------------~~~~~  191 (398)
                      .           .+.+||+.+ ...+.+..+..++.+....++.+.+                            +.++.
T Consensus       164 ~~~f~G~p~~F~~~~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ws~r~~~ARGl~v~~~~~~~~~~~~~~~~~~~~  243 (472)
T TIGR00886       164 KGAFGGLPQTFDAHLAWGWAFVIVPALILLLIALLIFFVVADTPPGKWSERHKSARGLEVTTLKDDYFLLIMNLPATAKL  243 (472)
T ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCCCC
T ss_conf             21127898401101365044676989999999999999998624676445776557754103354303201025777544


Q ss_pred             C-----------------------------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             1-----------------------------------------11123331000000000256777887631001468887
Q gi|254780967|r  192 N-----------------------------------------LYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSS  230 (398)
Q Consensus       192 ~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (398)
                      +                                         .....++..+++++++.|...+.+...++.+.++-+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~~~l~Y~~tFGsflg~~s~~  323 (472)
T TIGR00886       244 SVKSARLSKIAFLVAALKVVVEPLLGTEALATYNIWVLNAIIESLSLKEQLKVFRDKHTWILALLYSVTFGSFLGVSSIF  323 (472)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             52010036777677542232102121332334435777887415564327987436314777765652240699999999


Q ss_pred             HH---HHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             65---45543153110-1588998865767788999998500156
Q gi|254780967|r  231 QQ---IYVGIYQLGNL-FPIAFAVGGFAMSIASFINSRLVEKFGI  271 (398)
Q Consensus       231 ~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~  271 (398)
                      |.   +..+.++.++. .+.+.++.++...+.....|.++||.+.
T Consensus       324 ~~vfl~~~~~fg~~~~~aG~~a~~~~~~g~~~RP~GG~lsD~~gg  368 (472)
T TIGR00886       324 AMVFLLFKDQFGLSKVQAGAYASLGGLLGLLARPLGGLLSDRLGG  368 (472)
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             889987416799887339999999998988863766689987268


No 52 
>KOG0254 consensus
Probab=99.97  E-value=4.9e-28  Score=171.08  Aligned_cols=332  Identities=17%  Similarity=0.183  Sum_probs=205.4

Q ss_pred             HHHHHHHHHHHHHC-----CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             69999999999819-----998--89999999999999999999999998650828999999999999999851001101
Q gi|254780967|r   20 IILPCLPKISDSLH-----LSN--ENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT   92 (398)
Q Consensus        20 ~~~p~lp~i~~~l~-----~s~--~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~   92 (398)
                      ...|..+.+.++..     .+.  .+.+ +..+.+.++..+++++.|+++|++|||+.++.+.+.+.++.+++++++|++
T Consensus        65 ~~s~~~~~~~~~~~~~~~~~~~~~~~~s-~i~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~i~~~iG~ii~~~a~~~~  143 (513)
T KOG0254          65 GISGALDFLQRFASLYDLSTGEYSVRQG-LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY  143 (513)
T ss_pred             CHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             0378899998404323444304677767-999999999999999999999784339999999999999999999970499


Q ss_pred             HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHH
Q ss_conf             11002232100111111100012332100011112212233100011111111112222111-11101456788888777
Q gi|254780967|r   93 GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFI  171 (398)
Q Consensus        93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~  171 (398)
                      +++++|+++|+|.|........+++|..|++.|+...+..+....+|..++..++.. .... .+||..+.+..+.+++.
T Consensus       144 ~l~~GR~l~G~g~G~~~~~~piyisEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~-~~~~~~~Wr~~~~~~~i~~~~~  222 (513)
T KOG0254         144 QLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG-TSKVYAGWRIPLGLALIPAVIL  222 (513)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHH
T ss_conf             999999998545278766336776303765268899999999999999999998662-0245655899999999999999


Q ss_pred             HHHHHHHCCCCCCHHHHC--------------C---CCCCCCC----------------C-CCCCCCC----CCHHHHHH
Q ss_conf             788876167886402210--------------1---1111123----------------3-3100000----00002567
Q gi|254780967|r  172 TLWYYIRFPETLDPRDVR--------------P---LNLYAIL----------------H-SFSLIFK----HRASTLYN  213 (398)
Q Consensus       172 ~~~~~~~~pet~~~~~~~--------------~---~~~~~~~----------------~-~~~~~~~----~~~~~~~~  213 (398)
                      .+. ...+||+++.--++              .   .+.....                + .++.+++    ++..+...
T Consensus       223 ~~~-~~~~pesP~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~  301 (513)
T KOG0254         223 ALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLL  301 (513)
T ss_pred             HHH-HHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             999-9946788799998394999999999980998430577899999998898887520024765223477778999999


Q ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             77887631001468887654554315311015889988657677889999985001565124688778889999999987
Q gi|254780967|r  214 IANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQ  293 (398)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~  293 (398)
                      +.......+......+.+.+++.....+.. .......++...++..+...+.||+|+|+....+...............
T Consensus       302 l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~~~~~~~lvd~~GRr~lll~s~~~m~~~~~~~~~~~  380 (513)
T KOG0254         302 LQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVG  380 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999985889999999999995468722-8999999999999999999999873541489987999999999999986


Q ss_pred             HCCCCC-----CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             325777-----64037998998999999999999-9999985346-67699999999999999999999
Q gi|254780967|r  294 ITSNHP-----IHLLIFIAFFFLASFQFGLINSN-FSSISMEPFS-HLAGTASSIFGFINTVISTILGI  355 (398)
Q Consensus       294 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~  355 (398)
                      ......     ...+.......+....+.....+ ......|.+| +.|+.+.++..............
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~  449 (513)
T KOG0254         381 VFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF  449 (513)
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             211036541137799999999999999998732478888860241778989999999998899999999


No 53 
>pfam03825 Nuc_H_symport Nucleoside H+ symporter.
Probab=99.97  E-value=1.8e-26  Score=162.49  Aligned_cols=378  Identities=11%  Similarity=0.094  Sum_probs=242.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998899999999999999999999999986508-28999999999999999
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-RKIVMMFGLVIHIISTF   83 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~g~~~~~i~~~   83 (398)
                      .=++.+.++-......+.|-+|..-++.|.|..|+| ++.+...+...++++++|.++||++ |||++.++.....+...
T Consensus         5 ~RLs~~yFl~F~~~G~~~P~~~~yL~~~Gfs~~qIG-~i~a~~~i~~iv~p~~wG~lADr~~~~~~vl~~~~~~~~~~~~   83 (400)
T pfam03825         5 FRLKVMMFLQLFIWGAWLVTLGSYMGMTGFAGAQIG-LVYSSWGIAAIVMPFLSGIIADRWFSAERVLAVCHLIGAVALF   83 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             569999999999999999999999860798999999-9999999999999999999983456478999999999999999


Q ss_pred             HHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC---CCHH
Q ss_conf             8510011011100223210011111110001233210001111221223310001111111111222211111---1014
Q gi|254780967|r   84 IMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG---WIGI  160 (398)
Q Consensus        84 ~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g---Wr~~  160 (398)
                      ...+.++++.+...-++..+......|...++.-+..+++  .+.++..-.-.++|.+++....+.++....+   -++.
T Consensus        84 ~~~~~~~f~~~~~~~~~~~~~~~p~lpL~dsi~~~~l~~~--~~~Yg~iRlwGSiGfi~a~~~~g~~~~~~~~~~~~~~~  161 (400)
T pfam03825        84 GAAQVTTFWPFFAVYLVNSLAYMPTLALTNSIAFANLRDP--VTDFPPIRVGGTVGWILASWPFVMWLVSLATVELSRWQ  161 (400)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             9998524999999999999998350578999999971275--67787203576499999998899999995012056799


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
Q ss_conf             56788888777788876167886402210111111233310000000002567778876310014688876545543153
Q gi|254780967|r  161 FVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQL  240 (398)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (398)
                      +++.+..+.+... ..+.+||++++++.++...+...++.++++|||+++.+.+...+.....-.|....+.+.++..+.
T Consensus       162 ~~i~~~~~~ll~~-~~~~lp~~p~~~~~~~~~~~~~~~~~~~lLk~~~~~~Fl~~~~l~~~~h~~yy~F~s~yl~~~gg~  240 (400)
T pfam03825       162 LLIAAGVSALLAG-YALTLPHTPAKRKADDSVDKLLGLDAFKLLKNPRMAVFFVFSFLLGAILQIYNVFANAFLTNFVGF  240 (400)
T ss_pred             HHHHHHHHHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9999999999999-997388888766555420002025799996591499999999999989999999899999984772


Q ss_pred             CCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHH
Q ss_conf             1101-58899886576778899999850015651246887788899999999873257-776403799899899999999
Q gi|254780967|r  241 GNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSN-HPIHLLIFIAFFFLASFQFGL  318 (398)
Q Consensus       241 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  318 (398)
                      +... +...+...+..+..-...+++.+|++.|+....+.....+--   .+...... .+...........+-+..++.
T Consensus       241 ~~~~~~~~~~lgvvaEI~~f~~~~~ll~r~g~~~lll~a~~~~~lR~---~l~a~~~~~~~~~~~~l~l~q~LHg~tfg~  317 (400)
T pfam03825       241 AVKLASIVLSLGQVAEIIFMLTLPFFLKRFGIKVVMLVGVVAWALRF---AFFAYGADPVPFGVALLLLSMIVHGVAYDF  317 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             67799999999999999999999999998489999999999999999---999942674037999999999999999999


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH------HHHHHHHH-HHHHHHHHHHHHHHHCC
Q ss_conf             99999999985346-676999999999999999-99999999998311------79999999-99999999999999422
Q gi|254780967|r  319 INSNFSSISMEPFS-HLAGTASSIFGFINTVIS-TILGIIIGQSFNGT------TYPITIGF-FGIAVSSFICILIVEKN  389 (398)
Q Consensus       319 ~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~-~~~~~~~g~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~  389 (398)
                      .......+..+..| +.++++.++++.+.+..| .+++.+-|.++|..      .|+..+.. ...++...+.+.+..|.
T Consensus       318 f~~a~~~~v~~~~p~~~ra~~Q~l~~~~~~G~g~~iG~~~~G~l~~~f~~~~~~~w~~~w~~~~~~~~~~~~~f~~~f~~  397 (400)
T pfam03825       318 FNITGYIFVDKEVPKDIRASAQGLFNLMINGVGNVLGSILSGMLVGMFTTDGSVDWQTLWLVFAGMALALAVLFMLFFRY  397 (400)
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999998688553879999999999708999999999999999706776873999999999999999999998368


No 54 
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97  E-value=2.4e-27  Score=167.24  Aligned_cols=361  Identities=15%  Similarity=0.152  Sum_probs=258.4

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
Q ss_conf             57669999999999819998899999999999999999999999986508289999999999999998510011011100
Q gi|254780967|r   17 GIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLC   96 (398)
Q Consensus        17 ~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~   96 (398)
                      .++..-|.+++|++|+|.|.++.| +..+...+.+++.+++..+++.|+|.++.+..++++.+++.++-... +.+.++.
T Consensus        27 ~itsvgPlL~~Ir~~~gls~s~aG-lLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~llli~~G~~iR~~~-~~~~L~~  104 (395)
T COG2807          27 AITSVGPLLDEIRQDLGLSFSVAG-LLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFL  104 (395)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHH
T ss_conf             453003109999877166188888-99988999999887540799998756889999999999999998205-3889999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             22321001111111000123321000111122122331000111111111122221111110145678888877778887
Q gi|254780967|r   97 MRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYY  176 (398)
Q Consensus        97 ~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~  176 (398)
                      +-.+.|.|.+...+.-+..|.+.|| ++.+..++.++...+.+..+++.+.--+.+...+||.....-+.++++..+.++
T Consensus       105 gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl  183 (395)
T COG2807         105 GTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL  183 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999974699998862699986645-401268769999998999887662657988626179999999999999999986


Q ss_pred             HHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             61678864022101111112333100000000025677788763100146888765455431531101588998865767
Q gi|254780967|r  177 IRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMS  256 (398)
Q Consensus       177 ~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (398)
                         |...+++   ..+.+....+-..++|+|..|...+..++.....+....+.|.+++|..-.+++.+...+...+...
T Consensus       184 ---Pq~~r~~---~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~  257 (395)
T COG2807         184 ---PQALREQ---AASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQL  257 (395)
T ss_pred             ---HHCCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             ---5303521---1012456675550035840689999997668899999999999999758787875029999999999


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH
Q ss_conf             7889999985001565124688778889999999987325777640379989989999999999999999985--34667
Q gi|254780967|r  257 IASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME--PFSHL  334 (398)
Q Consensus       257 ~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  334 (398)
                      ..++..+.+.+|..++|............ +.+.+. ..+......+     ..+.+.+.+..++.......+  +.++.
T Consensus       258 ~~~ll~P~la~R~~n~r~~~~~~~~~~l~-G~~G~~-~~P~~~~~lw-----~~llG~G~G~~F~laL~li~~rs~~a~~  330 (395)
T COG2807         258 PTALLIPLLARRSKNQRPLVVLALLLMLV-GLVGLL-LAPGQLPILW-----ALLLGLGQGGAFPLALTLILLRSSDAAI  330 (395)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHH-HHHHHHHHHH-----HHHHHCCCCHHHHHHHHHHHHHCCCHHH
T ss_conf             89878899998831523499999999999-998899-8401479999-----9999076103789999999860578678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             6999999999999999999999999983117-999999-9999999999999994220003
Q gi|254780967|r  335 AGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITIG-FFGIAVSSFICILIVEKNQMFR  393 (398)
Q Consensus       335 ~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~r  393 (398)
                      ++.-+++...+++..++.++++.|.+.|.+. |...+. +..+.+...+.-+...|+|..+
T Consensus       331 Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~i~  391 (395)
T COG2807         331 AAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNRYIR  391 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             8998887630158987440166767897228808899999999999999865306127767


No 55 
>KOG2504 consensus
Probab=99.97  E-value=7.3e-28  Score=170.10  Aligned_cols=344  Identities=17%  Similarity=0.162  Sum_probs=235.7

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC-CCCC
Q ss_conf             999999998199988999999999999999999999999865082899999999999999985100110111002-2321
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCM-RLIQ  101 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~-r~l~  101 (398)
                      -..++++++|+.++++.+ |+.+.....+.+..++.+.+.||+|.|++.+.|.++..++.++..|++++|++++. -++.
T Consensus        67 v~~~~~~~~f~~s~~~~~-~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~  145 (509)
T KOG2504          67 LLFEELMDYFGSSSSQIA-WIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIG  145 (509)
T ss_pred             EEHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             328999987289820688-9999999999862406799887607448887788999989999988847999999999983


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             00111111100012332100011112212233100011111111112222111111014567888887777888761678
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE  181 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pe  181 (398)
                      |+|.+..+.++..++..+| +++|+.+.++...+.++|..+=|.+...+++ ..|||+.+++.+.+.+-..+......|.
T Consensus       146 G~G~g~~~~paiviv~~YF-~kkR~lA~Gia~~GsGvG~~~~~~l~~~l~~-~~Gwr~~~l~~~~~~l~~~~~~~~~rp~  223 (509)
T KOG2504         146 GLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS-KYGWRGALLIFGGISLNVLVAGALLRPL  223 (509)
T ss_pred             CCCCHHHHCCHHHHHHHHH-HHHHHHHHHHEEECCCCEEEEHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             3521533113899887776-7545445420122476346756789999988-7086899999999999999999830787


Q ss_pred             CCCH----------------------------HHHCCC---------------CCC--CCCCCC----CCCCCCCHHHHH
Q ss_conf             8640----------------------------221011---------------111--123331----000000000256
Q gi|254780967|r  182 TLDP----------------------------RDVRPL---------------NLY--AILHSF----SLIFKHRASTLY  212 (398)
Q Consensus       182 t~~~----------------------------~~~~~~---------------~~~--~~~~~~----~~~~~~~~~~~~  212 (398)
                      +.+.                            ++....               +.+  ...+..    .+++++|.++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ll~~~~fl~~  303 (509)
T KOG2504         224 SPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLL  303 (509)
T ss_pred             CCCCCCHHHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCHHHHHCCHHHHHH
T ss_conf             65668514443213200110333311103577788887666544056760685100153000032020788615589999


Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             77788763100146888765455431531101588998865767788999998500156512468877888999999998
Q gi|254780967|r  213 NIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLV  292 (398)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~  292 (398)
                      .+...+.+.+++......|.+..+........+...+..++..+++.++.|++.|+...++............... ...
T Consensus       304 ~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~~a~l~sii~~~~i~gRi~~G~laD~~~~~~~~~~~~~l~~~gl~~-~~~  382 (509)
T KOG2504         304 ALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR-LFL  382 (509)
T ss_pred             HHHHHHHHHHHHHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHH-HHH
T ss_conf             9999999998763344408778555984788999999998751206401265516763015798999999999999-988


Q ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf             7325777640379989989999999999999999985346-676999999999999999999999999983117-99999
Q gi|254780967|r  293 QITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITI  370 (398)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~  370 (398)
                      .  ...  ..........+.++..+...........+..+ ++-..+.++....+-++...++|+.|.+.|.+. |....
T Consensus       383 p--~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f  458 (509)
T KOG2504         383 P--FAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF  458 (509)
T ss_pred             H--HCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
T ss_conf             6--135--789999999999852447887566899986398750369999999989998700213413220047730189


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780967|r  371 GFFG  374 (398)
Q Consensus       371 ~~~~  374 (398)
                      .+.+
T Consensus       459 ~~~g  462 (509)
T KOG2504         459 YFCG  462 (509)
T ss_pred             HHCC
T ss_conf             8705


No 56 
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747   This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.97  E-value=3.2e-27  Score=166.57  Aligned_cols=341  Identities=13%  Similarity=0.118  Sum_probs=261.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC
Q ss_conf             65766999999999981999889999999999999999999999998650828999999999999999851001101110
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML   95 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~   95 (398)
                      -.++..-|.++++.+++|.|+++.| +++|...+.+++..+..-+++.|+|.+|++..+++..++|.+.--..++-..|+
T Consensus        14 PalTSvgPLL~~~R~~lgmS~~~AG-LLT~LP~L~fa~l~~~Ap~LarRfG~eR~v~~~Ll~i~aG~l~R~~~~~~~~Lf   92 (372)
T TIGR00896        14 PALTSVGPLLEEVRSALGMSASVAG-LLTALPVLCFAVLAPLAPKLARRFGEERSVLAGLLLIAAGILIRESAPGTALLF   92 (372)
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             9997488789999877351588899-987578999998887545887662527999999999999999830477305999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHH
Q ss_conf             0223210011111110001233210001111221223310001111111111222211111-101456788888777788
Q gi|254780967|r   96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-WIGIFVCMGVITTFITLW  174 (398)
Q Consensus        96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-Wr~~f~~~~~~~~~~~~~  174 (398)
                      .+-.+.|.|.+...+..+.+|++.|| |+-+..+|.++++.+.+..+|..+.-.+.++..| |+..+..-..+.++..+.
T Consensus        93 ~gtal~G~GIai~nVLlP~lIKR~Fp-~~~g~m~GlYs~al~~gaaLaaa~tVPL~~~~~g~W~~~L~~W~~~allAll~  171 (372)
T TIGR00896        93 AGTALAGVGIAIINVLLPSLIKRDFP-ERVGLMTGLYSMALALGAALAAAATVPLAQALGGRWQQALALWALLALLALLL  171 (372)
T ss_pred             HHHHHHHHHHHHHHHHHCCHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999998999977570301002145-54304678999999988766613324556246784189999999999999982


Q ss_pred             HHHHCCCCCC----------HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf             8761678864----------022101111112333100000000025677788763100146888765455431531101
Q gi|254780967|r  175 YYIRFPETLD----------PRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF  244 (398)
Q Consensus       175 ~~~~~pet~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (398)
                      ++....+.+.          +||.+. .+|+....-+.+.++|.-|...+..++....++..+.+.|.++.+..-...+.
T Consensus       172 W~PQ~r~~~a~~~~~~~APrPedGrs-aekrael~~~~i~rsp~AW~vt~f~GL~s~~~Y~~igWlP~Ili~~G~sa~~A  250 (372)
T TIGR00896       172 WLPQVRRRKAANQTAKRAPRPEDGRS-AEKRAELTPKRIWRSPLAWQVTVFFGLQSLLYYIVIGWLPAILISHGVSAATA  250 (372)
T ss_pred             CCHHHCCCCCHHHCCCCCCCCCCCCC-HHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             02020142151102677978877640-33330157652131505899999998999999999999999998638877568


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             58899886576778899999850015651246887788899999999873257776403799899899999999999999
Q gi|254780967|r  245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS  324 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (398)
                      +...+...+.....+++.+++.+|.+++|..........+.. .+.+.... .+.   ... +...+.|++.|..++..-
T Consensus       251 G~ll~l~~~~~~~~~ll~P~~A~r~kdqR~i~~~~~~~~L~G-~~Gl~~~P-~~~---~~~-iW~~~~G~G~G~~f~LaL  324 (372)
T TIGR00896       251 GLLLALMQLAQLASALLIPLLASRVKDQRGIVVVVAVLQLVG-LCGLLFAP-LHG---LWA-IWALVLGLGQGGAFSLAL  324 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-HHHHHHHH-HHH---HHH-HHHHHHHHCCCHHHHHHH
T ss_conf             999999999987689998899704885699999999999999-99999850-459---999-999998301203699999


Q ss_pred             HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99985--346676999999999999999999999999983117
Q gi|254780967|r  325 SISME--PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTT  365 (398)
Q Consensus       325 ~~~~~--~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~  365 (398)
                      .....  ..++.++.-+++...++|..+..+|..+|.++|.+.
T Consensus       325 tli~lRs~~a~~AA~LS~maQs~GYllA~~GP~~vG~L~d~~g  367 (372)
T TIGR00896       325 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLLVGVLHDISG  367 (372)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999962168899999888788999998645888888872156


No 57 
>KOG3764 consensus
Probab=99.97  E-value=6.4e-30  Score=181.45  Aligned_cols=326  Identities=16%  Similarity=0.137  Sum_probs=215.2

Q ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf             99981999889999999999999999999999998650828999999999999999851001101110022321001111
Q gi|254780967|r   28 ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAA  107 (398)
Q Consensus        28 i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~  107 (398)
                      =+++++.++.++| ++.+.+.+...+..++.|.+.||+|+|-.+++|+.+...++++.++.+++++++++|.+||+|.++
T Consensus        97 ~~~~~~~e~~~iG-~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~  175 (464)
T KOG3764          97 EAISLDRENTQIG-LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAF  175 (464)
T ss_pred             HCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             1037554320023-789999999997454421567773564279999999999999998705107899999986443888


Q ss_pred             CCCCCHHHHHHHHCCCC-CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             11100012332100011-11221223310001111111111222211111101456788888777788876167886402
Q gi|254780967|r  108 PRIITISIIRDIYDGRD-MAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPR  186 (398)
Q Consensus       108 ~~~~~~a~i~~~~~~~~-~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~  186 (398)
                      .++.+.++++|.+|+++ |++++|......++|-.+||..||.+. +..|.+.+|.+++.+.++...+.++.++.+..++
T Consensus       176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY-e~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~  254 (464)
T KOG3764         176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY-EFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP  254 (464)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHH-HHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCC
T ss_conf             875338999987155304447899999987503321587440057-6448757489999999999999986558334686


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2101111112333100000000025677788763100146888765455431531-101588998865767788999998
Q gi|254780967|r  187 DVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRL  265 (398)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l  265 (398)
                      +     .......+++++++|..+.......++....--..-..+.+..+....+ +..+..+-...+...++..+.+.+
T Consensus       255 ~-----~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~l  329 (464)
T KOG3764         255 D-----STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKL  329 (464)
T ss_pred             C-----CCCCCCCHHHHHHCCHHHHHHCCHHHCCCHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCHHHHH
T ss_conf             4-----46667328998847247555330221121088757510889997616887501246110253131067307999


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q ss_conf             5001565124688778889999999987325777640379989-9899999999999999999853466---76999999
Q gi|254780967|r  266 VEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFSH---LAGTASSI  341 (398)
Q Consensus       266 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~G~a~~l  341 (398)
                      .||++..+.... +....+............... .+++.... .+..+.......|....+....+.+   .-|++.++
T Consensus       330 a~k~~~~~wl~~-~~gl~~~G~~~~~iP~~~~~~-~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaI  407 (464)
T KOG3764         330 ADKYPHLRWLLS-LGGLATVGVSSGPIPFATSIA-QLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAI  407 (464)
T ss_pred             HHHCCCHHHHHH-HHHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEHHHH
T ss_conf             876673358999-877999988843147555289-886635788898888788776466776034222665311118999


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf             99999999999999999-99831
Q gi|254780967|r  342 FGFINTVISTILGIIIG-QSFNG  363 (398)
Q Consensus       342 ~~~~~~~~~~~~~~~~g-~~~~~  363 (398)
                      ... .+..+...+|.++ .+...
T Consensus       408 ad~-a~sla~a~GP~~gg~iv~~  429 (464)
T KOG3764         408 ADA-AFSLAYAIGPTFGGSLVEA  429 (464)
T ss_pred             HHH-HHHHHHHCCCCCCCHHEEE
T ss_conf             987-8787421156443011000


No 58 
>TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663   The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs .   This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane.
Probab=99.97  E-value=2.4e-28  Score=172.80  Aligned_cols=345  Identities=17%  Similarity=0.162  Sum_probs=221.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             65766999999999981999--------------------------8899999999999999999999999986508289
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLS--------------------------NENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKI   69 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s--------------------------~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~   69 (398)
                      ..+..+.-.++.+..++..+                          +.+.+ +.++.+.+|..++.++.|+++||+|||+
T Consensus        87 yDt~~i~~~~~~~~~~~~~~~~~~EVCW~~~~~~~~vn~c~~~~~~~~~~~-~~v~~~~~G~~~g~l~~g~~~~~~GRk~  165 (572)
T TIGR00879        87 YDTGVISGALALPAFEFKFTSAISEVCWLLSDGSQEVNECTGSYYSSSLWG-LVVSIFLVGGFIGALFAGWLSDRFGRKK  165 (572)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             347899999733354313666411032205888420126521588998899-9999999999999987556777533626


Q ss_pred             HHHHHHHHHHHHHHHHHCC---CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC
Q ss_conf             9999999999999985100---1101110022321001111111000123321000111122122331000111111111
Q gi|254780967|r   70 VMMFGLVIHIISTFIMVTI---NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI  146 (398)
Q Consensus        70 ~l~~g~~~~~i~~~~~~~a---~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i  146 (398)
                      -++++.+++.++.++...+   .++++++++|++.|+|.|......+.|++|..|++.|++..++.+....+|..++...
T Consensus       166 ~l~~~~~~~v~g~~~~~~~~~~~~~~~~~~gR~l~G~g~G~~s~~~P~Y~sE~AP~~lRG~~~~~~ql~~t~G~l~a~~~  245 (572)
T TIGR00879       166 SLLIVALLFVIGAILMGAAATALSVEMLIVGRVLLGIGVGIASALVPMYISEIAPKALRGALVSLYQLAITIGILVAYGF  245 (572)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             88999999999999999753102058899999999985318999899989733856557401257899999999999999


Q ss_pred             CC-------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC-------HHH-H-----------------------
Q ss_conf             12-------222111111014567888887777888761678864-------022-1-----------------------
Q gi|254780967|r  147 GQ-------ATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLD-------PRD-V-----------------------  188 (398)
Q Consensus       147 g~-------~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~-------~~~-~-----------------------  188 (398)
                      +.       .......+||+++....+...+..+. .+.+||+++       .++ .                       
T Consensus       246 ~~~~A~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~-~~~~PeSPrwLv~k~~~~~~A~~~L~~~~~~~~~~~~~~~~~~~  324 (572)
T TIGR00879       246 GYGLANSGTVSLNNTLGWRIPLGLQLIPAALLFLG-LFFLPESPRWLVEKGKVEEFARKSLARLRGTSSEDKEILDELEL  324 (572)
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99998766552123222215667778999999999-98731214667516765888899999754897424789999998


Q ss_pred             ----CCCCC---CCCCCCCCCCCCCCH-HHHHHHHHH----HHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHH
Q ss_conf             ----01111---112333100000000-025677788----763100146888765455431531-10158899886576
Q gi|254780967|r  189 ----RPLNL---YAILHSFSLIFKHRA-STLYNIANS----LTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVGGFAM  255 (398)
Q Consensus       189 ----~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  255 (398)
                          .+.+.   ++...+++...++|. .+.......    -...+.....+++|.++.+..-.+ +..-......+...
T Consensus       325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~l~~~qQ~~GiN~~~YY~~~if~~~G~~~~~~~~~~si~~g~~n  404 (572)
T TIGR00879       325 IDIARSIEKEQVNQSWGELFSLKRRKVERRRLFLGVVLQAFQQFTGINAIMYYSPTIFENAGVSTTDTAFLVSIIVGAVN  404 (572)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             87654565653254314666217852468899999999998764314514510679999717740235776678999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHH---HHHHHHHHHHHHHHHHCCCCC--------C-C-CHHHHHHHHHHHHHHHHHHHH
Q ss_conf             77889999985001565124688---778889999999987325777--------6-4-037998998999999999999
Q gi|254780967|r  256 SIASFINSRLVEKFGIRRVSHYS---LLIFFMITGSWLLVQITSNHP--------I-H-LLIFIAFFFLASFQFGLINSN  322 (398)
Q Consensus       256 ~~~~~~~~~l~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~-~-~~~~~~~~~~~~~~~~~~~~~  322 (398)
                      .+.++++-+++||+|||+....+   .....++...+..........        . . -...+.+..+..+.+.+...+
T Consensus       405 ~~~T~~a~~~vd~~GRr~~l~~G~~~~~~~~~~~~~~g~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~f~a~f~~g~gp  484 (572)
T TIGR00879       405 FIFTFVAIFLVDRFGRRPLLLIGGIEAAGMAICLFVLGILGASFVTGKGKAQDSSKSAAGNVAIVFILLFIAFFAMGWGP  484 (572)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999998443057889888899999999999986400100045665332156788889999999999997325235


Q ss_pred             -HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -9999985346-676999999999999999999999999983
Q gi|254780967|r  323 -FSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       323 -~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                       ...+..|.+| +.|+.++++....+.....+.+...-...+
T Consensus       485 ~~wv~~sE~Fp~~~R~~~~~~a~~~~w~~nf~~~~~fp~~~~  526 (572)
T TIGR00879       485 VPWVIVSEIFPLSVRPKAIAIAVAANWLANFLVGFLFPTMLE  526 (572)
T ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             888773126786551568999999999999999999887633


No 59 
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742   The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family.   Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.96  E-value=3.7e-29  Score=177.26  Aligned_cols=332  Identities=14%  Similarity=0.189  Sum_probs=216.7

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
Q ss_conf             99999999819998899999999999999999999999986508289999999999999998510011011100223210
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQG  102 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G  102 (398)
                      -.+.+++++||.++.|+. +.+++-++.-.+|.+..|-+.||+|||..+++++.++.++.+.|+++|||..+++.|.+.|
T Consensus        33 lv~a~~a~~f~~t~~d~a-~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~~~lfs~~~l~c~fap~y~~~~i~Rl~~G  111 (453)
T TIGR00891        33 LVLAEVAEEFDRTTKDVA-FLLSAVLIVRSVGALLFGLWADRVGRRLPLVTSVVLFSVATLLCAFAPTYEKLLIVRLVIG  111 (453)
T ss_pred             EEEECCHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             565010420068447899-9999999997588999988742255603788887999999975055760788999999996


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             0111111100012332100011112212233100011111111112222111-111014567888887777888761678
Q gi|254780967|r  103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFITLWYYIRFPE  181 (398)
Q Consensus       103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~~~~~~~~~pe  181 (398)
                      +|.|+.+..+.++.-|-.|.|+|++.-|++..+++.|.+++...-....... .+||+.|++ +++..+..+++-..+||
T Consensus       112 igMgG~yG~~aa~~iE~~P~~~R~~~SGll~sgya~G~~~A~~~y~~v~~~~g~~Wr~LF~~-sI~p~i~~l~~R~~~pE  190 (453)
T TIGR00891       112 IGMGGEYGLAAALAIEKVPAKLRSVLSGLLISGYAVGYVLAAVVYRVVVNFLGLSWRILFFL-SILPAILALFLRLRVPE  190 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHCCCCC
T ss_conf             44100466799899984038762233258888999999999999998887623258999999-99999999998503862


Q ss_pred             CCCHHHHCCCCCCCCCCCCCCCCCCCHH--------------------------------------------------HH
Q ss_conf             8640221011111123331000000000--------------------------------------------------25
Q gi|254780967|r  182 TLDPRDVRPLNLYAILHSFSLIFKHRAS--------------------------------------------------TL  211 (398)
Q Consensus       182 t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~  211 (398)
                      ++.-+++++.+ +..+...+++.+++..                                                  |.
T Consensus       191 ~e~w~~~~~~~-~l~~t~~~~~~gge~~~~~~~~~~~~~talWfCfaGnlqnaaivavlGllCaaifisfM~~~~~KrW~  269 (453)
T TIGR00891       191 AEVWKKALKAK-KLVKTRVDKVLGGEALVKAIVKTKAVATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMKRSVQKRWL  269 (453)
T ss_pred             CHHHHHHHHCC-CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf             06799998403-64166899862786027999999999999999884101368999999999999999998774031247


Q ss_pred             HH----HHHHHHHHCCHHHHHHHHHHHHHH--CC--CCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             67----778876310014688876545543--15--3110-158899886576778899999850015651246887788
Q gi|254780967|r  212 YN----IANSLTMGAILGFVNSSQQIYVGI--YQ--LGNL-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIF  282 (398)
Q Consensus       212 ~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~-~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~  282 (398)
                      ..    +.....+..-..-....|+++...  ++  +++. .....-...++.++|+.+.|.+.|++++|+....++.. 
T Consensus       270 ~fvyLvvl~~~~n~~sh~~QdllPT~L~a~tdhGlgls~~tv~~ivv~~niGAi~Gg~~fG~l~~~~grR~~~v~~~~~-  348 (453)
T TIGR00891       270 LFVYLVVLLVAANYLSHAIQDLLPTYLKADTDHGLGLSKDTVAVIVVVSNIGAIVGGLVFGTLSEVLGRRLALVIALLL-  348 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH-
T ss_conf             8999999999988752104553220121354201345731416877872624687755302155666689999999986-


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999987325777640379989-989999999999999999985346-6769999999999999999999999999
Q gi|254780967|r  283 FMITGSWLLVQITSNHPIHLLIFIAF-FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQS  360 (398)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~  360 (398)
                          +.+...+.........+++... ++..-...| +.........|..| +.|+...++..-+++..++..+++-..+
T Consensus       349 ----g~l~i~P~Fa~~G~~~a~Lglg~F~~q~~vqG-~wGilP~hl~e~~p~d~Ra~~~G~tYqlGnL~~A~a~~I~~~l  423 (453)
T TIGR00891       349 ----GQLLIVPVFALSGAEAAVLGLGLFLLQVLVQG-VWGILPKHLAELAPADARAVVAGLTYQLGNLAAALASIIEERL  423 (453)
T ss_pred             ----CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             ----01233025652141799999999999998415-7655798860459033246443631457778987623788875


Q ss_pred             HHH
Q ss_conf             831
Q gi|254780967|r  361 FNG  363 (398)
Q Consensus       361 ~~~  363 (398)
                      .|.
T Consensus       424 A~r  426 (453)
T TIGR00891       424 AER  426 (453)
T ss_pred             HHH
T ss_conf             631


No 60 
>KOG2615 consensus
Probab=99.96  E-value=3.7e-27  Score=166.24  Aligned_cols=316  Identities=18%  Similarity=0.203  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99999999999999999999999986508289999999999999998510011011100223210011111110001233
Q gi|254780967|r   38 NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIR  117 (398)
Q Consensus        38 ~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~  117 (398)
                      -.+..+-|.|.+...+.++.+|.++||+|||++++.|+...++..++.+.++|+..+..+|++.|+..|-.. ...++++
T Consensus        68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~-v~rAiis  146 (451)
T KOG2615          68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLS-VIRAIIS  146 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHHHHH
T ss_conf             012247658999999766554225665076189999999999999999988879999999986355067569-9999998


Q ss_pred             HHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC---CCCCCCHHHHH----HHHHHHHHHHHHHHHCCCCCCHHHHCC
Q ss_conf             21000111122122331000111111111122221---11111014567----888887777888761678864022101
Q gi|254780967|r  118 DIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA---LSGGWIGIFVC----MGVITTFITLWYYIRFPETLDPRDVRP  190 (398)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~---~~~gWr~~f~~----~~~~~~~~~~~~~~~~pet~~~~~~~~  190 (398)
                      |.+++|+|++.++.++.++++|.++||++|+.+..   ...  +.+|..    ..++.........+++|||.|.+++.+
T Consensus       147 dV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g--~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~  224 (451)
T KOG2615         147 DVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG--SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRND  224 (451)
T ss_pred             HHCCHHHCCCEEEEEEHHHHCCHHHCCHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
T ss_conf             62585431531244104543031101045667876476524--6806789999999999889988885775564043124


Q ss_pred             CCC--CCCCC------CC-----CCCCCCCHHHHHHHH---HH---HHHHCCHHH-HHHHHHHHHHHCCCC-CCHHHHHH
Q ss_conf             111--11233------31-----000000000256777---88---763100146-888765455431531-10158899
Q gi|254780967|r  191 LNL--YAILH------SF-----SLIFKHRASTLYNIA---NS---LTMGAILGF-VNSSQQIYVGIYQLG-NLFPIAFA  249 (398)
Q Consensus       191 ~~~--~~~~~------~~-----~~~~~~~~~~~~~~~---~~---~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~  249 (398)
                      .+.  .+...      +.     ...++|+........   .+   +.+...+.. .+..+.+..+.++.+ .+.+-.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~  304 (451)
T KOG2615         225 EHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLS  304 (451)
T ss_pred             CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEE
T ss_conf             43555444212666246366555565228531006999999999999999999999753787604766877235214520


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88657677889999985001565124688778889999999987325777640379989989999999999999999985
Q gi|254780967|r  250 VGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME  329 (398)
Q Consensus       250 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (398)
                      ..++.+.+......+..+|.... ...........+.-..++...   .... ........+..+..+...+..+.+...
T Consensus       305 ~tGl~m~~~ql~~~~~l~~~~~~-~~a~l~~~l~~~vP~~llls~---~~~~-~~l~~~s~l~sf~~A~~vt~Lt~Lv~~  379 (451)
T KOG2615         305 TTGLLMLVIQLALVPILPRYKGN-IKAVLLFSLLLIVPAFLLLSL---ARTP-VVLYLGSTLKSFSTASVVTCLTSLVHK  379 (451)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHC---CCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             00089998787401244533464-056799999999999999804---6653-012289999999988766889999974


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             346-67699999999999999999999999998
Q gi|254780967|r  330 PFS-HLAGTASSIFGFINTVISTILGIIIGQSF  361 (398)
Q Consensus       330 ~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~  361 (398)
                      ..| +++|+++++....+...-++++.+-|...
T Consensus       380 ~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~  412 (451)
T KOG2615         380 YGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF  412 (451)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_conf             078110057888999899999986003221057


No 61 
>KOG0569 consensus
Probab=99.96  E-value=4.9e-26  Score=160.05  Aligned_cols=362  Identities=16%  Similarity=0.148  Sum_probs=213.2

Q ss_pred             HHHC--CCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HCCCCHHHHCCCCCCC
Q ss_conf             9819--99889999---99999999999999999999865082899999999999999985---1001101110022321
Q gi|254780967|r   30 DSLH--LSNENYGQ---HLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM---VTINSFTGMLCMRLIQ  101 (398)
Q Consensus        30 ~~l~--~s~~~~~~---~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~---~~a~~~~~l~~~r~l~  101 (398)
                      +.++  .|+++...   ...+.|.+|..+|++..|.++||+|||+.++.+.++..++.++.   ..++++++++++|++.
T Consensus        47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~  126 (485)
T KOG0569          47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV  126 (485)
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             84599998679999999999999999999999899998731626789999999999999999998851589999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             001111111000123321000111122122331000111111111122-2211111101456788888777788876167
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQA-TVALSGGWIGIFVCMGVITTFITLWYYIRFP  180 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~-l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~p  180 (398)
                      |+..+.......-++.|..|.+.||..-...+.+..+|..++..+|.- ++.....|++.+....+..++..+ ...++|
T Consensus       127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~P  205 (485)
T KOG0569         127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLP  205 (485)
T ss_pred             HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH-HHHCCC
T ss_conf             9986898868889985059053012788999999999999999973387559975259999989999999999-995379


Q ss_pred             CCCCH-------HH--------------------------HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----HHHC
Q ss_conf             88640-------22--------------------------1011111123331000000000256777887-----6310
Q gi|254780967|r  181 ETLDP-------RD--------------------------VRPLNLYAILHSFSLIFKHRASTLYNIANSL-----TMGA  222 (398)
Q Consensus       181 et~~~-------~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  222 (398)
                      |+++-       ++                          +++...++...+.++++++|..+........     .+.+
T Consensus       206 ESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sG  285 (485)
T KOG0569         206 ESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSG  285 (485)
T ss_pred             CCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             99606989759799999999998299862467999999999851255467859999668014679999999999998447


Q ss_pred             CHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-C
Q ss_conf             01468887654554315311-015889988657677889999985001565124688778889999999987325777-6
Q gi|254780967|r  223 ILGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP-I  300 (398)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  300 (398)
                      ......++..++.+. +.+. .........+....+.++++..++||.|||+....+..........+.......... .
T Consensus       286 i~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~  364 (485)
T KOG0569         286 INAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGS  364 (485)
T ss_pred             CCEEHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             201077999999986-9987888999999999999999999999971498689999999999999999999999998666


Q ss_pred             CCH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf             403-7998998999999999-9999999985346-676999999999999999999999999983117-99999999999
Q gi|254780967|r  301 HLL-IFIAFFFLASFQFGLI-NSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPITIGFFGIA  376 (398)
Q Consensus       301 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~  376 (398)
                      +.. ..+...+.....+++- .|...-...|..| +.|..+.+.....+.....+.+...-.+.+..+ +.+......+.
T Consensus       365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~  444 (485)
T KOG0569         365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLA  444 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             99999999999999753147776117888974795406899999999999999999998999998734365389899999


Q ss_pred             HHHHHHHHHHHCCHHHH
Q ss_conf             99999999994220003
Q gi|254780967|r  377 VSSFICILIVEKNQMFR  393 (398)
Q Consensus       377 ~~~~~~~~~~~~~~~~r  393 (398)
                      .........+++.|-+.
T Consensus       445 ~~~i~~y~~lPETkgr~  461 (485)
T KOG0569         445 IFLIYLYRYLPETKGRT  461 (485)
T ss_pred             HHHHHHHHHCCCCCCCC
T ss_conf             99999999596769999


No 62 
>TIGR00892 2A0113 monocarboxylate transporter; InterPro: IPR004743 Proton-linked monocarboxylate transporters catalyse the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.; GO: 0015355 secondary active monocarboxylate transmembrane transporter activity, 0015711 organic anion transport, 0016021 integral to membrane.
Probab=99.96  E-value=3.9e-27  Score=166.11  Aligned_cols=352  Identities=14%  Similarity=0.149  Sum_probs=241.6

Q ss_pred             HHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             8999999999988-6576-6999999999981999889999999999999999999999998650828999999999999
Q gi|254780967|r    3 FVIVIAMLMAINS-LGID-IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII   80 (398)
Q Consensus         3 ~i~~l~~~~~~~~-~~~~-~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i   80 (398)
                      |+++.+++...+. .+.. .+..-+.+|++||+.|+++++ |+.|+.+..+=-+.|+...|.+|||-|+++++|-++.+.
T Consensus        25 WvVl~a~fv~~GfsYaFPkav~VFF~El~~~F~a~~Se~a-WiSSImLAvlY~~GP~sSiLVn~fG~RPv~~~GGlLas~  103 (475)
T TIGR00892        25 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETA-WISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL  103 (475)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCH-HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             8998899998765202365451124888886178976202-576899999866698334556787845999987999866


Q ss_pred             HHHHHHCCCCHHHHCCC-CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             99985100110111002-23210011111110001233210001111221223310001111111111222211111101
Q gi|254780967|r   81 STFIMVTINSFTGMLCM-RLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIG  159 (398)
Q Consensus        81 ~~~~~~~a~~~~~l~~~-r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~  159 (398)
                      |.++..|++|+.+|+.. -++.|+|.+.-.-.+.+++..+|. +||.-|+++..++..+.-..=++++..+ -+.+|||.
T Consensus       104 GmilASFs~~~~eLYlT~G~itGLGlAfnlqPsLt~lG~YF~-rrRPLANGLA~aGsPvFLS~L~Pl~q~L-~~~fGWrG  181 (475)
T TIGR00892       104 GMILASFSSNVLELYLTAGFITGLGLAFNLQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYL-FESFGWRG  181 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHCCCCHHHHHHHHHHHHH-HHHCCCCH
T ss_conf             899999864799999998888878898732046877323245-4453578888617623787656788998-76158504


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCC--HHH-HCCCCCCC---------------------CCCC-----CCCCCCC-CHH
Q ss_conf             4567888887777888761678864--022-10111111---------------------2333-----1000000-000
Q gi|254780967|r  160 IFVCMGVITTFITLWYYIRFPETLD--PRD-VRPLNLYA---------------------ILHS-----FSLIFKH-RAS  209 (398)
Q Consensus       160 ~f~~~~~~~~~~~~~~~~~~pet~~--~~~-~~~~~~~~---------------------~~~~-----~~~~~~~-~~~  209 (398)
                      .|++++.+-+=+.+.-.+.-|-...  +++ +.|+..++                     ..+.     -..+++| |.|
T Consensus       182 ~FLilGGllLhcC~aGa~mRP~~~~~~~~k~~~K~~~~~~~~S~~~~~~~~g~~~~~k~~~~~~~~~~LDf~~f~hnrGF  261 (475)
T TIGR00892       182 SFLILGGLLLHCCVAGALMRPVGPSQRQSKSKSKEGLPEDGKSDENIDLIDGTKKLSKKSTAEKINKFLDFSLFTHNRGF  261 (475)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf             78999999998776142106787887664322578888778640122114785102323568998887757764178723


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHC----CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             25677788763100146888765455431----53-11015889988657677889999985001565124688778889
Q gi|254780967|r  210 TLYNIANSLTMGAILGFVNSSQQIYVGIY----QL-GNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFM  284 (398)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~  284 (398)
                      ..+.........+++.     |.++...|    +. ++..+.+.++.++.-++..+..|.+..+---|.....-.....+
T Consensus       262 ~vY~~g~~~~~LGlF~-----P~ifL~pYAkd~gv~~~~AAfLLSi~gF~DifaRP~~Gl~Ag~~~~rP~~~YlFS~A~l  336 (475)
T TIGR00892       262 LVYLSGNVIMFLGLFV-----PIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSVGLIAGLKLIRPRVQYLFSLALL  336 (475)
T ss_pred             EEHHHHHHHHHHHCCC-----HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             6227889999972011-----03334752125689767789999999998888866668761752201146789999999


Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999987325777640379989989999999999999999985346-6769999999999999999999999999831
Q gi|254780967|r  285 ITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNG  363 (398)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~  363 (398)
                      ..+..=++   .........++......+.+++.+........||..+ ++=.+|-++...+.-.---++||+.|.+.|.
T Consensus       337 ~nGlt~L~---ca~a~~Y~~LV~y~~~FG~sfG~vgal~Fe~LMd~VG~~rFssA~GLvt~ve~~avL~GPPlAG~L~D~  413 (475)
T TIGR00892       337 FNGLTHLL---CALASDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA  413 (475)
T ss_pred             HHHHHHHH---HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             85178886---130137401125777897688889999999987305874451578899999534653286236788566


Q ss_pred             HH
Q ss_conf             17
Q gi|254780967|r  364 TT  365 (398)
Q Consensus       364 ~~  365 (398)
                      +.
T Consensus       414 ~~  415 (475)
T TIGR00892       414 TK  415 (475)
T ss_pred             HC
T ss_conf             44


No 63 
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96  E-value=2.5e-25  Score=156.11  Aligned_cols=373  Identities=13%  Similarity=0.128  Sum_probs=234.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH-HHHHHHHHHHHHHHHHCC-
Q ss_conf             65766999999999981999889999999999999999999999998650-----82899-999999999999985100-
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIV-MMFGLVIHIISTFIMVTI-   88 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i~~~~~~~a-   88 (398)
                      +........+|.+-+|-|+|.+++| + .+...+.+.+ .++++++.||+     ||||- ++.......+.....++. 
T Consensus        13 lP~~~~~~~l~~~Lr~~Gvsl~~IG-l-~~ll~LPw~l-KfLWAP~vDr~~~p~lG~rR~Wil~~Q~~l~~~l~~la~~~   89 (402)
T PRK11902         13 LPLALTSGTLQAWMTVEGLDIQTIG-F-FSLVGQAYIF-KFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIMAMAFLP   89 (402)
T ss_pred             CHHHHHHHHHHHHHHHCCCCHHHHH-H-HHHHHHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             4399999999999988799889999-9-9999999999-99998888640776688740799999999999999998079


Q ss_pred             --CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             --110111002232100111111100012332100011112212233100011111111112222111111014567888
Q gi|254780967|r   89 --NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGV  166 (398)
Q Consensus        89 --~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~  166 (398)
                        +|++.+...-++..+..+....+..++-.|..+++||+..++....+..+|.+++....-.+.+...||+..|...+.
T Consensus        90 p~~~~~~l~~~~~l~af~sAtqDIA~Da~~ie~l~~~e~g~~n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~~~~~~la~  169 (402)
T PRK11902         90 PHSALWPLALLAVLVAFLSASQDIVFDAYSTDVLRPEERGAGAAVKVLGYRLAMLVSGGLALILADRVLGWGNTYLLMAG  169 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             66679999999999999999999999899998559988999999999999999999899999999988869999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHCCCC-CCH
Q ss_conf             88777788876167886402210111111233310000000002567778876310-0146888765455431531-101
Q gi|254780967|r  167 ITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGA-ILGFVNSSQQIYVGIYQLG-NLF  244 (398)
Q Consensus       167 ~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~  244 (398)
                      +..+..+.. ++.||+.++++.++...+...+.+++.+++|..+.......+.-.+ ........|++ .+..+.+ ++.
T Consensus       170 l~ll~~~~~-l~~~e~~~~~~~~~~~~~~~~~~~~~f~~r~~~~~~l~fillyrlgd~~~~~m~~pFl-l~dlG~s~~~i  247 (402)
T PRK11902        170 LMLAGALTT-LWAPEPEVPARAPRSLGEAVVGPLRDFFSRRGAWWLLLLIVLYKLGDAFAGSLSTTFL-IRGAGFSAGEV  247 (402)
T ss_pred             HHHHHHHHH-HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHH
T ss_conf             999999999-9288877544241037899999999999726799999999999989999999878999-97529999999


Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             588998865-7677889999985001565124688778889999999987325777640379989989999999999999
Q gi|254780967|r  245 PIAFAVGGF-AMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF  323 (398)
Q Consensus       245 ~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (398)
                      +......+. +.++|+.+.|++.+|++.+|.....................   .+.+..........-.+..++.....
T Consensus       248 g~~~~~~G~~a~i~G~~lGG~l~~r~g~~~~L~~~~~~~~l~~l~~~~la~---~~~~~~~l~~~i~~~~~~~g~~~~a~  324 (402)
T PRK11902        248 GIVNKTLGLAATIVGALAGGSLMVRLGLYRSLMLFGVLQAVSNLGYWLLAV---TPKHLWLMGLAIGVENLCGGMGTAAF  324 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999879999999999999999999973899999999999999999999996---67757999999999999999999999


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             9999853-466769999999999999999999999999831179999999-999999999999994220003430
Q gi|254780967|r  324 SSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGF-FGIAVSSFICILIVEKNQMFRKTE  396 (398)
Q Consensus       324 ~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~  396 (398)
                      .+..++. .++..++-.++...+...++.+.+...|.+.|+..|+....+ ..+++.+...+.+.+|+-.++|+|
T Consensus       325 ~a~~m~l~~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~~Gy~~fFi~~~~~~ip~l~ll~~~~~~~~~~~~~  399 (402)
T PRK11902        325 VALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEALGWPGFYLGTVLIALPGLALLWLMRNTIDRYEAQ  399 (402)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999828866399999999999998999884399999981969999999999999999999988898876654


No 64 
>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734   Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=99.95  E-value=4.1e-29  Score=176.99  Aligned_cols=137  Identities=29%  Similarity=0.551  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHHHHHHH----HCCCHHHHHHHHHHHHHHHHHHHCC---CCHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             999999999999999986----5082899999999999999985100---110111002232100111111100012332
Q gi|254780967|r   46 FYLIGYGIAQIFYGPLSD----RFGRKIVMMFGLVIHIISTFIMVTI---NSFTGMLCMRLIQGIGGAAPRIITISIIRD  118 (398)
Q Consensus        46 ~~~~~~~i~~~~~G~l~D----r~Grr~~l~~g~~~~~i~~~~~~~a---~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~  118 (398)
                      .|.++|+++|++.|+++|    |+|||++++.|..++.++++.++++   +|+++++++|+++|++.+...+...++++|
T Consensus         2 ~~~~~yAl~q~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al~nPh~~~~~L~i~R~~~G~~~~~~~~~g~a~~aD   81 (148)
T TIGR00880         2 LLVAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFALSNPHSNITVLIISRFLQGFGAAAALVAGAALIAD   81 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             79999999999999999998842162899999999999999998844872379999999999999888999989888877


Q ss_pred             HHCCC-CCCCCCCCCCCEECCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             10001-11122122331000111111111122221--111110145678888877778887616788
Q gi|254780967|r  119 IYDGR-DMAKVLSIAMMIFMIMPILAPSIGQATVA--LSGGWIGIFVCMGVITTFITLWYYIRFPET  182 (398)
Q Consensus       119 ~~~~~-~~~~~~~~~~~~~~~g~~igp~ig~~l~~--~~~gWr~~f~~~~~~~~~~~~~~~~~~pet  182 (398)
                      .+|+| ||++++|+...+...|+++||.+|+.+..  +..+||++|++.++.+.+..+...+.+|||
T Consensus        82 ~~~~~~~~~~a~g~~~~~~~~g~~lgP~~G~~~~~~~~~~~wr~~F~~~~~~~~~~~~~~~~~~~eT  148 (148)
T TIGR00880        82 IYPPEEERSVALGLMSAGIALGPILGPPLGGVLANVKQALGWRAPFLILAALALAAFILLAFLLPET  148 (148)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             4264047889999999999999999999989998755401765899999999999999998860689


No 65 
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95  E-value=9.7e-24  Score=147.38  Aligned_cols=361  Identities=12%  Similarity=0.047  Sum_probs=235.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHH-HHHHHHCCCC
Q ss_conf             988657669999999999819998899999999999999999999999986508289-99999999999-9998510011
Q gi|254780967|r   13 INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKI-VMMFGLVIHII-STFIMVTINS   90 (398)
Q Consensus        13 ~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~g~~~~~i-~~~~~~~a~~   90 (398)
                      .-..+...+.|-+|..-++.|.|.+|+| .+.+.-.+...+.++++|+++||.++|+ .+........+ .......+++
T Consensus        15 ~~F~~~G~~~Pf~~l~L~~~G~s~~~IG-ii~a~~~~~~~v~~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   93 (383)
T PRK11128         15 GYFFAYGVFLPFWSVWLKGQGYTPETIG-LLLGAGLVFRFLGSLLIAPRVKDPSQLIPALRLLALLTLIFAVAFWFGAHS   93 (383)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999973898989999-999999999999988899998634434899999999999999999998768


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             01110022321001111111000123321000111122122331000111111111122221111110145678888877
Q gi|254780967|r   91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTF  170 (398)
Q Consensus        91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~  170 (398)
                      ++.+.+.-.+.++..+...|...++..++..+ + +...|..-.-.++|.+++..++|.+++. .|-+..++...... +
T Consensus        94 f~~~~~~~~l~~~~~~~~~pl~dsl~~~~~~~-~-~~~YG~iRlwGSiGf~~~~l~~G~l~~~-~g~~~i~~~~~~~~-~  169 (383)
T PRK11128         94 FWLMFVAIGLFNLFFSPLVPLTDALANTWQKQ-I-GLDYGKVRLWGSIAFVIGSALTGKLVSW-FGEQAILWILTAGV-A  169 (383)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHH-H
T ss_conf             99999999999999844763799999999655-4-5641588899889999999999999987-27017999999999-9


Q ss_pred             HHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             77888761678864022101111112333100000000025677788763100146888765455431531101588998
Q gi|254780967|r  171 ITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAV  250 (398)
Q Consensus       171 ~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (398)
                      ...+..+..|+..++++.++  .+....+.++++|||+++...+...+.....-.|.+..+.+.++....+...+.....
T Consensus       170 ~~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~llk~~~~~~fll~~~l~~~sh~~~y~F~~i~~~~~G~s~~~iG~lw~~  247 (383)
T PRK11128        170 SMLLGQLLRPTVMPQGESRQ--QESAGPAWLALLKEPTVWRFLLCVSLIQGSHAAYYSFSAIYWQAAGYSASTIGYLWSL  247 (383)
T ss_pred             HHHHHHHHCCCCCCCCCCCC--CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             99999996787786433323--4556520999870818999999999999998999999999999859967399999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86576778899999850015651246887788899999999873257776403799899899999999999999999853
Q gi|254780967|r  251 GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP  330 (398)
Q Consensus       251 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      ..+..+..-.+.+++.+|++.++....+.....+-..   .....    .+.+.......+-+..++........+..+.
T Consensus       248 ~v~aEI~~f~~~~rl~~r~g~~~ll~ia~~~~~lRw~---l~a~~----~~~~~~~~~QlLHg~tFg~~~~a~i~~i~~~  320 (383)
T PRK11128        248 GVVAEVLIFAFSKRLFRRWSARDLLLLSAVCGVIRWG---LMGST----TALPWLILVQILHCGTFAVCHLAAIRYIAAR  320 (383)
T ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH---HHHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999982989999999999999999---99986----0399999999999999999999999999856


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             466769999999999999-999999999999831179999999999999999999994220
Q gi|254780967|r  331 FSHLAGTASSIFGFINTV-ISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQ  390 (398)
Q Consensus       331 ~~~~~G~a~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (398)
                      .++.+.++.++++...+. ++.++..+.|.++|+...   ..+..++++++.++++..|+-
T Consensus       321 ~~~~~~~~Q~ly~~~~~Glg~~ig~~~~G~ly~~~G~---~~f~~ma~~al~~l~l~~~~~  378 (383)
T PRK11128        321 PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALIALPALFIRPKVV  378 (383)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHCCCC
T ss_conf             9422789999999999889999999999999998567---899999999999797500145


No 66 
>TIGR00899 2A0120 sugar efflux transporter; InterPro: IPR004750   This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both Gram-negative and Gram-positive bacteria.; GO: 0015542 sugar efflux transmembrane transporter activity, 0008643 carbohydrate transport, 0016021 integral to membrane.
Probab=99.95  E-value=4.6e-24  Score=149.16  Aligned_cols=354  Identities=13%  Similarity=0.174  Sum_probs=250.8

Q ss_pred             HHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             657669999999-9998199988999999999999999999999999865082-89999999999999998510011011
Q gi|254780967|r   16 LGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGR-KIVMMFGLVIHIISTFIMVTINSFTG   93 (398)
Q Consensus        16 ~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~g~~~~~i~~~~~~~a~~~~~   93 (398)
                      ++-..-.|.+.. +++|.+.++..+| +..|...+.-...+.+.+.-|||-|. |+.++.++++.+..+.+.++..||-.
T Consensus        11 ~Agalq~PtLS~fL~~E~~~~p~~vG-~f~t~~ai~gi~vs~~la~~sD~~gdr~~Lil~cclla~l~~~lfA~nr~Y~~   89 (377)
T TIGR00899        11 IAGALQTPTLSLFLSEEVRARPAMVG-LFYTGSAIVGILVSQLLATRSDKQGDRKKLILFCCLLAVLACLLFAWNRNYFV   89 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHEH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf             99998768999999887502851111-43455589999999999861113477189999999999999999998500688


Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC--CCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             10022321001111111000123321000111122--1223310001111111111222211111101456788888777
Q gi|254780967|r   94 MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKV--LSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI  171 (398)
Q Consensus        94 l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~--~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~  171 (398)
                      ++..-++..--.+...|-..++..|+.+++-|...  .+..-.-.+++.++||++. +.+..+++....|...++.-+.+
T Consensus        90 l~~~gVLLss~~sta~Pq~faLarehad~~gr~~vMFss~~Raq~SLawvigpp~a-~~La~~~~F~vmf~~aa~~f~~~  168 (377)
T TIGR00899        90 LLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVLRAQISLAWVIGPPLA-FALALGFGFTVMFLAAAVAFVLC  168 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999978867516889999998665227612789999999999999999999-99874202899999999999999


Q ss_pred             HHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHH
Q ss_conf             78887616788640221011111123331000000000256777887631001468887654554315311-01588998
Q gi|254780967|r  172 TLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAV  250 (398)
Q Consensus       172 ~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  250 (398)
                      .++.++.+|.-++.+.....+     .+.+...++|+++....++.+.++.-.-|....|.+..+..+.++ ..|..++.
T Consensus       169 ~~l~~~~LPs~~~~~~~~~~~-----~~~~g~~~~r~~rLLfv~~~Lmw~~n~ly~i~mpl~li~EL~l~~kl~G~~~g~  243 (377)
T TIGR00899       169 GVLVWLLLPSVPRGAPGATTT-----LEVRGRLARRDTRLLFVACTLMWGCNILYIINMPLFLINELGLPDKLAGLMMGT  243 (377)
T ss_pred             HHHHHHHCCCCCCCCCHHCCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999998677310001001000-----014774323542799999999975047888522789998625841899999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86576778899999850015651246887788899999999873257776403799899899999999999999999853
Q gi|254780967|r  251 GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP  330 (398)
Q Consensus       251 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      .+-..+..-.+.|++.+|+|+|+....+...     +..........+  +.+.......+.+...|+..+....+.+|.
T Consensus       244 AAGlEiP~M~~Agy~~~R~Gkr~Lm~~A~~~-----g~~fy~~~~~~~--~~~~~~~lq~lna~fiGi~~g~gmlYfqdL  316 (377)
T TIGR00899       244 AAGLEIPFMLLAGYLIKRLGKRRLMLLAVVA-----GVAFYTGLLLAN--SLWALLMLQLLNAIFIGILAGIGMLYFQDL  316 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7655647999977888887589999999999-----999999998516--289999999999999999998899999862


Q ss_pred             HHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             466769-99999999999-99999999999998311799999999999999999999
Q gi|254780967|r  331 FSHLAG-TASSIFGFINT-VISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILI  385 (398)
Q Consensus       331 ~~~~~G-~a~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (398)
                      .|++.| +|..+++.... .|..+.+.+-|.+.+  .|.....+....++..+..+.
T Consensus       317 mP~~~gs~AttLy~n~~~G~G~i~ag~v~G~~~e--~W~~~Avy~~~~~~~~~a~~~  371 (377)
T TIGR00899       317 MPGRAGSAATTLYTNTSRGVGWIIAGSVAGILAE--IWSYHAVYWFAIVMLIVALLV  371 (377)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_conf             7314458999999875213899999988669888--755799999999999999999


No 67 
>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=99.95  E-value=1.1e-23  Score=147.15  Aligned_cols=352  Identities=13%  Similarity=0.077  Sum_probs=212.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHH-H
Q ss_conf             9999999886576699999999998-1999889999999999999999999999998650828999999999--9999-9
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI--HIIS-T   82 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~--~~i~-~   82 (398)
                      +.....+-.++.+++.|-+|..-+| .|.|..|+| .+.|...+...+.|+++|.++||.|.||-++.....  ...+ .
T Consensus        12 ls~~yf~yF~~~g~~~pf~~lwL~~~~Gls~~~IG-il~s~~~~~~il~qp~~G~lsDk~g~rk~ll~~i~~~l~l~~~f   90 (413)
T pfam01306        12 FGLFFFFYFFIMSAYFPFFPIWLHDVNHLSKTDTG-IVFSCISLFSILFQPLFGLISDKLGLRKHLLWCITGLLVLFAPF   90 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999998999997775798999999-99999999999982789986034455018999999999999999


Q ss_pred             HHHHCCC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9851001----1011-1002232100111111100012332100011112212233100011111111112222111111
Q gi|254780967|r   83 FIMVTIN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW  157 (398)
Q Consensus        83 ~~~~~a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW  157 (398)
                      ....+.|    |++. .++.-+..++..+...|...+++.++..  +.+.-.|..-.-.++|.+++..++|.+.+..  -
T Consensus        91 fi~~~~pll~~~~~l~~lv~~i~~~~~~~~~~pl~ea~~~~~sr--~~~~~YGriRlwGSiGfai~a~~~G~l~~~~--p  166 (413)
T pfam01306        91 FIYVFGPLLQSNILVGAIVGGVYLGFVFSAGAGAIEAYIEKVSR--RSNFEYGKARMFGCVGWALCASIAGILFSID--P  166 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--C
T ss_conf             99999789899999999999999999985542799999999987--6377421368899999999999867887528--5


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH----HHHH
Q ss_conf             014567888887777888761678864022101----11111233310000000002567778876310014----6888
Q gi|254780967|r  158 IGIFVCMGVITTFITLWYYIRFPETLDPRDVRP----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILG----FVNS  229 (398)
Q Consensus       158 r~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  229 (398)
                      +..|+......++..++.+...||..++.+..+    .+.....++..+++|+|++|...+........+..    |...
T Consensus       167 ~~~f~~~s~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~v~g~~~~y~v~d~~f~~f  246 (413)
T pfam01306       167 QIVFWLGSGFALILALLLMFAKPDKSSSAIVADALGANKSAFSLRLALELFRMPKFWVFVLYVVGVACVYDVFDQQFANF  246 (413)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             28999999999999999998078764102331010124577647779999615479999999999999988777778999


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             76545543153110158899886576778899999850015651246887788899999999873257776403799899
Q gi|254780967|r  230 SQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF  309 (398)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
                      ...++.+....++..+...+...+.....-.+.+++.+|+|.|+....+..+..+-..   ...    ...+.+.....-
T Consensus       247 ~~~~~~~~~~g~~~~G~l~s~~v~~E~~~m~~~~~l~~R~G~k~~Llla~~i~~iR~~---~~~----~~~~~~~ii~~q  319 (413)
T pfam01306       247 FTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIL---GSS----FATTALEVVILK  319 (413)
T ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHH----CCCCHHHHHHHH
T ss_conf             9999634276843121999999999999999989999870839899999999999999---974----323069999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999999999999985346-6769999999999-9999999999999998311799999
Q gi|254780967|r  310 FLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFI-NTVISTILGIIIGQSFNGTTYPITI  370 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~  370 (398)
                      .+-+...+........+..+..| |.++++..+...+ ...++.+.++..|.++|..++....
T Consensus       320 lLH~~t~~l~~va~~kyI~~~f~~rl~aT~~~v~~~~~~g~~~~i~s~~~G~l~D~~G~~~ty  382 (413)
T pfam01306       320 MLHMFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFSKQLAMILLSTLAGIMYDSIGFQGAY  382 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999989999999999999986793022149999999999888998611288899970378999


No 68 
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267    This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=99.94  E-value=8.5e-26  Score=158.72  Aligned_cols=362  Identities=16%  Similarity=0.216  Sum_probs=255.3

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCHHHHCCCC
Q ss_conf             999999998199988999999999999999999999999865082899999999999999985100----1101110022
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI----NSFTGMLCMR   98 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a----~~~~~l~~~r   98 (398)
                      -++|.+.|+=-.|.++.| ++.|.-.++|+++.++.|.+|||-++|--+-.|+++.++..++..+.    +++..+.+.-
T Consensus        50 lA~PyL~~~GlfSk~eLG-~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~v~~l~~~~PW~TSsiaiMfv~~  128 (468)
T TIGR00712        50 LAIPYLVEQGLFSKAELG-LVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAIVMLLMGLVPWATSSIAIMFVLL  128 (468)
T ss_pred             HCCCHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             327056755752103578-9999999986456788603556767216877889999999999842140357999999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC---CCCCC--------CCCCCCCHHHHHHHHH
Q ss_conf             321001111111000123321000111122122331000111111111---12222--------1111110145678888
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI---GQATV--------ALSGGWIGIFVCMGVI  167 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i---g~~l~--------~~~~gWr~~f~~~~~~  167 (398)
                      |+.|=..|+.+|++-..+.+|++.+||+..+|+.+.+-++|..+-+.+   |..+.        .....|+..++.-+++
T Consensus       129 Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~Lg~A~F~~~~g~ea~akd~W~~~ly~Pa~~  208 (468)
T TIGR00712       129 FLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVLLGIAIFVSTHGIEAQAKDTWKSALYFPAII  208 (468)
T ss_pred             HHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             98211048879885442000002357786257621520025305899999999998752010022356678876447999


Q ss_pred             HHHHHHHHHHHCCCCCC---------------HHHHCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
Q ss_conf             87777888761678864---------------022101-----1111123331000000000256777887631001468
Q gi|254780967|r  168 TTFITLWYYIRFPETLD---------------PRDVRP-----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV  227 (398)
Q Consensus       168 ~~~~~~~~~~~~pet~~---------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (398)
                      +.+..+..+..++||+.               ++..++     ...|+.  -...+++||-.|-.+++..+.+..-++.+
T Consensus       209 Aii~a~~~~~~~RDTPQSCGLP~IE~yrNDYP~~~~~~~~E~eLTaK~I--~~~YVL~NKlLWYIA~ANVFVYl~RYGvl  286 (468)
T TIGR00712       209 AIIVALLVFLLMRDTPQSCGLPPIEEYRNDYPDDYNEKTAEKELTAKEI--FVQYVLKNKLLWYIAIANVFVYLVRYGVL  286 (468)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999988761787788668820015788234541001210147777--77776500478999999999888764010


Q ss_pred             HHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--------
Q ss_conf             887654554315311-01588998865767788999998500156512468877888999999998732577--------
Q gi|254780967|r  228 NSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH--------  298 (398)
Q Consensus       228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  298 (398)
                      .++|.++.|..+.+. ...+.+.+.-.+.+.|++++||++||+-+.|....+...........+..-..+..        
T Consensus       287 ~WsP~YL~EvK~F~~~~s~WaY~lYEyAgiPGTlLCGW~SDk~Fkg~Rg~~Gv~FM~lv~~Av~vYW~NPAgpeaela~y  366 (468)
T TIGR00712       287 DWSPTYLKEVKHFSLEDSAWAYFLYEYAGIPGTLLCGWVSDKVFKGKRGATGVLFMILVTIAVVVYWLNPAGPEAELANY  366 (468)
T ss_pred             CCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             23621465411457676514667767642641000212430000246420578999999999888743799740356654


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Q ss_conf             ------7640379989989999999999999999985346-676999999999999999999-9999999831179999-
Q gi|254780967|r  299 ------PIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTIL-GIIIGQSFNGTTYPIT-  369 (398)
Q Consensus       299 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-  369 (398)
                            |....-.+....++..-.|-++ ..-..++|..| |.+|||.++.+..+++||.+. ..++|...|...|.=. 
T Consensus       367 ~awyeNPy~lvD~i~~~~IGFLIYGPVM-LIGL~AleLAPKKAAGTAAG~TGlFGYlGGsv~A~Ai~G~~v~~f~WdGGF  445 (468)
T TIGR00712       367 SAWYENPYQLVDFILLIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGFVVDRFGWDGGF  445 (468)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
T ss_conf             5552270578989999998888754799-998889740674011121003455553335764555531232201268653


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999942
Q gi|254780967|r  370 IGFFGIAVSSFICILIVEK  388 (398)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~  388 (398)
                      ..+..-++++++.+.++..
T Consensus       446 ~v~Igg~iLAv~lL~~v~~  464 (468)
T TIGR00712       446 IVLIGGSILAVVLLLVVMV  464 (468)
T ss_pred             EEEHHHHHHHHHHHHHHHH
T ss_conf             6532457999999999872


No 69 
>PRK11195 major facilitator family transporter; Provisional
Probab=99.94  E-value=2.5e-24  Score=150.60  Aligned_cols=371  Identities=13%  Similarity=0.100  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999886576699999999998199988999999999999999999999999865082899999999999999985100
Q gi|254780967|r    9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI   88 (398)
Q Consensus         9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a   88 (398)
                      ..-++++++-+.+.-++-...++.+.++.... +....|.+.|.+.+.+.|.++||+.+++++.+.-.+-.++.+...+.
T Consensus        10 ~tQfl~AfnDN~ll~~~i~ll~~~~~~~~~~~-ll~~~FiLPfvLfsa~aG~lADr~~K~~vm~~~~~iki~~~~~~~~g   88 (415)
T PRK11195         10 AAQFFSALADNALLFAAIALLKELHAPDWSQP-LLQMVFVLAYVLLAPFVGAFADSFPKGRVMFIANGIKLAGCLLMLFG   88 (415)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999687789999999999996558189999-99999999999997647787661532899999999999999999999


Q ss_pred             CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC---------H
Q ss_conf             1101110022321001111111000123321000111122122331000111111111122221111110---------1
Q gi|254780967|r   89 NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI---------G  159 (398)
Q Consensus        89 ~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr---------~  159 (398)
                      .+.   +....+.|++.+...|.-++++.|..++||..++++++++...++.++|..+|+.+.+...+..         .
T Consensus        89 ~~~---ll~~~l~g~~sA~f~PaKYgiLpell~~~~L~~aNglve~~T~~AILlGti~gg~L~~~~~~~~~~~~~~~~~~  165 (415)
T PRK11195         89 AHP---LLAYGLVGLGAAAYSPAKYGILTELLPGDKLVKANGWIEGSTIAAILLGTVLGGVLADPHVASHLLAHLPLIDT  165 (415)
T ss_pred             HHH---HHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH
T ss_conf             999---99999999988984509987899875940205666299999999999999999999733100013201101011


Q ss_pred             HH----HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             45----67888887777888761678864022101111----11233310000000002567778876310014688876
Q gi|254780967|r  160 IF----VCMGVITTFITLWYYIRFPETLDPRDVRPLNL----YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQ  231 (398)
Q Consensus       160 ~f----~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (398)
                      ..    .+......+ ..+.-+.+|++.+++++.+.+.    ++..+..+.+++||..+...+...+.++.--++....|
T Consensus       166 ~~~~a~~vv~~~~~l-a~~~sl~IP~~~a~~~~~~~~~~~l~~~~~~~~~~L~~~~~~~~sllg~s~FW~vga~l~~~~~  244 (415)
T PRK11195        166 PAEAALAVIALAYAL-AALANLFIPDTGARYPGQSWNPIALTRDFADACRVLWRDKLGQISLAVTTLFWGAGATLRFLVL  244 (415)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             599999999999999-9999676999997677777787789999999999998673999999999999999999999899


Q ss_pred             HHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf             54554315311-01588998865767788999998500156512468877888999999998732577764037998998
Q gi|254780967|r  232 QIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFF  310 (398)
Q Consensus       232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (398)
                      .+-.+..+.++ ..+...+..+++..+|+.+++++.++....+....+... .+  ... .....  +  +.+.....+.
T Consensus       245 ~~a~~~Lg~~~~~~~~Lla~~avGIaiGs~la~~l~~~~~~~~~lP~Gi~m-g~--~v~-~~~~~--~--~~~~a~~ll~  316 (415)
T PRK11195        245 KWAPVALGIDLSTAAYLQAVVAIGIAVGAGAAARLVPLRTVLRVLPAGILM-GV--VVI-LMALQ--H--SLLPAYPLLI  316 (415)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHH-HH--HHH-HHHHH--H--HHHHHHHHHH
T ss_conf             999998599688999999999999999999999993797220632299999-99--999-99986--0--0799999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999999999999999853466--7699999999999999999999999998311799999999999999999999942
Q gi|254780967|r  311 LASFQFGLINSNFSSISMEPFSH--LAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEK  388 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~--~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (398)
                      +.+...|+...+.++..++..|+  ++|+.-+..|..++..-.+...+.+.... -..+....+...++..........|
T Consensus       317 llG~~gG~fvVPLnAliQ~r~~~~~~aGr~iA~qN~~~n~~m~~~~~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~  395 (415)
T PRK11195        317 LIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK-LGVPVVPVIVGFGLFVALAMWLLWR  395 (415)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999972530016569987547220245665320019999999999999999998-7997999999999999999999999


Q ss_pred             CHHHH
Q ss_conf             20003
Q gi|254780967|r  389 NQMFR  393 (398)
Q Consensus       389 ~~~~r  393 (398)
                      ++++|
T Consensus       396 ~~~~~  400 (415)
T PRK11195        396 WHRRN  400 (415)
T ss_pred             HHHHC
T ss_conf             98710


No 70 
>TIGR00890 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741   Oxalate/formate antiporters and many, as yet, uncharacterised proteins belong to this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.94  E-value=1.5e-24  Score=151.87  Aligned_cols=371  Identities=14%  Similarity=0.170  Sum_probs=238.0

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             389999999999886-5766999999999981999-----8899999999999999999999999986508289999999
Q gi|254780967|r    2 EFVIVIAMLMAINSL-GIDIILPCLPKISDSLHLS-----NENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGL   75 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~-~~~~~~p~lp~i~~~l~~s-----~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~   75 (398)
                      +|.++.+.+.+.... ......=-.|.+.+.||.+     ..+.. ...+.+.++.+++++..|.+.||||.|.+.+.|-
T Consensus         2 ~w~~~~g~~~m~~~~g~~YtW~L~~~~l~~~l~~~~~Pdm~~a~~-~~ft~~~~~~a~s~~~gG~~~d~fGpR~~~mlgg   80 (429)
T TIGR00890         2 WWLVLVGTVIMCFVSGYVYTWTLLAPPLGRKLGVKMYPDMVSAVA-VSFTLLLIVLAVSQPVGGKLADKFGPRLVAMLGG   80 (429)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHH
T ss_conf             489999999999999987745544578887507888862268999-9999999998622221242210006638899999


Q ss_pred             HHHHHHH--HHHHCCCCHHHHCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCC-CCCCCCCCC
Q ss_conf             9999999--98510011011100223-2100111111100012332100011112212233100011111-111112222
Q gi|254780967|r   76 VIHIIST--FIMVTINSFTGMLCMRL-IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPIL-APSIGQATV  151 (398)
Q Consensus        76 ~~~~i~~--~~~~~a~~~~~l~~~r~-l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~i-gp~ig~~l~  151 (398)
                      ++..+|.  ...++++|+..++...- +.|+|.|..+..+.....+||| |||+-+-++...++++|... -|++.. ++
T Consensus        81 il~~~G~Gs~~~a~~~s~~~LyL~~G~l~s~G~Gi~Yg~al~tA~kWFP-Dk~GLA~G~~~~GyGlGs~~~~PL~~~-~~  158 (429)
T TIGR00890        81 ILLGLGFGSIFAALADSLAALYLTYGVLASAGVGIVYGIALSTAVKWFP-DKRGLASGIIIGGYGLGSLVLSPLITS-VL  158 (429)
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH-HC
T ss_conf             9999768899987502189999998788779999999989720312265-530389999999864788863035776-33


Q ss_pred             C----------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC--------HHHHCCCC----CCCCCCCCCCC
Q ss_conf             1----------------11111014567888887777888761678864--------02210111----11123331000
Q gi|254780967|r  152 A----------------LSGGWIGIFVCMGVITTFITLWYYIRFPETLD--------PRDVRPLN----LYAILHSFSLI  203 (398)
Q Consensus       152 ~----------------~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~--------~~~~~~~~----~~~~~~~~~~~  203 (398)
                      +                ...+.+..|...+++..+..++..+.++.+++        .|+.++.+    ..+.--+.++.
T Consensus       159 ~PldyrvndqGfftqedl~~~~~~aF~~~G~~~l~~i~~~a~~~~~P~~~WlPkG~~~E~~~~~~~~~~~~~~d~~~~~~  238 (429)
T TIGR00890       159 EPLDYRVNDQGFFTQEDLLEGVEAAFVYMGIVALLVIVLLAFLIKYPPGDWLPKGIHVEEEQEVKKSIEVSEKDYTVAEM  238 (429)
T ss_pred             CCHHCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHH
T ss_conf             60210032564200455664579999999999999999999987078866676656520033134002300023311776


Q ss_pred             CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             000000256777887631001468887654554315311-0158899886576778899999850015651246887788
Q gi|254780967|r  204 FKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIF  282 (398)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~  282 (398)
                      +|++++|.+.....+..............+-++..+.+. ...+...+..+....+.++-|.++||+++.|.+...+.+.
T Consensus       239 lr~~~fWvL~~~f~~~a~~~L~~~g~~~~yg~~L~~~~~g~l~~~vs~~~~~Ng~~R~~~G~~sDk~gr~~~m~~~~~is  318 (429)
T TIGR00890       239 LRTPQFWVLYVSFFLAAVSGLLLIGLLKPYGRSLGDLDVGALVLAVSIISLFNGGGRPVLGAVSDKIGRLKTMSIVFGIS  318 (429)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             42336999999999988899999999999888888889999999999999999888999999974310055667776899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----H---HHHH------HHHHHHHH
Q ss_conf             89999999987325777640379989989999999999999999985346-676----9---9999------99999999
Q gi|254780967|r  283 FMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLA----G---TASS------IFGFINTV  348 (398)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----G---~a~~------l~~~~~~~  348 (398)
                      .+....+.......+.    ..+.+..++.++..|-.......+.-+.+. ++.    |   +|.+      -+|+.+.+
T Consensus       319 av~~~~~~~~~~~~n~----V~FlA~~~~~~ft~Gg~~~lFP~l~s~~FG~~~~~~NYG~~y~A~aGyrireymntfqs~  394 (429)
T TIGR00890       319 AVGMLAMLFIPKISND----VLFLALVALVAFTWGGTFSLFPSLVSDIFGPKYSAANYGLLYTAKAGYRIREYMNTFQSV  394 (429)
T ss_pred             HHHHHHHHHHHHHHHH----HHHHHHHHHHHHCCCHHEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999989987422----899999999984230132111022100001022145303787633136899998888889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999831179999999999999999
Q gi|254780967|r  349 ISTILGIIIGQSFNGTTYPITIGFFGIAVSSFI  381 (398)
Q Consensus       349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  381 (398)
                      ++.+++...+.......+  ...+..++...+.
T Consensus       395 agi~gg~~~~~~~~~~G~--~~~f~~~~~~~l~  425 (429)
T TIGR00890       395 AGIFGGLIASLVLTEIGF--KVTFLVTAALALL  425 (429)
T ss_pred             HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_conf             999999999999988849--9999999999999


No 71 
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94  E-value=8.5e-23  Score=142.20  Aligned_cols=376  Identities=13%  Similarity=0.064  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH--HHHHHHHHH
Q ss_conf             9999999988657669999999999-8199988999999999999999999999999865082899999--999999999
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCLPKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMF--GLVIHIIST   82 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~lp~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~--g~~~~~i~~   82 (398)
                      .+.....+-..+.+++.|-+|..-+ +.|.|.+|+| ++.+...+...+.|+++|.++||.|.||-++.  +......+.
T Consensus        12 ~~s~~yf~yF~~~g~~~pf~~vwL~~~~Gls~~qIG-li~s~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~~~~~~   90 (418)
T PRK09528         12 LFSLFFFFFFFIWSSYFSFFPIWLHDINGLSKTDTG-IIFSAISLFALLFQPLYGVISDKLGLKKYLLWIISGLLVLFGP   90 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999996767898999999-9999999999999888999742024127899999999999999


Q ss_pred             -HHHHCCC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             -9851001----1011-100223210011111110001233210001111221223310001111111111222211111
Q gi|254780967|r   83 -FIMVTIN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG  156 (398)
Q Consensus        83 -~~~~~a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g  156 (398)
                       ....+.+    |++. .+++....++......|...+++.++..  +.+.-.|..-.-.++|.+++..++|.+.+..  
T Consensus        91 ~f~~vf~pll~~~~~lg~~~~~i~~~~~~~a~~pl~ds~~~~~s~--~~~~~YG~iRlwGSiGfavas~~~G~l~~~~--  166 (418)
T PRK09528         91 FFIYVFAPLLQYNILVGAIVGGIYLGFGFNAGAGAIEAYIEKVSR--NSGFEYGRARMFGSLGWALCAFFAGILFNIN--  166 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_conf             999999999999999999999999999873466389999999987--7589762478999999999999988987617--


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH----H
Q ss_conf             10145678888877778887616788640221----011111123331000000000256777887631001468----8
Q gi|254780967|r  157 WIGIFVCMGVITTFITLWYYIRFPETLDPRDV----RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV----N  228 (398)
Q Consensus       157 Wr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  228 (398)
                      -+..|+......++..++.....||+.++.+.    +..+.+...++..+++|+|++|...+...........|-    .
T Consensus       167 ~~~~f~~~s~~~li~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~~~~~~~~~~~~d~~f~~  246 (418)
T PRK09528        167 PQINFWLGSGCALILAVLLFFAKPDAPSTATVANAVGANPSAVSLKDALALFKLPKFWFLVLYVIGVACIYDVFDQQFPN  246 (418)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             32899999999999999999846765322100000014668877999999836749999999999999999999988889


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             87654554315311015889988657677889999985001565124688778889999999987325777640379989
Q gi|254780967|r  229 SSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF  308 (398)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
                      ....++.+....++..+...+...+..+..-.+.+++.+|++.|+....+..+..+-....   .    .....+.....
T Consensus       247 f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~r~g~k~~Llla~~~~~lRw~~~---~----~~~~~~~i~~~  319 (418)
T PRK09528        247 FFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIINRIGAKNALLLAGTIMAVRIIGS---A----FATNALEVSIL  319 (418)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---H----HCCCHHHHHHH
T ss_conf             9999977016671367699999999999999999999986080999999999999999986---3----00138999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHH
Q ss_conf             989999999999999999985346-676999999999-999999999999999983117999999-9999999-999999
Q gi|254780967|r  309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGF-INTVISTILGIIIGQSFNGTTYPITIG-FFGIAVS-SFICIL  384 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~  384 (398)
                      -.+-+...+........+..+..| |.++++..+... ....+..+.+++.|.++|..+...... +.+++++ .++...
T Consensus       320 qlLHa~tf~l~~~a~~~yI~~~~~~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~~~~y~~~g~i~~~~tlis~f  399 (418)
T PRK09528        320 KLLHAFEVPFLLVGIFKYITSNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQDTYLVLGLIVLGFTLISAF  399 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999858888899999999999999999997420688999844579999999999999999999


Q ss_pred             HHHCCHHHH
Q ss_conf             994220003
Q gi|254780967|r  385 IVEKNQMFR  393 (398)
Q Consensus       385 ~~~~~~~~r  393 (398)
                      .+++++...
T Consensus       400 ~l~~~~~~~  408 (418)
T PRK09528        400 TLSGKRPLS  408 (418)
T ss_pred             HHCCCCCCC
T ss_conf             735788675


No 72 
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93  E-value=3.4e-22  Score=138.89  Aligned_cols=365  Identities=14%  Similarity=0.100  Sum_probs=219.2

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HH
Q ss_conf             999886576699999-999998199988-9999999999999999999999998650828999999999999999---85
Q gi|254780967|r   11 MAINSLGIDIILPCL-PKISDSLHLSNE-NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF---IM   85 (398)
Q Consensus        11 ~~~~~~~~~~~~p~l-p~i~~~l~~s~~-~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~---~~   85 (398)
                      .+++++.-+.+--.+ -.+...++-++. ....+....|.+.+.+.+.+.|.++|||.+++++...-..-.+.++   .+
T Consensus        19 qflgAfnDn~~K~~l~~~~~~~~~~~~~~~l~~l~~~lFiLPF~Lfsa~aG~lADr~~K~~vir~~k~~Ei~im~l~~~~   98 (1150)
T PRK08633         19 QFLNAFNDLGHKIIIQNTLIKAYDGSEAGILTAIVNALILLPFLLFSSPAGFLADKFPKNRVIVIVALFEVGLTLLIVAG   98 (1150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99809999999999999999981851357999999999999999986427774230748899999999999999999999


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-------CC
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111-------10
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-------WI  158 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-------Wr  158 (398)
                      .+..+++.+++.-+++|...+.+.|+-++++.|..+++|..+++++++++.-++.++|-.+|+.+.+...+       +.
T Consensus        99 ~~~~~~~~l~~~lflmg~qSa~fgPaKYgiLpe~l~~~eL~~aNglve~~Tf~AIL~Gti~gg~l~~~~~~~~~~~~~~~  178 (1150)
T PRK08633         99 YYLGWFWLAFAATFLLGAQSAIYSPAKYGIIKELVGKENLSRANGLIEAVTIVAILAGTALFSFLFESLYGYNQTSEILQ  178 (1150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf             99722999999999999999876179998888767922052766099999999999999999999986435555310255


Q ss_pred             HHHHHHHH--HHHHHHHHHHHHCCCCCCHHHHCCCCC--------CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             14567888--887777888761678864022101111--------11233310000000002567778876310014688
Q gi|254780967|r  159 GIFVCMGV--ITTFITLWYYIRFPETLDPRDVRPLNL--------YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVN  228 (398)
Q Consensus       159 ~~f~~~~~--~~~~~~~~~~~~~pet~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (398)
                      ....+..+  ...+...+..+.+|++.+.+...+.+.        ....++.+.+.++|..|...+..++.++.-..++.
T Consensus       179 ~~~~~~~~l~~~Av~g~~~s~~IP~~~~~~p~~~~~~n~~~~~~~~~~~~~l~~~~~~~~l~~silgiSwFW~~ga~~l~  258 (1150)
T PRK08633        179 RIAPLGIVLLAVALIELFFAFRLPKVPATAANRPLVFNPKDYLRGSLLIENLKLLRHDRNLWLAIIGLSYFWFVSQLLLA  258 (1150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             78999999999999999998209899888888833578268774677999999998593889999999999999999999


Q ss_pred             HHHHHHHHHCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf             876545543153110--158899886576778899999850015651246887788899999999873257776403799
Q gi|254780967|r  229 SSQQIYVGIYQLGNL--FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFI  306 (398)
Q Consensus       229 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (398)
                      ..|.+..+..+.++.  .....+..+++..+|++++++++++.-.......+.....+....   ....    .+.+...
T Consensus       259 ~~p~~~k~~Lg~~~~~~~~~Lla~~~iGI~~GS~la~~ls~~~ie~glvP~Ga~g~~l~~~~---l~~~----~~~~~~~  331 (1150)
T PRK08633        259 NFPAYGKEELGLDNTFQVQYLLAASAIGIGIGSLLAGRLSKRYIELGIVPLGAFGMTLMLFL---LPAA----SSLPSVL  331 (1150)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH---HHHH----HHHHHHH
T ss_conf             88999999838980899999999999999999999999967966425458899999999999---9987----6589999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89989999999999999999985-346676999999999999999999999999983117999999999999999999
Q gi|254780967|r  307 AFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICI  383 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  383 (398)
                      ..+++.+++.|+...+.++..+. ..++.+|+..+..|.++..+..... .+........++....+..++++.++..
T Consensus       332 ~~l~~~G~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNi~n~~~mv~~~-~~~~~l~~~~~s~~~~f~~la~~~~~~~  408 (1150)
T PRK08633        332 LLFFLFGFSGGLFIVPLNALIQFRAPEKELGEVLAANNFLQNVGMLLFL-GLTWLFSYLGISPAGLFYFIALVTLIGT  408 (1150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             9999999986775677899987418865523422898999999999999-9999999818899999999999999999


No 73 
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92  E-value=8.5e-22  Score=136.68  Aligned_cols=339  Identities=12%  Similarity=0.047  Sum_probs=211.3

Q ss_pred             HHHHHHHHHHHHHHHH-----HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---
Q ss_conf             9999886576699999-----99999819998899999999999999999999999986508289999999999999---
Q gi|254780967|r   10 LMAINSLGIDIILPCL-----PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS---   81 (398)
Q Consensus        10 ~~~~~~~~~~~~~p~l-----p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~---   81 (398)
                      .-+++++.-+.+--++     -...++.+.+......+....|.+.+.+.+-+.|.++|||.+++++...-..-..-   
T Consensus        20 tQflgAfNDN~~K~alv~li~~~~~~~~~~~~~~l~~la~alFiLPF~Lfsa~aG~LADk~~K~~iir~~K~~Ei~im~l   99 (1139)
T PRK06814         20 TQFFGAFNDNFLKNALVILILYGLSGALSKYGALLVTLANAVFILPFFILSGLAGQLADKYDKAKLIKILKFAEIGIAAL   99 (1139)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             99980888899999999999987512567654699999999999999998621656545164889999999999999999


Q ss_pred             HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99851001101110022321001111111000123321000111122122331000111111111122221111110145
Q gi|254780967|r   82 TFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus        82 ~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f  161 (398)
                      ...+.+..+++.+++.-+++|.-.+.+.|+-++++.|..+++|..+++++++++.-++..+|...|+.+.. ..++...-
T Consensus       100 ~~~~~~~~~~~~l~~~lflmg~qSa~FgP~KYgiLpe~l~~~eL~~gNglve~~Tf~AIL~Gti~gg~l~~-~~~~~~~~  178 (1139)
T PRK06814        100 AIYGFHLNSVPLLFAALGLFGIHSAFFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLYTI-SGNFVILG  178 (1139)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHH
T ss_conf             99999986599999999999999986608999887986591215144339999999999999999999996-58638999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             67888887777888761678864022101111---112333100000000025677788763100146888765455431
Q gi|254780967|r  162 VCMGVITTFITLWYYIRFPETLDPRDVRPLNL---YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY  238 (398)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (398)
                      ..+.. ..+...+..+.+|++.+.++..+.+.   ++.++..+.+.++|..|...+..++.+..-..++...|.+..+..
T Consensus       179 ~~~~~-~Av~g~~~s~~ip~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~l~~ailgiSwFW~~ga~~l~~~p~~~k~~l  257 (1139)
T PRK06814        179 YSLMG-IAVLGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRLWLAILGISWFWLIGAVVLSQLPLLAKDTL  257 (1139)
T ss_pred             HHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999-99999999950889998899885343468999999999873917999999999999999999997099999981


Q ss_pred             CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-C------------CCCHH
Q ss_conf             5311-01588998865767788999998500156512468877888999999998732577-7------------64037
Q gi|254780967|r  239 QLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH-P------------IHLLI  304 (398)
Q Consensus       239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~  304 (398)
                      +.++ ..+...+..+++..+|++++++++++.-.-.....+.....+...-+......... +            ...+.
T Consensus       258 ~~~~~~~~~lla~fsiGI~~GS~la~~ls~~~ie~glvp~Ga~g~~~~~~~L~~~~~~~~~~~~~~~~~~~f~~~~~~~~  337 (1139)
T PRK06814        258 GGDENVVTLFLAVFSIGIAVGSFLCSKLLEGEITLLYVPIGALGMGIFGLDLAFASSSVPAEPTQLKSILVFLSKRHGWR  337 (1139)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
T ss_conf             89788999999999999999999999994798013300788999999999999871247788503657999971623499


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9989989999999999999999985-346676999999999999999
Q gi|254780967|r  305 FIAFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVIS  350 (398)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~  350 (398)
                      ...-++..+++.|+...+.++..+. ..++++|+..+..|.++..+.
T Consensus       338 ~~~~l~~~g~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNiln~~~M  384 (1139)
T PRK06814        338 ILIDLFFLAIIGGLYIVPLFAALQAWANPAHRARVIAANNVINAIFM  384 (1139)
T ss_pred             HHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999974500452258998852887666787799999999999


No 74 
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.91  E-value=5.6e-20  Score=126.64  Aligned_cols=350  Identities=14%  Similarity=0.082  Sum_probs=195.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH
Q ss_conf             9999999886576699999-9999981999889999999999999999999999998650-8289999999999999998
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCL-PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFI   84 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~l-p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~   84 (398)
                      +...-+...++..-+...+ -.+.++++.|+++... +.+.|..-.=+..++.|+++||+ |+||.+++|.++.++|.+.
T Consensus        26 lf~tE~wERFsyYGmralL~lyl~~~Lg~s~~~A~~-i~g~f~alvYl~pi~GG~lADr~LG~r~ti~~G~il~~~G~~~  104 (500)
T PRK09584         26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSIT-LFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL  104 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999884998889999-9999999999999869999896104099999999999998999


Q ss_pred             HHCCCC-HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             510011-011100223210011111110001233210001--11122122331000111111111122221111110145
Q gi|254780967|r   85 MVTINS-FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR--DMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus        85 ~~~a~~-~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~--~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f  161 (398)
                      .++..+ ...++++-.+..+|.|..-|...+++.|.++++  ||.+++++..++.++|..++|.+.+ ++.+..||++.|
T Consensus       105 La~~~~~~~~~~~gL~lI~vG~G~~KpnisslvG~lY~~~d~rrD~~FtiFYmgINiGafla~ll~g-~l~~~~G~~~gF  183 (500)
T PRK09584        105 VAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP-WLAAKYGWSVAF  183 (500)
T ss_pred             HHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHCHHHHH
T ss_conf             9723563789999999999555346765778887605899633224422899999899999999999-999873616789


Q ss_pred             HHHHHHHHHHHHHHHH---HCCCCCCHHHHCCCCCCCCCC----------------------------------------
Q ss_conf             6788888777788876---167886402210111111233----------------------------------------
Q gi|254780967|r  162 VCMGVITTFITLWYYI---RFPETLDPRDVRPLNLYAILH----------------------------------------  198 (398)
Q Consensus       162 ~~~~~~~~~~~~~~~~---~~pet~~~~~~~~~~~~~~~~----------------------------------------  198 (398)
                      ...++..++..+...+   .+++...+++.++.+.++...                                        
T Consensus       184 ~~a~igM~igli~f~~~~k~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (500)
T PRK09584        184 ALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKE  263 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98999999999999997887425788867453015689999999999999999997304899999999999999999999


Q ss_pred             --CCCCCCCCCHHHHHHHHHHHHHHCCHH-HHH--HHHHHHHHH------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --310000000002567778876310014-688--876545543------153110158899886576778899999850
Q gi|254780967|r  199 --SFSLIFKHRASTLYNIANSLTMGAILG-FVN--SSQQIYVGI------YQLGNLFPIAFAVGGFAMSIASFINSRLVE  267 (398)
Q Consensus       199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  267 (398)
                        .....-|+|. +.. +...+....++. |..  .+-.++.+.      .+..-..+...+++.+..++.+++..++-+
T Consensus       264 ~~~~~~~er~r~-~~~-~il~~~~ivFw~~y~Q~~ssl~lfa~~~vd~~l~g~~ip~~~fqslNpl~IiilaPl~a~lw~  341 (500)
T PRK09584        264 AFAMKGAARRKM-IVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYN  341 (500)
T ss_pred             HCCCCHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             704788998358-999-999999999999999834899999998334212773217899988727999998999999999


Q ss_pred             CCCCCCHH--HHHHHHHHHHHH--HHHHHH--HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf             01565124--688778889999--999987--325777640379989989999999999999999985346-67699999
Q gi|254780967|r  268 KFGIRRVS--HYSLLIFFMITG--SWLLVQ--ITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASS  340 (398)
Q Consensus       268 r~~~~~~~--~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~  340 (398)
                      |.++|...  +.+........+  .+....  .......+.++.+....+...+--++.|.-.+...+..| +.+|..++
T Consensus       342 ~lg~~~~~p~KfaiG~~l~gl~F~vl~~~~~~~~~~g~vs~~Wlv~~Y~l~tigEL~lSPvGLS~vtklAP~~~~s~mMG  421 (500)
T PRK09584        342 KMGDTLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMG  421 (500)
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf             81777883699999999999999999999986267884068999999999999999975899999998785999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999
Q gi|254780967|r  341 IFGFINTVISTILGIIIGQS  360 (398)
Q Consensus       341 l~~~~~~~~~~~~~~~~g~~  360 (398)
                      +.......+..+.+.+.+..
T Consensus       422 ~wfls~a~gn~lag~ia~~~  441 (500)
T PRK09584        422 SWFLTTAGAALIAGYVAGLM  441 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999986


No 75 
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.91  E-value=3.5e-21  Score=133.29  Aligned_cols=365  Identities=15%  Similarity=0.179  Sum_probs=231.2

Q ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH-HHHHHHHHHHHHHHHHCC---C
Q ss_conf             66999999999981999889999999999999999999999998650-----82899-999999999999985100---1
Q gi|254780967|r   19 DIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIV-MMFGLVIHIISTFIMVTI---N   89 (398)
Q Consensus        19 ~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i~~~~~~~a---~   89 (398)
                      .+....++..-+|-|+|.+++|.  .+.-.+.|.+ .++|.|+.||+     ||||- ++.......++....++.   +
T Consensus        29 ~L~~~tL~~WLr~~Gvsl~tIGl--fslv~lpYsl-KFLWAPlvDr~~~P~LGrRRsWill~Q~~l~~~l~~ma~~~P~~  105 (490)
T PRK11010         29 ALTSGTLQAWMTVENIDLKTIGF--FSLVGQAYVF-KFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGT  105 (490)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHH--HHHHHHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf             99997999999887998899999--9999999999-99988788564787787347999999999999999999759675


Q ss_pred             CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH
Q ss_conf             101110022321001111111000123321000111122122331000111111111122221-1111101456788888
Q gi|254780967|r   90 SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA-LSGGWIGIFVCMGVIT  168 (398)
Q Consensus        90 ~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~-~~~gWr~~f~~~~~~~  168 (398)
                      |.+.+...-++..+.++....+..++=.|..++||++...+....++.+|..++...+ .++. .+.||+..|..++.+.
T Consensus       106 ~l~~~a~~allvAf~SATQDIaiDAyRiE~l~~~eqg~gaa~~v~GYRigmlvsGa~a-L~lAd~~~gW~~~Y~~mA~lm  184 (490)
T PRK11010        106 QLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLA-LWLADRWLGWQGMYWLMAALL  184 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHHH
T ss_conf             7999999999999998778999989999836861335899999999999999987999-999876226599999999999


Q ss_pred             HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             777788876167886402210111111233310000000002567778876-3100146888765455431531101588
Q gi|254780967|r  169 TFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLT-MGAILGFVNSSQQIYVGIYQLGNLFPIA  247 (398)
Q Consensus       169 ~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (398)
                      ++..+. .+..||+..+++.++.-.+...+.+++.++++..+.......+. .+-.+.-....|++..+..-..++.+..
T Consensus       185 l~g~~~-tl~~pEP~~~~~~~~~l~~avv~Pf~~Ff~R~~a~lIL~fI~lYKlgDa~~g~M~~pFyl~dlGFS~~eIa~v  263 (490)
T PRK11010        185 IPCIIA-TLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVV  263 (490)
T ss_pred             HHHHHH-HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             999999-9838886555433137999999999999970689999999999996799999986688774328888899988


Q ss_pred             HHHHH-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99886-57677889999985001565124688778889999999987325777640379989989999999999999999
Q gi|254780967|r  248 FAVGG-FAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSI  326 (398)
Q Consensus       248 ~~~~~-~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      ....+ ...++|+++.|.+..|+|..|....+.......-..+.......   ............-.++.|+......++
T Consensus       264 ~K~~Gl~atI~G~~lGG~li~R~Gl~raL~i~gilqalsNL~f~~LA~~g---~~~~~l~~aI~~Enf~~G~gtaAfvAy  340 (490)
T PRK11010        264 NKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITD---KNLYSMGAAVFFENLCGGMGTAAFVAL  340 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             85899999999999999999997299999999999996789999999708---848999999999988878999999999


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             985-34667699999999999999999999999998311799999999999999999999942200
Q gi|254780967|r  327 SME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQM  391 (398)
Q Consensus       327 ~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (398)
                      .++ +.++...+..++.+.+...+....++..|.+.|...|+....+.....+..+.+++..|++.
T Consensus       341 LssL~n~~ftATQYALlSSl~al~r~~~g~~SG~lve~~Gw~~FFi~t~~~~IP~llLL~~~r~~l  406 (490)
T PRK11010        341 LMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQTL  406 (490)
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             998538322599999999999722563156588984751838799999999989999999997353


No 76 
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89  E-value=6e-21  Score=132.01  Aligned_cols=334  Identities=14%  Similarity=0.105  Sum_probs=188.2

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHH-HHHHHHHHHHHHHHHHCCCC------HHH
Q ss_conf             999999819998899999999999999999999999986----5082899-99999999999998510011------011
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIV-MMFGLVIHIISTFIMVTINS------FTG   93 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~-l~~g~~~~~i~~~~~~~a~~------~~~   93 (398)
                      +..+.+.+|++...+| .+...--+--++.-|+.|.++|    |+||||. ++.|....++...+....++      +.+
T Consensus        30 ~~fyTdv~Gl~~~~~g-~i~~i~ri~DAitDPi~G~isDrt~tr~GrrrP~il~g~i~~~i~~~llf~~~~~~~~~~~~~  108 (473)
T PRK10429         30 MYYYTDVVGLSVGLVG-TLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSIVLFLLFSAHLFEGTAQIVF  108 (473)
T ss_pred             HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHCCHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             9999986198899999-999999999993433332501068998888458998898999999999974878650699999


Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCCC-----CCCCCCCC--CCCCCCCHHHHHHH
Q ss_conf             100223210011111110001233210-00111122122331000111111-----11112222--11111101456788
Q gi|254780967|r   94 MLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPILA-----PSIGQATV--ALSGGWIGIFVCMG  165 (398)
Q Consensus        94 l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~ig-----p~ig~~l~--~~~~gWr~~f~~~~  165 (398)
                      +.+..++..++......+-.++.+|+. +++||++..++-....+++..+.     |.++ ..-  +...+|+..-.+.+
T Consensus       109 ~~~~yil~~~~yT~~~vPy~aL~~elT~D~~ERt~l~~~R~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~g~~~~~~i~~  187 (473)
T PRK10429        109 VCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVN-YVGGGDRGFGFQMFTLVLI  187 (473)
T ss_pred             HHHHHHHHHHHHHHEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHH
T ss_conf             999999999999841563000003430688889999999999999999999999999996-6069856589999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             888777788876167886402210--111111233310000000002567778876310014688876545543153110
Q gi|254780967|r  166 VITTFITLWYYIRFPETLDPRDVR--PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL  243 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pet~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (398)
                      ++..+.....++..||...+++.+  +.+....++..+.+++||.++.......+.............++.....+..+.
T Consensus       188 ~i~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~~~~l~~N~~~~~l~~~~l~~~~~~~i~~~~~~Yy~~y~lg~~~~  267 (473)
T PRK10429        188 AFFIVSTIVTLRNVHEVYSSDNGVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL  267 (473)
T ss_pred             HHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             99999999999702012455445555556878999999997265999999999999999999999999999999078889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             15889988657677889999985001565124688778889999999987325777640379989989999999999999
Q gi|254780967|r  244 FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNF  323 (398)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (398)
                      .+.......+..+++.++..++.+|+++|+....+..................  +...........+.+++.+......
T Consensus       268 ~~~~~~~~~i~~ii~~~~~~~l~kk~gKk~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~l~~i~~~~~~~g~~~~~~l~  345 (473)
T PRK10429        268 FPYYLSYAGAANLVTLILFPRLVKLLSRRILWAGASIFPVLSCGVLLLMALAA--PHNALLIVLAGILLNIGTALFWVLQ  345 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999997289999999999999999999999805--0049999999999999888999999


Q ss_pred             HHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999985-------346-676999999999999999999999999983
Q gi|254780967|r  324 SSISME-------PFS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       324 ~~~~~~-------~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      .+...|       ..+ ++.|...|..++.+-.+.++++.+.|...+
T Consensus       346 ~sm~aDvvDy~E~ktG~R~eG~~~s~~sf~~K~~~al~~~i~g~~L~  392 (473)
T PRK10429        346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIAVVLG  392 (473)
T ss_pred             HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99831500388988288418799999999999999999999999999


No 77 
>PRK09669 putative symporter YagG; Provisional
Probab=99.89  E-value=2.6e-20  Score=128.51  Aligned_cols=328  Identities=13%  Similarity=0.142  Sum_probs=187.3

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHH-HHHHHHHHHHHHHHHHCCCCH------HH
Q ss_conf             9999998199988999999999999999999999999865----082899-999999999999985100110------11
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR----FGRKIV-MMFGLVIHIISTFIMVTINSF------TG   93 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr----~Grr~~-l~~g~~~~~i~~~~~~~a~~~------~~   93 (398)
                      +..+.+.+|+|...+| .+....-+--++.-|+.|.++||    +||||. ++.+....++...+....|+.      .+
T Consensus        31 ~~fyt~v~Gl~~~~vg-~i~~i~ri~Dai~DPliG~lsDrt~tr~Grrrp~il~~~ip~~l~~~llf~~p~~~~~~~~~~  109 (442)
T PRK09669         31 AYFYTDVFGLSAAIMG-TMFLLVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCMLTFYTPDFSETGKIIY  109 (442)
T ss_pred             HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf             9999986097899999-999999999993522341134268998766139999999999999999995788883089999


Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCCCCCCCCCCC---C---CCCCCCHHHHHHHH
Q ss_conf             100223210011111110001233210-0011112212233100011111111112222---1---11111014567888
Q gi|254780967|r   94 MLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPILAPSIGQATV---A---LSGGWIGIFVCMGV  166 (398)
Q Consensus        94 l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~---~---~~~gWr~~f~~~~~  166 (398)
                      +.+..++..++......+..++..|+. +++||++..++-.....+|..+...+...+.   .   ...+|.....+.++
T Consensus       110 ~~~~~~l~~~~~T~~~iPy~aL~~elt~d~~eRt~l~~~r~~~~~~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  189 (442)
T PRK09669        110 ACVTYILLTLVYTAINVPYCAMPGVITNDPKERHSLQSWRFALSTAGGLIVSGIALPLVDWIGKGDEQKGYFGAMCVMGL  189 (442)
T ss_pred             HHHHHHHHHHHHHHEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             99999999999887001335402110688889999999999999999999999999999871786243499999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             88777788876167886402210111111233310000000002567778876310014688876545543153110158
Q gi|254780967|r  167 ITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPI  246 (398)
Q Consensus       167 ~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (398)
                      +..++....+...+|...++++   +.++..++.+.+++||.++.......+.............++.....+.++..+.
T Consensus       190 i~~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~l~~~~~~~~  266 (442)
T PRK09669        190 LGVVLFFVCFFTTKERYTFEVQ---PQSSVLKDLKLLLANSQWRILFAFNVVLLTAVVVRGGATLYYVKYVMGRPDLATL  266 (442)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCC---CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             9999999996044356687666---7744999999998561999999999999999999976899999999077779999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89988657677889999985001565124688778889999999987325777640379989989999999999999999
Q gi|254780967|r  247 AFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSI  326 (398)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      ......++..++..+..++.+|+++|+....+.....+......   .....  ..+.......+.+++.+.......+.
T Consensus       267 ~~~~~~~~~i~~~~~~~~l~~k~gk~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~l~g~~~~~~~~l~~sm  341 (442)
T PRK09669        267 FLVYGMIANMFGALLSSRLLGRFDRVKAFKWIIIAYSVLSALIF---FIPAE--NIALIFALNILFLFVQNTTTPLQWSM  341 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999996589999999999999999999---95752--39999999999999999999989998


Q ss_pred             H---HHH----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9---853----46-67699999999999999999999999998
Q gi|254780967|r  327 S---MEP----FS-HLAGTASSIFGFINTVISTILGIIIGQSF  361 (398)
Q Consensus       327 ~---~~~----~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~  361 (398)
                      .   .|.    .+ ++.|.-.|+.++.+-.+.++++.+.|...
T Consensus       342 ~aDviD~~e~~tG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L  384 (442)
T PRK09669        342 ASDVVDYEESRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL  384 (442)
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7758887786039985029999999999999999999999999


No 78 
>KOG0252 consensus
Probab=99.89  E-value=2.8e-22  Score=139.30  Aligned_cols=345  Identities=16%  Similarity=0.171  Sum_probs=182.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC-------HHHHCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999999999999986508289999999999999998510011-------01110022321001111111
Q gi|254780967|r   38 NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINS-------FTGMLCMRLIQGIGGAAPRI  110 (398)
Q Consensus        38 ~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~-------~~~l~~~r~l~G~g~~~~~~  110 (398)
                      .+...+..+-.+|..+||+++|++.||+|||+++...+.+..+++++++++..       .+++...|++.|+|.|+.+|
T Consensus        84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYP  163 (538)
T KOG0252          84 GVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYP  163 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             58889899899889999999988886623124666789999999998647777689730246888988886114267786


Q ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             00012332100011112212233100011111111112222--------------1111110145678888877778887
Q gi|254780967|r  111 ITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV--------------ALSGGWIGIFVCMGVITTFITLWYY  176 (398)
Q Consensus       111 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~--------------~~~~gWr~~f~~~~~~~~~~~~~~~  176 (398)
                      .+.++.+|....++|+..++.+-+..+.|...|..++-.+.              ....=||..|-+..+.++ ..+...
T Consensus       164 lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~-~~ly~R  242 (538)
T KOG0252         164 LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPAL-LVLYFR  242 (538)
T ss_pred             CHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_conf             4287764564210123025788875260576502999999999716378888736778999999999878899-888766


Q ss_pred             HHCCCCCCHH-----H--------HCCCCC----C-------CCCC-CCC---CCCCCC---HHHHHHHHHHHHHHCCHH
Q ss_conf             6167886402-----2--------101111----1-------1233-310---000000---002567778876310014
Q gi|254780967|r  177 IRFPETLDPR-----D--------VRPLNL----Y-------AILH-SFS---LIFKHR---ASTLYNIANSLTMGAILG  225 (398)
Q Consensus       177 ~~~pet~~~~-----~--------~~~~~~----~-------~~~~-~~~---~~~~~~---~~~~~~~~~~~~~~~~~~  225 (398)
                      ..+|||..-+     +        +++.+.    +       +..+ +++   ..+..+   +........++.-.+++.
T Consensus       243 l~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~  322 (538)
T KOG0252         243 LKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYG  322 (538)
T ss_pred             HCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             30776046787750587665540054565420001024567898621112589999999888999988888741015520


Q ss_pred             HHHHHHHHHHHHCCCCCC--H------HHHHHHHHHH-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             688876545543153110--1------5889988657-677889999985001565124688778889999999987325
Q gi|254780967|r  226 FVNSSQQIYVGIYQLGNL--F------PIAFAVGGFA-MSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITS  296 (398)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~-~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (398)
                      +-.....++.+..-.+..  .      .....+.+.. ...+.++...++|+.|+++....+..+..+..   +......
T Consensus       323 ~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~---~~~~~~y  399 (538)
T KOG0252         323 QNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFF---FVIAGPY  399 (538)
T ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHCHHHHHHHHHHHHHHHH---HHHCCCC
T ss_conf             4407899988616177740289999999998899987368761488887511132688776099999999---9974874


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-H
Q ss_conf             7776403799899899999999999999--99985346-67699999999999999999999999998311-----79-9
Q gi|254780967|r  297 NHPIHLLIFIAFFFLASFQFGLINSNFS--SISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGT-----TY-P  367 (398)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-----~~-~  367 (398)
                      ++......+.+...+.. .++-..|+.+  ....|.+| +.||+..++..+.+-.++.++........++.     .. .
T Consensus       400 ~~~~~~~Gf~v~y~l~~-ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~  478 (538)
T KOG0252         400 NQLENTIGFVVLYSLTF-FFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRN  478 (538)
T ss_pred             CCCCCCCCEEEHHHHHH-HHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf             44556476553588999-99865999626983455353877665455888866302889998766766246776556217


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999994
Q gi|254780967|r  368 ITIGFFGIAVSSFICILIVE  387 (398)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~  387 (398)
                      ..+.+.++.....+..+++.
T Consensus       479 v~~i~~~~~~~gi~~T~l~p  498 (538)
T KOG0252         479 VFIILAGCMLLGILFTLLIP  498 (538)
T ss_pred             HHHHHHHHHHHHHHHEEEEE
T ss_conf             89999998998677126720


No 79 
>TIGR00897 2A0118 polyol permease; InterPro: IPR004748   Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.89  E-value=1.9e-20  Score=129.18  Aligned_cols=330  Identities=11%  Similarity=0.111  Sum_probs=228.1

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HCC-CCHHHHCCCCCC
Q ss_conf             9999998199988999999999999999999999999865082899999999999999985---100-110111002232
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM---VTI-NSFTGMLCMRLI  100 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~---~~a-~~~~~l~~~r~l  100 (398)
                      |...-.|.|.|.+|.+ ...|.|-++.++++-++|...|.+|+||+|.+|++.+++++...   ++- -|++.++....+
T Consensus        41 LSpfl~~~Gls~~~sa-s~Ft~YGiA~aisaW~SGv~~e~~gp~kTM~~Gll~~~~g~aaFivfg~~h~nyp~~l~~Y~~  119 (411)
T TIGR00897        41 LSPFLVELGLSVQQSA-SLFTLYGIAVAISAWLSGVVVEIIGPKKTMMIGLLLYVVGSAAFIVFGLEHLNYPLLLLFYAI  119 (411)
T ss_pred             HHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             3289996188887899-999999999999988888999864221678999999999999999986888889999998888


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             1001111111000123321000111122122331000111-111111122221111110145678888877778887616
Q gi|254780967|r  101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMP-ILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRF  179 (398)
Q Consensus       101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~-~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~  179 (398)
                      -|++--...-.-...+....+.++.+++.|+.=..+++|. +.||-+.++-+. +.|.-.+.|..-.......++.++..
T Consensus       120 rGlgYPLFaYSFlvwv~y~~~~~~ls~AvGWFW~~y~~G~~VfG~~ysSyaip-afGe~nTLWsal~fv~~Gg~~AL~~~  198 (411)
T TIGR00897       120 RGLGYPLFAYSFLVWVVYNTKQDKLSSAVGWFWIVYSIGLGVFGSYYSSYAIP-AFGELNTLWSALLFVLTGGVLALFIN  198 (411)
T ss_pred             HHCCCHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             84021788887672220212411003317899999997465430122012555-30323468999999999899999987


Q ss_pred             CCCCCHHHHC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHH
Q ss_conf             7886402210----1111112333100000000025677788763100146888765455431531101-5889988657
Q gi|254780967|r  180 PETLDPRDVR----PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLF-PIAFAVGGFA  254 (398)
Q Consensus       180 pet~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  254 (398)
                      ||..+|+++|    +++.++..|...-+++||+...-...-....-+.++|--..|..+.++++.+... --..+...+.
T Consensus       199 kd~ftp~~~qnlt~~ek~~EL~ka~TilftNp~vl~gg~vriIN~ig~fGFavflPmm~~a~~G~StseWLQiWg~~Ff~  278 (411)
T TIGR00897       199 KDKFTPKKKQNLTTREKFEELGKAVTILFTNPKVLLGGVVRIINTIGLFGFAVFLPMMFLAELGFSTSEWLQIWGTLFFT  278 (411)
T ss_pred             HHCCCHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             52058066524666700677740000201078400002788776132213467635899976387402589999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             67788999998500156512468-87788899999999873257776403799899899999999999999999853466
Q gi|254780967|r  255 MSIASFINSRLVEKFGIRRVSHY-SLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSH  333 (398)
Q Consensus       255 ~~~~~~~~~~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                      .++.+.+.|-+.||+|-|+..++ ++....+....+...+  .....+.++..+..++.|...+-- .+..+......||
T Consensus       279 nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P--~~~Ghs~av~~iia~~~G~~lAgy-VPl~A~~Ptlapk  355 (411)
T TIGR00897       279 NIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIP--QFIGHSFAVVLIIAIIYGILLAGY-VPLAAVLPTLAPK  355 (411)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCC
T ss_conf             9999999975414468731667637645899999998656--652258999999999999999866-3488742234899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             769999999999999999999999999
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQS  360 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~  360 (398)
                      ++|.|+|++|... ..++..+|.+..+
T Consensus       356 ~KGAA~SVlNL~a-GlsaF~aPaia~l  381 (411)
T TIGR00897       356 DKGAAMSVLNLSA-GLSAFVAPAIAVL  381 (411)
T ss_pred             CCCHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf             8731564888886-2887888999999


No 80 
>TIGR02332 HpaX 4-hydroxyphenylacetate permease; InterPro: IPR012707   Among the different families of transporter only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients , .   This entry represents a group of MFS proteins encoded in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterised as 4-HPA permease in Escherichia coli, where 3-HPA and 3,4-dihydroxyphenylacetate, but not other substrate analogues, were shown to competitively inhibit 4-HPA transport, indicating a narrow substrate specificity ..
Probab=99.88  E-value=8.9e-22  Score=136.57  Aligned_cols=332  Identities=16%  Similarity=0.169  Sum_probs=237.5

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf             99999819998899999999999999999999999986508289999999999999998510011011100223210011
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGG  105 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~  105 (398)
                      -.+.+|+|++....| +..+.|...|.+..++.-.+-.+.|.||-+..-.+++++++-...|+++...+++.|.+.|+.+
T Consensus        32 ltmG~dlGl~~tmfG-la~tlfy~~yv~~GiPsn~ml~~~GarrWia~imv~WGiast~tmfat~P~~ly~lr~lvGi~e  110 (412)
T TIGR02332        32 LTMGKDLGLSATMFG-LAATLFYVAYVIFGIPSNIMLAKVGARRWIATIMVLWGIASTATMFATSPESLYLLRILVGIAE  110 (412)
T ss_pred             HHHCCHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             221001003688999-9999999999986262789998863578988999987567665543057417888999987642


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             1111100012332100011112212233100011111111112222111-----11101456788888777788876167
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-----GGWIGIFVCMGVITTFITLWYYIRFP  180 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-----~gWr~~f~~~~~~~~~~~~~~~~~~p  180 (398)
                      ++..|....+++-|+|.-.|+|++++...+..+...+|..+.|+++...     -||+|.|..-+..+++..+..|++++
T Consensus       111 aGflPGil~ylt~WfPay~raranalfm~amPvt~~lG~i~sGyil~ldG~~~lkGWqWlflleG~Psv~lGv~~Wf~l~  190 (412)
T TIGR02332       111 AGFLPGILLYLTFWFPAYFRARANALFMVAMPVTTALGLILSGYILALDGLMALKGWQWLFLLEGLPSVLLGVVVWFYLD  190 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf             00225799999986346777677788788878999988898779999877876201467777722168998988876404


Q ss_pred             CCCCHHHHCCCCCCCC--------------------------CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             8864022101111112--------------------------33310000000002567778876310014688876545
Q gi|254780967|r  181 ETLDPRDVRPLNLYAI--------------------------LHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIY  234 (398)
Q Consensus       181 et~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (398)
                      |++.+.+--+++.++.                          ...+|+++ .|....+.+.+.+.....-+..-+.|.++
T Consensus       191 d~Pd~a~Wl~~~~k~~l~~m~~~~~l~l~~p~ga~~h~~~~~rs~~re~~-tP~~m~ytlayfCltntlsai~iWtPqil  269 (412)
T TIGR02332       191 DSPDKAKWLDKEEKKALKEMIDRERLTLVSPEGAIAHAAVQQRSTLREVL-TPVVMLYTLAYFCLTNTLSAISIWTPQIL  269 (412)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88503354105678999999742022121430245565566556788987-78999999999998766766643124788


Q ss_pred             HHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             54315311--0158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r  235 VGIYQLGN--LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA  312 (398)
Q Consensus       235 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (398)
                      +....-+.  ..++..+...++.+.|-..-.|-.||...||...  .+-.......+++...+++..... ..+.....+
T Consensus       270 qsfn~Gssni~iGllaa~Pq~Cti~Gm~~Wsr~sdr~~er~~ht--~lPylfaaaGWllasatdh~~iq~-~~iimas~G  346 (412)
T TIGR02332       270 QSFNTGSSNITIGLLAAVPQICTILGMVYWSRRSDRLKERKKHT--ILPYLFAAAGWLLASATDHSLIQL-LSIIMASTG  346 (412)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC
T ss_conf             87404632678889976778999987787410034566544310--136899888888875300469999-999986200


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999998534-6676999999999999999999999999983117
Q gi|254780967|r  313 SFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFNGTT  365 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~  365 (398)
                      .+..-.++   ...-.+.. -+.|..+.++++..+++++++.+.++|.+.|.++
T Consensus       347 sf~am~if---WttPdq~isl~~ra~~~avina~Gn~Gsa~sP~~iG~lkd~tG  397 (412)
T TIGR02332       347 SFSAMAIF---WTTPDQVISLRARAVAIAVINAVGNVGSALSPLLIGILKDLTG  397 (412)
T ss_pred             HHHHHHHE---ECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf             24443210---2077621211244545444341032124677999999874024


No 81 
>PRK10207 inner membrane transporter YhiP; Provisional
Probab=99.88  E-value=2.5e-18  Score=117.57  Aligned_cols=167  Identities=14%  Similarity=0.093  Sum_probs=124.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH
Q ss_conf             99999999886576699999-9999981999889999999999999999999999998650-828999999999999999
Q gi|254780967|r    6 VIAMLMAINSLGIDIILPCL-PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTF   83 (398)
Q Consensus         6 ~l~~~~~~~~~~~~~~~p~l-p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~   83 (398)
                      .+...-+...++..-+...+ =.+.++++.|+++... +.+.|..-.-+..++.|+++||+ |+||.++.|..+.++|.+
T Consensus        18 ~lf~~E~wERFsyYGm~aiLvlyl~~~Lg~s~~~A~~-i~g~f~alvYl~pi~GG~iADr~LG~~rti~~G~il~~~G~~   96 (490)
T PRK10207         18 MIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFI-TFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYF   96 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999884999889999-999999999999986999989723407999999999999999


Q ss_pred             HHHCCC-CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             851001-1011100223210011111110001233210001--1112212233100011111111112222111111014
Q gi|254780967|r   84 IMVTIN-SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR--DMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI  160 (398)
Q Consensus        84 ~~~~a~-~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~--~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~  160 (398)
                      +.+++. +...++++-.+..+|.|..-|...+++.|.++++  ||.+++++..++.++|..++|.+.+ ++.+..||++.
T Consensus        97 ~l~~s~~~~~~~~~gL~lI~iG~Gl~Kpnis~~vg~lY~~~d~rrd~~FtiFYmgINiGa~l~~ll~g-~l~~~~G~~~~  175 (490)
T PRK10207         97 MTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP-VIADKFGYSVT  175 (490)
T ss_pred             HHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf             99865224579999999999556447887667888606889820202036999999999999999889-99988627767


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             56788888777788
Q gi|254780967|r  161 FVCMGVITTFITLW  174 (398)
Q Consensus       161 f~~~~~~~~~~~~~  174 (398)
                      |.+.++..++..+.
T Consensus       176 F~~a~igM~igli~  189 (490)
T PRK10207        176 YNLCGAGLIIALLV  189 (490)
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             77789999999999


No 82 
>KOG2563 consensus
Probab=99.88  E-value=3.6e-21  Score=133.18  Aligned_cols=389  Identities=14%  Similarity=0.112  Sum_probs=228.1

Q ss_pred             HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             38999999999988657----66999999999981999889999999999999999999999998650828999999999
Q gi|254780967|r    2 EFVIVIAMLMAINSLGI----DIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI   77 (398)
Q Consensus         2 ~~i~~l~~~~~~~~~~~----~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~   77 (398)
                      ||++++.....  .++.    -.|.|.--...+.++ |..... |..-.|++.+....++.-++.|++|-|...+++...
T Consensus        43 RW~vLl~~slL--~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~-wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~l  118 (480)
T KOG2563          43 RWVVLLAFSLL--NFSNGMQWIQYAPINNYVNSFYG-SSSAAD-WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVL  118 (480)
T ss_pred             HHHHHHHHHHH--HHCCCCHHEEEHHHHHHHHHHHC-CHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             73999999999--71472010111237779988722-127899-999899999888777788762013148899999999


Q ss_pred             HHHHHHHHHCCC------CHH--HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf             999999851001------101--110022321001111111000123321000111122122331000111111111122
Q gi|254780967|r   78 HIISTFIMVTIN------SFT--GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQA  149 (398)
Q Consensus        78 ~~i~~~~~~~a~------~~~--~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~  149 (398)
                      .+++..+-..+.      .++  ....+..+.+...-........+...|++++||+.+...-..++.+|..+|-++...
T Consensus       119 n~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppi  198 (480)
T KOG2563         119 NGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPI  198 (480)
T ss_pred             HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCE
T ss_conf             99989874101575556421135567768899876527112660787863793233434467874255878997605755


Q ss_pred             CCC-----CCCCCCH--HHHHHHHHHHHHHHHHHHHCC---CCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             221-----1111101--456788888777788876167---886402210111111233310000000002567778876
Q gi|254780967|r  150 TVA-----LSGGWIG--IFVCMGVITTFITLWYYIRFP---ETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLT  219 (398)
Q Consensus       150 l~~-----~~~gWr~--~f~~~~~~~~~~~~~~~~~~p---et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (398)
                      +..     ....|..  .|+..+.+..+..++..+..+   .++|...+.+....+..++.++.++|+++....+++++.
T Consensus       199 lV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~  278 (480)
T KOG2563         199 LVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIG  278 (480)
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             60699875116788999999999999999999997157899989766776441375789999997384569999998532


Q ss_pred             HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             31001468887654554315311015889988657677889999985001565124688778889999999987325777
Q gi|254780967|r  220 MGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP  299 (398)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (398)
                      .+.+.+........+...+-.+...+.......++.++++.+.+.+.||.+.-|.............. ..+...+....
T Consensus       279 ~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~-~~l~~~t~~~~  357 (480)
T KOG2563         279 LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT-LMLLTCTLFLG  357 (480)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCC
T ss_conf             89999999984421012667742243567999998899998887544355358999999999899999-99987510578


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH
Q ss_conf             640379989989999999999999999985-34667699999999999999999999999998311-----799999999
Q gi|254780967|r  300 IHLLIFIAFFFLASFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT-----TYPITIGFF  373 (398)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~  373 (398)
                      ..+.++..... .++......|.-.....| .+|..-|+.+++.+..+...+.+.....+...+..     .++..+...
T Consensus       358 ~~viv~~t~~~-~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  436 (480)
T KOG2563         358 DSVIVFTTCGL-LGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLT  436 (480)
T ss_pred             CEEEHHHHHHH-HHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf             46750566899-99863378885346653542456776661267763467899999999987305688787765146759


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             99999999999994220003430
Q gi|254780967|r  374 GIAVSSFICILIVEKNQMFRKTE  396 (398)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~r~~~  396 (398)
                      ...++......+.+...+++|.|
T Consensus       437 ~~~~l~~~lva~~r~~y~R~~~e  459 (480)
T KOG2563         437 VSALLGAILVAFFRPDYRRLRAE  459 (480)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998799976300567767665


No 83 
>pfam11700 ATG22 Vacuole effluxer Atg22 like. Autophagy is a major survival survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxes, which mediate the efflux of leucine and other amino acids resulting from autophagy. This family also includes other transporter proteins.
Probab=99.87  E-value=1.3e-18  Score=119.06  Aligned_cols=354  Identities=14%  Similarity=0.089  Sum_probs=193.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHCC-CC-HHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999999999999999999865082899-999999999999985100-11-0111002232100111111100012332
Q gi|254780967|r   42 HLISFYLIGYGIAQIFYGPLSDRFGRKIV-MMFGLVIHIISTFIMVTI-NS-FTGMLCMRLIQGIGGAAPRIITISIIRD  118 (398)
Q Consensus        42 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~-l~~g~~~~~i~~~~~~~a-~~-~~~l~~~r~l~G~g~~~~~~~~~a~i~~  118 (398)
                      ...+...+-.++..|+.|.++|+-|+||. +.....+..+++....+. ++ ++...+.-++.-++.....+...+++.|
T Consensus        73 ~~~sis~l~~Al~~P~lGa~AD~~~~rK~~L~~~~~l~~~~t~~l~~~~p~~~~l~~~L~iia~i~~~~s~vfyna~LP~  152 (477)
T pfam11700        73 YTFSISVLIQAVLFISLGGIADYGNYRKNLLIAFALLGGLSTILFLGVTPDQYLLGSVLYIIGNICFGASLVFYNSYLPL  152 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999998999724675109999999999999999997084369999999999999999999999988676


Q ss_pred             HHCCCCCCC--------------------------CCCCCCCEECCCCCCCCCCCCCC--------CCCCCCCCHHHHHH
Q ss_conf             100011112--------------------------21223310001111111111222--------21111110145678
Q gi|254780967|r  119 IYDGRDMAK--------------------------VLSIAMMIFMIMPILAPSIGQAT--------VALSGGWIGIFVCM  164 (398)
Q Consensus       119 ~~~~~~~~~--------------------------~~~~~~~~~~~g~~igp~ig~~l--------~~~~~gWr~~f~~~  164 (398)
                      ..+++++++                          .-+.--....+|.++...+.-.+        .+...+-|..+.+.
T Consensus       153 la~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vS~~g~a~Gy~Gg~v~l~i~l~~~~~~~~~~~~~~~~~r~~~~~~  232 (477)
T pfam11700       153 LARDDPELRASEEESADGTLSREEYDKLDSLTRTRVSSLGFALGYIGAILVLIISILILFGLGSPDQEGTLSLRLVILIA  232 (477)
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             32522000001112233433320110001445044210578898789999999999999736767742125588999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             88887777888761678864022101------111112333100000000025677788763100146888765455431
Q gi|254780967|r  165 GVITTFITLWYYIRFPETLDPRDVRP------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIY  238 (398)
Q Consensus       165 ~~~~~~~~~~~~~~~pet~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (398)
                      ++.-++..+..++.+||.+.+++.++      ...++..+.+|++.++|....+.+...+..-+..+.......+..+..
T Consensus       233 a~w~~vFslP~f~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~i~~~~~~~~FL~a~~~y~Dgl~ti~~~~~iy~~~vl  312 (477)
T pfam11700       233 GLWWLLFSIPWFLWLKDRPGPKGLPSGLNYLTAGWKQLGRTFKQARKLKDALLFLVAWFLLSDGIATVNSLAILFAKTVL  312 (477)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999985778887677775067999999999999999986778999999999998279899999999999870


Q ss_pred             CCCCCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHHHHH-HHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             531101-58899886576778899999850015651--246887788899999999-87325777640379989989999
Q gi|254780967|r  239 QLGNLF-PIAFAVGGFAMSIASFINSRLVEKFGIRR--VSHYSLLIFFMITGSWLL-VQITSNHPIHLLIFIAFFFLASF  314 (398)
Q Consensus       239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~r~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  314 (398)
                      +.+... ........+...+++++.+++.||+|.|+  ..........+++....+ ...........+.+.......+.
T Consensus       313 g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~~~~~l~~~~~i~l~g~~g~~~~~~~~~~~~~f~~~~~~~G~  392 (477)
T pfam11700       313 GMSTAALIVLSITAQLAAVLGAFLWPFLSRRFGLKTKQTLIAIIVLWELIPLYGLLGIIPNVIGFKNPWEFYVLAALYGL  392 (477)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf             98888999999999999999999999999894981389999999999999999999988621143453999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             999999999999985346-676999999999999999999999999983117-9999-9999999999999999942200
Q gi|254780967|r  315 QFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT-YPIT-IGFFGIAVSSFICILIVEKNQM  391 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~  391 (398)
                      ..|-..+...+...+..| ++.+.-.++++..+-..+.+++.+.|.+.+.+. .... .......+...+.+..+..+|-
T Consensus       393 ~~G~~qs~sRsl~~~liP~~~~~efFGly~~~gk~ss~lGP~l~g~i~~~tg~~r~g~~~l~vlf~~g~~ll~~V~~~kg  472 (477)
T pfam11700       393 VLGGLSSYSRSMYSELIPRGKEALFFSLFAITDKGSSWIGPLIVGAITDRTGNIRNAFLFLAVLFVLGLPLLLLVDVEKG  472 (477)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             86146998999999858998531486699986659999999999999998178223899999999999999810468776


Q ss_pred             HHHH
Q ss_conf             0343
Q gi|254780967|r  392 FRKT  395 (398)
Q Consensus       392 ~r~~  395 (398)
                      +|++
T Consensus       473 ~~~a  476 (477)
T pfam11700       473 RREA  476 (477)
T ss_pred             HHHH
T ss_conf             7641


No 84 
>PRK12382 hypothetical protein; Provisional
Probab=99.85  E-value=4.8e-21  Score=132.51  Aligned_cols=165  Identities=13%  Similarity=0.117  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             99886576699999999998199988999999999999999999999999865082899999999999999985100110
Q gi|254780967|r   12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF   91 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~   91 (398)
                      .+..++.......+|...++.+.+.  .+ +..+.+.....+.+++.|++.||+|+||++..|+.+.+++.+..++++|.
T Consensus       226 ~l~~~~~~~i~~f~~ly~~~~~~~~--~g-~~~~~~~~~~~l~r~~~G~l~Dr~G~~~v~~~gl~l~a~gl~~l~~~~~~  302 (393)
T PRK12382        226 ALQGVGFAVIGTFVSLYFASKGWAM--AG-FTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTA  302 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             9999999999999999998736068--99-99999999999999998289887085388999999999999999986209


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11100223210011111110001233210001111221223310001111111111222211111101456788888777
Q gi|254780967|r   92 TGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI  171 (398)
Q Consensus        92 ~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~  171 (398)
                      |.+++..++.|+|.+...|..++++.|..|+++|+++++.++....+|..+||.++| .+.+++|++.+|+..+++.++.
T Consensus       303 ~~ll~~~~l~G~G~g~~~P~l~al~~~~~~~~~rG~a~g~~~~~~dlG~~~Gp~~~G-~va~~~G~~~~F~~~av~~l~~  381 (393)
T PRK12382        303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAG-MLATSFGYPSVFLAGAISAVLG  381 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHH
T ss_conf             999999999999998878889999997589331037999999999999999999999-9999749389999999999999


Q ss_pred             HHHHHHHCC
Q ss_conf             788876167
Q gi|254780967|r  172 TLWYYIRFP  180 (398)
Q Consensus       172 ~~~~~~~~p  180 (398)
                      .....+..+
T Consensus       382 l~v~~~~~r  390 (393)
T PRK12382        382 IGVTILSFR  390 (393)
T ss_pred             HHHHHHHHC
T ss_conf             999999963


No 85 
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.85  E-value=4.4e-21  Score=132.76  Aligned_cols=172  Identities=15%  Similarity=0.187  Sum_probs=142.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999886576699999999998199988999---999999999999999999999865082899999999999999985
Q gi|254780967|r    9 MLMAINSLGIDIILPCLPKISDSLHLSNENYG---QHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIM   85 (398)
Q Consensus         9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~---~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~   85 (398)
                      ....+..+....+.|.+|...+|++.+..+..   .+..+...+...+.++..|+++||+|+|+++..+..+..++.+..
T Consensus       224 ~~~~~~~~~~~~~~~~l~~y~~~~~~~~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~~~~~~~l~~l  303 (406)
T PRK09874        224 VTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIISVLLLIPM  303 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999836544499999999999999999999999999987383999999999999999999


Q ss_pred             HCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             10011011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   86 VTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        86 ~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                      +++++.+.+.+..++.|++.+...|..++++.|..|+++|+++++..+....+|..+||.+++.+ ..++|++.+|++.+
T Consensus       304 ~~~~~~~~l~i~~~l~G~g~g~~~P~~~~~~~~~~~~~~~G~~~g~~~~~~~lG~~~GPll~G~l-~~~~G~~~~f~i~a  382 (406)
T PRK09874        304 SFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAI-SANYGFRAVFLVTA  382 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHH
T ss_conf             99975999999999999999999999999998758884777999999999999999999999999-99748599999999


Q ss_pred             HHHHHHHHHHHHHCCC
Q ss_conf             8887777888761678
Q gi|254780967|r  166 VITTFITLWYYIRFPE  181 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pe  181 (398)
                      .+.++..++.+...++
T Consensus       383 ~~~l~~~~~~~~~~r~  398 (406)
T PRK09874        383 GVVLFNAIYSWNSLRR  398 (406)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999998843


No 86 
>KOG0253 consensus
Probab=99.85  E-value=9.9e-20  Score=125.28  Aligned_cols=366  Identities=12%  Similarity=0.142  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHH--HHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             999999886576--6999--999999981999889999999999999999999999998650828999999999999999
Q gi|254780967|r    8 AMLMAINSLGID--IILP--CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTF   83 (398)
Q Consensus         8 ~~~~~~~~~~~~--~~~p--~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~   83 (398)
                      ...+.++.++-.  ++.-  ..|..++..+.+..|.. ++.+.-+.++-+++..+|..+|++|||+.........++...
T Consensus        80 ~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~-llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~  158 (528)
T KOG0253          80 FFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAP-LLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGV  158 (528)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             8886558999888999999987887742256666565-778888752214353410004044110211134777888887


Q ss_pred             HHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             85100110111002232100111111100012332100011112212233100011111111112222111111014567
Q gi|254780967|r   84 IMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC  163 (398)
Q Consensus        84 ~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~  163 (398)
                      +.+.++|+.++.+.|.+.|+|.|. .|...++-.|.-|..+|..-.-.. .-+.+|.+....+. +....+.|||+....
T Consensus       159 is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~la-w~vm~~~gwr~~l~~  235 (528)
T KOG0253         159 ISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLA-WGVMSNFGWRYLLFT  235 (528)
T ss_pred             HHCCCCCEEHHHHHHHHHHCCCCC-CCHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf             524798731146788788625788-608677787744676777210478-98877999999999-999875129999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHH----------------------------------HHCCC-----------CCCCCCC
Q ss_conf             88888777788876167886402----------------------------------21011-----------1111233
Q gi|254780967|r  164 MGVITTFITLWYYIRFPETLDPR----------------------------------DVRPL-----------NLYAILH  198 (398)
Q Consensus       164 ~~~~~~~~~~~~~~~~pet~~~~----------------------------------~~~~~-----------~~~~~~~  198 (398)
                      ... .+.......+++||+++-.                                  +++++           ..++...
T Consensus       236 ~~~-pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg  314 (528)
T KOG0253         236 SST-PLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRG  314 (528)
T ss_pred             HHH-HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHCCCCCCCC
T ss_conf             870-8999999996256574104543985779999999998448878961333002234444330000111012235554


Q ss_pred             CCCCCCCCCHHHHHH-HHHHHHHHCCHHHHHHH---HHHHHHHC-------------------CC-CCCHHHHHHHHHHH
Q ss_conf             310000000002567-77887631001468887---65455431-------------------53-11015889988657
Q gi|254780967|r  199 SFSLIFKHRASTLYN-IANSLTMGAILGFVNSS---QQIYVGIY-------------------QL-GNLFPIAFAVGGFA  254 (398)
Q Consensus       199 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~-------------------~~-~~~~~~~~~~~~~~  254 (398)
                      +...++. |.++... +.....++.-+.|+...   ..+++...                   .. +...-...-...+.
T Consensus       315 ~~~nLls-p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitsla  393 (528)
T KOG0253         315 GTTNLLS-PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLA  393 (528)
T ss_pred             CHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             4576537-677777799999997037998889999999986057455301024168776404786405578999999986


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf             677889999985001565124688778889999999987325777640379989989999999999999999985346-6
Q gi|254780967|r  255 MSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-H  333 (398)
Q Consensus       255 ~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  333 (398)
                      ...|.++.++++||+|+|+.....+.+..+.    .+........ ..  .....+..-+.....+.....++.|.+| +
T Consensus       394 efPGlLIt~~iverlGRKkTMal~l~~f~if----lfll~~c~~r-n~--~tvllf~arafisg~fqvaYvYtPEVyPTa  466 (528)
T KOG0253         394 EFPGLLITGVIVERLGRKKTMALSLILFGIF----LFLLTTCKTR-NA--YTVLLFTARAFISGAFQVAYVYTPEVYPTA  466 (528)
T ss_pred             HCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH----HHHHHHHCCC-CH--HHHHHHHHHHHHHCHHEEEEEECCCCCCHH
T ss_conf             2870667999999863135889999999999----9999985284-16--577999999998420008999567535214


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             7699999999999999999999999998311-799999999999999999999942
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQSFNGT-TYPITIGFFGIAVSSFICILIVEK  388 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  388 (398)
                      .|+++.+....+..++ ++..|+++...+.+ ..+.. .+..+.+.+.++..+.+-
T Consensus       467 vRatgvGtcSsmaRIg-gI~~p~iA~~~e~s~sl~i~-vy~~~~ilagIavcffPi  520 (528)
T KOG0253         467 VRATGVGTCSSMARIG-GIFSPVIAMRAELSTSLPIF-VYGALFILAGIAVCFFPI  520 (528)
T ss_pred             HHHCCHHHHHHHHHHH-HHHHHHHHHHHCCCEEEHHH-HHHHHHHHHHHHHEEEEE
T ss_conf             4331300356677640-13226999985165244199-998999999888546010


No 87 
>TIGR00885 fucP L-fucose:H+ symporter permease; InterPro: IPR005275    This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by at least four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. .
Probab=99.84  E-value=5.9e-19  Score=120.99  Aligned_cols=350  Identities=15%  Similarity=0.170  Sum_probs=241.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             93899999999998865766999999999981999889999999999999999999999998650828999999999999
Q gi|254780967|r    1 MEFVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII   80 (398)
Q Consensus         1 ~~~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i   80 (398)
                      ++|+++.++ .++=.++.|+=.|.+|..++-+.+|+.|.+ ++.++|..||....+|.|.+..|+..|--++.|+.++++
T Consensus         3 iPF~LitSl-FaLWg~ANditnpmv~~Fq~~f~~~a~~aa-LvQ~AFYgGYf~~aiPAa~f~~k~SYKAGillGL~LYA~   80 (427)
T TIGR00885         3 IPFVLITSL-FALWGFANDITNPMVKAFQKVFELTAFEAA-LVQVAFYGGYFIMAIPAALFIKKLSYKAGILLGLALYAL   80 (427)
T ss_pred             CHHHHHHHH-HHHHHHHHHCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             316999989-999988750021579999988406554202-666667620123565589999873468889998999999


Q ss_pred             HHHHHH---CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC--
Q ss_conf             999851---001101110022321001111111000123321000111122122331000111111111122221111--
Q gi|254780967|r   81 STFIMV---TINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG--  155 (398)
Q Consensus        81 ~~~~~~---~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~--  155 (398)
                      |..+..   -..+|..++++-++...|-++..+.++.++..+=|++...|.+.+.++.+++|.++|-.++..++....  
T Consensus        81 GAfLFwPAa~~~~y~~FLv~lfIlt~GL~fLET~aNPyil~mG~e~tatrRLNlAQsFNp~Gsi~g~~va~~lil~nl~~  160 (427)
T TIGR00885        81 GAFLFWPAAEIEEYTLFLVGLFILTAGLGFLETAANPYILVMGDEETATRRLNLAQSFNPLGSIIGMVVAQQLILSNLES  160 (427)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             88863137752351279999999996266664242863761278884210222563021578999999998988632887


Q ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             ----------------------------11014567888887777888-7616788640221011111123331000000
Q gi|254780967|r  156 ----------------------------GWIGIFVCMGVITTFITLWY-YIRFPETLDPRDVRPLNLYAILHSFSLIFKH  206 (398)
Q Consensus       156 ----------------------------gWr~~f~~~~~~~~~~~~~~-~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~  206 (398)
                                                  .-|.+|.+.+.+.+++.+++ +.+.|+- ..++.++.+..+-..+.+++.+.
T Consensus       161 ~~~D~~Gnlif~~ls~~e~~aik~sdla~~~~PY~iig~vvlav~llI~l~K~Pa~-qsDn~~~a~qisF~~~lsRla~~  239 (427)
T TIGR00885       161 QSQDVLGNLIFDKLSEEELSAIKESDLASVRTPYLIIGLVVLAVLLLIRLTKMPAL-QSDNHEDAKQISFSASLSRLARK  239 (427)
T ss_pred             CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             66425787898842978888864655766612389999999999999854137742-25772003465505899999864


Q ss_pred             CHHHHHHHHHHHHHHCCHHHHHHHHHHHH-----HHCCCCCC----HHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             00025677788763100146888765455-----43153110----15889-9886576778899999850015651246
Q gi|254780967|r  207 RASTLYNIANSLTMGAILGFVNSSQQIYV-----GIYQLGNL----FPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSH  276 (398)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~  276 (398)
                      ++++.-+++..+..+......++.-.+-.     ...|.++.    .+-.+ ....+....+.+++.++.+|+..+|+..
T Consensus       240 ~~yRegViAQffYVGvQi~CWtfii~Ya~rl~~~~~~G~~~~saevlsqqy~i~aMviF~isRFi~T~l~~yl~a~k~L~  319 (427)
T TIGR00885       240 RKYREGVIAQFFYVGVQIMCWTFIIQYAVRLIFGKTAGFAAKSAEVLSQQYNIVAMVIFIISRFIGTFLLKYLAAEKLLM  319 (427)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf             24689999999998789999999999765614784320013457888753456678777667889999998628658999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf             88778889999999987325777640379989989999999999999999985346676--9999999999999999999
Q gi|254780967|r  277 YSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLA--GTASSIFGFINTVISTILG  354 (398)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--G~a~~l~~~~~~~~~~~~~  354 (398)
                      .-    .+......+.......    .+....+......+++.+|+...+++...+|.+  |.+ +++  +.-+||++.+
T Consensus       320 ~~----Ai~g~~~~Lg~iF~~g----~~GLycL~l~SafMsl~fPTIygialkglg~d~k~Gaa-glv--MaI~GG~~~p  388 (427)
T TIGR00885       320 LY----AIIGMLLILGSIFLDG----VVGLYCLVLVSAFMSLMFPTIYGIALKGLGEDTKYGAA-GLV--MAIIGGGILP  388 (427)
T ss_pred             HH----HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH-HHH--HHHHHHHHCC
T ss_conf             99----9999999999999802----48999999997321032246899985146400001057-899--9886103201


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999998311
Q gi|254780967|r  355 IIIGQSFNGT  364 (398)
Q Consensus       355 ~~~g~~~~~~  364 (398)
                      |+-|...|..
T Consensus       389 Pl~g~iiD~~  398 (427)
T TIGR00885       389 PLQGFIIDQK  398 (427)
T ss_pred             CHHHEEECHH
T ss_conf             0140422337


No 88 
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=99.84  E-value=7.3e-20  Score=126.02  Aligned_cols=269  Identities=18%  Similarity=0.266  Sum_probs=190.9

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             999999999988657669-9999999998199988999999999999999999999999865082899999999999999
Q gi|254780967|r    4 VIVIAMLMAINSLGIDII-LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST   82 (398)
Q Consensus         4 i~~l~~~~~~~~~~~~~~-~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~   82 (398)
                      ++.+.....+-.+ .+-| .-.++.|+++|+++..+.| ++.+.|=++..+..++.....+|..|-|.+-+|.++.++++
T Consensus         5 l~~l~~~~~~Q~~-v~gy~~~~ittiEkRF~l~S~~~G-~I~s~~di~~~i~~~~vsy~G~~~hrprwig~G~~l~~lG~   82 (582)
T pfam03137         5 LLLLGLAALLQLL-VNGYFKSSITTIEKRFKISSSISG-IISSSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLLIMALGS   82 (582)
T ss_pred             HHHHHHHHHHHHH-HHHHHHEEHHHHHHHCCCCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
T ss_conf             6899999999999-877321002112443699832112-34429779999999999971752787611009899999999


Q ss_pred             HHHHCCC------------------------------------------------CHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf             9851001------------------------------------------------1011100223210011111110001
Q gi|254780967|r   83 FIMVTIN------------------------------------------------SFTGMLCMRLIQGIGGAAPRIITIS  114 (398)
Q Consensus        83 ~~~~~a~------------------------------------------------~~~~l~~~r~l~G~g~~~~~~~~~a  114 (398)
                      +++++-+                                                -+..++++.++.|+|....++.+.+
T Consensus        83 ~l~alPhFl~g~y~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~q~l~GiG~tp~~tLG~t  162 (582)
T pfam03137        83 LLTALPHFLYGPYSYESTNLTGSNESSNSTLCHGGALIPSPCQSEGCCHKEGTSLMWLLFFVAQLLRGIGATPIFTLGIS  162 (582)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCH
T ss_conf             99976786068861353445556667775334688877665665332357652089999999999851546741303611


Q ss_pred             HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-----------------CCHH----HHHHHHHHHHHHH
Q ss_conf             233210001111221223310001111111111222211111-----------------1014----5678888877778
Q gi|254780967|r  115 IIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-----------------WIGI----FVCMGVITTFITL  173 (398)
Q Consensus       115 ~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-----------------Wr~~----f~~~~~~~~~~~~  173 (398)
                      |+-|..++++.+..+++......+|+.+|-++|+..+..+.+                 |-..    |.+.+.+.++..+
T Consensus       163 YiDdnv~~~~s~~Yigi~~~~~~lGP~~Gf~lg~~~L~~yvd~~~~~~~~~~i~~~dprWvGAWWLGfli~g~~~~~~ai  242 (582)
T pfam03137       163 YIDDNVKSKNSPLYLGILFTLAMFGPAIGFLLGSFCLRLYVDFGRVPTEDVIITPTDPRWVGAWWLGFLVCGGLLLLSAI  242 (582)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             43167774557199999999987646899999998885001556688654667878814777888899999999999999


Q ss_pred             HHHHHCCCCCCHHHHCC---------------------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
Q ss_conf             88761678864022101---------------------------111112333100000000025677788763100146
Q gi|254780967|r  174 WYYIRFPETLDPRDVRP---------------------------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGF  226 (398)
Q Consensus       174 ~~~~~~pet~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (398)
                      ... ..|+..|++++++                           .+.+...+..+++++||.++...+...+......++
T Consensus       243 pl~-~FPk~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~Ll~N~~~m~~~l~~~~~~~~~~G~  321 (582)
T pfam03137       243 PFF-FFPKELPKAGRLASLDLTRPKAKDETRKQAEEPKSGKSAPRFLKDFPKSLKRLLTNPTFMLVVLAQIFESSVIAGY  321 (582)
T ss_pred             HHH-HCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             998-3851158403221122100233102232023333332011557789999999975919999999999999999889


Q ss_pred             HHHHHHHHHHHCCCCCC-HHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             88876545543153110-1588998865-7677889999985001565124
Q gi|254780967|r  227 VNSSQQIYVGIYQLGNL-FPIAFAVGGF-AMSIASFINSRLVEKFGIRRVS  275 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~  275 (398)
                      ..+.|.+.+.+++.+.. .+...+...+ +..+|.++.|++++|++.+...
T Consensus       322 ~tF~pKylE~qF~~sas~A~~l~G~i~vp~~~~G~llGG~ivkk~kl~~~~  372 (582)
T pfam03137       322 STFLPKYLETQYGQSASYANFLTGVVALPAAAVGILIGGYIIKKFKLTARG  372 (582)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH
T ss_conf             887578889882887899999998788888899987543213220767899


No 89 
>PRK11462 putative transporter; Provisional
Probab=99.84  E-value=5e-19  Score=121.41  Aligned_cols=329  Identities=12%  Similarity=0.080  Sum_probs=177.3

Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHH-HHHHHHHHHHHHHHHHCCCC------HH
Q ss_conf             9999999819998899999999999999999999999986----5082899-99999999999998510011------01
Q gi|254780967|r   24 CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIV-MMFGLVIHIISTFIMVTINS------FT   92 (398)
Q Consensus        24 ~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~-l~~g~~~~~i~~~~~~~a~~------~~   92 (398)
                      .+..+.+.+|++...+|. +...--+--++.-|+.|.++|    |+||||. +++|....++...+....|+      +.
T Consensus        32 l~~fytdv~Gl~~~~~g~-i~~i~ri~DAitDPi~G~isDrt~tr~GrrrP~il~gaip~~l~~~llf~~P~~s~~~~~~  110 (460)
T PRK11462         32 MMFFYTDIFGIPAGFVGT-MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI  110 (460)
T ss_pred             HHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf             999999960978999999-9999999999243500463016899988836678688899999999996288878118999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCCCCCCCCCCC------CCCCCCCHHHHHHH
Q ss_conf             1100223210011111110001233210-0011112212233100011111111112222------11111101456788
Q gi|254780967|r   93 GMLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPILAPSIGQATV------ALSGGWIGIFVCMG  165 (398)
Q Consensus        93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~------~~~~gWr~~f~~~~  165 (398)
                      ++.+...+...+......+-.++..|+. +++||.+..++-.....+|..++..+...+.      +...+|+....+.+
T Consensus       111 y~~v~y~l~~~~yT~~~iPy~aL~~elT~d~~ERt~l~~~R~~~~~~g~~~~~~~~~~lv~~~g~~~~~~g~~~~~~v~~  190 (460)
T PRK11462        111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS  190 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             99999999999988645368752478648999999999999999999999999999999999669843789999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             88877778887616788640221011111123331000000000256777887631001468887654554315311015
Q gi|254780967|r  166 VITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFP  245 (398)
Q Consensus       166 ~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (398)
                      ++..++..++++..+|..+++    .+..+..+.++.+++||.++.......+...+.........++.....+..+..+
T Consensus       191 vi~~i~~~~~~~~~ke~~~~~----~~~~s~~~~l~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~yy~~y~lg~~~~~~  266 (460)
T PRK11462        191 VVAFMMLAFCFFTTKERVEAP----PTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFV  266 (460)
T ss_pred             HHHHHHHHHHHHCCCCCCCCC----CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf             999999999995220366688----6642399999999738389999999999999999999998888863168789999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88998865767788999998500156512468877888999999998732577764037998998999999999999999
Q gi|254780967|r  246 IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS  325 (398)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                      .......++..++..+..++.+|.++++....+............   ....++  ........++.+.+.+...+...+
T Consensus       267 ~~~~~~~i~~li~~~l~~~l~~~~~k~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~g~~~~~~~~l~~a  341 (460)
T PRK11462        267 AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMF---FVPMQA--SITMFVFIFVIGVLHQLVTPIQWV  341 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999999999999999999999999---965332--999999999999999999999999


Q ss_pred             HHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99853-------46-676999999999999999999999999983
Q gi|254780967|r  326 ISMEP-------FS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       326 ~~~~~-------~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ...|.       .+ ++.|...+..++.+-.+.++++.+.|...+
T Consensus       342 m~aDvvDy~e~ktG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L~  386 (460)
T PRK11462        342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA  386 (460)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             866587777887198618999999999999999999999999999


No 90 
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.83  E-value=9.5e-19  Score=119.87  Aligned_cols=330  Identities=19%  Similarity=0.216  Sum_probs=202.1

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHH-HHHHHHHHHHHHHHHHCCCCH------HHH
Q ss_conf             99999819998899999999999999999999999986----5082899-999999999999985100110------111
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIV-MMFGLVIHIISTFIMVTINSF------TGM   94 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~-l~~g~~~~~i~~~~~~~a~~~------~~l   94 (398)
                      -.+.+.+|+|...+|.+....- +--++.-|+.|.++|    |+||+|. +++|....++...++..+++.      ...
T Consensus        37 ~fYTdv~Gis~~~aG~iflv~R-iiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya  115 (467)
T COG2211          37 FFYTDVFGLSAALAGTIFLVAR-IIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA  115 (467)
T ss_pred             HHHHCCCCCCHHHHHHHHHHHH-HHHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf             9996115875899999999999-999974441126530455656461189998867999999999808884556424899


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCCC-----CCCCCCCCCCC--CCCCCHHHHHHHH
Q ss_conf             00223210011111110001233210-0011112212233100011111-----11111222211--1111014567888
Q gi|254780967|r   95 LCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPIL-----APSIGQATVAL--SGGWIGIFVCMGV  166 (398)
Q Consensus        95 ~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~i-----gp~ig~~l~~~--~~gWr~~f~~~~~  166 (398)
                      ++...+.+++-.....+-.++.+++. +++||.+..++-+...++|..+     .|++ ...-..  ..||+..-.+.++
T Consensus       116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv-~~~g~~~~~~g~~~~~~~~~v  194 (467)
T COG2211         116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV-KLFGGGDKALGYQGTALVLGV  194 (467)
T ss_pred             HHHHHHHHHHHHHEECCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHH
T ss_conf             9999999999983117253146443399888788998999999899999999999999-880898510409999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             8877778887616788640221011-111123331000000000256777887631001468887654554315311015
Q gi|254780967|r  167 ITTFITLWYYIRFPETLDPRDVRPL-NLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFP  245 (398)
Q Consensus       167 ~~~~~~~~~~~~~pet~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (398)
                      ++.+..+++++..+|...+++..+. ..++..+++..+++||.+....+...+...+.....+...++.+...+.++...
T Consensus       195 i~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~  274 (467)
T COG2211         195 IGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFA  274 (467)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHH
T ss_conf             99999999998750566766667653344388899999726469999999999999999985652215888758718899


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -8899886576778899999850015651246887788899999999873257776403799899899999999999999
Q gi|254780967|r  246 -IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS  324 (398)
Q Consensus       246 -~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (398)
                       ........+...+..+.+++.+|+|+|+....+.....+......+.   .  ............+.+.+.+...+...
T Consensus       275 ~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~---~--~~~~~l~~~~~~i~~~g~~~~~~l~w  349 (467)
T COG2211         275 YLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT---P--AGSVVLIVVALIIAGVGTGIANPLPW  349 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH---C--CCCHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf             999999999999999868999999562999999999999999899851---6--76168999999999986632244328


Q ss_pred             HHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99985-------346-676999999999999999999999999983
Q gi|254780967|r  325 SISME-------PFS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       325 ~~~~~-------~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      +...|       ..+ ++.|...+.+++.+-.+.++++.+.|+..+
T Consensus       350 am~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~  395 (467)
T COG2211         350 AMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG  395 (467)
T ss_pred             HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8722414488887278702467899999999999999999999999


No 91 
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.83  E-value=2.1e-16  Score=106.90  Aligned_cols=317  Identities=17%  Similarity=0.161  Sum_probs=180.4

Q ss_pred             HHHHHHHHHHC----CCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCC--CHHHH
Q ss_conf             99999999819----998899999999999-99999999999998650-828999999999999999851001--10111
Q gi|254780967|r   23 PCLPKISDSLH----LSNENYGQHLISFYL-IGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFIMVTIN--SFTGM   94 (398)
Q Consensus        23 p~lp~i~~~l~----~s~~~~~~~~~s~~~-~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~~~~a~--~~~~l   94 (398)
                      +..-.+..+++    .++++...+ .+.|. +.| ...++.|+++||+ |+|+.+..|.++..+|.+..+.++  +...+
T Consensus        43 iL~~Yl~~~~~~gLg~~~~~A~~l-~~~y~slVY-~t~i~GG~laDrvLG~~~tI~lGail~~iGh~~L~~~~~~~~~gl  120 (498)
T COG3104          43 ILILYLYYQLGDGLGFDETHATGL-FSAYGSLVY-LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGL  120 (498)
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf             999999985166678585766889-999999999-988777888887522357799989999998999946544661089


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             002232100111111100012332100011--112212233100011111111112222111111014567888887777
Q gi|254780967|r   95 LCMRLIQGIGGAAPRIITISIIRDIYDGRD--MAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFIT  172 (398)
Q Consensus        95 ~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~--~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~  172 (398)
                      +++-.+.++|.|..-+....++.|.+|+++  |.+.+++...+.++|..++|.+-+ ++....||+..|-..++-..+ .
T Consensus       121 ~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~-~~~~~~g~~~gF~~aavGm~~-g  198 (498)
T COG3104         121 YIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITG-LLAINYGWHVGFGLAAVGMII-G  198 (498)
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH-HHHHHHCHHHHHHHHHHHHHH-H
T ss_conf             99999998366655666789889855999866577751799985048778999999-999860689999999999999-9


Q ss_pred             HHHHHHCC----CCCCHHHHCCCCCCCCCCCC-------------------------------------CCCC------C
Q ss_conf             88876167----88640221011111123331-------------------------------------0000------0
Q gi|254780967|r  173 LWYYIRFP----ETLDPRDVRPLNLYAILHSF-------------------------------------SLIF------K  205 (398)
Q Consensus       173 ~~~~~~~p----et~~~~~~~~~~~~~~~~~~-------------------------------------~~~~------~  205 (398)
                      ++.+...|    ++..+++..+.+.+......                                     .+.+      .
T Consensus       199 l~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  278 (498)
T COG3104         199 LVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFD  278 (498)
T ss_pred             HHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             99999813000477887786530044434268899999999999999889999889999999999999999860673178


Q ss_pred             CCHHHHHHHHHHHHHHCCHHHHHHHH---HHHH----HH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----
Q ss_conf             00002567778876310014688876---5455----43--15311015889988657677889999985001565----
Q gi|254780967|r  206 HRASTLYNIANSLTMGAILGFVNSSQ---QIYV----GI--YQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIR----  272 (398)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~----  272 (398)
                      +|+-....+...+....++......+   ..+.    ++  .+.+-..+...+.+.+..++.+.+..++..|.+++    
T Consensus       279 er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~p  358 (498)
T COG3104         279 ERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQP  358 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99999999999999999999987434068888977630323532158899875379999999899999984862378788


Q ss_pred             -CHHHHHHHHHHHHHHHHHHHHH---CC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf             -1246887788899999999873---25--777640379989989999999999999999985346-67699999999
Q gi|254780967|r  273 -RVSHYSLLIFFMITGSWLLVQI---TS--NHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFG  343 (398)
Q Consensus       273 -~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~  343 (398)
                       ...+.+........+.+.+...   ..  ....+.++.+...++..++-=++.|.-.+......| +..+.++++.-
T Consensus       359 s~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lvl~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wf  436 (498)
T COG3104         359 STPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWF  436 (498)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf             850589999999999999998999860688888688999999999999999728788999998684989999999999


No 92 
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.82  E-value=5.6e-20  Score=126.63  Aligned_cols=164  Identities=13%  Similarity=0.115  Sum_probs=133.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             98865766999999999981999889999999999999999999999998650828999999999999999851001101
Q gi|254780967|r   13 INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT   92 (398)
Q Consensus        13 ~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~   92 (398)
                      +...+...+.+.+|...++.|.++...   ..+.+..+..+.+++.|++.||+|+++++..+..+.+++.++.++++|.+
T Consensus       229 l~~~~~~~i~~f~~ly~~~~g~~~~~~---~~~~~~~~~~~~r~~~g~l~dr~g~~~~i~~~~~l~~~~l~ll~~~~~~~  305 (395)
T PRK05122        229 LASIGFGTIATFITLYYAARGWDGAAL---ALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLAVEILGLLLLWLAPSPW  305 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999998827313699---99999999999999832787860644899999999999999999872099


Q ss_pred             HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             11002232100111111100012332100011112212233100011111111112222111111014567888887777
Q gi|254780967|r   93 GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFIT  172 (398)
Q Consensus        93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~  172 (398)
                      ++++..++.|+|.+...|..++++.|..|+++|+++++.++....+|..+||.++|.+ .++.|++++|.+.+++.++..
T Consensus       306 ~ll~a~~l~G~G~g~~~P~l~a~~~~~~p~~~rG~a~g~~~~~~dlG~~iG~~l~G~l-a~~~G~~~~f~~~a~~~l~~~  384 (395)
T PRK05122        306 VALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFFDLSLGITGPLAGLV-ASWFGYPSIFLFAALAAALGL  384 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHH
T ss_conf             9999999999999888899999998649872457999999999999999999999999-997383689999999999999


Q ss_pred             HHHHHHCC
Q ss_conf             88876167
Q gi|254780967|r  173 LWYYIRFP  180 (398)
Q Consensus       173 ~~~~~~~p  180 (398)
                      ++.++..+
T Consensus       385 ~l~~~~~r  392 (395)
T PRK05122        385 ALTLLLKR  392 (395)
T ss_pred             HHHHHHHC
T ss_conf             99999806


No 93 
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.81  E-value=6.3e-17  Score=109.82  Aligned_cols=347  Identities=14%  Similarity=0.119  Sum_probs=204.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHCCCC--HHH-HCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             9999999999999999999986508289999-999999999998510011--011-100223210011111110001233
Q gi|254780967|r   42 HLISFYLIGYGIAQIFYGPLSDRFGRKIVMM-FGLVIHIISTFIMVTINS--FTG-MLCMRLIQGIGGAAPRIITISIIR  117 (398)
Q Consensus        42 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~-~g~~~~~i~~~~~~~a~~--~~~-l~~~r~l~G~g~~~~~~~~~a~i~  117 (398)
                      ...+...+-.++-.|+.|..+|+.|+||..+ ....+..++.....++++  .+. .++.-.+..++.....+.-.+++.
T Consensus        62 y~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~  141 (438)
T COG2270          62 YASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLP  141 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEHHHHHH
T ss_conf             99899999999999886466515787205889999999999999998089865999999999998730023300666765


Q ss_pred             HHHCCCCCCCCCCCCCCEECCCCCCCCCC------CC----C-CC------CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             21000111122122331000111111111------12----2-22------11111101456788888777788876167
Q gi|254780967|r  118 DIYDGRDMAKVLSIAMMIFMIMPILAPSI------GQ----A-TV------ALSGGWIGIFVCMGVITTFITLWYYIRFP  180 (398)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~g~~igp~i------g~----~-l~------~~~~gWr~~f~~~~~~~~~~~~~~~~~~p  180 (398)
                      |..++++.+|.-+.--....+|..+.-..      ++    . ..      .....=|..+.+.++--++..+..++..|
T Consensus       142 ~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~  221 (438)
T COG2270         142 RLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVH  221 (438)
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             40575655740233501364322099999999996065446057762367555643215778999999999808885166


Q ss_pred             CCCC----HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH-HHHHHHH
Q ss_conf             8864----0221011111123331000000000256777887631001468887654554315311015889-9886576
Q gi|254780967|r  181 ETLD----PRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAF-AVGGFAM  255 (398)
Q Consensus       181 et~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  255 (398)
                      +...    +.+.-..+.++.++.++++.++++...+.+...+..-+..+.+.....+-.+.+++++..-..+ ....+..
T Consensus       222 ~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA  301 (438)
T COG2270         222 DAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVA  301 (438)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             51224565417899999999999999962464499999999998239999999999988872812889999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf             77889999985001565124688778889999999987325777640379989989999999999999999985346-67
Q gi|254780967|r  256 SIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-HL  334 (398)
Q Consensus       256 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  334 (398)
                      ..++++.+++.+|++.|++...++......+.......    .+   ..+.....+.+...|-......++..+..| ++
T Consensus       302 ~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~----~~---~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k  374 (438)
T COG2270         302 ALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE----GE---LDFWILGLLVGTSLGGAQASSRSYLARLVPKGK  374 (438)
T ss_pred             HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCC----CC---HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf             98889999999770884260489999999999999756----60---999999999998402188888999998689852


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             69999999999999999999999999831179999999999999999999994220003430
Q gi|254780967|r  335 AGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE  396 (398)
Q Consensus       335 ~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  396 (398)
                      .|...++++..+...+..++.+++...+-+.. ...++..+.+.-.+.+....+.+..+|.|
T Consensus       375 ~~~fFglyaltgra~S~~gp~lv~v~t~iTg~-~r~g~~~i~vll~iGl~~L~~v~~~~~~~  435 (438)
T COG2270         375 EGRFFGLYALTGRAASFLGPFLVAVITQITGS-SRAGVLSIIVLLLIGLLLLLRVKVPGRRE  435 (438)
T ss_pred             CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHEEEECCCCCCC
T ss_conf             13131025441138999999999999987154-01289999999986176279603788765


No 94 
>PRK09848 glucuronide transporter; Provisional
Probab=99.81  E-value=2.5e-17  Score=112.05  Aligned_cols=325  Identities=14%  Similarity=0.128  Sum_probs=163.2

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHHH-HHHHHHHHHHHHHHHCCC-----C--HH
Q ss_conf             999999819998899999999999999999999999986----50828999-999999999999851001-----1--01
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIVM-MFGLVIHIISTFIMVTIN-----S--FT   92 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~l-~~g~~~~~i~~~~~~~a~-----~--~~   92 (398)
                      +-.+.+.+|++...+|. +....-+--++.-|+.|.++|    |+||||.. +.|....++...+....|     +  +.
T Consensus        32 ~~fyTdv~Gl~~~~vG~-i~~i~ri~DAvtDPl~G~lsDrt~tr~GrrrP~il~g~ip~~i~~~llf~~P~~~~~~~~~~  110 (457)
T PRK09848         32 LSYYTDVAGVGAAAAGT-MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV  110 (457)
T ss_pred             HHHHHHHCCCCHHHHHH-HHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf             99999861988999999-99999999993345005741069999888249999999999999999995775546308999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCCEECCCCC-----CCCCCCCCCCCCCCCCCHHHH----
Q ss_conf             1100223210011111110001233210-001111221223310001111-----111111222211111101456----
Q gi|254780967|r   93 GMLCMRLIQGIGGAAPRIITISIIRDIY-DGRDMAKVLSIAMMIFMIMPI-----LAPSIGQATVALSGGWIGIFV----  162 (398)
Q Consensus        93 ~l~~~r~l~G~g~~~~~~~~~a~i~~~~-~~~~~~~~~~~~~~~~~~g~~-----igp~ig~~l~~~~~gWr~~f~----  162 (398)
                      +.++...+.+.+......+..++..|+. +++||.+..+.-+....++..     ++|.+...-   ..++...+.    
T Consensus       111 ~~~~~yi~~~~~~T~~~iPy~aL~~elT~d~~eRt~l~~~r~i~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  187 (457)
T PRK09848        111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS---PEEMVSVYHFWTI  187 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCHHHHHHHHHHH
T ss_conf             9999999999999999846976371307999999999999999999999999999999862568---6007899999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             78888877778887616788640221011111123331000000000256777887631001468887654554315311
Q gi|254780967|r  163 CMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN  242 (398)
Q Consensus       163 ~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (398)
                      +.++...++....+...+|..++++    +..+.....+.+.+||.++...+...+...+.+.......++.....+...
T Consensus       188 i~~i~~~~~~~~~~~~~~e~~~~~~----~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~l~~~~  263 (457)
T PRK09848        188 VLAIAGMVLYFICFKSTRENVVRIV----AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTG  263 (457)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCC----CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             9999999999998535335644435----686589999999837689999999999999999999999999999937866


Q ss_pred             CHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             01588998-86576778899999850015651246887788899999999873257776403799899899999999999
Q gi|254780967|r  243 LFPIAFAV-GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS  321 (398)
Q Consensus       243 ~~~~~~~~-~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (398)
                      ..+..... ..++...+.++..++.+|+|+|+....+.....+...   ........  ..........+.+++.+....
T Consensus       264 ~~~~~~~~~~~v~~i~~~p~~~~l~~r~gKk~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~i~~~g~~~~~~  338 (457)
T PRK09848        264 LFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYL---LFFWVSVW--SLPVALVALAIASIGQGVTMT  338 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999999999999999999999999996679999999999999999---99996343--599999999999999989999


Q ss_pred             HHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999853-------46-676999999999999999999999999983
Q gi|254780967|r  322 NFSSISMEP-------FS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       322 ~~~~~~~~~-------~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ...+...|.       .+ ++.|...|..++.+-.+.++++.+.|...+
T Consensus       339 ~~~sm~aDv~Dy~e~~tG~r~eG~~~s~~sf~~K~~~a~~~~i~g~~L~  387 (457)
T PRK09848        339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG  387 (457)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999962266789996099704599999999999999999999999999


No 95 
>pfam03209 PUCC PUCC protein. This protein is required for high-level transcription of the PUC operon.
Probab=99.81  E-value=2.4e-17  Score=112.10  Aligned_cols=352  Identities=14%  Similarity=0.091  Sum_probs=192.9

Q ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHH-HHHHHHHHHHHHHHHHCC-----CC------
Q ss_conf             999819998899999999999999999999999986508-----2899-999999999999985100-----11------
Q gi|254780967|r   28 ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG-----RKIV-MMFGLVIHIISTFIMVTI-----NS------   90 (398)
Q Consensus        28 i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G-----rr~~-l~~g~~~~~i~~~~~~~a-----~~------   90 (398)
                      |..|+++...-++ ..++...+- ....+.+|..||+.+     ||.. +..|....+.+..+..++     .+      
T Consensus         6 MIvEL~~pA~lv~-~lval~~lv-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~a~~a~~~l~~~~~~~~~   83 (402)
T pfam03209         6 MIVELAVPASLVG-IMIALPLLV-APFRALIGFRSDTHRSALGWKRTPYIWLGTLLQAGGLAIMPFALIVLSGQGEAVGA   83 (402)
T ss_pred             HHHHHCHHHHHHH-HHHHHHHHH-HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             7997122789999-999999999-99999975452577666878862678998999999999999999998567422333


Q ss_pred             -HH----HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH-
Q ss_conf             -01----110022321001111111000123321000111122122331000111111111122221111110145678-
Q gi|254780967|r   91 -FT----GMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM-  164 (398)
Q Consensus        91 -~~----~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~-  164 (398)
                       .|    ...+.-.+.|+|.+...++..++++|..++|||+|+.++.-...-+|.+++..+.+.+++.+..-|..-.+. 
T Consensus        84 ~~~~g~~~a~laF~l~Glgv~a~~T~~lALlad~t~e~~R~~~v~i~w~Mli~G~ivtA~i~g~lL~~fs~~rLi~v~~~  163 (402)
T pfam03209        84 PTWAGLILAALAFLLVGLGVHMSQTVGLALATDLADEEDRPKVVGLMYVMLLVGIIVSAITVGWLLADFSPARLIQVIQG  163 (402)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             15999999999999996566275578999998538865669999999999999999999999997564699999999999


Q ss_pred             -HHHHHHHHHHHHHHCCCCCCHHHH--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             -888877778887616788640221--01111112333100000000025677788763100146888765455431531
Q gi|254780967|r  165 -GVITTFITLWYYIRFPETLDPRDV--RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG  241 (398)
Q Consensus       165 -~~~~~~~~~~~~~~~pet~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (398)
                       +++..+..++..+.. |.+.++..  ++.+..+..+.++++.++|+...+....++.+..++.--.....+--+.++++
T Consensus       164 ~a~i~~~l~~~A~wg~-E~r~~~~~~~~~~~~~~f~~a~~~~~~~p~ar~F~~fv~l~~la~~mQD~iLEPygg~VFGms  242 (402)
T pfam03209       164 VALATMVLNVIALWKQ-EARRPSRPREEPRPEPSFLEAWLLFVAEPQARRFLFFLGLGTLAFFMQDVLLEPYGGEVFGLT  242 (402)
T ss_pred             HHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
T ss_conf             9999999999998356-667755456777789659999999983987300277999999999842012476402560778


Q ss_pred             C-CHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             1-01588998865767788999998-500156512468877888999999998732577764037998998999999999
Q gi|254780967|r  242 N-LFPIAFAVGGFAMSIASFINSRL-VEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI  319 (398)
Q Consensus       242 ~-~~~~~~~~~~~~~~~~~~~~~~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (398)
                      . ++....+....+..++-.+.+++ .+|.++++....++................    ...+.+....++.+++.|..
T Consensus       243 v~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~~li~a~~~----~~~~~l~~~v~l~G~g~G~f  318 (402)
T pfam03209       243 VGETTKLTAFFAGGTLVGFGLAGRVLSRGLDPFRMAGWGCAVGLPAFLALIFSALL----GNVALFVAGTLLIGFGAGLF  318 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHCCHHH
T ss_conf             65769999999889999999999998657775889999999999999999998743----65138999999999702188


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999998534-6676999999999999999999999999983-------117999999999999999999999
Q gi|254780967|r  320 NSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFN-------GTTYPITIGFFGIAVSSFICILIV  386 (398)
Q Consensus       320 ~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  386 (398)
                      ........++.. +++.|+..+..+..|.....+...+-|..-|       +...++...|..=.+..++.....
T Consensus       319 ~v~al~~mM~la~~~~aG~~mG~WGaaQA~A~Glg~~~Gg~~~Dl~~~l~~~~~~aY~~VF~lEa~l~~~a~~ll  393 (402)
T pfam03209       319 GHATLTAMMDLAPEERAGTALGAWGAAQATAAGLAILLGGVLRDLVRALAGNPATAYGLVFALEALLLIITIFVL  393 (402)
T ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999998168876415898797999999979999999999999998616975278999999999999999997


No 96 
>KOG2325 consensus
Probab=99.77  E-value=4e-19  Score=121.94  Aligned_cols=241  Identities=16%  Similarity=0.146  Sum_probs=156.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH
Q ss_conf             89999999999886576699999-99999-8199988999999999999999999999999865082-899999999999
Q gi|254780967|r    3 FVIVIAMLMAINSLGIDIILPCL-PKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGR-KIVMMFGLVIHI   79 (398)
Q Consensus         3 ~i~~l~~~~~~~~~~~~~~~p~l-p~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~g~~~~~   79 (398)
                      -+.+....+.+.....+++.|.. |.+++ |.+.+.+..| +++++.-++.+++.+.+|..+.|.+. |+.++.|.++..
T Consensus        35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG-~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~  113 (488)
T KOG2325          35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFG-LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAI  113 (488)
T ss_pred             HHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCHHH-HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             5999999999996221488840325443148998732102-999998889886011500242356775147799999999


Q ss_pred             HHHHHH-HC---CC-CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf             999985-10---01-10111002232100111111100012332100011112212233100011111111112222111
Q gi|254780967|r   80 ISTFIM-VT---IN-SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS  154 (398)
Q Consensus        80 i~~~~~-~~---a~-~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~  154 (398)
                      +++++. ..   .+ ..+.++++|++.|+|.+... ...++++|....++|.|+++..+.+..+|.++||.++..+....
T Consensus       114 ~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg  192 (488)
T KOG2325         114 IGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLG  192 (488)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999986242307799999997575751199-99999971367210299999851289999998677999873016


Q ss_pred             -CC--------C---CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHH-HH
Q ss_conf             -11--------1---014567888887777888761678864022101111112333100000000-0256777887-63
Q gi|254780967|r  155 -GG--------W---IGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRA-STLYNIANSL-TM  220 (398)
Q Consensus       155 -~g--------W---r~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~  220 (398)
                       .|        |   ..+=|+.+++.++..++.....+|...+.++++.+..+..+.-.+-.+.++ -|...+.+.+ .+
T Consensus       193 ~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~  272 (488)
T KOG2325         193 EKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRF  272 (488)
T ss_pred             CCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             77549868643870262999999999999999875125303475554224623210213443047812789999999999


Q ss_pred             HCCHHH---HHHHHHHHHHHCCCCCCHH
Q ss_conf             100146---8887654554315311015
Q gi|254780967|r  221 GAILGF---VNSSQQIYVGIYQLGNLFP  245 (398)
Q Consensus       221 ~~~~~~---~~~~~~~~~~~~~~~~~~~  245 (398)
                      ...+.+   .+..+......+++.....
T Consensus       273 ~~~~~~~~iet~~~~~~m~~y~w~~~~a  300 (488)
T KOG2325         273 VVNFIATTIETLSSALTMVMYGWTGSEA  300 (488)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHCCCCCHH
T ss_conf             9888998787312147788760341368


No 97 
>KOG2816 consensus
Probab=99.77  E-value=7.5e-17  Score=109.40  Aligned_cols=335  Identities=16%  Similarity=0.189  Sum_probs=186.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             65766999999999981999889999999999----99999999999999865082899999999999999985100110
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNENYGQHLISFY----LIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF   91 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~----~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~   91 (398)
                      +..+.+.+..+..+..++..............    .+...+..+..|.++||+|||..+........+..+...+..  
T Consensus        36 l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--  113 (463)
T KOG2816          36 LSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--  113 (463)
T ss_pred             HCCCHHHHHHHHHHCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf             377203445555431136555421201321102231367899889988887787778988999999987668867878--


Q ss_pred             HHHCCCCCCCCCCCC--CCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             111002232100111--111100012332100011112212233100011111111112222111111014567888887
Q gi|254780967|r   92 TGMLCMRLIQGIGGA--APRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT  169 (398)
Q Consensus        92 ~~l~~~r~l~G~g~~--~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~  169 (398)
                      |++++   +.|+..+  .......++++|....++|...+++.+..+..+..++|.+++.+.. ..|.-.+|++..+...
T Consensus       114 ~~~~~---~~~l~G~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~-~~~~a~~f~ia~~~~~  189 (463)
T KOG2816         114 YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK-FLGIALVFLIAAASGI  189 (463)
T ss_pred             HHHHH---HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HCCHHHHHHHHHHHHH
T ss_conf             76554---1035540578767676675202117899999999999999999899987210566-4471245589999999


Q ss_pred             HHHHHHHHHCCCCCCHHHHCCCCC----------CCC---CCCCCCCCCCCHHHHHHHHHHHHHHCCH-HHHHHHHHHHH
Q ss_conf             777888761678864022101111----------112---3331000000000256777887631001-46888765455
Q gi|254780967|r  170 FITLWYYIRFPETLDPRDVRPLNL----------YAI---LHSFSLIFKHRASTLYNIANSLTMGAIL-GFVNSSQQIYV  235 (398)
Q Consensus       170 ~~~~~~~~~~pet~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  235 (398)
                      +..+.....+||+..++++...+.          ...   .+..+..-.+|..+...+...+...... ......+.+..
T Consensus       190 ~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~  269 (463)
T KOG2816         190 LSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLK  269 (463)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             99999874155434641014443344577765507777778765126877304899999999987874365203899996


Q ss_pred             HHCCCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             4315311-015889988657677889999-98500156512468877888999999998732577764037998998999
Q gi|254780967|r  236 GIYQLGN-LFPIAFAVGGFAMSIASFINS-RLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS  313 (398)
Q Consensus       236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
                      ..+++++ .++...+.......++..+.. .+...++.++....++.......   ..... ..++...+....   ...
T Consensus       270 ~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~---~~~af-~~~~w~~~~~~v---~~~  342 (463)
T KOG2816         270 AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQL---LLFAF-ATETWMMFAAGV---VVA  342 (463)
T ss_pred             EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HHHHH-HHCCHHHHHHHH---HHH
T ss_conf             10576888899999999899999999999999999743203345777999999---99998-403046689889---887


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999-8534667699999999999999999999999998311
Q gi|254780967|r  314 FQFGLINSNFSSIS-MEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT  364 (398)
Q Consensus       314 ~~~~~~~~~~~~~~-~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~  364 (398)
                      . .....|...+.. ....++.+|.+.++...++...+.+.+.+.+.++..+
T Consensus       343 ~-~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t  393 (463)
T KOG2816         343 L-AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT  393 (463)
T ss_pred             H-CCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             2-04307778767875316454633124999999875365799988999998


No 98 
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter; InterPro: IPR001927   It has been shown  that integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. This collection of sequences represents the sodium: galactoside symporter family (SGF).   Like sugar transport proteins, these integral membrane proteins are predicted to comprise twelve membrane spanning domains. ; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0016020 membrane.
Probab=99.77  E-value=1e-15  Score=103.15  Aligned_cols=334  Identities=17%  Similarity=0.231  Sum_probs=210.1

Q ss_pred             HHHHHHHHCCCHHHHH----HHHHHHHHH---HHHHHHHHHHHHHH------HCCC-HHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999998199988999----999999999---99999999999986------5082-89999999999999998510011
Q gi|254780967|r   25 LPKISDSLHLSNENYG----QHLISFYLI---GYGIAQIFYGPLSD------RFGR-KIVMMFGLVIHIISTFIMVTINS   90 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~----~~~~s~~~~---~~~i~~~~~G~l~D------r~Gr-r~~l~~g~~~~~i~~~~~~~a~~   90 (398)
                      +-.+.+.+|+|.+.+|    -++.+.+++   --++.-|+.|.+.|      |+|+ ||-+++|....++-++++-..++
T Consensus        23 ~~fyTDv~G~~a~~~G~n~~iLiTtlflV~Ri~dAi~DP~~G~~vD~T~~I~rwGKFRPw~L~Ga~p~~~~~vL~F~~~~  102 (470)
T TIGR00792        23 LFFYTDVLGLSAAIVGANKLILITTLFLVARILDAITDPIMGLIVDRTRNITRWGKFRPWLLIGAIPFAIVLVLLFTTPD  102 (470)
T ss_pred             HHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCC
T ss_conf             99886215684311234532678999999999999833467567524458887964330002017899999999982457


Q ss_pred             HH----------HHCCCCCCCCCCCCCCCCCCHHHHHHH-HCCCCCCCCCCCCCCEECCCC-----CCCCCC---CCCC-
Q ss_conf             01----------110022321001111111000123321-000111122122331000111-----111111---1222-
Q gi|254780967|r   91 FT----------GMLCMRLIQGIGGAAPRIITISIIRDI-YDGRDMAKVLSIAMMIFMIMP-----ILAPSI---GQAT-  150 (398)
Q Consensus        91 ~~----------~l~~~r~l~G~g~~~~~~~~~a~i~~~-~~~~~~~~~~~~~~~~~~~g~-----~igp~i---g~~l-  150 (398)
                      +.          ...+...+.|+.-+....+--+++..+ -+++||.+.-++-+...++|.     ..-|.+   |+.- 
T Consensus       103 ~~~~~n~~~~~v~a~~tYi~~g~~Ys~~niPy~sl~p~~T~d~~ER~~l~~~r~~~a~~G~~~~~~~~~P~~~~~~~~~~  182 (470)
T TIGR00792       103 FSATGNPIGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGISA  182 (470)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             55431177899999999999846622101362103543257831002120187899999999999999999986066546


Q ss_pred             -CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
Q ss_conf             -211111101456788888777788876167886--40221011111123331000000000256777887631001468
Q gi|254780967|r  151 -VALSGGWIGIFVCMGVITTFITLWYYIRFPETL--DPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV  227 (398)
Q Consensus       151 -~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (398)
                       -++..||+..-.+.++++.+....+++..||..  ++.++++.+..+..+.++.+.+|++.....+..-+...+...-.
T Consensus       183 ~~~~~~G~~~~~~i~~~~g~~~~~~c~~~tkE~~~~~~~~~~~~~~~~~~~~~~~l~~N~qL~~l~~~~l~~~~a~~i~~  262 (470)
T TIGR00792       183 GEDDKLGWFMFALILALIGVVLLIICFFGTKERVSVSEIPKKSEKKLSLKKIFKALFKNDQLLILCLAYLFYLLAFNIKN  262 (470)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             88885058999999999999999987167732131033211356778689999998528889999999999999999876


Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf             887654554315311015889988-6576778899999850015651246887788899999999873257776403799
Q gi|254780967|r  228 NSSQQIYVGIYQLGNLFPIAFAVG-GFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFI  306 (398)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (398)
                      ...-++++-..+..+.+....... .....++..+.+++.+|+++|+....+.....+...........    .+.....
T Consensus       263 ~~~~YYf~Yvlg~~~lf~~~~~~~~~~~~l~~~~l~P~l~k~~grk~~~~~~~~~~~~g~l~~~~~~~A----~~~~~~~  338 (470)
T TIGR00792       263 GVQVYYFTYVLGDPELFSILGLIAFIGAGLIGVLLFPRLVKKFGRKRLFLIGILLMVLGLLILFFVGKA----SNLPLIL  338 (470)
T ss_pred             HHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_conf             563023457746678999999999999999999878778876125999999999999999999873167----7999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH----HHHH--HHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89989999999999999999----9853--4667------6999999999999999999999999983
Q gi|254780967|r  307 AFFFLASFQFGLINSNFSSI----SMEP--FSHL------AGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~------~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ....+.+++.....+.....    ..|.  ++|.      -|.+.|...+..=.++++++.+.|....
T Consensus       339 ~~~~~~~~~~~~~~~~~w~~~vi~~~D~VdYGE~k~G~R~Eg~~~S~~~f~~K~G~A~~g~~~G~~L~  406 (470)
T TIGR00792       339 VLIIIAGFGQNFVTGLVWALQVIMVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG  406 (470)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999988776778987888864420232210201485507999999999999988998999999999


No 99 
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.76  E-value=4.2e-18  Score=116.32  Aligned_cols=160  Identities=16%  Similarity=0.149  Sum_probs=128.7

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
Q ss_conf             69999999999819998899999999999999999999999986508289999999999999998510011011100223
Q gi|254780967|r   20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRL   99 (398)
Q Consensus        20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~   99 (398)
                      .+..-+|.+.++.|.+..+.+ +..+.+.++..++.+..|+++||+|||+.+........++.......++...+.+.-+
T Consensus       238 ~~~~wlP~~l~~~g~s~~~a~-~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  316 (406)
T PRK11551        238 FLLNWLPSLLIAQGLSRSQAG-LVQIAFNIGGALGSLLIGALMDRLRPSRVVLGMYAGILASLAALAAAPGFAGMALAGF  316 (406)
T ss_pred             HHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999998599888999-9999999999999999999998836399999999999999999999877999999999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             21001111111000123321000111122122331000111111111122221111110145678888877778887616
Q gi|254780967|r  100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRF  179 (398)
Q Consensus       100 l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~  179 (398)
                      +.|++.....+...++.+|.+|++.|+++++..+....+|..++|.+.+.+++...+|...|.......++..+..++..
T Consensus       317 ~~g~~~~~~~~~~~~~~~e~~p~~~rgt~~G~~~~~g~lG~~igP~~~G~ll~~~g~~~~~~~~~~~~~~~~~~~~l~l~  396 (406)
T PRK11551        317 AAGLFVVGGQSVLYALAPLFYPTQMRGTGVGAAVAVGRLGSMAGPLAAGQLLALGRSTAGVIGASIPVILVAALAALLLV  396 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999987859899999999999999999999999999998118899999999999999999999984


Q ss_pred             C
Q ss_conf             7
Q gi|254780967|r  180 P  180 (398)
Q Consensus       180 p  180 (398)
                      +
T Consensus       397 ~  397 (406)
T PRK11551        397 S  397 (406)
T ss_pred             C
T ss_conf             9


No 100
>KOG4686 consensus
Probab=99.76  E-value=3.8e-18  Score=116.53  Aligned_cols=352  Identities=16%  Similarity=0.157  Sum_probs=196.8

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHH---HCCCCHHHHCCCCCCCC
Q ss_conf             99998199988999999999999999999999999865-082899999999999999985---10011011100223210
Q gi|254780967|r   27 KISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR-FGRKIVMMFGLVIHIISTFIM---VTINSFTGMLCMRLIQG  102 (398)
Q Consensus        27 ~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~g~~~~~i~~~~~---~~a~~~~~l~~~r~l~G  102 (398)
                      +...|.+++.++.. ++.|.|.....+-..+.|++.|| +|-|..-++-.....++.+..   +.++.+|.+..+|++-|
T Consensus        69 ~fk~d~ni~~akft-LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG  147 (459)
T KOG4686          69 DFKLDSNIEYAKFT-LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG  147 (459)
T ss_pred             HHHCCCCCCEEEEE-EEEEECCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEC
T ss_conf             53046653413324-54432217877776541121101230347789999999997899982208989999985131432


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC------C---HHHHHHHHHHHHHHH
Q ss_conf             0111111100012332100011112212233100011111111112222111111------0---145678888877778
Q gi|254780967|r  103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW------I---GIFVCMGVITTFITL  173 (398)
Q Consensus       103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW------r---~~f~~~~~~~~~~~~  173 (398)
                      +|+-...+.-+.++.-|+++||.+-++++....-.+|..+--.+-..+.+ ..+=      +   ......+.......+
T Consensus       148 IGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~-~~~~~~~~~ghT~LG~~l~~~~~tc~~sl  226 (459)
T KOG4686         148 IGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD-TMGRMFPGVGHTLLGLWLCFEVKTCKQSL  226 (459)
T ss_pred             CCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             37323364523234878627430401567888987606200134088999-99976542028899999999999999999


Q ss_pred             HHHH--HCCCCCCHH----HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHH
Q ss_conf             8876--167886402----210111111233310000000002567778876310014688876545543153110-158
Q gi|254780967|r  174 WYYI--RFPETLDPR----DVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPI  246 (398)
Q Consensus       174 ~~~~--~~pet~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  246 (398)
                      ....  -.-|.+.++    ++.+........+.+ -+ .|.+|...+++.+.+.+.+.|+...|.++++.++.+.. .+.
T Consensus       227 ical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~-~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~  304 (459)
T KOG4686         227 ICALSLGLSDDRAERILHLEEGFLGEEPKLTDVN-TF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGN  304 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
T ss_conf             9999853266678888765317666876113565-56-763999999999999998777642377778761887542244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89988657677889999985001565124688778889999999987325777640379989989999999999999999
Q gi|254780967|r  247 AFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSI  326 (398)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      ..+.......+.+.+.+.++||+|.+-..........+..-..+...  ...   .+...   ...+.+.++........
T Consensus       305 i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~ls---Py~~m---~~lGLsysllAcslWP~  376 (459)
T KOG4686         305 ILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLS---PYTSM---TFLGLSYSLLACSLWPC  376 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHH--HCC---HHHHH---HHHHHHHHHHHHHHHHH
T ss_conf             56645534335245677767652664215789999999876667753--415---79889---99850088899887433


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---HHHHHHHHHHHHHHHHHCCH
Q ss_conf             985346-676999999999999999999999999983117--99999---99999999999999994220
Q gi|254780967|r  327 SMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT--YPITI---GFFGIAVSSFICILIVEKNQ  390 (398)
Q Consensus       327 ~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~  390 (398)
                      .....| ++.|++.+....+++.+=++.+.+.|.+.|+..  .....   ....+++.+...+....|++
T Consensus       377 va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq  446 (459)
T KOG4686         377 VASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQ  446 (459)
T ss_pred             HHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC
T ss_conf             4663778770406889999985115587554412666888604699999999999999988885200323


No 101
>pfam05631 DUF791 Protein of unknown function (DUF791). This family consists of several eukaryotic proteins of unknown function.
Probab=99.73  E-value=5.5e-17  Score=110.16  Aligned_cols=243  Identities=15%  Similarity=0.097  Sum_probs=162.2

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
Q ss_conf             99999999819998899999999999999999999999986508289999999999999998510011011100223210
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQG  102 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G  102 (398)
                      |-+-.+-++++.++.+++.+-++.|.-+ ++...+.|.++||+||||..+.-..++.++++ .-.++|+..++++|++-|
T Consensus        55 PY~Y~LY~~yg~~~~~Ia~Lfv~GF~Ss-~~fgt~vG~laD~~GRk~~cl~yc~~y~lsCl-tk~s~~~~vLllGRvLGG  132 (354)
T pfam05631        55 PYVYYLYSSYGFSKGDIGILFIAGFGSS-MLFGTIVGSLADKQGRKRACLTYCILYILSCI-TKHSPNYKVLMIGRFLGG  132 (354)
T ss_pred             CCHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHH
T ss_conf             5539989974998999999999998889-99998888888751740679999999999999-886464099999988612


Q ss_pred             CCCCCCCCCCHHH-HHHHH----CCCCCCCCCCCCC-CEECCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             0111111100012-33210----0011112212233-10001111111111222211-1111014567888887777888
Q gi|254780967|r  103 IGGAAPRIITISI-IRDIY----DGRDMAKVLSIAM-MIFMIMPILAPSIGQATVAL-SGGWIGIFVCMGVITTFITLWY  175 (398)
Q Consensus       103 ~g~~~~~~~~~a~-i~~~~----~~~~~~~~~~~~~-~~~~~g~~igp~ig~~l~~~-~~gWr~~f~~~~~~~~~~~~~~  175 (398)
                      ++.+....+--++ +.|..    |++..++-++... .++++-.+++..++..+.+. ..|-..+|.....+..+..+.+
T Consensus       133 isTSLLFSaFESWlV~Eh~~~gf~~~wL~~TFs~a~flgNgivAI~AGl~an~lv~~~~~gpvaPF~~A~~~L~i~~~~i  212 (354)
T pfam05631       133 IATSLLFSAFESWLIAEHNKRGFSDQWLSTTFSKAAFLGNGLVAIISGLFANLLADRFGFGPVAPFDAAACFLAIGMAII  212 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             89888888899999989872799888999999999995430999999999999998608898783699999999999999


Q ss_pred             HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             761678864022101111112333100000000025677788763100146888-7654554315311015889988657
Q gi|254780967|r  176 YIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNS-SQQIYVGIYQLGNLFPIAFAVGGFA  254 (398)
Q Consensus       176 ~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  254 (398)
                      ....+|..-+.++++...++..+..+.+.+||+.+...++..+.-+.++.|... .|.+  +..+...-.+..|+.....
T Consensus       213 ~~~W~ENyG~~s~~~~~~~~~~~a~~~i~~d~~il~LG~iQSLFEgsMYiFVFlWTPaL--~~~~~~iP~GlIFs~FM~a  290 (354)
T pfam05631       213 LNTWSENYGDPSDKKDLKEQFKVAAQAIASDPNVFCLGLVQSLFEGSMYTFVFLWTPAL--SPNDEEIPHGFIFATFMLA  290 (354)
T ss_pred             HCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCC--CCCCCCCCCEEHHHHHHHH
T ss_conf             74440205997665026789999999997280179999999998876875055643653--8999999950139989999


Q ss_pred             HHHHHHHHHHHHHCC
Q ss_conf             677889999985001
Q gi|254780967|r  255 MSIASFINSRLVEKF  269 (398)
Q Consensus       255 ~~~~~~~~~~l~~r~  269 (398)
                      .++|+.+.+++.+|.
T Consensus       291 ~MlGSslf~~l~~~~  305 (354)
T pfam05631       291 SMLGSSVAARLLQRH  305 (354)
T ss_pred             HHHHHHHHHHHHHCC
T ss_conf             998779999998703


No 102
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.72  E-value=2.6e-17  Score=111.97  Aligned_cols=157  Identities=16%  Similarity=0.235  Sum_probs=119.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC
Q ss_conf             65766999999999981999889999999999999999999999998650828999999999999999851001101110
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML   95 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~   95 (398)
                      +......-.+|...++.|.|+++.+. .++.+.+|-.+.|.+.|+++||+|||+++..+.....++.+...   +.+.+.
T Consensus       214 ~~~~~~~sl~Pvy~~~~Gls~~~ia~-~~~~~~~Gg~l~Q~PiG~LSDr~dRr~vl~~~~~~~~~~~~~~~---~~~~~~  289 (381)
T PRK03633        214 IVLGSLYGLMPLYLNHQGMSNASIGF-WMAVLVSAGILGQWPMGRLADRFGRLLVLRVQVFVVILGSIAML---SQAAMA  289 (381)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HHHHHH
T ss_conf             99999998889999984998889999-99999999999982459998873729999999999999999999---889999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             02232100111111100012332100011112212233100011111111112222111111014567888887777888
Q gi|254780967|r   96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWY  175 (398)
Q Consensus        96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~  175 (398)
                      ..-++.|.+....++.+.+...|..+++|...+.+.....+++|.++||.+.+...+ ..|-+..|+..+.+.++.....
T Consensus       290 ~~lf~~G~~~~~lY~l~lA~~~d~~~~~~~v~a~a~~~~~~~~Gsi~GP~~ag~~M~-~~G~~~lf~~~a~~~l~~~~~~  368 (381)
T PRK03633        290 PALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQ-NYSDNLLFIMIASVSFIYLLML  368 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHH
T ss_conf             999999999854799999998662778889999999999998198872899999999-8581289999999999999999


Q ss_pred             HH
Q ss_conf             76
Q gi|254780967|r  176 YI  177 (398)
Q Consensus       176 ~~  177 (398)
                      +.
T Consensus       369 ~r  370 (381)
T PRK03633        369 LR  370 (381)
T ss_pred             HH
T ss_conf             99


No 103
>TIGR00902 2A0127 MFS transporter, phenyl propionate permease (PPP) family; InterPro: IPR005276    This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. .
Probab=99.72  E-value=3.7e-14  Score=94.54  Aligned_cols=355  Identities=14%  Similarity=0.147  Sum_probs=225.9

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-----HHHHHHHHCCC
Q ss_conf             8657669999999999819998899999999999999999999999986508289999999999-----99999851001
Q gi|254780967|r   15 SLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIH-----IISTFIMVTIN   89 (398)
Q Consensus        15 ~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~-----~i~~~~~~~a~   89 (398)
                      ..+.++++|..|.--+.-+.+++..|.++-+.+ +.-..|+++..+..++=.|   ++.++=+.     .+......-+|
T Consensus        17 y~~YG~FLPF~~~WLK~~~~~~E~IGL~~G~~~-~~RF~G~Ll~~~~~~~~~~---~I~ALR~LAL~~~~~~~A~~~~AH   92 (388)
T TIGR00902        17 YFAYGVFLPFFSVWLKSIQLTEETIGLLLGAAL-VARFLGSLLIASLVKDASR---LIIALRLLALLSLLIAVAFSLVAH   92 (388)
T ss_pred             HHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             987400211256675246766379999999999-9998768887442044478---999999999999999999999999


Q ss_pred             CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             10111002232100111111100012332100011112212233100011111111112222111111014567888887
Q gi|254780967|r   90 SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT  169 (398)
Q Consensus        90 ~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~  169 (398)
                      |+|.+++.--+-....+...|...++.+.|  .|+-+--.|-+-...+.+.++|..+-|.+++ ..|.|.+.+++...  
T Consensus        93 ~~WLll~~IGly~~~~S~~~P~~D~LA~TW--Q~Q~~LDYGKVRL~GS~AF~~G~~~~G~l~~-~~~~~~I~~~LT~~--  167 (388)
T TIGR00902        93 VAWLLLVAIGLYALVFSALVPLTDALASTW--QKQIGLDYGKVRLIGSVAFVLGVVLFGKLVT-MVDERVILALLTLL--  167 (388)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHH--
T ss_conf             999999999988876316785245566535--5533876433446677999988888621353-33147999999999--


Q ss_pred             HHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             77788876167886402210111111233310000000002567778876310014688876545543153110158899
Q gi|254780967|r  170 FITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFA  249 (398)
Q Consensus       170 ~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (398)
                      +........++.|.+|+++.+++..+....+-.++|||..|....+.++.-+.--+|..++..+-+...-.....+...+
T Consensus       168 ~~~~~~~~L~~PTI~P~~~~~~~~~~~~~~~~AL~~nP~~~R~l~~V~L~QG~HAAYY~yS~IYW~~~G~S~S~~~~LW~  247 (388)
T TIGR00902       168 LAFYLLIFLLKPTIQPKDEIREDEVTNDVAFLALLKNPQTLRVLIAVGLLQGAHAAYYVYSAIYWTAIGISVSAVSLLWS  247 (388)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999846899998777630001136666535366058899999887424799999999999998477888989998


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf             886576778899999850015651246887788899999999873257776403799899899999999-9999999998
Q gi|254780967|r  250 VGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGL-INSNFSSISM  328 (398)
Q Consensus       250 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  328 (398)
                      +..++.++--.++.|+.+|.+.+.+....-+   .+..=+.......    ..+.......+-+..+.. ........+.
T Consensus       248 ~GV~AE~~~F~lS~~LF~~~S~~~lL~ISA~---~~V~RW~~~G~~~----~l~~~~~~Q~lH~~Ty~VCH~A~~RYI~~  320 (388)
T TIGR00902       248 LGVLAEVVLFALSRKLFRRISIRVLLLISAL---AGVVRWAVIGAIE----DLPLLILLQLLHSLTYAVCHLAIVRYIAA  320 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             7999999999998889876339999999998---8888888887888----88999999999865899999999998743


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             5346676999999999999999-999999999983117999999999999999999999422
Q gi|254780967|r  329 EPFSHLAGTASSIFGFINTVIS-TILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKN  389 (398)
Q Consensus       329 ~~~~~~~G~a~~l~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (398)
                      ++..|.. .-.++++.+.+.+. ++...+.|.++...+..   .|..+++++..++++.+|.
T Consensus       321 ~~~S~~~-~LQ~~Y~~~~~G~~IAI~T~~AG~~Y~~~~~~---~F~~M~~~A~~A~F~~P~~  378 (388)
T TIGR00902       321 RQQSEVI-KLQALYSALANGVLIAIFTVIAGFLYQYLGAG---VFVVMALVALAAFFLIPKK  378 (388)
T ss_pred             CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHCCCCC
T ss_conf             8873114-78889988850079999999998873005634---7789999998886404541


No 104
>TIGR00887 2A0109 phosphate:H+ symporter; InterPro: IPR004738 In yeast the high-affinity transporter for external inorganic phosphate is not essential since a constitutive, low-affinity transporter exists. The induction of the yeast protein is depressed by phosphate starvation.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=99.72  E-value=1e-17  Score=114.18  Aligned_cols=353  Identities=15%  Similarity=0.139  Sum_probs=192.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC--------HHHHCCCCCCCCCCCCCCCCCCH
Q ss_conf             9999999999999999999986508289999999999999998510011--------01110022321001111111000
Q gi|254780967|r   42 HLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINS--------FTGMLCMRLIQGIGGAAPRIITI  113 (398)
Q Consensus        42 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~--------~~~l~~~r~l~G~g~~~~~~~~~  113 (398)
                      ++-..-..|..+||+.+|.++|++|||+++=.-+.+.+++++..+.++.        ..+++..|+++|+|.|.-+|.+.
T Consensus        70 ~~~~sa~~Gt~~GQL~FG~laD~~GRK~vYG~el~i~i~at~a~~l~~~si~~~~~~~~~~~f~R~~lG~GIGGDYPLSa  149 (557)
T TIGR00887        70 AVKVSASIGTLAGQLFFGWLADILGRKRVYGLELIIMIVATVASALSAGSISSPTSVVATLCFWRVILGVGIGGDYPLSA  149 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf             56533443267888876764110143001113445787766886504510010367777986567687158777603558


Q ss_pred             --HHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC--------------CCCC----------------CCHHH
Q ss_conf             --123321000111122122331000111111111122221--------------1111----------------10145
Q gi|254780967|r  114 --SIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA--------------LSGG----------------WIGIF  161 (398)
Q Consensus       114 --a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~--------------~~~g----------------Wr~~f  161 (398)
                        .+.+|....|+||..++.+-+.-++|.+.|.++.-.+..              ....                ||.+-
T Consensus       150 f~~ItSEfA~~K~RGA~~aaVFAmQGfG~LagaiVal~v~~~F~~~l~~~~~~~~~~g~~rlqfGla~~~a~D~~WR~~~  229 (557)
T TIGR00887       150 FQIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSWRLQFGLACVPAVDYMWRILI  229 (557)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEE
T ss_conf             87888532253234789999999888879999999999998520123664321043144412332345665154121125


Q ss_pred             HHH-----------HHHHHHHHHHHHHHCCCCCCHH---------------------------H--------HCCCCCC-
Q ss_conf             678-----------8888777788876167886402---------------------------2--------1011111-
Q gi|254780967|r  162 VCM-----------GVITTFITLWYYIRFPETLDPR---------------------------D--------VRPLNLY-  194 (398)
Q Consensus       162 ~~~-----------~~~~~~~~~~~~~~~pet~~~~---------------------------~--------~~~~~~~-  194 (398)
                      -.-           ..+........-..+|||.+..                           +        +...+.+ 
T Consensus       230 g~GsksyenskalnsAvp~~~~lYfRl~~PEt~RYt~~V~~~~~~Aa~D~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  309 (557)
T TIGR00887       230 GFGSKSYENSKALNSAVPALLALYFRLTIPETPRYTADVAKDVEQAASDIEAVLQKKIEAESDEATRINAVEKASTAVET  309 (557)
T ss_pred             ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             02653202345565433335675305888877320023553278889999987502112550578999999998875303


Q ss_pred             ----CCCCCCCCCCCCCHHHHH---HH----HHHHHHHCCHHHHHHHHHHHHHHCCCC-C----C----HH------HHH
Q ss_conf             ----123331000000000256---77----788763100146888765455431531-1----0----15------889
Q gi|254780967|r  195 ----AILHSFSLIFKHRASTLY---NI----ANSLTMGAILGFVNSSQQIYVGIYQLG-N----L----FP------IAF  248 (398)
Q Consensus       195 ----~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~----~~------~~~  248 (398)
                          -.+++.+..+++-.-|..   .+    ..++.-.++++.--....++... +++ +    .    +-      ..-
T Consensus       310 ~d~h~PKas~~df~~~~~~~~~g~~LLGTa~sWF~LDiAFYG~~Ln~~~IL~~I-Gys~~~~~~~nlray~~l~~~AvGn  388 (557)
T TIGR00887       310 LDNHVPKASWSDFFTHFSKWRHGKLLLGTAVSWFLLDIAFYGVNLNQKVILSAI-GYSPTAAKNNNLRAYEELYKTAVGN  388 (557)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             125788887335777776664444565577889999999973214434565116-7887531012589999999988999


Q ss_pred             HHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98865-76778899999850015651246887788899999999873257776403799899899999999999999999
Q gi|254780967|r  249 AVGGF-AMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSIS  327 (398)
Q Consensus       249 ~~~~~-~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      .+..+ +...|-+++-.++|++||+.+-..+..+.++....+............-..+++.+ .....+.-..||.++..
T Consensus       389 ~iI~laG~vPGYWvtVf~vD~~GRk~IQl~GF~ilT~lf~vlg~ay~~~~~~~~riG~~~~y-vl~qFF~NFGPN~TTFi  467 (557)
T TIGR00887       389 LIIALAGTVPGYWVTVFLVDILGRKPIQLMGFIILTVLFIVLGFAYNHLSEHDNRIGLLAIY-VLAQFFANFGPNATTFI  467 (557)
T ss_pred             HHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-HHHHHHCCCCCCCCCEE
T ss_conf             99999732787336400100020168874148999999999713456788887420478889-99998506888875214


Q ss_pred             --HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------H--HHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             --85346-67699999999999999999999999998311------------7--9999999999999999999994220
Q gi|254780967|r  328 --MEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGT------------T--YPITIGFFGIAVSSFICILIVEKNQ  390 (398)
Q Consensus       328 --~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~~~~~  390 (398)
                        -|.+| +.|+|+-|+..+.+=+|+.++...+..+.+..            .  -.....+..+....++.-+++++.+
T Consensus       468 VPgEvFPtR~RST~HGiSAA~GK~GAIig~~~f~~l~~~~~~~~tD~G~p~~~~~~~vl~i~~~~m~lG~~~TlLiPEtk  547 (557)
T TIGR00887       468 VPGEVFPTRYRSTAHGISAASGKIGAIIGQFAFSYLADHGAPTKTDKGYPTGIWVGNVLEIFALFMFLGILFTLLIPETK  547 (557)
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             07600486645103379999878899999999998616787654568888888734399999999988788852055668


Q ss_pred             HHHHHH
Q ss_conf             003430
Q gi|254780967|r  391 MFRKTE  396 (398)
Q Consensus       391 ~~r~~~  396 (398)
                      .+-=.|
T Consensus       548 gk~LEE  553 (557)
T TIGR00887       548 GKSLEE  553 (557)
T ss_pred             CCCHHH
T ss_conf             888684


No 105
>pfam03092 BT1 BT1 family. Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.70  E-value=5.6e-15  Score=99.08  Aligned_cols=333  Identities=11%  Similarity=0.030  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHCC----CCHHH
Q ss_conf             9999999981999889999999999999999999999998650-----82899999999999999985100----11011
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----GRKIVMMFGLVIHIISTFIMVTI----NSFTG   93 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----Grr~~l~~g~~~~~i~~~~~~~a----~~~~~   93 (398)
                      +..+.+++|+|+|+++.. ...+...++..+ .+++|.++|.+     .||+=++++.++..++.+..+.-    ++.+.
T Consensus        11 a~~~~~kd~~~~spa~~q-~~~~i~~lPW~i-Kpl~G~lSD~~Pi~GyrRr~Yl~l~~~l~~~~~l~la~~~~~~~s~~~   88 (425)
T pfam03092        11 STQFMLKDRLGIDPARYQ-RLSGLATLPWVI-KPFTGVLSDGFALFGYRRRPYLALSGLLGGAFALSYGLLPAKESSAAV   88 (425)
T ss_pred             HHHHHHHHHCCCCHHHHH-HHHHHHHCCHHH-HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf             888998853198999999-999999662899-888999761320157754499999999999999999982377542999


Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             1002232100111111100012332100011--11221223310001111111111222211111101456788888777
Q gi|254780967|r   94 MLCMRLIQGIGGAAPRIITISIIRDIYDGRD--MAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFI  171 (398)
Q Consensus        94 l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~--~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~  171 (398)
                      ..+.-++..+|.+...+.+.+.+.|..+++.  ++...++......+|.+++..++|.+++ ..++|..|.+.+.+.++.
T Consensus        89 a~~~l~l~s~g~a~~DV~~Da~vvE~~r~~~~~~~~lqS~~~~~~~~G~ll~~~lsG~l~~-~~~~~~~f~i~~~lpll~  167 (425)
T pfam03092        89 AAAFIFLSSLGKALVDVLSDALYSERGRQEPLAGPSLVSWIWGCSAVGGIIGSVLSGPLLD-TFKPQISFLVTAALQLLT  167 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
T ss_conf             9999999999999999865466300542077645440009999999999999999999998-558427899999999999


Q ss_pred             HHHHHHHCCCCCCHHHHCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHC---CCC
Q ss_conf             7888761678864022101------111112333100000000025677788763100146888765455-431---531
Q gi|254780967|r  172 TLWYYIRFPETLDPRDVRP------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYV-GIY---QLG  241 (398)
Q Consensus       172 ~~~~~~~~pet~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~  241 (398)
                      .+...+ ++|.+..+..++      ...++..++.++.++.|..+...+...+.............+++. +..   +.+
T Consensus       168 ~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~p~l~~~~~~~~~~~~~~~~~F~~~t~~~~gp~F~  246 (425)
T pfam03092       168 CVDAAV-LKEEEVLGLGRPPVPCLLGLNREVISRNWKAFRYPEILAPTLTWISFWAAPLVIAKADMFYYQTNELGGPNFS  246 (425)
T ss_pred             HHHHHH-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCC
T ss_conf             999884-0122233446786203326799999999999907699999999999987205667545899984367888759


Q ss_pred             C-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH----CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             1-0158899886576778899999850015651246887788899999999873----2577764037998998999999
Q gi|254780967|r  242 N-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQI----TSNHPIHLLIFIAFFFLASFQF  316 (398)
Q Consensus       242 ~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  316 (398)
                      . ..+.......++..++..+..+..+++.-|+...............-.....    ...-+..+....- -.+.....
T Consensus       247 ~~f~g~~~~ig~l~~l~gi~ly~~~l~~~~~R~~~~~t~l~~~~~~l~dlilV~r~N~~~GIpD~~f~lgd-~il~~~i~  325 (425)
T pfam03092       247 YSFYGTVKVIGSIAGLLGVTLYNRFLKKHPYRLTFGVTTVLQVLSGLFDLILVKRWNRYLGISDHVYILGD-SIILEVLY  325 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHCCCCCEEEEEEH-HHHHHHHH
T ss_conf             99997999999999999999999997359899999999999999974230245631030066860798756-79999999


Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999985-3466769999999999999999999999999
Q gi|254780967|r  317 GLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIGQS  360 (398)
Q Consensus       317 ~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~  360 (398)
                      .+..-+...+..+ +++..-|+..++...+.+.+..+.+.+-+.+
T Consensus       326 ~l~~mP~lvL~arLCP~G~E~T~yAlL~si~Nlg~~~s~~lG~~l  370 (425)
T pfam03092       326 MLKFMPFLVLLARLCPRGSESTVFALLASIANLGQIVSSSLGALL  370 (425)
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999878997089999999999986799999999999


No 106
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69  E-value=1.7e-16  Score=107.48  Aligned_cols=164  Identities=20%  Similarity=0.234  Sum_probs=109.1

Q ss_pred             HHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH---HHCCCCHHHHC
Q ss_conf             69999999-999819998899999999999999999999999986508289999999999999998---51001101110
Q gi|254780967|r   20 IILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFI---MVTINSFTGML   95 (398)
Q Consensus        20 ~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~---~~~a~~~~~l~   95 (398)
                      +...-+|. +.+.+|.+..+.- +......+++.+..++.|.++||+|||++++.+.+...+....   ..-.++.+..+
T Consensus       268 ~~~~y~ptyl~~~l~~s~~~~~-~~~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P~f~ll~~~~~~~i~  346 (490)
T PRK10642        268 MLLTYMPSYLSHNLHYSEDHGV-LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIF  346 (490)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             9999999999980299877899-999999999999999999999882648999999999999999999998479699999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHH
Q ss_conf             0223210011111110001233210001111221223-3100011111111112222111111014-5678888877778
Q gi|254780967|r   96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIA-MMIFMIMPILAPSIGQATVALSGGWIGI-FVCMGVITTFITL  173 (398)
Q Consensus        96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~-~~~~~~g~~igp~ig~~l~~~~~gWr~~-f~~~~~~~~~~~~  173 (398)
                      ++..+.++..++......++.+|.||.+-|...+++- +.+..+| ..+|.+..++++.+.++-.+ |++ ...+++.++
T Consensus       347 ~~~~il~~~~~~~~g~~~a~l~ElFPt~vR~TG~~~~Ynl~~~~g-G~tP~I~t~Li~~Tg~~~~pa~Yl-~~~a~i~li  424 (490)
T PRK10642        347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIA-GLTPTLAAWLVESSQNLMMPAYYL-MVVAVIGLI  424 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHH
T ss_conf             999999999999988999999986887067798879999999999-899999999999879970899999-999999999


Q ss_pred             HHHHHCCCCCCHHH
Q ss_conf             88761678864022
Q gi|254780967|r  174 WYYIRFPETLDPRD  187 (398)
Q Consensus       174 ~~~~~~pet~~~~~  187 (398)
                       ....+|||..++-
T Consensus       425 -a~~~~~ET~~~pL  437 (490)
T PRK10642        425 -TGVTMKETANRPL  437 (490)
T ss_pred             -HHHHCCCCCCCCC
T ss_conf             -9995642489999


No 107
>TIGR00882 2A0105 oligosaccharide:H+ symporter; InterPro: IPR000576 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) . The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli .; GO: 0005403 hydrogen:sugar symporter activity, 0006810 transport, 0016020 membrane.
Probab=99.68  E-value=8.3e-14  Score=92.62  Aligned_cols=351  Identities=14%  Similarity=0.147  Sum_probs=204.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH---HHHHHHC
Q ss_conf             9988657669999999-99981999889999999999999999999999998650828999999999999---9998510
Q gi|254780967|r   12 AINSLGIDIILPCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHII---STFIMVT   87 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i---~~~~~~~   87 (398)
                      .+-.+..+.+-|.+|. +.|-.|+|.++.| .+.|.-.+...+.|++.|.++||.|-||-+++......+   --.+..+
T Consensus        12 FlyFfim~~~fpf~piWL~~~~gl~kt~tG-i~fs~~sl~si~Fqp~~G~~sDkLGLkK~LlW~is~lLvlfaPFfiyVf   90 (397)
T TIGR00882        12 FLYFFIMSAYFPFFPIWLKDVNGLTKTETG-IVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISLLLVLFAPFFIYVF   90 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999998853347788422547776357-7888899999987666400201235506899999999998615998986


Q ss_pred             CC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             01----1011-100223210011111110001233210001111221223310001111111111222211111101456
Q gi|254780967|r   88 IN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFV  162 (398)
Q Consensus        88 a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~  162 (398)
                      .|    |++. .+.+-+..|+.-.+..+...+++-+.....+  --.|..-+...+|.+++..++|.+-+.  +-+..||
T Consensus        91 ~PLL~~Ni~~G~l~Gg~y~G~~f~AG~Ga~eayiEkvsR~~~--FEYG~aR~fGc~GwAlcA~~~GIlF~i--~p~~~FW  166 (397)
T TIGR00882        91 APLLQSNILVGALVGGLYLGFVFSAGAGAIEAYIEKVSRNSN--FEYGKARMFGCVGWALCASIAGILFSI--DPSIVFW  166 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC--CCCCEEEEEEECHHHHHHHHCCEEEEC--CCCHHHH
T ss_conf             779998999999986999877873257346888978752479--840017888721378776530300300--6641457


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHH----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHH
Q ss_conf             78888877778887616788640221----01111112333100000000025677788763100146888-76545543
Q gi|254780967|r  163 CMGVITTFITLWYYIRFPETLDPRDV----RPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNS-SQQIYVGI  237 (398)
Q Consensus       163 ~~~~~~~~~~~~~~~~~pet~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  237 (398)
                      .....+++..++.+..-||+.+..+.    ...+..-..+...+++|+|++|...+...-....+-.|-.. -+..+...
T Consensus       167 l~S~~a~~l~~ll~~~k~~~~~~A~V~~a~gAn~~~~~~~~~~~lFr~r~~W~f~lyvvGv~~~YdvFDQQlFa~Ff~~f  246 (397)
T TIGR00882       167 LGSGFALILMLLLMVAKPKSSDSAEVANALGANASAISLKDALELFRQRRLWVFVLYVVGVACVYDVFDQQLFAVFFKGF  246 (397)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHH
T ss_conf             88999999999997616998726899998733800016789999717998657888666100023101210037786554


Q ss_pred             CCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             1531----101588998865767788999998500156512468877888999999998732577764037998998999
Q gi|254780967|r  238 YQLG----NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLAS  313 (398)
Q Consensus       238 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
                      ++.+    +.+|...+..-+....--...+++++|.|.|+....+..++.+=........       ..+..++.=.+-.
T Consensus       247 F~~~~~Gtr~fGy~tt~ge~lnA~iMf~~P~iiNRiG~KNaLLiag~IM~~RI~gssf~~-------~~~ev~~lK~LH~  319 (397)
T TIGR00882       247 FATPQQGTRVFGYVTTAGELLNALIMFCAPLIINRIGAKNALLIAGLIMAVRILGSSFAT-------TAVEVVILKMLHA  319 (397)
T ss_pred             HCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_conf             057677627665301288999999998703776166715899999999999999888776-------6999999999888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999998534667-699999999--99999999999999999831179999999999
Q gi|254780967|r  314 FQFGLINSNFSSISMEPFSHL-AGTASSIFG--FINTVISTILGIIIGQSFNGTTYPITIGFFGI  375 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~-~G~a~~l~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  375 (398)
                      +...+......-+.....+++ ..|.. +++  ........+.+...|.++|+.++.-.....++
T Consensus       320 ~EvPfllvg~FKYi~~~F~~rLSaTiy-LiGF~~~kqla~i~LS~~~G~lyd~~Gfq~~yl~lg~  383 (397)
T TIGR00882       320 LEVPFLLVGAFKYITSVFDKRLSATIY-LIGFQFAKQLAAILLSTFAGNLYDRIGFQTAYLVLGC  383 (397)
T ss_pred             HHHHHHHHHHHHHEECCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             762689864554111111552256788-9999998888899999877767630244799999999


No 108
>KOG3626 consensus
Probab=99.67  E-value=9.1e-17  Score=108.95  Aligned_cols=269  Identities=17%  Similarity=0.237  Sum_probs=196.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             89999999999886576699999999998199988999999999999999999999999865082899999999999999
Q gi|254780967|r    3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST   82 (398)
Q Consensus         3 ~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~   82 (398)
                      +++.+......-.+..+.+...+..|.+.|+++.++.| ++.+.|=++..+...+.....-|..|-|.+-+|.++.++++
T Consensus        98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG-~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs  176 (735)
T KOG3626          98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSG-LIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS  176 (735)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE-EEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
T ss_conf             99999999999875444233311213441378877611-67640231100124767775334676234550613999999


Q ss_pred             HHHHCCC------------------C---------------------------------HH-HHCCCCCCCCCCCCCCCC
Q ss_conf             9851001------------------1---------------------------------01-110022321001111111
Q gi|254780967|r   83 FIMVTIN------------------S---------------------------------FT-GMLCMRLIQGIGGAAPRI  110 (398)
Q Consensus        83 ~~~~~a~------------------~---------------------------------~~-~l~~~r~l~G~g~~~~~~  110 (398)
                      +++++-+                  +                                 .+ .++++.++.|+|....++
T Consensus       177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t  256 (735)
T KOG3626         177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT  256 (735)
T ss_pred             HHHHCHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99956187548536667655135567732011223157744457777763223667751578999999970067788746


Q ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC------------------CHHHHHHHHHHHHHH
Q ss_conf             00012332100011112212233100011111111112222111111------------------014567888887777
Q gi|254780967|r  111 ITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW------------------IGIFVCMGVITTFIT  172 (398)
Q Consensus       111 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW------------------r~~f~~~~~~~~~~~  172 (398)
                      .+.+|+-|...+++....+++......+|+++|-++|+..+..+.++                  -.-|++.+.+.++..
T Consensus       257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a  336 (735)
T KOG3626         257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA  336 (735)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             87742145756456708999999999860499999999987713344668888788894146688899999999999999


Q ss_pred             HHHHHHCCCCCCHHHH-------C--CC-------------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             8887616788640221-------0--11-------------111123331000000000256777887631001468887
Q gi|254780967|r  173 LWYYIRFPETLDPRDV-------R--PL-------------NLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSS  230 (398)
Q Consensus       173 ~~~~~~~pet~~~~~~-------~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (398)
                      +..+ ..|.+.|++++       +  +.             ..+...+..+++++||.++...+...+-...+.+|.++.
T Consensus       337 ~p~f-~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFl  415 (735)
T KOG3626         337 VPLF-FFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFL  415 (735)
T ss_pred             HHHH-HCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8998-386568632122002331024445666667842226689999999999669548999999999998875688762


Q ss_pred             HHHHHHHCCCCCC-HHHHHHHHHH-HHHHHHHHHHHHHHCCCCCC
Q ss_conf             6545543153110-1588998865-76778899999850015651
Q gi|254780967|r  231 QQIYVGIYQLGNL-FPIAFAVGGF-AMSIASFINSRLVEKFGIRR  273 (398)
Q Consensus       231 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~  273 (398)
                      |.++..+++.+.. .....+...+ +..+|.++.|++.+|+..+.
T Consensus       416 PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~  460 (735)
T KOG3626         416 PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA  460 (735)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             899999818877787888644314343543310002333313566


No 109
>PRK10054 putative MFS-type transporter YdeE; Provisional
Probab=99.65  E-value=1.3e-15  Score=102.66  Aligned_cols=149  Identities=11%  Similarity=0.044  Sum_probs=83.5

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHCCCCCCCCCCCCCC
Q ss_conf             98199988999999999999999999999999865082899999999999999985100-11011100223210011111
Q gi|254780967|r   30 DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-NSFTGMLCMRLIQGIGGAAP  108 (398)
Q Consensus        30 ~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-~~~~~l~~~r~l~G~g~~~~  108 (398)
                      .+-+.++...+ +..+...+...+.|++..+..+|+++|+.+..|..++.++.....++ ++++.+.+.-++..+|+...
T Consensus       237 ~~~~~~~~~~~-~l~~~N~v~Vv~lq~~v~r~~~~~~~~~~l~~G~ll~~~g~~~~~~~~~~~~~~~i~~~ifTiGE~i~  315 (395)
T PRK10054        237 ADSDFAEKVVA-VVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNNLLFWGMSAAVFTVGEIIY  315 (395)
T ss_pred             HCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             11465098999-99999999999989999999851681599999999999999999998778999999999999999998


Q ss_pred             CCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             1100012332100011112212233100011111111112222111111014567888887777888761678
Q gi|254780967|r  109 RIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE  181 (398)
Q Consensus       109 ~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pe  181 (398)
                      .|..++.++|..|+++|++.++..+..+ +|..+||.+|+.+++...+| ..|+..+++..+..++.+.-.+|
T Consensus       316 ~P~~~~~v~~laP~~~RG~Y~g~~sl~~-lG~~igP~~gG~ll~~~~~~-~~f~~~~~~~~~~~l~~~~g~~~  386 (395)
T PRK10054        316 APGEYMLIDNIAPPGMKASYFSAQSLGW-LGAAVNPLVSGVILTTLPPW-SLFVILALAIVAAWLLMLKGMRA  386 (395)
T ss_pred             HCCHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             6559999987399340325898999999-99999999999999872666-99999999999999999726678


No 110
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.65  E-value=1.2e-15  Score=102.76  Aligned_cols=37  Identities=27%  Similarity=0.468  Sum_probs=19.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             9999999999999999999865082899999999999
Q gi|254780967|r   43 LISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHI   79 (398)
Q Consensus        43 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~   79 (398)
                      ..+.+.+|..++..+...+.+.+|-|.++.+|.+...
T Consensus       147 ~~~g~~~G~~la~~l~~~~~~~~GWR~~F~ig~lp~l  183 (426)
T PRK12307        147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVL  183 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             9998699999999999998557784999999999999


No 111
>TIGR00903 2A0129 major facilitator 4 family protein; InterPro: IPR005277   The MFS is a very old, large and diverse superfamily that includes several hundred sequenced members. They catalyze uniport, solute:cation (H+ or Na+) symport and/or solute:H+ or solute:solute antiport. Most are of 400-600 amino acyl residues in length and possess either 12 or 14 putative transmembrane a-helical spanners. They exhibit specificity for sugars, polyols, drugs, neurotransmitters, Krebs cycle metabolites, phosphorylated glycolytic intermediates, amino acids, peptides, osmolites, nucleosides, organic anions, inorganic anions, etc. They are found ubiquitously in all three kingdoms of living organisms. The generalized transport reactions catalyzed by MFS porters are:    (1)Uniport: S (out) S (in).   (2)Symport: S (out) + [H+ or Na+] (out) ---> S (in) + [H+ or Na+] (in).   (3)Antiport: S1 (out) + S2 (in) S1 (in) + S2 (out), (S1 may be H+ or a solute)    This family of proteins are uncharacterised proteins from archaea, which may be major facilitators. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. .
Probab=99.63  E-value=5.2e-14  Score=93.76  Aligned_cols=353  Identities=15%  Similarity=0.209  Sum_probs=205.1

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHCCCC
Q ss_conf             699999999998199988999999999999999999999999865082899999999999999985100-1101110022
Q gi|254780967|r   20 IILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-NSFTGMLCMR   98 (398)
Q Consensus        20 ~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-~~~~~l~~~r   98 (398)
                      .|.|.+...+||+++|.+++|.+.+ .|-+.+-+-.+|+|.+-||==|| -+.+|.+....+...--.. -||+|+++|+
T Consensus         9 TySPV~~LV~E~~~VS~E~~GLLA~-~YP~~FL~LTIPSG~LLDR~F~~-Wl~~G~~~T~~A~~~RL~~Pl~Y~WLL~CQ   86 (368)
T TIGR00903         9 TYSPVLSLVAEDLDVSKELLGLLAV-VYPIAFLILTIPSGLLLDRDFKR-WLLVGVLLTFAAAVLRLLDPLSYEWLLVCQ   86 (368)
T ss_pred             EHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             2100357765223443888989999-99999999860422443266768-999999999988998730500078999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32100111111100012332100011112212233100011111111112222111111014567888887777888761
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~  178 (398)
                      +...+|.-.....-..+.++.+ +|||....|..+..+.+|.+-+-.-| ..+-...|-++.-.=.++.+....++...-
T Consensus        87 ~~~ALGQPlLLN~F~P~AS~~~-~ERR~~V~S~LSl~MYLG~~yAL~~G-~~~YT~~GL~~L~~P~A~V~~A~~~L~~~~  164 (368)
T TIGR00903        87 LLAALGQPLLLNAFVPAASTLR-EERRDLVVSLLSLAMYLGIVYALAAG-LKLYTALGLTLLILPIAVVAAASVVLVLIA  164 (368)
T ss_pred             HHHHHCCHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9986154157762123001335-13578999999999999999998757-999998558999878999988899999986


Q ss_pred             CCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             67886402210111111233310000000002567778876310014688876545543153110158899886576778
Q gi|254780967|r  179 FPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIA  258 (398)
Q Consensus       179 ~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (398)
                      +|. .+.++.+....|...++++.+.++|+.|....+.++....+-..-.+...- ....+.++..|-..++..+...+|
T Consensus       165 ~~A-~~~~~~~~lGfkd~V~~F~~~~~R~DLW~~G~ILGlGVA~FDNl~~WL~~A-L~~~GL~~~AG~~VALA~~~GL~G  242 (368)
T TIGR00903       165 LRA-LRFTKAESLGFKDVVKEFRLLLKRKDLWLLGLILGLGVALFDNLAIWLEAA-LRSKGLEDVAGDAVALALLLGLVG  242 (368)
T ss_pred             HHC-CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             311-110012346458899987886403238989899976899987899998762-071461121024999999982401


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-H
Q ss_conf             89999985001565124688778889999999987325777640379989989999999999999999985----346-6
Q gi|254780967|r  259 SFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISME----PFS-H  333 (398)
Q Consensus       259 ~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~  333 (398)
                      --+.+.=+-|.+-|.......  ..+++..+.......+    -.....+..+.|    +.+-+.....||    -.+ |
T Consensus       243 VAVIP~RV~R~~LR~~Y~R~~--~~L~A~ly~~LAl~~~----~~~~~~l~~~~G----L~MLPAY~~IM~WI~~y~D~~  312 (368)
T TIGR00903       243 VAVIPDRVVRVNLRSIYIRAI--ALLVAVLYLILALELS----RLLLFALLGLAG----LLMLPAYAVIMDWISKYYDKR  312 (368)
T ss_pred             EEECCCCEEEHHHHHHHHHHH--HHHHHHHHHHHHHHHH----HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCC
T ss_conf             314487303300689999999--9999999999998888----999999875778----886115889998764540642


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             76999999999999999999999999983117999999999999999999999422
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKN  389 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (398)
                      ..|.+.|.+|+.+.....-...-...+.. ++-.++.......-++++..++++..
T Consensus       313 ~~G~A~G~~Gl~SR~~~V~L~~~A~~F~S-S~~~YFTyL~~~~T~AF~~~LLLP~D  367 (368)
T TIGR00903       313 LQGKAAGAVGLVSRILSVALALAATLFLS-SAELYFTYLAVLITVAFILALLLPSD  367 (368)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             04430215888999999999999999853-48899999999999999999708899


No 112
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61  E-value=3e-15  Score=100.56  Aligned_cols=158  Identities=9%  Similarity=0.076  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf             99999999981999889999999999999999999999998650828999999999999999851001101110022321
Q gi|254780967|r   22 LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ  101 (398)
Q Consensus        22 ~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~  101 (398)
                      ...+|.+.++++.++.+.| +..+...+|..++.+..+++.|+.++++.+..+.....++....+++++++...+.-++.
T Consensus       243 ~~l~p~~~~~l~~~~~~~G-~l~aa~gvG~llG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (416)
T PRK10489        243 RVLYPALADNWQMSAAQIG-LLYAAIPLGAAIGALTSGWLAHSRRPGLLMLLSTLGSFLAIGLFGLMPMWILGVACLALF  321 (416)
T ss_pred             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999998089878999-999999999999999999852456638999999999999999998615999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             00111111100012332100011112212233100011111111112222111111014567888887777888761678
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPE  181 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pe  181 (398)
                      |++.+...+...+++.+..|+|.|+|.++........+..+|+.++|.+ .+..|-+..+.+.+...++.........|+
T Consensus       322 G~~~~~~~v~~~t~iQ~~~P~~~rGRV~s~~~~~~~~~~plG~~~~G~l-a~~~G~~~~~~~~g~~~~~~~~~~~~~~~~  400 (416)
T PRK10489        322 GWLSAISSLLQYTLLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGL-GAMMTPVASASASGFGLAIIGVLLLLVLGE  400 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf             9999999999999999859999875999999999999899899999999-999778999999999999999999997714


No 113
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.61  E-value=3.4e-15  Score=100.27  Aligned_cols=156  Identities=16%  Similarity=0.159  Sum_probs=82.3

Q ss_pred             HHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--CCCCHHHHCCCCCCC
Q ss_conf             999-99981999889999999999999999999999998650828999999999999999851--001101110022321
Q gi|254780967|r   25 LPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV--TINSFTGMLCMRLIQ  101 (398)
Q Consensus        25 lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~--~a~~~~~l~~~r~l~  101 (398)
                      +|. +.++.|.+..+... ......++..++.+..|.++||+||||.+..+.....+..+...  -.++.+.+.+.-++.
T Consensus       291 lPt~L~~~~g~~~~~~~~-~~~~~~lg~~vG~l~~g~L~DriGrr~~~~~~~l~~~~~~~~l~~~~~~~~~~l~~l~f~~  369 (486)
T PRK03893        291 LPTYLKTDLGYDPHTVAN-VLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQ  369 (486)
T ss_pred             HHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             999999751888889999-9999999999999999999989485899999999999999999997564699999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHCC
Q ss_conf             001111111000123321000111122122331000111111111122221111110145678-8888777788876167
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCM-GVITTFITLWYYIRFP  180 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~-~~~~~~~~~~~~~~~p  180 (398)
                      ++.....+...+++.+|.||.+-|+...|+......+|.+++|.+++.+.+ ..|--...... ..++.+..++.-+.+|
T Consensus       370 ~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vGRlG~ii~P~i~g~L~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~p  448 (486)
T PRK03893        370 QMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ-RLGLGTALGSLSFSLTFVVILLIGLDMP  448 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             999999999999998874889698899999999999999999999999987-0895189999999999999999995077


Q ss_pred             CC
Q ss_conf             88
Q gi|254780967|r  181 ET  182 (398)
Q Consensus       181 et  182 (398)
                      |+
T Consensus       449 ~~  450 (486)
T PRK03893        449 SR  450 (486)
T ss_pred             HH
T ss_conf             98


No 114
>PRK03545 sugar efflux transporter; Provisional
Probab=99.61  E-value=3.6e-15  Score=100.16  Aligned_cols=151  Identities=13%  Similarity=0.114  Sum_probs=112.7

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf             99999819998899999999999999999999999986508289999999999999998510011011100223210011
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGG  105 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~  105 (398)
                      |.+.+..|.++.+.+ +....|-++..++..+.|+++||++||.++............+..+.++.+.+.+.-++.|++.
T Consensus       230 p~l~~~~g~s~~~~~-~~l~~~Gia~~~g~~~~grl~dr~~~~~~~~~~~ll~~~~~~l~~~~~~~~~~~~~~~l~g~~~  308 (390)
T PRK03545        230 PFVQNVAGLSANFAT-ALLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI  308 (390)
T ss_pred             HHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999870599888999-9999999999999999999988421019999999999999999998878999999999999999


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             11111000123321000111122122331000111111111122221111110145678888877778887616
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRF  179 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~  179 (398)
                      ....+..++.+.+..| ++|+.++++++..+++|..+||.+|+.+.+ +.||++.+++.+.+.++..++..+..
T Consensus       309 ~~~~~~~q~~~~~~ap-~~~~~a~al~~s~~~lG~~lG~~lgG~~~~-~~G~~~~~~~ga~~~~~al~~~~~~~  380 (390)
T PRK03545        309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL-HLGLSSIGYVGAVLALAALVWAIFIF  380 (390)
T ss_pred             HHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9878999999998788-967899999999999999999999999998-22746899999999999999999999


No 115
>PTZ00207 hypothetical protein; Provisional
Probab=99.60  E-value=4.9e-13  Score=88.37  Aligned_cols=114  Identities=10%  Similarity=0.186  Sum_probs=86.8

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC------CCHHHHCCCCC
Q ss_conf             999998199988999999999999999999999999865082899999999999999985100------11011100223
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI------NSFTGMLCMRL   99 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a------~~~~~l~~~r~   99 (398)
                      |.+++.++.|..|..... +. -...+...++.|.+-|++|+|+++++|.....+|.++.+++      .|.+.+.+...
T Consensus        51 ~~l~~~y~~sq~dlstIs-Tv-G~v~gyf~lP~g~lyD~~GP~~~~~i~~~~~~lG~ll~~L~F~g~I~gsv~~~~vf~a  128 (591)
T PTZ00207         51 GAMQARYNLTQRDLSTIT-TV-GIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNG  128 (591)
T ss_pred             HHHHHHHCCCHHHHHHHE-EH-HHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCEECCCHHHHHHHHH
T ss_conf             899988378876511302-04-3431256425697750248607899999999999999880047710785134579999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
Q ss_conf             2100111111100012332100011112212233100011111
Q gi|254780967|r  100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPIL  142 (398)
Q Consensus       100 l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~i  142 (398)
                      +...|.+.....+....-+.|| ++|+...++.-...++|..+
T Consensus       129 i~~~g~s~fDta~lvT~l~~FP-~~RG~VV~ilKtf~GLGsAI  170 (591)
T PTZ00207        129 LMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAI  170 (591)
T ss_pred             HHHHCCHHHHHHHHHHHHHHCC-CCCCCEEEEEHHHCCCCHHH
T ss_conf             9973618877889999998575-45685687531212551999


No 116
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.60  E-value=7.3e-15  Score=98.45  Aligned_cols=156  Identities=14%  Similarity=0.098  Sum_probs=120.3

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf             9999999981999889999999999999999999999998-650828999999999999999851001101110022321
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS-DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQ  101 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~-Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~  101 (398)
                      ..+|...+|.+.++++.+ +..+.......+.|.+..... +|++.|+.+..|..+++++....++++|++.+++.-.+.
T Consensus       229 ~~lpl~~~~~~~~~~~~g-~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~~~~~~~~~~~i~~~lf  307 (400)
T PRK11646        229 LMLPIMVNDIAGSPSAVK-WMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLF  307 (400)
T ss_pred             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999998558789999-9999999999999999999999854729999999999999999999998899999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             00111111100012332100011112212233100011111111112222111----11101456788888777788876
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS----GGWIGIFVCMGVITTFITLWYYI  177 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~----~gWr~~f~~~~~~~~~~~~~~~~  177 (398)
                      .+|+....|..++++++..|+++|++.+|..+..+++|..+||.+|+.+.+..    .+| .++.+.++++++..+...+
T Consensus       308 tiGe~l~~P~~~s~va~lap~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~~~~~~~p~-~~W~~~~~~~~l~~~~l~~  386 (400)
T PRK11646        308 YIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALHQPE-LPWMMLGIIGIITLLALGW  386 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf             999999975489999983896543237629999999999988989999995530248985-7999999999999999999


Q ss_pred             HCC
Q ss_conf             167
Q gi|254780967|r  178 RFP  180 (398)
Q Consensus       178 ~~p  180 (398)
                      .++
T Consensus       387 ~~~  389 (400)
T PRK11646        387 QFS  389 (400)
T ss_pred             HHH
T ss_conf             998


No 117
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740   This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=99.54  E-value=1.9e-12  Score=85.14  Aligned_cols=384  Identities=14%  Similarity=0.215  Sum_probs=208.8

Q ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHH
Q ss_conf             99999999988-65766999999999981999889999999999999999999999998650-82899999999999999
Q gi|254780967|r    5 IVIAMLMAINS-LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIIST   82 (398)
Q Consensus         5 ~~l~~~~~~~~-~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~   82 (398)
                      .=|..++++.. +--+-..|.--.+.+.+|.+.+++| ++.|.--++..+.+.+.|..+||+ .-||++.++....++-.
T Consensus         5 ~~L~~msFl~~fiWGsWlvtLg~y~~~tl~F~ga~iG-~vYss~gIAAi~~P~l~GiiaDkwlsA~~vya~~~~~gA~~l   83 (435)
T TIGR00889         5 LKLKVMSFLQYFIWGSWLVTLGSYLSKTLKFSGAEIG-AVYSSTGIAAILMPILLGIIADKWLSAQKVYAVCHLVGALLL   83 (435)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             4567999999998766898778998661344554203-778877899997278999884156519999999999999999


Q ss_pred             HHHHCCCCHHHHCCCCCCCCCC----CCCCCCCCHHHHH----HHHCCCCCCCCCCC---CCCEECCCCCCCCCCCCCCC
Q ss_conf             9851001101110022321001----1111110001233----21000111122122---33100011111111112222
Q gi|254780967|r   83 FIMVTINSFTGMLCMRLIQGIG----GAAPRIITISIIR----DIYDGRDMAKVLSI---AMMIFMIMPILAPSIGQATV  151 (398)
Q Consensus        83 ~~~~~a~~~~~l~~~r~l~G~g----~~~~~~~~~a~i~----~~~~~~~~~~~~~~---~~~~~~~g~~igp~ig~~l~  151 (398)
                      ...+-.++++.+...-.+..+.    .+.....+.+-+.    |....=-|=|.+|.   +.+.+.++  +-|-+-|. .
T Consensus        84 f~AAq~Ttp~~~F~v~L~ns~ayMPTiaL~Nsisy~~l~~AGlD~~~dFPpIRv~GTiGfI~am~avs--llPqiLGY-a  160 (435)
T TIGR00889        84 FFAAQVTTPAGMFLVLLVNSLAYMPTIALTNSISYANLPNAGLDVVTDFPPIRVMGTIGFIVAMWAVS--LLPQILGY-A  160 (435)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHH--HHHHHHHC-C
T ss_conf             88515688867899999999775147888999999855424885413788706850278999999997--52566301-4


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-
Q ss_conf             1111110145678888877778887616788640221011111123-33100000000025677788763100146888-
Q gi|254780967|r  152 ALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAIL-HSFSLIFKHRASTLYNIANSLTMGAILGFVNS-  229 (398)
Q Consensus       152 ~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (398)
                      +...+ +...++.+..+.+..+.. +.+|+++-+|++.+.+.+..+ -+-..++|||+...+.++ .+..+....+.+. 
T Consensus       161 ~~els-~~qLyI~ag~SalL~~fa-l~LP~iPVak~~a~~s~~~~LGLDAf~Lfknkr~~iFF~f-s~llga~L~i~n~F  237 (435)
T TIGR00889       161 DLELS-NLQLYITAGSSALLGVFA-LTLPDIPVAKKKAKMSLKVLLGLDAFILFKNKRMAIFFLF-SMLLGAELQITNIF  237 (435)
T ss_pred             CCCCC-CHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHC
T ss_conf             77713-037899999999999999-8478989851003411788876789887508854678999-99975688876530


Q ss_pred             HHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCC
Q ss_conf             765455431531--------101588998865767788999998500156512468877888999999998732-57776
Q gi|254780967|r  230 SQQIYVGIYQLG--------NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQIT-SNHPI  300 (398)
Q Consensus       230 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  300 (398)
                      ...++.+....+        +..+.+.++..+..+..-+-.+...+|+|.|++...++....+-.+   +.... .+...
T Consensus       238 gN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfg---fF~YGsdp~~f  314 (435)
T TIGR00889       238 GNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFG---FFAYGSDPEYF  314 (435)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HEEECCCCCHH
T ss_conf             452101125788620112321328877488999999998522553134478999999999999876---50307898548


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----H-------HHH
Q ss_conf             40379989989999999999999999-9853466769999999999999999999999999-83-----1-------179
Q gi|254780967|r  301 HLLIFIAFFFLASFQFGLINSNFSSI-SMEPFSHLAGTASSIFGFINTVISTILGIIIGQS-FN-----G-------TTY  366 (398)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~-~~-----~-------~~~  366 (398)
                      ....+.....+.|..+-+-+-..... ..|..++.|.+|.|+.....+..|++.|..++.. .|     +       ..|
T Consensus       315 g~~LL~Ls~ivyG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~gePvnGL~~dW  394 (435)
T TIGR00889       315 GYVLLLLSMIVYGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEPVNGLVFDW  394 (435)
T ss_pred             HHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC
T ss_conf             99999999999865441034457899600278666678889999997017777754456366643312787445414055


Q ss_pred             HHHHH-HHHH-HHHHHHHHHHHHCCHH---HHHHHCC
Q ss_conf             99999-9999-9999999999942200---0343069
Q gi|254780967|r  367 PITIG-FFGI-AVSSFICILIVEKNQM---FRKTELR  398 (398)
Q Consensus       367 ~~~~~-~~~~-~~~~~~~~~~~~~~~~---~r~~~~r  398 (398)
                      .-.|. +.+. .+++++.+..-+.++.   +.|.+.|
T Consensus       395 ~t~Wl~fAgy~~~lAv~Fm~~Fky~~~eit~~k~~~r  431 (435)
T TIGR00889       395 QTVWLVFAGYIVILAVLFMIFFKYSHNEITAIKVDDR  431 (435)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             1367899999999999998763025664000235764


No 118
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54  E-value=5.2e-14  Score=93.75  Aligned_cols=152  Identities=20%  Similarity=0.355  Sum_probs=101.1

Q ss_pred             HHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
Q ss_conf             99999-999819998899999999999999999999999986508289-9999999999999985100110111002232
Q gi|254780967|r   23 PCLPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKI-VMMFGLVIHIISTFIMVTINSFTGMLCMRLI  100 (398)
Q Consensus        23 p~lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l  100 (398)
                      ...|. ..++.+.++.+.+ ...+.+.....+++++.|+..||+|||+ .+..+.....++.+.....++.+.....-.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (352)
T cd06174         196 TYLPLYLQEVLGLSAAEAG-LLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL  274 (352)
T ss_pred             HHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999982489877777-888999999999999999999982738999999999999999999988659999999999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             1001111111000123321000111122122331000111111111122221111110145678888877778887
Q gi|254780967|r  101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYY  176 (398)
Q Consensus       101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~  176 (398)
                      .|++.+...+...+++.|..|+++|++.++..+....++..++|.+.+.+.+ ..+|++.|++.+++..+..+...
T Consensus       275 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~i~g~i~~-~~g~~~~~~i~~~~~~i~~i~~~  349 (352)
T cd06174         275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-TGGYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999998796079999999999999999999999999999-87899999999999999999999


No 119
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.54  E-value=6.6e-14  Score=93.18  Aligned_cols=40  Identities=15%  Similarity=0.438  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHH
Q ss_conf             99999999999999999865082899999-99999999998
Q gi|254780967|r   45 SFYLIGYGIAQIFYGPLSDRFGRKIVMMF-GLVIHIISTFI   84 (398)
Q Consensus        45 s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~-g~~~~~i~~~~   84 (398)
                      +..-+|.+++.++.+.+..++|-|..+++ |.....++.+.
T Consensus       154 ~~~~vG~~l~~~l~~~i~~~~gWr~~F~~~g~~~~v~~~~~  194 (434)
T PRK11663        154 TAHNVGGALIPLVVGAIALHYGWRYGMIIAGIIAIVVGLFL  194 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99877788889999999998062999999999999999999


No 120
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter); InterPro: IPR005279   The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analysis of a number of recently discovered peptide transport proteins .   This family consists of bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. .
Probab=99.53  E-value=9.9e-12  Score=81.17  Aligned_cols=151  Identities=14%  Similarity=0.167  Sum_probs=119.3

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCC-CHHHHCCCCCCCCCCCCCC
Q ss_conf             81999889999999999999999999999998650-828999999999999999851001-1011100223210011111
Q gi|254780967|r   31 SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFIMVTIN-SFTGMLCMRLIQGIGGAAP  108 (398)
Q Consensus        31 ~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~~~~a~-~~~~l~~~r~l~G~g~~~~  108 (398)
                      -+|++.++.. .+.++|.--.=....+.++..||. |.||++.++..+..+|.+..+.++ |...++.+-.+..+|.|..
T Consensus        49 GLG~~~~~a~-~i~gays~lVYll~~~G~wfgDrVwG~~kT~~l~giV~~lGh~~la~~~~n~~~~~~gLg~iA~Gsgl~  127 (501)
T TIGR00924        49 GLGLDKELAT-AIFGAYSALVYLLTIVGAWFGDRVWGAKKTLVLAGIVVMLGHLVLALSIYNSDLLFIGLGLIAVGSGLL  127 (501)
T ss_pred             CCCCCCCCCH-HHHHHHHHHHHHHHHCCCHHHCEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHH
T ss_conf             6665645102-122578999999985141320111253043345659999889997216665468999999998723524


Q ss_pred             CCCCHHHHHHHHCCCC-CCC---CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             1100012332100011-112---212233100011111111112222111111014567888887777888761678864
Q gi|254780967|r  109 RIITISIIRDIYDGRD-MAK---VLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPETLD  184 (398)
Q Consensus       109 ~~~~~a~i~~~~~~~~-~~~---~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~  184 (398)
                      -....+++.+.|+++| |.|   ++++..++.++|..++|.+.+ .+.++.||+..|-.++ .+....++-+..-++..+
T Consensus       128 Kan~ssmvg~lYe~~d~rPrrDggFt~FYm~INiG~f~~pll~g-~i~en~g~h~gf~laa-VGm~~gll~f~~gr~~l~  205 (501)
T TIGR00924       128 KANASSMVGKLYERDDDRPRRDGGFTVFYMSINIGSFISPLLIG-VIAENVGYHLGFALAA-VGMALGLLRFLLGRKNLR  205 (501)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHH-HHHHHHHHHHHHHCCCCC
T ss_conf             42289999985169899844022113678899899999888753-6765224267888999-999999999973024688


No 121
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.53  E-value=6.5e-14  Score=93.23  Aligned_cols=150  Identities=11%  Similarity=0.047  Sum_probs=89.8

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC-CCCHHHHCCCCCCCCCC
Q ss_conf             99999819998899999999999999999999999986508289999999999999998510-01101110022321001
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT-INSFTGMLCMRLIQGIG  104 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~-a~~~~~l~~~r~l~G~g  104 (398)
                      |.+.+..|.|+++++ +....|-++..++.++.|+++||+|+|++...+.....++.+...+ .++.+..++.-++.|.+
T Consensus       224 p~L~~~~g~s~~~i~-~~l~~~Gig~i~G~~l~Grl~Dr~g~~~~~~~~~~~~~~~ll~l~~~~~~~~~~~v~~~l~~~~  302 (389)
T PRK10091        224 PYMMFISGFSETSMT-FIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTTSLIFAFICCAG  302 (389)
T ss_pred             HHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999984299977999-9999999999999999999976227415999999999999999999887699999999999999


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             1111110001233210001111221223310001111111111222211111101456788888777788876
Q gi|254780967|r  105 GAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYI  177 (398)
Q Consensus       105 ~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~  177 (398)
                      .....+..+..+.|..| +.+..+.+..+..+++|..+|+.+||..++...+|+++-+..+++.++.......
T Consensus       303 ~~~~~~~~q~~~~~~a~-~~~~~a~al~~sa~nlGialGs~~GG~~l~~g~g~~~~~~~ga~l~~~al~~~l~  374 (389)
T PRK10091        303 LFALSAPLQILLLQNAK-GGELLGAAGGQIAFNLGSAIGAYCGGLMLTLGLAYNYVALPAALLSFAAMSSLLL  374 (389)
T ss_pred             HHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99977999999998788-9766899999999999999999999999976999403899999999999999999


No 122
>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=99.51  E-value=1.2e-13  Score=91.70  Aligned_cols=16  Identities=31%  Similarity=0.289  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHHC
Q ss_conf             9999999999998510
Q gi|254780967|r   72 MFGLVIHIISTFIMVT   87 (398)
Q Consensus        72 ~~g~~~~~i~~~~~~~   87 (398)
                      ++|.+.+++++...+.
T Consensus       145 lwGSiGfai~a~~~G~  160 (413)
T pfam01306       145 MFGCVGWALCASIAGI  160 (413)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             8999999999998678


No 123
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46  E-value=6.5e-13  Score=87.69  Aligned_cols=16  Identities=25%  Similarity=0.385  Sum_probs=7.3

Q ss_pred             HHHHHHHHHHHHHHHC
Q ss_conf             9999999999998510
Q gi|254780967|r   72 MFGLVIHIISTFIMVT   87 (398)
Q Consensus        72 ~~g~~~~~i~~~~~~~   87 (398)
                      ++|.+.+++++...++
T Consensus       146 lwGSiGfavas~~~G~  161 (418)
T PRK09528        146 MFGSLGWALCAFFAGI  161 (418)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999889


No 124
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family; InterPro: IPR014090   RhtX from Sinorhizobium meliloti 1021 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes..
Probab=99.46  E-value=4.7e-11  Score=77.43  Aligned_cols=370  Identities=15%  Similarity=0.100  Sum_probs=190.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHH
Q ss_conf             89999999999886576699999999998199988999999999999999999999999865------082899999999
Q gi|254780967|r    3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR------FGRKIVMMFGLV   76 (398)
Q Consensus         3 ~i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr------~Grr~~l~~g~~   76 (398)
                      +++.++.+-.--.+-+.+...++|.+.++=|.+....+  ..+.-.+.. +-.+.+.|+.||      .||||--+.=.=
T Consensus         2 L~~~l~~LYL~QGIP~~l~~~AlP~LlR~~GA~~~Ala--~l~L~~LP~-V~KF~~AP~VD~~~~~~GlG~RR~W~~P~Q   78 (391)
T TIGR02718         2 LVITLGLLYLSQGIPIGLALDALPTLLREDGAPLTALA--LLPLVGLPL-VVKFLWAPLVDNRWSARGLGRRRSWVLPMQ   78 (391)
T ss_pred             EEEEEHHHHHHCCHHHHHHHHHHCHHHHCCCCHHHHHH--HHHHHHHHH-HHHHHHCCHHHCCCCCCCCCCCCCHHHHHH
T ss_conf             02200477774002799999830245300687157999--877875589-999986231302367887886530121489


Q ss_pred             H---HHHHHHH---HHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf             9---9999998---510011011100223210011111110001233210001111221223310001111111111222
Q gi|254780967|r   77 I---HIISTFI---MVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQAT  150 (398)
Q Consensus        77 ~---~~i~~~~---~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l  150 (398)
                      +   .++.++.   ...++..|..= .-.+.-+..+.-......+..|.+.++..++.++....+..+|...|... ...
T Consensus        79 ~~V~~~l~slA~~~~~~A~~~~AvG-LL~~~~L~Sa~QDIA~DG~A~~H~~G~~LA~~NAvQ~a~v~~G~~~GG~~-~L~  156 (391)
T TIGR02718        79 LLVVACLASLALVGLDVAGAGWAVG-LLAVASLASATQDIATDGMAAEHLNGRTLAKVNAVQIAGVMIGFFGGGAG-TLV  156 (391)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH-HHH
T ss_conf             9999998888740222016889999-99999997546545335414352057446788888885578644200589-999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-
Q ss_conf             2111111014567888887777888761678864022101111112333100000000025677788763100146888-
Q gi|254780967|r  151 VALSGGWIGIFVCMGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNS-  229 (398)
Q Consensus       151 ~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (398)
                      +....|||..|...+.+.+..+...... ++.   +..+++.......+....+|+|.-+.. +...+.+...-..... 
T Consensus       157 L~~~~G~R~~~L~~Ac~~L~~L~~~l~l-~~r---~~~~~~ap~~~~ASL~~F~rRP~a~~l-LAlAL~~~~~~~~~~Gl  231 (391)
T TIGR02718       157 LIGKFGQRPAFLLLACVPLASLVCVLWL-KDR---AVASPEAPLARRASLLRFLRRPLALSL-LALALLSAMTAVSGFGL  231 (391)
T ss_pred             HHHHHCHHHHHHHHHHHHHHHHHHHHHH-CCC---CCCCCCCCHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHCCC
T ss_conf             9864151599999999879999999870-577---767788742465568887525645899-99999998775541141


Q ss_pred             HHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHH
Q ss_conf             7654554315311015889-98865767788999998500156512468877888999999998732577-764037998
Q gi|254780967|r  230 SQQIYVGIYQLGNLFPIAF-AVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNH-PIHLLIFIA  307 (398)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  307 (398)
                      ...++.|..-..+..+..- +........|+....++++|.|-.+.......+..  +.+++........ .........
T Consensus       232 ~~~yL~Da~~~~~~IG~l~~a~~~~~~~LG~~~~A~lvR~~GL~~~~~l~~~l~G--~~alL~f~~~~~wl~~~~~~a~~  309 (391)
T TIGR02718       232 SKLYLVDAGWPLEAIGRLGMAGGLVTVLLGCGGGALLVRRLGLWRTLILGVGLAG--SLALLWFAQAAFWLAPGIAVAWS  309 (391)
T ss_pred             HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             0223400243277631021158999999976799999999989999999989888--99999999836651036799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99899999999999999999853--4667699999999999999999999999998311799999999999999999999
Q gi|254780967|r  308 FFFLASFQFGLINSNFSSISMEP--FSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILI  385 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (398)
                      ...+.....++......+..+..  .+++.||-.......+-.+--+...+...+.+...|  .-.|....+.+.+...+
T Consensus       310 ~~~~~~L~~~~~~VaI~~~~M~~a~dGdQaGTD~T~~~~~~~~~~lia~S~~~~~~~~~GY--a~~F~~~~vlavLa~~l  387 (391)
T TIGR02718       310 CSVLGSLITGITSVAILTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSILVYLTDRVGY--AGGFLSGTVLAVLAILL  387 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_conf             9999999989999999999986215888985127788868999999999999999975222--56788999999999999


Q ss_pred             H
Q ss_conf             9
Q gi|254780967|r  386 V  386 (398)
Q Consensus       386 ~  386 (398)
                      .
T Consensus       388 a  388 (391)
T TIGR02718       388 A  388 (391)
T ss_pred             H
T ss_conf             8


No 125
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.46  E-value=5.5e-13  Score=88.10  Aligned_cols=47  Identities=17%  Similarity=-0.020  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998534667699999999999999999999999998311
Q gi|254780967|r  318 LINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT  364 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~  364 (398)
                      +......+...+...+..|.+.++-..+...+..+.|.+-....+.+
T Consensus       314 l~l~~~rt~~~~~a~~LSg~~Q~vGYllAalgP~~~G~l~d~tg~w~  360 (393)
T PRK09705        314 LLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYL  360 (393)
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             99998736998899999999999989999999999999999829958


No 126
>PRK10504 multidrug efflux system protein MdtE; Provisional
Probab=99.43  E-value=1.2e-12  Score=86.21  Aligned_cols=35  Identities=17%  Similarity=0.205  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             99999999999999986508289999999999999
Q gi|254780967|r   47 YLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus        47 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      ..++..+|.++.|.+.|.+|-|.++.+..-+..++
T Consensus       143 ~~~g~~lGP~lGG~l~~~~~WrwiF~invPi~ii~  177 (471)
T PRK10504        143 GQIGPLLGPALGGLLVEYASWHWIFLINIPVGIIG  177 (471)
T ss_pred             HHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             99998853121001011010235987606999999


No 127
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43  E-value=1.3e-12  Score=85.97  Aligned_cols=12  Identities=17%  Similarity=0.509  Sum_probs=4.3

Q ss_pred             HHHCCHHHHHHH
Q ss_conf             994220003430
Q gi|254780967|r  385 IVEKNQMFRKTE  396 (398)
Q Consensus       385 ~~~~~~~~r~~~  396 (398)
                      +..+++.+|+.|
T Consensus       445 ~~~~~k~~~~~~  456 (463)
T PRK09556        445 VMEEKKIRREKK  456 (463)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999988


No 128
>pfam07690 MFS_1 Major Facilitator Superfamily.
Probab=99.43  E-value=8.3e-13  Score=87.12  Aligned_cols=32  Identities=25%  Similarity=0.436  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             15889988657677889999985001565124
Q gi|254780967|r  244 FPIAFAVGGFAMSIASFINSRLVEKFGIRRVS  275 (398)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~  275 (398)
                      .++..+...++..+++++.|++.||+++|+..
T Consensus        34 ig~~~s~~~~~~~i~~~~~G~l~Dr~g~k~~~   65 (345)
T pfam07690        34 IGLLLTAFSLGYALAQPLAGRLSDRFGRRRVL   65 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             99999999999999999999999990969999


No 129
>TIGR00805 oat sodium-independent organic anion transporter; InterPro: IPR004156   This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced . Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=99.42  E-value=8.1e-13  Score=87.18  Aligned_cols=254  Identities=19%  Similarity=0.275  Sum_probs=183.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC------
Q ss_conf             65766999999999981999889999999999999999999999998650828999999999999999851001------
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN------   89 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~------   89 (398)
                      +....+...+.+|.++|++|.++.| .+.+.|-+++.+.-++......|..|-+++.+|.+..++|+++..+.+      
T Consensus        47 l~~~l~~~~l~~IE~~F~~~~s~~G-~I~~~~e~gn~~l~I~vsyFg~~~~~p~~ig~G~~~~~~G~l~~slPhf~~~~Y  125 (723)
T TIGR00805        47 LVNGLVNSSLTTIERRFKLSTSSSG-LINGSYEIGNLLLIIFVSYFGTKLHRPKVIGIGCVIMGLGSLLLSLPHFLSGRY  125 (723)
T ss_pred             HHHHHHCCCCCCCCCEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             7612001120333431058767776-301000230112321055630311468999986899988799999778747872


Q ss_pred             --------------------------------------------C--HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             --------------------------------------------1--011100223210011111110001233210001
Q gi|254780967|r   90 --------------------------------------------S--FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR  123 (398)
Q Consensus        90 --------------------------------------------~--~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~  123 (398)
                                                                  |  +..++++.++.|+|.....|.+.+++-|..+++
T Consensus       126 ~~~~~~~~~~~~S~~~~~~c~~~~~~~L~~~~~~S~~~~~~~~~S~~~~~~~~~~~l~GIG~tP~~~lGisy~ddf~~~~  205 (723)
T TIGR00805       126 EYSTTVSSTGNLSSANSFLCMENSTQALRPTQDPSECQKEHKETSLMWLLVLVAQLLRGIGETPIFPLGISYIDDFAKSK  205 (723)
T ss_pred             CCCCEEECCCCCCCCCHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             23521202100024304553257623420103442331122222478999999999741488765456764111256644


Q ss_pred             CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC--------------------CCHHHHH----HHHHHHHHHHHHHHHC
Q ss_conf             111221223310001111111111222211111--------------------1014567----8888877778887616
Q gi|254780967|r  124 DMAKVLSIAMMIFMIMPILAPSIGQATVALSGG--------------------WIGIFVC----MGVITTFITLWYYIRF  179 (398)
Q Consensus       124 ~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g--------------------Wr~~f~~----~~~~~~~~~~~~~~~~  179 (398)
                      +.+..+|++...-.+||++|-++|+.....+.+                    |-..+|+    .+.+.++..+. ++++
T Consensus       206 ~sply~gi~~~~~v~GP~~G~llgS~~~~~y~D~~~~nt~qil~~~~~p~DprWiGAWW~GFl~~~~v~~~~s~P-lfff  284 (723)
T TIGR00805       206 NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEQILDVILTPTDPRWIGAWWLGFLICSGVALLTSLP-LFFF  284 (723)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH-HHHC
T ss_conf             423799999999998899999998776753102688886671241378998534317899999999999999855-7636


Q ss_pred             CCCCCHHHHCC---------CCC---------------------------------------------------------
Q ss_conf             78864022101---------111---------------------------------------------------------
Q gi|254780967|r  180 PETLDPRDVRP---------LNL---------------------------------------------------------  193 (398)
Q Consensus       180 pet~~~~~~~~---------~~~---------------------------------------------------------  193 (398)
                      |++.+++..++         .+.                                                         
T Consensus       285 Pk~l~~~~~~~~~~~~~~~~~~~~rtPeccG~PGsnktaalnsdaP~adnfGsnkaikkfdyttfk~lnkifeiteqasl  364 (723)
T TIGR00805       285 PKALPKEGKRKNVDVHEAEKLEKSRTPECCGMPGSNKTAALNSDAPMADNFGSNKAIKKFDYTTFKMLNKIFEITEQASL  364 (723)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             55253235677877788888752058643468875420100146630221131235666436899999999987655566


Q ss_pred             ---------------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC-HHHHHHHH
Q ss_conf             ---------------------11233310000000002567778876310014688876545543153110-15889988
Q gi|254780967|r  194 ---------------------YAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGNL-FPIAFAVG  251 (398)
Q Consensus       194 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  251 (398)
                                           ++..+..+.++.|+.++...+....-...+..+.++.|-++.++|+.++. ...+.+..
T Consensus       365 lyssiParG~~~~r~~~~~~~k~F~~~~~~l~~n~~~m~~~l~~~~~~~~~~g~~~FlpKyLE~qyG~~~~~a~~l~G~v  444 (723)
T TIGR00805       365 LYSSIPARGEDKSRKKLSDITKDFPKIIKRLLCNKIYMLVILAQVIDVLAFNGYITFLPKYLEKQYGISSAEANLLIGVV  444 (723)
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHH
T ss_conf             65203545663026889988989999999973250666777899999999864775201688874488721202111024


Q ss_pred             HH-HHHHHHHHHHHHHHCCCC
Q ss_conf             65-767788999998500156
Q gi|254780967|r  252 GF-AMSIASFINSRLVEKFGI  271 (398)
Q Consensus       252 ~~-~~~~~~~~~~~l~~r~~~  271 (398)
                      .+ ...+|..+.|.+.+|+..
T Consensus       445 ~lP~~~~G~~~gG~i~K~F~~  465 (723)
T TIGR00805       445 NLPAAGLGYLIGGIIMKKFKL  465 (723)
T ss_pred             HHHHHHHHHHHHHHHHHHHEE
T ss_conf             557999999987052221011


No 130
>PRK03699 hypothetical protein; Provisional
Probab=99.42  E-value=9e-13  Score=86.91  Aligned_cols=68  Identities=10%  Similarity=0.034  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             85346676999999999999999999999999983117999999999999999999999422000343
Q gi|254780967|r  328 MEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKT  395 (398)
Q Consensus       328 ~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  395 (398)
                      .+..++..+.....-+........+.|.+.....-+........+............+..|+|.....
T Consensus       324 ~~~~~~~vs~il~~g~~G~~~~P~i~G~i~~~~G~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~  391 (394)
T PRK03699        324 KVASPKLVNFILTCGTIGTMLSFVVTGPIVAHFGLQAAMLTANGLYAVVFVMCIALGFVSKHRQHNTL  391 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             55318799999999989999999999999998628999999999999999999999999988861461


No 131
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41  E-value=1.5e-12  Score=85.66  Aligned_cols=21  Identities=29%  Similarity=0.523  Sum_probs=8.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCHH
Q ss_conf             999999999999986508289
Q gi|254780967|r   49 IGYGIAQIFYGPLSDRFGRKI   69 (398)
Q Consensus        49 ~~~~i~~~~~G~l~Dr~Grr~   69 (398)
                      +|++++.+..|.+.|++|.+.
T Consensus       139 iGf~~~~l~~G~l~~~~g~~~  159 (383)
T PRK11128        139 IAFVIGSALTGKLVSWFGEQA  159 (383)
T ss_pred             HHHHHHHHHHHHHHHHCCCCH
T ss_conf             999999999999998727017


No 132
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.41  E-value=1.4e-12  Score=85.85  Aligned_cols=60  Identities=8%  Similarity=-0.102  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             999999999999999999999999831179999999999999999999994220003430
Q gi|254780967|r  337 TASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE  396 (398)
Q Consensus       337 ~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  396 (398)
                      .-+++.+..+...+...|.+...+.-..-+-....+...++.....+.-..+++..+++|
T Consensus       343 l~~sl~~l~~~~~~~~sG~la~~~Gy~~fFi~~~~~~ip~l~ll~~~~~~~~~~~~~~~~  402 (402)
T PRK11902        343 LLSALASVGRVYVGPTSGYLVEALGWPGFYLGTVLIALPGLALLWLMRNTIDRYEAQAAE  402 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999998999884399999981969999999999999999999988898876654149


No 133
>pfam03825 Nuc_H_symport Nucleoside H+ symporter.
Probab=99.41  E-value=2.7e-12  Score=84.33  Aligned_cols=20  Identities=25%  Similarity=0.391  Sum_probs=8.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCC
Q ss_conf             65767788999998500156
Q gi|254780967|r  252 GFAMSIASFINSRLVEKFGI  271 (398)
Q Consensus       252 ~~~~~~~~~~~~~l~~r~~~  271 (398)
                      +++..+++.++|++.|++..
T Consensus       348 G~g~~iG~~~~G~l~~~f~~  367 (400)
T pfam03825       348 GVGNVLGSILSGMLVGMFTT  367 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHC
T ss_conf             08999999999999999706


No 134
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.41  E-value=1.1e-10  Score=75.32  Aligned_cols=46  Identities=22%  Similarity=0.154  Sum_probs=22.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             9999999999831179999999999999999999994220003430
Q gi|254780967|r  351 TILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRKTE  396 (398)
Q Consensus       351 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  396 (398)
                      .+.+.++.....+..+-.......++.+.+..+..-.++|..+-.|
T Consensus       402 ~~~G~l~d~~Gw~~~F~~l~~~~~~a~i~l~~~~~~e~r~~~~~~~  447 (452)
T PRK11273        402 AIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQ  447 (452)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999967754778999999999999999999999777651588862


No 135
>KOG2504 consensus
Probab=99.37  E-value=6.5e-13  Score=87.68  Aligned_cols=164  Identities=18%  Similarity=0.321  Sum_probs=133.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9988657669999999999819998899999999999999999999999986508--28999999999999999851001
Q gi|254780967|r   12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFG--RKIVMMFGLVIHIISTFIMVTIN   89 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~G--rr~~l~~g~~~~~i~~~~~~~a~   89 (398)
                      .+..++.....-.+|...++.+.++.+.. ...+..-+.-.++.+..|.++|+..  ++.+...+++..+++.+.+.+++
T Consensus       308 ~~~~~g~~~p~~~l~~~~~~~g~~~~~~a-~l~sii~~~~i~gRi~~G~laD~~~~~~~~~~~~~l~~~gl~~~~~p~~~  386 (509)
T KOG2504         308 LFAYLGFNVPFVYLPSYAKSLGLSSNDAA-FLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT  386 (509)
T ss_pred             HHHHHHHHHHHEEEHHHHHHCCCCHHHHH-HHHHHHHHHCCCHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999876334440877855598478899-99999987512064012655167630157989999999999999886135


Q ss_pred             CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             10111002232100111111100012332100011112212233100011111111112222111111014567888887
Q gi|254780967|r   90 SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT  169 (398)
Q Consensus        90 ~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~  169 (398)
                      +++.++..-.+.|+..|........++.|..+.++.+.+.++.....+++..+||++.+.+.+.+.+|...|+..+...+
T Consensus       387 ~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~  466 (509)
T KOG2504         387 TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFL  466 (509)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHH
T ss_conf             78999999999985244788756689998639875036999999998999870021341322004773018987053999


Q ss_pred             HHHHHHH
Q ss_conf             7778887
Q gi|254780967|r  170 FITLWYY  176 (398)
Q Consensus       170 ~~~~~~~  176 (398)
                      +.....+
T Consensus       467 ~s~~~~~  473 (509)
T KOG2504         467 LSAVLLL  473 (509)
T ss_pred             HHHHHHH
T ss_conf             9999999


No 136
>TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736   Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated .   The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified .   Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9  prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.   This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.35  E-value=4e-12  Score=83.34  Aligned_cols=135  Identities=23%  Similarity=0.229  Sum_probs=89.3

Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHHHCC--C--CHHHHCCCCCCCCCCC
Q ss_conf             199988999999999999999999999999865082899999999999999--985100--1--1011100223210011
Q gi|254780967|r   32 LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST--FIMVTI--N--SFTGMLCMRLIQGIGG  105 (398)
Q Consensus        32 l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~--~~~~~a--~--~~~~l~~~r~l~G~g~  105 (398)
                      +|.|.++.. .....-.+...+.+|+.|.||||+|||++++.......+..  .+..+.  +  +++.+...-....+-.
T Consensus       266 Lg~~~~~~~-~~~~~~~i~~~~~~P~~G~LsDriGRR~~~i~~~~~~~~~~~p~l~~l~~~~y~~~~~~~~~~~~~~~i~  344 (413)
T TIGR00883       266 LGLSANSAL-LVLMLSLILFFVVIPLSGALSDRIGRRRVLIIFTVLAALLAVPLLMALLDSGYSPFTLVFFLLLGLALIG  344 (413)
T ss_pred             CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             268766899-9999999999999999999975536539999999999999999999874178768999999999999999


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCC-CCCEECCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHH
Q ss_conf             11111000123321000111122122-3310001111111111222211111-10145678888
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSI-AMMIFMIMPILAPSIGQATVALSGG-WIGIFVCMGVI  167 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~-~~~~~~~g~~igp~ig~~l~~~~~g-Wr~~f~~~~~~  167 (398)
                      +....+..+...|+||.|-|-+..|+ ++.+..++..++|.++..+.+...+ |..+-+.....
T Consensus       345 ~~~~g~~~~~~~ElFPt~vR~~G~~l~y~~A~~~~GG~aP~iA~~L~~~~~~~~~~~g~yl~~~  408 (413)
T TIGR00883       345 GMYTGPMGSLLPELFPTEVRYTGASLAYNLAGAIGGGLAPYIAAALVAITGDDLYAIGYYLAAL  408 (413)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             9878769998772334407899887999999998656899999999972178874389999999


No 137
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.34  E-value=3.6e-11  Score=78.08  Aligned_cols=155  Identities=24%  Similarity=0.552  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC--H
Q ss_conf             6576699999999998199988--99999999999999999999999986508289999999999999998510011--0
Q gi|254780967|r   16 LGIDIILPCLPKISDSLHLSNE--NYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINS--F   91 (398)
Q Consensus        16 ~~~~~~~p~lp~i~~~l~~s~~--~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~--~   91 (398)
                      ++.....+.+|.+.++++.+..  +.+ +..+.+.++..+++++.|.++||+|||+.+..+.....++.+.+.+.++  .
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (338)
T COG0477          16 LDLGLLSPALPLLLSTLSLSSGRLLYG-LLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL   94 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999874324579999-9999999999999999999998834399999999999999999999987789


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCCCC-EECCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf             1110022321001111111000123321000-111122122331-0001111111111222211-111101456788888
Q gi|254780967|r   92 TGMLCMRLIQGIGGAAPRIITISIIRDIYDG-RDMAKVLSIAMM-IFMIMPILAPSIGQATVAL-SGGWIGIFVCMGVIT  168 (398)
Q Consensus        92 ~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~-~~~~~~~~~~~~-~~~~g~~igp~ig~~l~~~-~~gWr~~f~~~~~~~  168 (398)
                      +.+++.|+.+|++.+...+...+++.|+.|+ ++|+...+.... ....+..++|.+++.+... ..+||..|.......
T Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (338)
T COG0477          95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG  174 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999975611389999999999999999999999999999987633999999999999


Q ss_pred             HHH
Q ss_conf             777
Q gi|254780967|r  169 TFI  171 (398)
Q Consensus       169 ~~~  171 (398)
                      ...
T Consensus       175 ~~~  177 (338)
T COG0477         175 LLL  177 (338)
T ss_pred             HHH
T ss_conf             999


No 138
>pfam01770 Folate_carrier Reduced folate carrier. The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy, such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules.
Probab=99.33  E-value=5.7e-11  Score=77.01  Aligned_cols=310  Identities=13%  Similarity=0.118  Sum_probs=175.5

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf             98199988999999999999999999999999865082899999999999999985100110111002232100111111
Q gi|254780967|r   30 DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPR  109 (398)
Q Consensus        30 ~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~  109 (398)
                      .|-|+|++|+.+-+...-.-.+....++..-+.|-...|++++.+.+...+.-.+.-+.++...+-+..++-|+..+. .
T Consensus        33 ~~kN~T~~qv~neIyPv~TYSyl~~Lv~vfLlTD~lrYKPviil~~l~~i~~~~lLl~~~sl~~mQ~~e~fYG~~~Aa-E  111 (410)
T pfam01770        33 PDKNITQEQVNNEVYPVWTYSYLALLVPVFLLTDYLRYKPVIILQGLAGIVTWLLLLFTTSVIAMQVMEFFYGVATAA-E  111 (410)
T ss_pred             CCCCCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-H
T ss_conf             867989899706000101898999999999999997204999998899999999999826399999999999988887-7


Q ss_pred             CCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH---
Q ss_conf             10001233210001111221223310001111111111222211-11110145678888877778887616788640---
Q gi|254780967|r  110 IITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVAL-SGGWIGIFVCMGVITTFITLWYYIRFPETLDP---  185 (398)
Q Consensus       110 ~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~---  185 (398)
                      ++-.+++-...|+++-.|+.|...++.-+|-.++..+|..+++. ..+.+...++.. .+......+.+++|...+.   
T Consensus       112 vAYysYIYs~Vd~~~YQkvTsy~Raa~L~G~~~s~vlgQllvs~~~~~y~~Ln~ISl-~~~~~a~~~a~fLP~v~~Sl~F  190 (410)
T pfam01770       112 VAYYSYIYSKVDPERYQRVTSYTRAATLVGKFLSGVLGQLLVSLGRVSYFTLNYISL-ASQVVALFLSLFLPRPKRSLFF  190 (410)
T ss_pred             HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCEE
T ss_conf             755402467438554156989999999999999888877831347777788879879-9999999999957999842111


Q ss_pred             -----------HHH-------C---------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             -----------221-------0---------------1111112333100000000025677788763100146888765
Q gi|254780967|r  186 -----------RDV-------R---------------PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQ  232 (398)
Q Consensus       186 -----------~~~-------~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (398)
                                 +.+       +               +...+..++++++..+||..+...+-..+...+.....+....
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ysn~~vl~WSlWwa~at~gy~qV~~YvQ~  270 (410)
T pfam01770       191 HRKSEADDTESESNVMEEGSENGGLTAESGGLEKFSRLSVLRLLWYHLKSCYSNPLLLYWSLWWAFATAGYYQVVNYVQN  270 (410)
T ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             15674335776554334566666544455443422588999999999999847885112239999987389999999999


Q ss_pred             HHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             455431531---10158899886576778899999850015651246887788899999999873257776403799899
Q gi|254780967|r  233 IYVGIYQLG---NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF  309 (398)
Q Consensus       233 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
                      +..+....+   ...|..-+...+...++++..|++-.++.+  .....+.+.....+++++..   .....++......
T Consensus       271 LW~~v~~~~~~~~yNG~VeA~~TllgA~~a~~~G~v~~~w~~--~gel~l~~~S~~~~~ll~~m---~~t~~Iw~~Y~~y  345 (410)
T pfam01770       271 LWKHVEPSDKSSIYNGGVEAASTLLGAVAAFAAGYLKVRWNR--WGELLLAVFSALQAGLLFLM---GFTRNIWVCYVGY  345 (410)
T ss_pred             HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHHHHHHHHHH---HHHCCHHHHHHHH
T ss_conf             999845778742005399999999999999987761576478--89999999999999999999---8635189999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf             899999999999999999853-4667699999999999
Q gi|254780967|r  310 FLASFQFGLINSNFSSISMEP-FSHLAGTASSIFGFIN  346 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~  346 (398)
                      .+.+....+..+.......+. ..+.-|...++.+++.
T Consensus       346 Iif~~~Y~fliTIA~~qiA~~L~~~~yaLVFGiNtfvA  383 (410)
T pfam01770       346 VLFRASYMFLITIATFQIAANLSMERYALVFGINTFVA  383 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHH
T ss_conf             99999999999999999998516463366675588999


No 139
>KOG3098 consensus
Probab=99.32  E-value=1.3e-08  Score=63.99  Aligned_cols=311  Identities=15%  Similarity=0.063  Sum_probs=151.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999999999999999999999865082899999999999999985100110111002232100111111100012332
Q gi|254780967|r   39 YGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRD  118 (398)
Q Consensus        39 ~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~  118 (398)
                      .|....+.-...+.+..++.+.+.|+.|.|..+.+|...+....+..-+ +|-+.++..-.+.|+|.+..+..--.++++
T Consensus        51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~  129 (461)
T KOG3098          51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTS  129 (461)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHEECCCCEEHHH
T ss_conf             5279999999999999981588998860799999986899998877874-051999998898531487655255244311


Q ss_pred             HHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC--CC-----CCCCC-H----------HHHHHHHHHHHHHH--HHHHH
Q ss_conf             100011112212233100011111111112222--11-----11110-1----------45678888877778--88761
Q gi|254780967|r  119 IYDGRDMAKVLSIAMMIFMIMPILAPSIGQATV--AL-----SGGWI-G----------IFVCMGVITTFITL--WYYIR  178 (398)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~--~~-----~~gWr-~----------~f~~~~~~~~~~~~--~~~~~  178 (398)
                      ..++|+..|..++.-.....+..+|..+--.+.  ..     ..+-+ .          ...+.+++.....+  ....+
T Consensus       130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~  209 (461)
T KOG3098         130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF  209 (461)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_conf             48766687879999999998898512754024675366554543023321001345589999999999989877662133


Q ss_pred             CCCCCCHHHHCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHH--CCCCC--CHHHHHHHH
Q ss_conf             6788640221011--111123331000000000256777887631001468-8876545543--15311--015889988
Q gi|254780967|r  179 FPETLDPRDVRPL--NLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV-NSSQQIYVGI--YQLGN--LFPIAFAVG  251 (398)
Q Consensus       179 ~pet~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~--~~~~~~~~~  251 (398)
                      .|.......+++.  ...+..+...+++++|+....... ++..+....+. +..|.-....  .....  ..++.....
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~-f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~  288 (461)
T KOG3098         210 LPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPF-FFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGI  288 (461)
T ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             676303330430333199999999998658719999999-9999999999986253151012541476316999999997


Q ss_pred             HHHHHHHHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC------------CCCHHHHHHHHHHHHHH
Q ss_conf             6576778899999850---01565124688778889999999987325777------------64037998998999999
Q gi|254780967|r  252 GFAMSIASFINSRLVE---KFGIRRVSHYSLLIFFMITGSWLLVQITSNHP------------IHLLIFIAFFFLASFQF  316 (398)
Q Consensus       252 ~~~~~~~~~~~~~l~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~  316 (398)
                      +.+...++...+.+.+   |+|+++....+............+ ....+.+            ..........++.|++.
T Consensus       289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l-~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D  367 (461)
T KOG3098         289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHL-SFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD  367 (461)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             6899987787998704654125573036788999999899730-465447888876665444500348999999975389


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999998534667699999999999999999
Q gi|254780967|r  317 GLINSNFSSISMEPFSHLAGTASSIFGFINTVISTI  352 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~  352 (398)
                      +..............|+++..+.++..+-+...+.+
T Consensus       368 ~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v  403 (461)
T KOG3098         368 ACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCV  403 (461)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             999999999998871674388899999998887777


No 140
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.30  E-value=1.5e-11  Score=80.17  Aligned_cols=163  Identities=20%  Similarity=0.270  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
Q ss_conf             69999999999-81999889999999999999999999999998650828999999999999999851001101110022
Q gi|254780967|r   20 IILPCLPKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMR   98 (398)
Q Consensus        20 ~~~p~lp~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r   98 (398)
                      .++..+|.+++ .+|.++....+++...+.+|.++|+++.|+++.+.=.-...-+|.+...++.+...+..+.+...+.-
T Consensus       255 ~~l~~~p~~~k~~Lg~~~~~~~~~Lla~~~iGI~~GS~la~~ls~~~ie~glvP~Ga~g~~l~~~~l~~~~~~~~~~~~l  334 (1150)
T PRK08633        255 LLLANFPAYGKEELGLDNTFQVQYLLAASAIGIGIGSLLAGRLSKRYIELGIVPLGAFGMTLMLFLLPAASSLPSVLLLF  334 (1150)
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998899999983898089999999999999999999999996796642545889999999999999876589999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32100111111100012332100011112212233100011111111112222111111014567888887777888761
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~  178 (398)
                      ++.|+++|.+.++.++++....++++|+|.++-.+...+++.+.+..+...+.....+=...|++++++.++..++.+..
T Consensus       335 ~~~G~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNi~n~~~mv~~~~~~~~l~~~~~s~~~~f~~la~~~~~~~~~~~~~  414 (1150)
T PRK08633        335 FLFGFSGGLFIVPLNALIQFRAPEKELGEVLAANNFLQNVGMLLFLGLTWLFSYLGISPAGLFYFIALVTLIGTLYTLRK  414 (1150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999867756778999874188655234228989999999999999999999818899999999999999999999998


Q ss_pred             CCCC
Q ss_conf             6788
Q gi|254780967|r  179 FPET  182 (398)
Q Consensus       179 ~pet  182 (398)
                      +||.
T Consensus       415 lP~~  418 (1150)
T PRK08633        415 LPDS  418 (1150)
T ss_pred             HHHH
T ss_conf             5799


No 141
>TIGR00895 2A0115 MFS transporter, aromatic acid:H+ symporter (AAHS) family; InterPro: IPR004746 Benzoate transport proteins belong to this group. Benzyl alcohol, benzaldehyde, benzoate, and anthranilate are metabolized via catechol, cis,cis-muconate, and the beta-ketoadipate pathway in some bacteria.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.27  E-value=3.4e-09  Score=67.17  Aligned_cols=160  Identities=15%  Similarity=0.187  Sum_probs=108.9

Q ss_pred             HHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             8765455431531-10158899886576778899999850015-----65124688778889999999987325777640
Q gi|254780967|r  229 SSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFG-----IRRVSHYSLLIFFMITGSWLLVQITSNHPIHL  302 (398)
Q Consensus       229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (398)
                      ..|.+-+ ..+.+ .+.+..++..-+++.+|+++.|++.||+|     |||+...+...+......+.+..       ..
T Consensus        39 ~ap~l~~-~w~l~~~~~G~l~S~gL~G~~~Gal~~G~~aDr~GhlGvsR~r~l~~~~llF~~ft~~~a~A~-------~~  110 (413)
T TIGR00895        39 AAPALSA-EWGLDPVQLGFLLSAGLIGMAFGALFFGPLADRIGHLGVSRKRVLLWSILLFSVFTLLCALAT-------NV  110 (413)
T ss_pred             HHHHHHH-HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-------CH
T ss_conf             9768888-858891410078999999999879999878786503541399999999999999999988740-------47


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Q ss_conf             379989989999999999999999985346-67699999999999999999999999998311799999999--999999
Q gi|254780967|r  303 LIFIAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFF--GIAVSS  379 (398)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~  379 (398)
                      .-+.++=++.+.|.|-..|+.+++..|-.| |+|+++-+++..-..+|...++.+.+++..+..|.......  .-.+..
T Consensus       111 ~qL~~~R~~AGlGlGg~~pn~~aL~sEY~p~r~R~~~vg~~~~Gy~~G~~~gg~l~~~LiP~~GWr~~F~vGG~~Pl~ll  190 (413)
T TIGR00895       111 TQLLILRFLAGLGLGGLMPNLIALVSEYAPKRFRGTAVGLMFCGYAIGAAVGGFLAGWLIPAFGWRSLFYVGGIIPLLLL  190 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999985549999999999998435763346688888876789999999998887544407999999999999999


Q ss_pred             HHHHHHHHCCHHHHHHH
Q ss_conf             99999994220003430
Q gi|254780967|r  380 FICILIVEKNQMFRKTE  396 (398)
Q Consensus       380 ~~~~~~~~~~~~~r~~~  396 (398)
                      .+....+++...+...|
T Consensus       191 ~~l~~~LPES~~fl~~k  207 (413)
T TIGR00895       191 LLLMRFLPESIDFLVEK  207 (413)
T ss_pred             HHHHHHCCCCHHHHHHH
T ss_conf             99997768768989770


No 142
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27  E-value=3.9e-10  Score=72.38  Aligned_cols=167  Identities=10%  Similarity=0.075  Sum_probs=113.1

Q ss_pred             HHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC----CC
Q ss_conf             8657669999-999999819998899999999999999999999999986508289999999999999998510----01
Q gi|254780967|r   15 SLGIDIILPC-LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT----IN   89 (398)
Q Consensus        15 ~~~~~~~~p~-lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~----a~   89 (398)
                      -++-....+. -|.+-+|+|.|.++++...-..-.....+|.++.|.+..|+|.+|.+.++.++..++++....    -+
T Consensus       235 KlgDa~~g~M~~pFyl~dlGFS~~eIa~v~K~~Gl~atI~G~~lGG~li~R~Gl~raL~i~gilqalsNL~f~~LA~~g~  314 (490)
T PRK11010        235 KLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDK  314 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             96799999986688774328888899988858999999999999999999972999999999999967899999997088


Q ss_pred             CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             10111002232100111111100012332100011112212233100011111111112222111111014567888887
Q gi|254780967|r   90 SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT  169 (398)
Q Consensus        90 ~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~  169 (398)
                      |.+.+.+.-.+..++.|...++-.++++..++++..+..+++.++..+++..+-....|.+. +..||..-|.+..+.++
T Consensus       315 ~~~~l~~aI~~Enf~~G~gtaAfvAyLssL~n~~ftATQYALlSSl~al~r~~~g~~SG~lv-e~~Gw~~FFi~t~~~~I  393 (490)
T PRK11010        315 NLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFV-EAHGWPTFYLFSVAAAV  393 (490)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH-HHCCCHHHHHHHHHHHH
T ss_conf             48999999999988878999999999998538322599999999999722563156588984-75183879999999998


Q ss_pred             HHHHHHHHHCCCCC
Q ss_conf             77788876167886
Q gi|254780967|r  170 FITLWYYIRFPETL  183 (398)
Q Consensus       170 ~~~~~~~~~~pet~  183 (398)
                      -..++.+ ..+++.
T Consensus       394 P~llLL~-~~r~~l  406 (490)
T PRK11010        394 PGLLLLL-VCRQTL  406 (490)
T ss_pred             HHHHHHH-HHHHHH
T ss_conf             9999999-997353


No 143
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.26  E-value=5.4e-11  Score=77.10  Aligned_cols=160  Identities=19%  Similarity=0.252  Sum_probs=112.0

Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9998-865766999999999981999889999999999999999999999998650828999999999999999851001
Q gi|254780967|r   11 MAIN-SLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN   89 (398)
Q Consensus        11 ~~~~-~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~   89 (398)
                      ..++ ..+.+.++|.+  +.++|+.++.+.+... +.+-+.-++..+..|+++||+|.+|++.......+++.....+.+
T Consensus       229 ~tFG~Fvgfs~~l~~~--~~~~fg~~~~~Ag~~a-~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~  305 (417)
T COG2223         229 ATFGGFVGFSAYLPMY--LVTQFGLSPVTAGLIA-FLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL  305 (417)
T ss_pred             HHHHHHHHHHHHHHHH--HHHHCCCCHHHHHHHH-HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999--9986498723188999-987889999985044443313534479999999999999997056


Q ss_pred             -------CHHH----HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -------1011----10022321001111111000123321000111122122331000111111111122221111110
Q gi|254780967|r   90 -------SFTG----MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI  158 (398)
Q Consensus        90 -------~~~~----l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr  158 (398)
                             +...    ++...+..|+|.+.    ....+...++ ++.+.+.++.....++|...-|..-+...+...+++
T Consensus       306 ~~~~~~~~~~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~  380 (417)
T COG2223         306 TGFGHGGSFVVFVAVFLALFVFAGLGNGS----VFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYT  380 (417)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCCH----HEEECHHHHH-HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
T ss_conf             34466764399999999999991567630----0331318778-664678879988542566540489999998426379


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             14567888887777888761
Q gi|254780967|r  159 GIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus       159 ~~f~~~~~~~~~~~~~~~~~  178 (398)
                      ..|++...+.+++.++.+..
T Consensus       381 ~~f~~~~~~~~~a~v~~~~~  400 (417)
T COG2223         381 GAFMLLLAFYLVALVLTWAL  400 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999


No 144
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.25  E-value=2.6e-11  Score=78.89  Aligned_cols=143  Identities=13%  Similarity=0.097  Sum_probs=48.5

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-CCCCHHHHCCCCCCCCCCC
Q ss_conf             999981999889999999999999999999999998650828999999999999999851-0011011100223210011
Q gi|254780967|r   27 KISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV-TINSFTGMLCMRLIQGIGG  105 (398)
Q Consensus        27 ~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~-~a~~~~~l~~~r~l~G~g~  105 (398)
                      .+++.-|.|.++++ +.+-.|-++..+|.+..|+++|| +.|+.+.....+..+..+... ..++.+...+.-++.|+..
T Consensus       237 ~L~~v~g~s~~~vs-~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~  314 (394)
T COG2814         237 FLESVAGFSVSAVS-LVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF  314 (394)
T ss_pred             HHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             99873599876889-99999989999987777640202-10669999999999999999983111999999999999986


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             11111000123321000111122122331000111111111122221111110145678888877778
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITL  173 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~  173 (398)
                      .......+..+++ ..||.+..+.++....+++|..+|..+|+.+++. +|++...+..+++.++...
T Consensus       315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~~a~~  380 (394)
T COG2814         315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LGYAATGWVGAALLLLALL  380 (394)
T ss_pred             HHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHH
T ss_conf             3015678887502-4777437999999999999999999998999981-0357789999999999999


No 145
>KOG4332 consensus
Probab=99.25  E-value=1.5e-10  Score=74.69  Aligned_cols=309  Identities=17%  Similarity=0.130  Sum_probs=164.7

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf             98199988999999999999999999999999865082899999999999999985100110111002232100111111
Q gi|254780967|r   30 DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPR  109 (398)
Q Consensus        30 ~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~  109 (398)
                      +.++.-..+++++-+..+--. .+...+.|.++|+-|||+.-+.-.+.+.+++ +.-.++++-.++++|++-|+..+...
T Consensus        65 stYgFgkG~IgqLfiaGfgSs-mLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLF  142 (454)
T KOG4332          65 STYGFGKGDIGQLFIAGFGSS-MLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLF  142 (454)
T ss_pred             HHCCCCCCCCCEEEECCCCHH-HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH-HHHCCCCEEEEEEHHHHHHHHHHHHH
T ss_conf             120756770110221014147-8899898887766256540141038899999-86048753787525455017899999


Q ss_pred             CCCHH-HHHHHHCCCCCCCCCCCCC--------CEECCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             10001-2332100011112212233--------1000111111111122221-111110145678888877778887616
Q gi|254780967|r  110 IITIS-IIRDIYDGRDMAKVLSIAM--------MIFMIMPILAPSIGQATVA-LSGGWIGIFVCMGVITTFITLWYYIRF  179 (398)
Q Consensus       110 ~~~~a-~i~~~~~~~~~~~~~~~~~--------~~~~~g~~igp~ig~~l~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~  179 (398)
                      ..-.+ ++.|..+  +|+----++.        .++.+-.+++...|..+.+ ...|--.+|-..+.+..+.........
T Consensus       143 SaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W  220 (454)
T KOG4332         143 SAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSW  220 (454)
T ss_pred             HHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999887533--14972765457888889850339999998888888987366887703777799999899997346


Q ss_pred             CCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             7886402210111111233310000000002567778876310014688-876545543153110158899886576778
Q gi|254780967|r  180 PETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVN-SSQQIYVGIYQLGNLFPIAFAVGGFAMSIA  258 (398)
Q Consensus       180 pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (398)
                      .|.-.+..+++.-..+.....+.+.+|++.....-+..+.-+.++.|.. +.|.+-.+..+.+  .+..++....+.+.|
T Consensus       221 ~ENygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP--hGfiFatFMlASmLG  298 (454)
T KOG4332         221 SENYGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP--HGFIFATFMLASMLG  298 (454)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC--CHHHHHHHHHHHHHH
T ss_conf             440699135389999855768887442088988999999742152245663366799855687--200899999999873


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999985001565124688778889999999987325---777640379989989999999999999999985346676
Q gi|254780967|r  259 SFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITS---NHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLA  335 (398)
Q Consensus       259 ~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      +-+..|+..|-..+.-.... +...+....+.+...+.   ...-....-...+...-.+.|+.+|...-.-.+..|+.+
T Consensus       299 SSla~Rl~s~s~~~ve~ymq-ivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea  377 (454)
T KOG4332         299 SSLASRLLSRSSPKVESYMQ-IVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA  377 (454)
T ss_pred             HHHHHHHHHCCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
T ss_conf             68999987248855420899-99999999999999873347776770688999999999986322678999875187777


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780967|r  336 GTASSIFGFINT  347 (398)
Q Consensus       336 G~a~~l~~~~~~  347 (398)
                        .+.++|+.+.
T Consensus       378 --rstimNfFRv  387 (454)
T KOG4332         378 --RSTIMNFFRV  387 (454)
T ss_pred             --HHHHHHHEEC
T ss_conf             --7635654013


No 146
>KOG3762 consensus
Probab=99.24  E-value=5.4e-09  Score=66.10  Aligned_cols=153  Identities=20%  Similarity=0.154  Sum_probs=83.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             00000000256777887631001468887654554-31531101588998865767788999998500156512468877
Q gi|254780967|r  202 LIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVG-IYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLL  280 (398)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~  280 (398)
                      +++.+++...+ +..+..++....+....-++..+ ..+....++..-...-.+.+..-++..++.+|.|.-++...++.
T Consensus       366 ~~~~s~~~llf-f~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa  444 (618)
T KOG3762         366 KVFASPHILLF-FFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA  444 (618)
T ss_pred             HHHCCCCEEEH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHH
T ss_conf             98428877851-48999988799999999999986158854253212255412338899999999998366112553156


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88899999999873257776403799899899999999999999999853-46676999999999999999999999999
Q gi|254780967|r  281 IFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQ  359 (398)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~  359 (398)
                      +...-.   +...  ...  ..|.....-.+-+...+.++....+++... +|+.+.++.++........|--.|.++|.
T Consensus       445 ~~~~Rf---~~~S--~L~--n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG  517 (618)
T KOG3762         445 CNVGRF---LYYS--YLQ--NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGG  517 (618)
T ss_pred             HHHHHH---HHHH--HHC--CCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             777899---9999--755--824111099987899999999999999850897523899999988760357535644300


Q ss_pred             HHH
Q ss_conf             983
Q gi|254780967|r  360 SFN  362 (398)
Q Consensus       360 ~~~  362 (398)
                      ...
T Consensus       518 ~~v  520 (618)
T KOG3762         518 FVV  520 (618)
T ss_pred             HHH
T ss_conf             221


No 147
>TIGR00890 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741   Oxalate/formate antiporters and many, as yet, uncharacterised proteins belong to this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=99.24  E-value=4.1e-11  Score=77.80  Aligned_cols=145  Identities=16%  Similarity=0.170  Sum_probs=93.0

Q ss_pred             HHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH-H--HCCCCCCC
Q ss_conf             99999819-99889999999999999999999999998650828999999999999999851001101-1--10022321
Q gi|254780967|r   26 PKISDSLH-LSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFT-G--MLCMRLIQ  101 (398)
Q Consensus        26 p~i~~~l~-~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~-~--l~~~r~l~  101 (398)
                      -++.++|. .+..... +..|.+-+..+.+-+++|.+|||+||.|.+-++..+.+++.+...+.+++. -  +++.=++.
T Consensus       266 ~~yg~~L~~~~~g~l~-~~vs~~~~~Ng~~R~~~G~~sDk~gr~~~m~~~~~isav~~~~~~~~~~~~n~V~FlA~~~~~  344 (429)
T TIGR00890       266 KPYGRSLGDLDVGALV-LAVSIISLFNGGGRPVLGAVSDKIGRLKTMSIVFGISAVGMLAMLFIPKISNDVLFLALVALV  344 (429)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9988888888999999-999999999988899999997431005566777689999999999899874228999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEC-------------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             001111111000123321000111122122331000-------------1111111111222211111101456788888
Q gi|254780967|r  102 GIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFM-------------IMPILAPSIGQATVALSGGWIGIFVCMGVIT  168 (398)
Q Consensus       102 G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~-------------~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~  168 (398)
                      ++..|.....-+.+.+|.|.+++.++..|+...+.+             ++.++|..+++.+.+ ..||+..|++.+...
T Consensus       345 ~ft~Gg~~~lFP~l~s~~FG~~~~~~NYG~~y~A~aGyrireymntfqs~agi~gg~~~~~~~~-~~G~~~~f~~~~~~~  423 (429)
T TIGR00890       345 AFTWGGTFSLFPSLVSDIFGPKYSAANYGLLYTAKAGYRIREYMNTFQSVAGIFGGLIASLVLT-EIGFKVTFLVTAALA  423 (429)
T ss_pred             HHCCCHHEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf             8423013211102210000102214530378763313689999888888999999999999998-884999999999999


Q ss_pred             HHHH
Q ss_conf             7777
Q gi|254780967|r  169 TFIT  172 (398)
Q Consensus       169 ~~~~  172 (398)
                      +...
T Consensus       424 l~s~  427 (429)
T TIGR00890       424 LLSL  427 (429)
T ss_pred             HHHH
T ss_conf             9998


No 148
>pfam06963 FPN1 Ferroportin1 (FPN1). This family represents a conserved region approximately 100 residues long within eukaryotic Ferroportin1 (FPN1), a protein that may play a role in iron export from the cell. This family may represent a number of transmembrane regions in Ferroportin1.
Probab=99.23  E-value=7.9e-09  Score=65.18  Aligned_cols=341  Identities=13%  Similarity=0.081  Sum_probs=160.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--
Q ss_conf             988657669999999999819998899999999999----99999999999998650828999999999999999851--
Q gi|254780967|r   13 INSLGIDIILPCLPKISDSLHLSNENYGQHLISFYL----IGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV--   86 (398)
Q Consensus        13 ~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~----~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~--   86 (398)
                      +...+.-+..=+.|....+++-..-    +..+.|-    +...+..+..|.+.||..|.|++..++..--++...++  
T Consensus        13 ls~wgdRmw~Fav~lfl~~l~P~sL----l~~avygl~~~ls~i~~gp~vG~~vD~~~Rl~vir~~i~~Qn~sv~~s~~~   88 (433)
T pfam06963        13 LSTWGDRMWEFAVPLFMAELFPGSL----LPAAVYGLVTSLSALVLGPIVGQLVDRLPRLKAIRLSLLLQNLSVAVSGAL   88 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8787788999999999999858863----999999999999999932788877334305899999999979999999999


Q ss_pred             ------CC-----CCHHHH---CCCCCCCCCCCCC-CCCCCHHHHHHHH------CCCCCCCCCCCCCCEECCCCCCCCC
Q ss_conf             ------00-----110111---0022321001111-1110001233210------0011112212233100011111111
Q gi|254780967|r   87 ------TI-----NSFTGM---LCMRLIQGIGGAA-PRIITISIIRDIY------DGRDMAKVLSIAMMIFMIMPILAPS  145 (398)
Q Consensus        87 ------~a-----~~~~~l---~~~r~l~G~g~~~-~~~~~~a~i~~~~------~~~~~~~~~~~~~~~~~~g~~igp~  145 (398)
                            ..     .+-+.+   ++.-.+.|.-+.. ......++-+||.      ++..+++.++...-.--.-.+++|.
T Consensus        89 ~~~~l~~~~~~~~~~~~~~~~lf~~~~~~~~i~~Las~~~~I~iERDWVVvia~~~~~~L~~~Na~mRRIDL~ckllaP~  168 (433)
T pfam06963        89 FIALFVVLSLLSTAASPLLIPLFAVLVLLGAVEKLASTANTVAIERDWVVVISGGRPIALAKMNATLRRIDLFCKLLAPL  168 (433)
T ss_pred             HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998445433567751999999999999999999975113578401699970898356787458889999999988999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-------HCCCCCCHHHHC-------CC-----------------CCC
Q ss_conf             11222211111101456788888777788876-------167886402210-------11-----------------111
Q gi|254780967|r  146 IGQATVALSGGWIGIFVCMGVITTFITLWYYI-------RFPETLDPRDVR-------PL-----------------NLY  194 (398)
Q Consensus       146 ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~-------~~pet~~~~~~~-------~~-----------------~~~  194 (398)
                      +-|.+++ ..+++..-.+.+.........-++       ..||-..+++++       +.                 ..+
T Consensus       169 ~~G~l~s-~~s~~~~~~~~~~~n~~S~~~Ey~ll~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (433)
T pfam06963       169 LVGLLLS-FVSLRAAAGFLLGWNLVSVVVEYFLLWSVYKSVPALSRKAEVRTARDEEANSELQEPANRPSIVKRVKESVK  247 (433)
T ss_pred             HHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             9999995-257599999999999999999999999998508375427755445544555431101220468999999899


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             12333100000000025677788763100146888765455431531-10158899886576778899999850015651
Q gi|254780967|r  195 AILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRR  273 (398)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~  273 (398)
                      ...++++..+++|.++. .+...+.+....+|-.....+.... +.+ ...+..-+...+..+.++++.+++.+|+|..|
T Consensus       248 ~~~~~w~~Y~~q~Vfla-slalalLY~TVLsf~~lmt~yL~~~-G~s~~~igi~Rg~~ai~Gi~~T~~~p~l~kriGl~r  325 (433)
T pfam06963       248 TQKDGWREYVRQPVFLA-SFALSLLYFTVLSFGTLMTAYLLHQ-GLSPSVIGGMRGGSAVTGLAGTFAYPFLEKRIGLLR  325 (433)
T ss_pred             HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHCCCHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99754999972814788-8999999998746728899999975-998999999999999999999998999998851588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH-HHHHHHHH-HHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             2468877888999999998732577764037998998-99999999-999-99999985346-67699999999999999
Q gi|254780967|r  274 VSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFF-LASFQFGL-INS-NFSSISMEPFS-HLAGTASSIFGFINTVI  349 (398)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~-~~~G~a~~l~~~~~~~~  349 (398)
                      .-.+++.....+...+.........+.+......++. +...-.|. .+. ..+.+.+|..| ++||..+++.+..+...
T Consensus       326 tGl~sl~~Q~~~L~~~v~s~~~~~s~~~~~s~~~l~~gi~lSRlGLW~fDL~~~ql~Qe~V~e~~Rg~v~gvq~Sl~~lf  405 (433)
T pfam06963       326 TGLWSLWWQLSCLALAVASVFLPGSSMSALSAFLLFGGVALSRIGLWSFDLAVTQLLQEGIPESERNVVGGTQNSLQSLF  405 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHH
T ss_conf             77999999999999999961117997116899999999999986698889999999970288542550228999999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999998
Q gi|254780967|r  350 STILGIIIGQSF  361 (398)
Q Consensus       350 ~~~~~~~~g~~~  361 (398)
                      -. .....+...
T Consensus       406 dl-l~~~~~Ii~  416 (433)
T pfam06963       406 EL-LKFAVTIIA  416 (433)
T ss_pred             HH-HHHHHHEEC
T ss_conf             99-998884253


No 149
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.22  E-value=8.1e-11  Score=76.14  Aligned_cols=154  Identities=17%  Similarity=0.216  Sum_probs=114.3

Q ss_pred             HHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf             999-9819998899999999999999999999999986508289999999999999998510011011100223210011
Q gi|254780967|r   27 KIS-DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGG  105 (398)
Q Consensus        27 ~i~-~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~  105 (398)
                      ... +|+|.|+.++.......... ..++.++.|+|.||+|.|+++..+++++.+.++...+...-..+.+.-.+.|...
T Consensus       277 ~fg~~~~gls~~~lll~g~~~~vv-A~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~  355 (438)
T COG2270         277 VFGAADLGLSSTELLLIGIALSVV-AALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSL  355 (438)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf             998887281288999999999999-9988899999997708842604899999999999997566099999999999840


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             11111000123321000111122122331000111111111122221111110145678888877778887616788
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPET  182 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet  182 (398)
                      |..+..+.++..+..|++|.++.+|+++.....+..+||.+-+...+.+.+-|..+....++..+.. ....+.|++
T Consensus       356 G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~  431 (438)
T COG2270         356 GGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL-LLLLRVKVP  431 (438)
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHEEEECCC
T ss_conf             2188888999998689852131310254411389999999999999871540128999999998617-627960378


No 150
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.22  E-value=1.5e-08  Score=63.67  Aligned_cols=27  Identities=7%  Similarity=-0.021  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             999999999999999999942200034
Q gi|254780967|r  368 ITIGFFGIAVSSFICILIVEKNQMFRK  394 (398)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~r~  394 (398)
                      ....+..+++.......--+..++.+|
T Consensus       361 ~m~~~s~lal~~~l~v~~~~~~~~~~~  387 (392)
T PRK10473        361 ILIACSIVSLLLILFVAPGRPVAAHEE  387 (392)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             999999999999999818987867678


No 151
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.21  E-value=1.1e-10  Score=75.49  Aligned_cols=23  Identities=26%  Similarity=0.222  Sum_probs=8.6

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             99999999999998650828999
Q gi|254780967|r   49 IGYGIAQIFYGPLSDRFGRKIVM   71 (398)
Q Consensus        49 ~~~~i~~~~~G~l~Dr~Grr~~l   71 (398)
                      ++..+|.|....+.|.+|-|..+
T Consensus       155 ~A~v~GvPlgt~ig~~~GWR~~F  177 (394)
T PRK10213        155 IALVIAAPLGSFLGELIGWRNVF  177 (394)
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             99998210898886001399999


No 152
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.20  E-value=4.6e-09  Score=66.46  Aligned_cols=26  Identities=4%  Similarity=-0.160  Sum_probs=17.6

Q ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHC
Q ss_conf             99999999999999942200034306
Q gi|254780967|r  372 FFGIAVSSFICILIVEKNQMFRKTEL  397 (398)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~r~~~~  397 (398)
                      ...+.+++.++++....-+.++++|-
T Consensus       366 ~~~~~~~~~~~l~~~l~l~~r~~~~~  391 (394)
T PRK11652        366 GLLMTLMGLLILLCWLPLASRMSHQG  391 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999999999999986344566


No 153
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=99.19  E-value=3.9e-08  Score=61.33  Aligned_cols=159  Identities=15%  Similarity=0.122  Sum_probs=122.5

Q ss_pred             HHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
Q ss_conf             9999999999-819998899999999999999999999999986508289999999999999998510011011100223
Q gi|254780967|r   21 ILPCLPKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRL   99 (398)
Q Consensus        21 ~~p~lp~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~   99 (398)
                      +...+|.+++ +||.+....| ++.+.+-+|..++.+...++-+|+++.+++..+...++++.+..++++|+|.....-+
T Consensus       237 ~~aLLPl~Ar~~l~gga~~yG-lLl~~~G~GAv~GAl~l~~lr~~~~~~~lv~~~~~~~a~~~~~la~~~~~~l~~~~l~  315 (524)
T pfam05977       237 VWALLPLVARDLLGGDAGFYG-ILLGAFGAGAVLGALILSRLRRRLSSERLVLLASVGFALCCLSLALSPSLWVAAIALL  315 (524)
T ss_pred             HHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             999999999998379814789-9999999889999998898750157243899999999999999996518999999999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHH
Q ss_conf             210011111110001233210001111221223310001111111111222211111101456788888777788-8761
Q gi|254780967|r  100 IQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLW-YYIR  178 (398)
Q Consensus       100 l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~-~~~~  178 (398)
                      +.|.+.=......++.+.-..|+.-|+|.++++.+.+.-|..+|..+=| .+....|-.....+.+...++...+ ..+.
T Consensus       316 ~~G~awi~~lst~n~~vQ~~~P~wvRgR~lslY~~v~~Ggma~Gs~~WG-~vA~~~g~~~aL~~aa~~l~~~~~~~~~~~  394 (524)
T pfam05977       316 LGGACWITALSTLNVAVQLASPRWVVGRALSVYLTVFFGGMAAGSWLWG-TVAEALGLTGALLLAAAALLAGAALGLRLR  394 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9989999999999899997087999999999999999856788899999-987300749999999999999999871202


Q ss_pred             CCC
Q ss_conf             678
Q gi|254780967|r  179 FPE  181 (398)
Q Consensus       179 ~pe  181 (398)
                      +|+
T Consensus       395 l~~  397 (524)
T pfam05977       395 LPE  397 (524)
T ss_pred             CCC
T ss_conf             788


No 154
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.19  E-value=5.3e-09  Score=66.16  Aligned_cols=34  Identities=18%  Similarity=0.038  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             9999999999999999998650828999999999
Q gi|254780967|r   44 ISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI   77 (398)
Q Consensus        44 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~   77 (398)
                      .....++-.++.++.|.+.|.+|-|.++..-...
T Consensus       121 ~~~~~~~~~~~p~iGg~l~~~~gWr~~F~~~~~~  154 (377)
T PRK11102        121 TLVMTIAPLLAPIIGGYLLVWFSWHSIFWVLALA  154 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             9999970488888779998135668999999999


No 155
>TIGR00892 2A0113 monocarboxylate transporter; InterPro: IPR004743 Proton-linked monocarboxylate transporters catalyse the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate.; GO: 0015355 secondary active monocarboxylate transmembrane transporter activity, 0015711 organic anion transport, 0016021 integral to membrane.
Probab=99.16  E-value=1e-10  Score=75.62  Aligned_cols=155  Identities=12%  Similarity=0.250  Sum_probs=130.4

Q ss_pred             HHHHH--HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHH--HHHHHHHHHHHHHCCCCHHH
Q ss_conf             69999--9999998199988999999999999999999999999865--082899999--99999999998510011011
Q gi|254780967|r   20 IILPC--LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDR--FGRKIVMMF--GLVIHIISTFIMVTINSFTG   93 (398)
Q Consensus        20 ~~~p~--lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr--~Grr~~l~~--g~~~~~i~~~~~~~a~~~~~   93 (398)
                      ...|.  +..+++|-|+++.+.+ +++|+--+.-.+.-|-.|.++.+  +-.|.-+++  +++..+++.++|+.|+||+.
T Consensus       275 lF~P~ifL~pYAkd~gv~~~~AA-fLLSi~gF~DifaRP~~Gl~Ag~~~~rP~~~YlFS~A~l~nGlt~L~ca~a~~Y~~  353 (475)
T TIGR00892       275 LFVPIIFLVPYAKDKGVDEYEAA-FLLSIIGFVDIFARPSVGLIAGLKLIRPRVQYLFSLALLFNGLTHLLCALASDYTG  353 (475)
T ss_pred             CCCHHHHCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             01103334752125689767789-99999999888886666876175220114678999999985178886130137401


Q ss_pred             HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             10022321001111111000123321000111122122331000111111111122221111110145678888877778
Q gi|254780967|r   94 MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITL  173 (398)
Q Consensus        94 l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~  173 (398)
                      |.+.-+.-|++-|.....-.-.+-|..+.+|-.+|.|+....-.....+||++.|-+++...+++.+|+..+..-+...+
T Consensus       354 LV~y~~~FG~sfG~vgal~Fe~LMd~VG~~rFssA~GLvt~ve~~avL~GPPlAG~L~D~~~~Y~y~f~~~G~~v~~agl  433 (475)
T TIGR00892       354 LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVLAGL  433 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             12577789768888999999998730587445157889999953465328623678856644535678899899999999


Q ss_pred             HH
Q ss_conf             88
Q gi|254780967|r  174 WY  175 (398)
Q Consensus       174 ~~  175 (398)
                      +.
T Consensus       434 fl  435 (475)
T TIGR00892       434 FL  435 (475)
T ss_pred             HH
T ss_conf             99


No 156
>KOG0569 consensus
Probab=99.14  E-value=4.4e-10  Score=72.11  Aligned_cols=157  Identities=16%  Similarity=0.130  Sum_probs=85.6

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC----CH--H---HHCC
Q ss_conf             9999981999889999999999999999999999998650828999999999999999851001----10--1---1100
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTIN----SF--T---GMLC   96 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~----~~--~---~l~~   96 (398)
                      .++-++-|++..+.. +....-..-..+..++...+.||+|||+.++.+..+..+..+....+.    ..  |   ..++
T Consensus       294 t~i~~~aG~~~~~a~-~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~  372 (485)
T KOG0569         294 TSIFKTAGFTPEEAQ-YANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA  372 (485)
T ss_pred             HHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999998699878889-9999999999999999999997149868999999999999999999999999866699999999


Q ss_pred             CCCCCCCCCC-CCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             2232100111-111100012332100011112212233100011111111112222111111014567888887777888
Q gi|254780967|r   97 MRLIQGIGGA-APRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWY  175 (398)
Q Consensus        97 ~r~l~G~g~~-~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~  175 (398)
                      +.++-.+.-+ +..|...-+.+|.+|++.|+.+.+.......+...+-... -..+....|= ..|....+...+..+..
T Consensus       373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~-fp~l~~~~g~-~~filF~i~~~~~~i~~  450 (485)
T KOG0569         373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA-FPPLQNVIGP-YVFILFVIPLAIFLIYL  450 (485)
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf             999999753147776117888974795406899999999999999999998-9999987343-65389899999999999


Q ss_pred             HHHCCCCCCH
Q ss_conf             7616788640
Q gi|254780967|r  176 YIRFPETLDP  185 (398)
Q Consensus       176 ~~~~pet~~~  185 (398)
                      ++.+|||+.+
T Consensus       451 y~~lPETkgr  460 (485)
T KOG0569         451 YRYLPETKGR  460 (485)
T ss_pred             HHHCCCCCCC
T ss_conf             9959676999


No 157
>TIGR00899 2A0120 sugar efflux transporter; InterPro: IPR004750   This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both Gram-negative and Gram-positive bacteria.; GO: 0015542 sugar efflux transmembrane transporter activity, 0008643 carbohydrate transport, 0016021 integral to membrane.
Probab=99.13  E-value=3.7e-10  Score=72.54  Aligned_cols=158  Identities=16%  Similarity=0.162  Sum_probs=119.4

Q ss_pred             HHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
Q ss_conf             669999999-99981999889999999999999-9999999999986508289999999999999998510011011100
Q gi|254780967|r   19 DIILPCLPK-ISDSLHLSNENYGQHLISFYLIG-YGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLC   96 (398)
Q Consensus        19 ~~~~p~lp~-i~~~l~~s~~~~~~~~~s~~~~~-~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~   96 (398)
                      ++|.-.+|- +.+|+|.++.-.|....++  .| -.-.....|++.+|+|+|+.+.++.+.....-......++.+.++-
T Consensus       216 ~ly~i~mpl~li~EL~l~~kl~G~~~g~A--AGlEiP~M~~Agy~~~R~Gkr~Lm~~A~~~g~~fy~~~~~~~~~~~~~~  293 (377)
T TIGR00899       216 ILYIINMPLFLINELGLPDKLAGLMMGTA--AGLEIPFMLLAGYLIKRLGKRRLMLLAVVAGVAFYTGLLLANSLWALLM  293 (377)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             78885227899986258418999999997--6556479999778888875899999999999999999985162899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             22321001111111000123321000111122122331000-11111111112222111111014567888887777888
Q gi|254780967|r   97 MRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFM-IMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWY  175 (398)
Q Consensus        97 ~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~-~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~  175 (398)
                      ..+++++..|...+.+.-|-.|.-|++-...+..+++.... +|.+++..++|.+.+ .|+++..|++..++..+..+. 
T Consensus       294 lq~lna~fiGi~~g~gmlYfqdLmP~~~gs~AttLy~n~~~G~G~i~ag~v~G~~~e-~W~~~Avy~~~~~~~~~a~~~-  371 (377)
T TIGR00899       294 LQLLNAIFIGILAGIGMLYFQDLMPGRAGSAATTLYTNTSRGVGWIIAGSVAGILAE-IWSYHAVYWFAIVMLIVALLV-  371 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-
T ss_conf             999999999999988999998627314458999999875213899999988669888-755799999999999999999-


Q ss_pred             HHHCC
Q ss_conf             76167
Q gi|254780967|r  176 YIRFP  180 (398)
Q Consensus       176 ~~~~p  180 (398)
                      ...++
T Consensus       372 l~~~~  376 (377)
T TIGR00899       372 LLRIK  376 (377)
T ss_pred             HHHHC
T ss_conf             98843


No 158
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.11  E-value=2e-09  Score=68.44  Aligned_cols=130  Identities=12%  Similarity=0.118  Sum_probs=77.5

Q ss_pred             HHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             765455431531-1015889988657677889999985001565124688778889999999987325777640379989
Q gi|254780967|r  230 SQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF  308 (398)
Q Consensus       230 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
                      .|.+ ++..+.+ .+.+...+...+...++.++.|.++||.+.|+....++....++...+....       ++..+...
T Consensus        52 ~p~l-~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~-------s~~~~~~l  123 (448)
T COG2271          52 MPAL-IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP-------SLFLFAVL  123 (448)
T ss_pred             CHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH-------HHHHHHHH
T ss_conf             6778-874598989999999999999999888766521467875442587999999999986217-------99999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q ss_conf             989999999999999999985346-6769999999999999999999999--9998311799
Q gi|254780967|r  309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIII--GQSFNGTTYP  367 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~--g~~~~~~~~~  367 (398)
                      ..+.+...+.-.|++......=++ +.||+.-++.|..++++|++.+++.  +.+.++..|.
T Consensus       124 ~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~  185 (448)
T COG2271         124 WVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR  185 (448)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCHH
T ss_conf             99989885279837786899875854567468874544422350579999999997542565


No 159
>PRK11043 inner membrane transport protein YdhC; Provisional
Probab=99.08  E-value=8.1e-08  Score=59.61  Aligned_cols=24  Identities=17%  Similarity=0.325  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf             999999999999986508289999
Q gi|254780967|r   49 IGYGIAQIFYGPLSDRFGRKIVMM   72 (398)
Q Consensus        49 ~~~~i~~~~~G~l~Dr~Grr~~l~   72 (398)
                      ++-.++.++.|.+.|.+|-|.++.
T Consensus       141 i~p~laP~iGg~l~~~~gWr~iF~  164 (401)
T PRK11043        141 LSPALAPLLGAWLLNHFGWQAIFA  164 (401)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             999999889999970478699999


No 160
>TIGR01272 gluP glucose/galactose transporter WARNING; InterPro: IPR005964    This model describes the glucose/galactose transporter in bacteria. Putative transporters in bacterial species have been isolated by functional complementation, which restored its functional activity .; GO: 0005354 galactose transmembrane transporter activity, 0005355 glucose transmembrane transporter activity, 0015757 galactose transport, 0015758 glucose transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=99.04  E-value=2.2e-08  Score=62.69  Aligned_cols=278  Identities=12%  Similarity=0.158  Sum_probs=162.8

Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC----------------
Q ss_conf             0111002232100111111100012332100011112212233100011111111112222111----------------
Q gi|254780967|r   91 FTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS----------------  154 (398)
Q Consensus        91 ~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~----------------  154 (398)
                      |..++.+-|+.+=|.....+..+.|++-.=+.|..++.+...+..+.++..++|..++.++...                
T Consensus        10 Y~~~L~aLFVlaSG~T~~Q~A~NPYv~iLG~~E~Aa~Rl~l~~~~N~l~~~~AP~~~~~L~L~~~~d~s~~~A~a~pa~k   89 (322)
T TIGR01272        10 YVLFLGALFVLASGLTILQVAANPYVSILGKIETAASRLALTQAFNSLGTTVAPLFGGVLILSGAGDLSMQVATANPAMK   89 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             99999999999833788776431023105882147899999999876557888899999999999998899873076788


Q ss_pred             --------CCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH
Q ss_conf             --------111014567888-88777788876167886402210111111233310000000002567778876310014
Q gi|254780967|r  155 --------GGWIGIFVCMGV-ITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILG  225 (398)
Q Consensus       155 --------~gWr~~f~~~~~-~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (398)
                              ..-|.+|.+++. +.++........+||-.++++.+..+.+ ...+....++.++.|.-.++.+...+....
T Consensus        90 eqllaA~A~~v~~PYLllA~~laVLAi~~~~~~LP~~~~~~~~~~~~~~-~~~~Kt~~~Q~~HL~LG~~g~FVYVG~EV~  168 (322)
T TIGR01272        90 EQLLAAEAEKVKLPYLLLAGALAVLAIIFAFLKLPELQEADVNRSSSKD-TTLQKTSAFQFTHLVLGALGIFVYVGAEVS  168 (322)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHEECCHHH
T ss_conf             8899887865166689999999999999998438876742001222210-001110367888899878775410000101


Q ss_pred             HHHHHHHHHHH--HCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             68887654554--31531101588998865-76778899999850-0156512468877888999999998732577764
Q gi|254780967|r  226 FVNSSQQIYVG--IYQLGNLFPIAFAVGGF-AMSIASFINSRLVE-KFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH  301 (398)
Q Consensus       226 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (398)
                      .-.....+..+  ..++++...-.+..... +.++|.+...-..+ +....|.....    ......+.+.......   
T Consensus       169 ~G~~l~~f~~~~~~~Glp~~~a~~~~a~~~G~~~~G~~~G~Av~~n~I~~~~~La~~----A~~a~lL~~~a~~T~G---  241 (322)
T TIGR01272       169 VGSFLVNFLSEAHVLGLPEDQAAHFVAYTWGGALVGRFIGSAVMRNKISQGRVLALN----AFLAVLLVLVAVLTSG---  241 (322)
T ss_pred             HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH----HHHHHHHHHHHHHHCC---
T ss_conf             335887406886164276677899999999999999999999875203313113899----9999999999986313---


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0379989989999999999999999985346676999999999999999999999999983117999999999999999
Q gi|254780967|r  302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSF  380 (398)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  380 (398)
                       .+........|+.+++++|....++.+..+++..+.+++. .+...||++.|.+-+.+.|.-  .+...|.++.+.+.
T Consensus       242 -~va~~~v~a~Gl~N~~MfP~IF~LAl~~LG~~T~~GS~~L-~laI~GGAIvP~l~~~L~~~l--~~~L~F~Gl~v~CY  316 (322)
T TIGR01272       242 -YVAMWAVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-ILAIVGGAIVPLLQGSLADAL--GIQLAFLGLPVVCY  316 (322)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHH
T ss_conf             -7999999999888877645689999974123101247999-999863678999999998863--50025354669989


No 161
>TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663   The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs .   This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane.
Probab=99.03  E-value=1.4e-09  Score=69.26  Aligned_cols=111  Identities=14%  Similarity=0.175  Sum_probs=69.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             01588998865767788999998500156512468877888999999998732577764037998998999999999999
Q gi|254780967|r  243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN  322 (398)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (398)
                      ..++..+...++..+++++.+++.+++|+|+-.....+...+.......    ......+..+++.=.+.|++.|.....
T Consensus       135 ~~~~~v~~~~~G~~~g~l~~g~~~~~~GRk~~l~~~~~~~v~g~~~~~~----~~~~~~~~~~~~gR~l~G~g~G~~s~~  210 (572)
T TIGR00879       135 LWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIVALLFVIGAILMGA----AATALSVEMLIVGRVLLGIGVGIASAL  210 (572)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999999999999999987556777533626889999999999999997----531020588999999999853189998


Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999998534-667699999999999999999999999
Q gi|254780967|r  323 FSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIG  358 (398)
Q Consensus       323 ~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g  358 (398)
                      ...+..|.. ++.||...++++.. ...|.+.+...+
T Consensus       211 ~P~Y~sE~AP~~lRG~~~~~~ql~-~t~G~l~a~~~~  246 (572)
T TIGR00879       211 VPMYISEIAPKALRGALVSLYQLA-ITIGILVAYGFG  246 (572)
T ss_pred             HHHHHHHCCCHHHCCHHHHHHHHH-HHHHHHHHHHHH
T ss_conf             999897338565574012578999-999999999999


No 162
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.00  E-value=2.5e-09  Score=67.94  Aligned_cols=162  Identities=13%  Similarity=0.113  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----------
Q ss_conf             69999999999-8199988999999999999999999999999865082899999999999999985100----------
Q gi|254780967|r   20 IILPCLPKISD-SLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI----------   88 (398)
Q Consensus        20 ~~~p~lp~i~~-~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a----------   88 (398)
                      .++..+|.+++ .++.++..++ +.++.+.+|.++|++..|+++.+.=.-...-+|.+..++..+-..++          
T Consensus       244 ~~l~~~p~~~k~~l~~~~~~~~-~lla~fsiGI~~GS~la~~ls~~~ie~glvp~Ga~g~~~~~~~L~~~~~~~~~~~~~  322 (1139)
T PRK06814        244 VVLSQLPLLAKDTLGGDENVVT-LFLAVFSIGIAVGSFLCSKLLEGEITLLYVPIGALGMGIFGLDLAFASSSVPAEPTQ  322 (1139)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf             9999709999998189788999-999999999999999999994798013300788999999999999871247788503


Q ss_pred             ----------CCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ----------1101110022321001111111000123321000111122122331000111111111122221111110
Q gi|254780967|r   89 ----------NSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI  158 (398)
Q Consensus        89 ----------~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr  158 (398)
                                ++.|.+.+.-++.|+++|.+.++.++++..+.|+++|+|.++-.+...+++.+.+..+...+.....+=.
T Consensus       323 ~~~~~~f~~~~~~~~~~~~l~~~g~~gGlfiVPL~A~iQ~~a~~~~r~rviAanNiln~~~Mv~~~~~~~~l~~~~~s~~  402 (1139)
T PRK06814        323 LKSILVFLSKRHGWRILIDLFFLAIIGGLYIVPLFAALQAWANPAHRARVIAANNVINAIFMVGGTIILAVLQALGFSIP  402 (1139)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             65799997162349999999999974500452258998852887666787799999999999999999999998398899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             145678888877778887616788
Q gi|254780967|r  159 GIFVCMGVITTFITLWYYIRFPET  182 (398)
Q Consensus       159 ~~f~~~~~~~~~~~~~~~~~~pet  182 (398)
                      ..|++.+++.++..+..+..+||.
T Consensus       403 ~~f~~~~~~~~~~~~y~~~~lP~~  426 (1139)
T PRK06814        403 WILLFLALANLIVAIYILKLLPTN  426 (1139)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999980899


No 163
>PRK11195 major facilitator family transporter; Provisional
Probab=98.97  E-value=6.4e-09  Score=65.69  Aligned_cols=21  Identities=0%  Similarity=-0.097  Sum_probs=8.8

Q ss_pred             HHHHHHHHHHHHHCCHHHHHH
Q ss_conf             999999999999422000343
Q gi|254780967|r  375 IAVSSFICILIVEKNQMFRKT  395 (398)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~r~~  395 (398)
                      ....+.......+|++.++++
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~  405 (415)
T PRK11195        385 FVALAMWLLWRWHRRNQRQFD  405 (415)
T ss_pred             HHHHHHHHHHHHHHHCCCCCC
T ss_conf             999999999999871034266


No 164
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.96  E-value=1.2e-08  Score=64.12  Aligned_cols=29  Identities=14%  Similarity=0.394  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             99999988657669999999999819998
Q gi|254780967|r    8 AMLMAINSLGIDIILPCLPKISDSLHLSN   36 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~p~lp~i~~~l~~s~   36 (398)
                      +.++.+--+......|..|.+++.++...
T Consensus        50 GlLTtLPll~fg~~ap~a~~Lar~~g~er   78 (395)
T COG2807          50 GLLTTLPLLAFGLFAPAAPRLARRFGEER   78 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89998899999988754079999875688


No 165
>TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638   This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane.
Probab=98.95  E-value=2.3e-08  Score=62.65  Aligned_cols=118  Identities=14%  Similarity=0.203  Sum_probs=77.0

Q ss_pred             HHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCHHHHCCC-
Q ss_conf             999-999819998899999999999999999999999-9865082899999999999999985100----110111002-
Q gi|254780967|r   25 LPK-ISDSLHLSNENYGQHLISFYLIGYGIAQIFYGP-LSDRFGRKIVMMFGLVIHIISTFIMVTI----NSFTGMLCM-   97 (398)
Q Consensus        25 lp~-i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~-l~Dr~Grr~~l~~g~~~~~i~~~~~~~a----~~~~~l~~~-   97 (398)
                      +|. +++=.|.++-|.| +...-.-+...+.+|+.|. +.||+|.|++..+|..++++++...++.    .+|+....- 
T Consensus       282 LP~~Lq~~~~~~~~~~G-l~~~P~gl~~~l~sPIaG~~~~~k~~~R~l~~ig~~~~a~~~y~~~~~~~~~~~f~~~~~~G  360 (501)
T TIGR00711       282 LPLYLQQVLGYTALQAG-LHILPVGLAPLLSSPIAGRMLGDKIDPRLLVTIGLILYAVGFYLRAFTLTPDTDFLAIALPG  360 (501)
T ss_pred             HHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf             99999986279978999-99988999999970799999841468068999999999999988852215578618888677


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf             2321001111111000123321000111122122331000111111
Q gi|254780967|r   98 RLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILA  143 (398)
Q Consensus        98 r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~ig  143 (398)
                      .+++|+|.++.+.+...+.-+.-|+||.+++.++.+..=.+|..+|
T Consensus       361 ~~i~G~g~~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~R~~gGSiG  406 (501)
T TIGR00711       361 QFIRGFGMGCFFMPLTTIALSKLPAEKVARGSSLSNFLRQLGGSIG  406 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999998755777612523576226899999999888999


No 166
>pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
Probab=98.94  E-value=1.1e-07  Score=58.85  Aligned_cols=107  Identities=12%  Similarity=0.064  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHHHHHHCCC--------CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC---CCCCCCCCCCCEEC
Q ss_conf             999999999999999851001--------1011100223210011111110001233210001---11122122331000
Q gi|254780967|r   69 IVMMFGLVIHIISTFIMVTIN--------SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGR---DMAKVLSIAMMIFM  137 (398)
Q Consensus        69 ~~l~~g~~~~~i~~~~~~~a~--------~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~---~~~~~~~~~~~~~~  137 (398)
                      |.+++|..++.+|.++.+++.        +...++++-.+.++|.|..-|...+.++|.++++   +|.+.+++...+.+
T Consensus         2 rtI~~g~~~~~~G~~lL~~sa~~~~~~~~~~~~~~~gL~liaiG~G~~K~nis~~~~~qy~~~~~~~~~s~F~~fY~~iN   81 (372)
T pfam00854         2 KTILLGSIIYAIGHVLLTLGAIPPSLSPVQVALFYIGLYLIALGTGGIKPNVSAFGADQFDETQDPRRDGFFSWFYFSIN   81 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             02899999999999999999666545642299999999999966457013289889986799860567768889999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             111111111122221111110145678888877778887
Q gi|254780967|r  138 IMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYY  176 (398)
Q Consensus       138 ~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~  176 (398)
                      +|..+++.+-+ .+.++.+|+..|.+.++..++..+..+
T Consensus        82 iGa~~~~~~~~-~l~~~~g~~~gF~i~~v~m~~~l~~f~  119 (372)
T pfam00854        82 AGSLIATIITP-YLQQNVGYPLGFGLPAVGMLLALLVFL  119 (372)
T ss_pred             HHHHHHCCHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998402667-887722357799871579999999999


No 167
>TIGR00893 2A0114 d-galactonate transporter; InterPro: IPR004744 D-galactonate transporters and other proteins that belong to the phthalate permease family are members of this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.94  E-value=2.7e-07  Score=56.73  Aligned_cols=134  Identities=13%  Similarity=0.097  Sum_probs=92.9

Q ss_pred             HHH-HHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             654-55431531-10158899886576778899999850015-6512468877888999999998732577764037998
Q gi|254780967|r  231 QQI-YVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFG-IRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIA  307 (398)
Q Consensus       231 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (398)
                      ... .++..+.+ .+.++.++.+..+..+..+..+++.||+| .|+.....+.+..+.+....+.... ........+..
T Consensus        17 a~~Gl~~DLg~~~~~~g~~~saF~~gY~~~~~p~g~~Ldr~Gh~~~~~~~~~v~Wg~f~~~~af~~~F-s~~~~~~~l~~   95 (427)
T TIGR00893        17 APTGLQEDLGLSAAQYGYVFSAFSIGYVLGQFPGGLLLDRIGHARKTLAVAIVLWGVFTLLQAFAGGF-STVTAYVSLYI   95 (427)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf             98666876088776888999999999999966689887521158999999999999999999755654-46768999999


Q ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99899999--99999999999985346-676999999999999999999999999983117
Q gi|254780967|r  308 FFFLASFQ--FGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTT  365 (398)
Q Consensus       308 ~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~  365 (398)
                      .-++.|..  -+...|....+..+=+| ++|+++.|..+..+..++.+.+|+.++...+..
T Consensus        96 lR~l~G~aGLEa~~~Pg~~~~~~~WFP~~eR~~~~s~f~~~~~lg~~~~~Pl~~~i~~~~~  156 (427)
T TIGR00893        96 LRVLLGAAGLEAPLFPGIIKIVASWFPAKERATAVSIFNSAQYLGGIIGGPLVGWILVHFS  156 (427)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999856567777513689987300465575779999999999999999899999998744


No 168
>pfam06813 Nodulin-like Nodulin-like. This family represents a conserved region within plant nodulin-like proteins.
Probab=98.92  E-value=9.3e-09  Score=64.80  Aligned_cols=151  Identities=9%  Similarity=0.013  Sum_probs=102.5

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC-------CCHHHHCCCC
Q ss_conf             999998199988999999999999999999999999865082899999999999999985100-------1101110022
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI-------NSFTGMLCMR   98 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a-------~~~~~l~~~r   98 (398)
                      |++++.+|.|..|... +.++--+|..++ ++.|.+.|++|++.++++|.....+|..+..++       +++|.+.+.-
T Consensus        26 ~~LK~~l~~sQ~qL~~-ls~a~d~G~~~G-~~~G~~~d~~pp~~vlliGa~~~~~GY~l~wL~v~~~i~~~~~~~~~l~~  103 (248)
T pfam06813        26 SALKSSLGYSQVQLNL-LGVAKDLGKNFG-WLSGLAAEYLPPWVVLLVGAAMGFVGYGVQWLAVTGKIPGLPYWLLCLAI  103 (248)
T ss_pred             HHHHHHHCCCHHHHHH-HHHHHHHHHHCC-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf             8999770989999999-999999887706-65899982326699999999999999999999972823789899999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32100111111100012332100011112212233100011111111112222111111014567888887777888761
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIR  178 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~~  178 (398)
                      ++.+.+.+.....+....-+.|| ++|+.+.++.-...+++..+=..+-..+...  +-..-++..++...+..+.....
T Consensus       104 ~l~~ns~~~~nTa~lvt~v~nFP-~~RG~vvgilK~f~GLs~AI~t~iy~a~~~~--~~s~~lllla~~p~~v~l~~~~~  180 (248)
T pfam06813       104 CLAGNSICWFNTASLVTCIRNFP-ESRGVVLGILKGYAGLSAAIYTQLYTAIFGN--DASSLLLLNALVPLVVSLVALYF  180 (248)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99827840431557888887474-3345267888776011299999999998089--86899999999999999988753


Q ss_pred             CCC
Q ss_conf             678
Q gi|254780967|r  179 FPE  181 (398)
Q Consensus       179 ~pe  181 (398)
                      +++
T Consensus       181 iR~  183 (248)
T pfam06813       181 IRP  183 (248)
T ss_pred             EEC
T ss_conf             252


No 169
>KOG0637 consensus
Probab=98.90  E-value=1.9e-08  Score=63.06  Aligned_cols=252  Identities=17%  Similarity=0.171  Sum_probs=133.5

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHHHH-HHHHHHHHHHHHHHCCCCHHHHCC-
Q ss_conf             99999999819998899999999999999999999999986----508289999-999999999998510011011100-
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD----RFGRKIVMM-FGLVIHIISTFIMVTINSFTGMLC-   96 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D----r~Grr~~l~-~g~~~~~i~~~~~~~a~~~~~l~~-   96 (398)
                      .-+|.+..++|++..-.+..-.-....| .+.|++.|..+|    ||||||.++ .+.....++.++..++.++..++. 
T Consensus        53 sy~tPyl~~lGvphk~~S~iw~~gPi~G-~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd  131 (498)
T KOG0637          53 SYLTPYLQSLGVPHKWSSIIWLCGPLSG-LLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD  131 (498)
T ss_pred             CCCCHHHHHCCCCCCCEECCCCCCCCCC-CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             3145999972898530003021356503-132323230013554312455616988668998889765007766687547


Q ss_pred             ----------------CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             ----------------2232100111111100012332100011112-21223310001111111111222211111101
Q gi|254780967|r   97 ----------------MRLIQGIGGAAPRIITISIIRDIYDGRDMAK-VLSIAMMIFMIMPILAPSIGQATVALSGGWIG  159 (398)
Q Consensus        97 ----------------~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~-~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~  159 (398)
                                      +--+.-++.-....++.+++.|...++++.+ +++......++|..+|-.+|+     +.+|+-
T Consensus       132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~-----y~~~~~  206 (498)
T KOG0637         132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS-----YLGLYK  206 (498)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCEEEEECCC-----CCCCEE
T ss_conf             854664068999998776788765556431599999886067666311240678888733500131334-----567247


Q ss_pred             --HHHHHHHHHHHHHHHHHHH-------CCCC---CCHHHHCCCCCC-----C-------CCCCCCCCCCC-CHHHHHHH
Q ss_conf             --4567888887777888761-------6788---640221011111-----1-------23331000000-00025677
Q gi|254780967|r  160 --IFVCMGVITTFITLWYYIR-------FPET---LDPRDVRPLNLY-----A-------ILHSFSLIFKH-RASTLYNI  214 (398)
Q Consensus       160 --~f~~~~~~~~~~~~~~~~~-------~pet---~~~~~~~~~~~~-----~-------~~~~~~~~~~~-~~~~~~~~  214 (398)
                        +|.....+-+.+..+-..+       .+|+   ....++++.+.+     .       ..+.+..+.+. |..|...+
T Consensus       207 ~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i  286 (498)
T KOG0637         207 IFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLI  286 (498)
T ss_pred             EEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCHHHHHHHH
T ss_conf             75008899999987899888877502420030210345100578898531000346750678871638638766889999


Q ss_pred             HHHHHHHCCHHHHHHHH-HHHHHHCCCC----C-------------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             78876310014688876-5455431531----1-------------0158899886576778899999850015651246
Q gi|254780967|r  215 ANSLTMGAILGFVNSSQ-QIYVGIYQLG----N-------------LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSH  276 (398)
Q Consensus       215 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~-------------~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~  276 (398)
                      ...+.+.+.+.+.-+.. ++-++.|+-+    +             .-.+-..++.+...+-+....++.+|++.|+...
T Consensus       287 ~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~  366 (498)
T KOG0637         287 VTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYW  366 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             99999999999999988860457657899999526689988743442358999988999999999999997448645884


Q ss_pred             HHHH
Q ss_conf             8877
Q gi|254780967|r  277 YSLL  280 (398)
Q Consensus       277 ~~~~  280 (398)
                      .+..
T Consensus       367 ~~~~  370 (498)
T KOG0637         367 GGVN  370 (498)
T ss_pred             EHHH
T ss_conf             1567


No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein; InterPro: IPR000849   Proteins in this group are involved in the transport system that mediates the uptake of a number of sugar phosphates as well as the regulatory components that are responsible for induction of this transport system by external glucose 6-phosphate. In Escherichia coli its role in transmembrane signalling may involve sugar-phosphate-binding sites and transmembrane orientations similar to those of the transport protein . The following proteins in this entry, involved in the uptake of phosphorylated metabolites, are evolutionary related , :  E. coli, Bacillus subtilis and Haemophilus influenzae glycerol-3- phosphate transporter (gene glpT). Salmonella typhimurium phosphoglycerate transporter (gene pgtP). E. coli and S. typhimurium hexose-6-phosphate transporter (gene uhpT). E. coli and S. typhimurium protein uhpC. UhpC is necessary for the expression of uhpT and seems to act jointly with the uhpB sensor/kinase protein. Human glucose 6-phosphate translocase .    These proteins of about 50 kDa apparently contain 12 transmembrane regions.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.89  E-value=5.2e-08  Score=60.68  Aligned_cols=132  Identities=14%  Similarity=0.114  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf             888765455431531-1015889988657677889999985001565124688778889999999987325777640379
Q gi|254780967|r  227 VNSSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIF  305 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (398)
                      ....|. +++..+++ ++.|+..+...+...++.++.|.++||.+.|.....++....++...+   ........+++.+
T Consensus        15 ~~a~P~-l~E~~~L~~~dlG~~~s~~~i~Yg~sK~~~G~~sDr~~~r~fl~~GL~l~a~v~~~~---gfs~watS~l~~~   90 (404)
T TIGR00881        15 ALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGMVSDRSNPRVFLAIGLILCAIVNIFF---GFSTWATSSLWVM   90 (404)
T ss_pred             HHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HHHCCHHHHHHHH
T ss_conf             988899-886228887578899999999998746775665326764899999999999999998---8522357899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             989989999999999999999985346-676999999999999999999999999983
Q gi|254780967|r  306 IAFFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ..+.++.|+..|.-.|+......+=+| ++||+..|+.|..++++|++.+|++.....
T Consensus        91 ~~l~~l~G~fQG~G~P~~~r~~~~W~~~~eRGt~~~~wn~~~nvGG~~~pp~~~~~~~  148 (404)
T TIGR00881        91 AALMALNGLFQGMGWPPCGRLLTKWFSRSERGTWVAIWNISHNVGGGLLPPLVLFGIA  148 (404)
T ss_pred             HHHHHHHHHHHHHCCCHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999887750675212402321576531126677888988757899999999999


No 171
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812   The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.88  E-value=1.8e-06  Score=52.17  Aligned_cols=170  Identities=14%  Similarity=0.141  Sum_probs=100.7

Q ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             76310014688876545543153110158899886576778899999850015651246887788899999999873257
Q gi|254780967|r  218 LTMGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSN  297 (398)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (398)
                      +.....-.|+...|.+-.+..-.........+....+..+|.++.|+++|++|||++...+..++.+....+....    
T Consensus        16 L~pl~~DMYLPa~p~i~~~L~~~as~vQ~tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~Sl~~~~~~----   91 (400)
T TIGR00710        16 LGPLGIDMYLPAFPEIAKDLSVSASLVQLTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALSSLGLALSN----   91 (400)
T ss_pred             HCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH----
T ss_conf             3202112521207898986287866899999999999999898652333203672388999999999999999985----


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHH-HHHHH-HHHH
Q ss_conf             77640379989989999999999999999985346-6-76999999999999999999999999--983-11799-9999
Q gi|254780967|r  298 HPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFS-H-LAGTASSIFGFINTVISTILGIIIGQ--SFN-GTTYP-ITIG  371 (398)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~G~a~~l~~~~~~~~~~~~~~~~g~--~~~-~~~~~-~~~~  371 (398)
                         +.-.+...=++-+++.+......++...|.++ + +.....|.....- ......+|++|.  +.+ .-.|. ..+.
T Consensus        92 ---ni~~L~~lRF~Qa~gasA~~V~~~AlvRD~Y~G~~e~s~~~s~l~~~~-~~~P~~aP~~Ggai~~~~~l~WhaIF~~  167 (400)
T TIGR00710        92 ---NIETLLVLRFLQAFGASAALVISQALVRDIYPGREELSKIYSILMLVL-ALAPAVAPLIGGAIYVLVFLSWHAIFAV  167 (400)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ---199999999999999989999999888502032578999999999999-9998788888699999985209999999


Q ss_pred             HHHHHHHH-HHHHHHHHCCHHHHHH
Q ss_conf             99999999-9999999422000343
Q gi|254780967|r  372 FFGIAVSS-FICILIVEKNQMFRKT  395 (398)
Q Consensus       372 ~~~~~~~~-~~~~~~~~~~~~~r~~  395 (398)
                      +...++.. ...+.+.++.+.+||.
T Consensus       168 L~l~~~~l~a~~f~~~pET~~~~~r  192 (400)
T TIGR00710       168 LSLIGILLSALIFFLLPETLPKEKR  192 (400)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHCC
T ss_conf             9999999999999855122740103


No 172
>KOG3762 consensus
Probab=98.86  E-value=1.8e-09  Score=68.67  Aligned_cols=72  Identities=21%  Similarity=0.347  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHCCCC
Q ss_conf             76699999999998199988999999999999999999999999865082899-99999999999998510011
Q gi|254780967|r   18 IDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIV-MMFGLVIHIISTFIMVTINS   90 (398)
Q Consensus        18 ~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~-l~~g~~~~~i~~~~~~~a~~   90 (398)
                      .+...|.++.+.+++|.+++++|.++.+..++ ..++.|++|.++||+-+||. ++.+++.....+++..+.+-
T Consensus        27 ~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v-~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv~P   99 (618)
T KOG3762          27 FGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLV-EFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFVPP   99 (618)
T ss_pred             CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCC
T ss_conf             45121678889987199877865444088899-99867777899999874284447989999999883464167


No 173
>pfam06779 DUF1228 Protein of unknown function (DUF1228). This family represents the N-terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many family members are hypothetical proteins.
Probab=98.85  E-value=2.8e-08  Score=62.19  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             99886576699999999998199988999999999999999999999999865082899999999999999985100110
Q gi|254780967|r   12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF   91 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~   91 (398)
                      .++.+   .|.|.+|.|++|.+.|.++.+ ++-|...+||-+|.+...++.+|.++|+++..++....+..+.+++.+|+
T Consensus         5 GigRF---aYTpiLP~M~~~~~ls~~~ag-~lasaNy~GYL~GAl~a~~~~~~~~~~~~~~~gl~~~~~~~~~m~~t~~f   80 (85)
T pfam06779         5 GIGRF---SYTPILPGMMAEGQFSLSDAG-WIASANYAGYLVGALLASFGWSHGRERRVLLGGLLATVLLLAAMALTNGF   80 (85)
T ss_pred             HHHHH---HHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             56999---997561899984599888899-99999999999999999998850258999999999999999999834674


Q ss_pred             HHHC
Q ss_conf             1110
Q gi|254780967|r   92 TGML   95 (398)
Q Consensus        92 ~~l~   95 (398)
                      ..+.
T Consensus        81 ~~~~   84 (85)
T pfam06779        81 AAVS   84 (85)
T ss_pred             EEEE
T ss_conf             1012


No 174
>KOG3574 consensus
Probab=98.82  E-value=4e-07  Score=55.78  Aligned_cols=331  Identities=11%  Similarity=0.064  Sum_probs=140.1

Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCCHHHHHH-HHHHHHHHHHHHHC----------
Q ss_conf             9999999819998899999999999999999999999986-----5082899999-99999999998510----------
Q gi|254780967|r   24 CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSD-----RFGRKIVMMF-GLVIHIISTFIMVT----------   87 (398)
Q Consensus        24 ~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~D-----r~Grr~~l~~-g~~~~~i~~~~~~~----------   87 (398)
                      ++|.+-+.=|+|..+++.  .|.-...+.+ .+.+.++.|     |+||||.-++ +..+.+..+...+.          
T Consensus        52 ~iP~lL~ak~vSyt~~a~--fS~ay~P~sL-KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng  128 (510)
T KOG3574          52 AIPLLLQAKGVSYTSQAI--FSFAYWPFSL-KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNG  128 (510)
T ss_pred             HHHHHHCCCCCCHHHHHH--HHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             327873179965012212--3333438889-9887755678887751555101311699999999998607985546689


Q ss_pred             -CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC------CCCCCC--
Q ss_conf             -01101110022321001111111000123321000111122122331000111111111122221------111110--
Q gi|254780967|r   88 -INSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVA------LSGGWI--  158 (398)
Q Consensus        88 -a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~------~~~gWr--  158 (398)
                       .+|...+...-++.-+..+.-..+.....-.+.++++.+-+..-...+...|..++-.+--.+..      ...+|.  
T Consensus       129 ~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~  208 (510)
T KOG3574         129 GLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLD  208 (510)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCC
T ss_conf             88306899999999999875434434588887428864684357889887563886250025744866666787448574


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHHCCCCCCH-HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             -------145678888877778887616788640-221011111123331000000000256777887631001468887
Q gi|254780967|r  159 -------GIFVCMGVITTFITLWYYIRFPETLDP-RDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSS  230 (398)
Q Consensus       159 -------~~f~~~~~~~~~~~~~~~~~~pet~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (398)
                             .-.++-+.+..+...+..+.-+|.... .++...+.....+-.+++++-|.......+....-.++-+--...
T Consensus       209 ~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t  288 (510)
T KOG3574         209 QGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALT  288 (510)
T ss_pred             CCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             66687457999999999999999999647985332034304888999999999838207888889988788775642110


Q ss_pred             HHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHH--HH--HHHHHHHHHHHHHHHCCCC-----
Q ss_conf             65455431531-101588998865767788999998500156--512468--87--7888999999998732577-----
Q gi|254780967|r  231 QQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGI--RRVSHY--SL--LIFFMITGSWLLVQITSNH-----  298 (398)
Q Consensus       231 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~--~~~~~~--~~--~~~~~~~~~~~~~~~~~~~-----  298 (398)
                      +.-+.|. +.+ +..+.    ..+....-++..+.+..|+..  |++...  +.  -+....... .+....+..     
T Consensus       289 ~LkLle~-Gv~ke~Lal----~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t-~Lv~~~~~~~~~~G  362 (510)
T KOG3574         289 SLKLLEH-GVPKEELAL----IAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQT-ALVWWTPTLGHSDG  362 (510)
T ss_pred             CHHHHHC-CCCHHHHEE----EEEEHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCCC
T ss_conf             0688874-997567004----42000028876646512202788731378874059999888777-78763132466788


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             764037998998999999999999999----99853466769999999999999999999999999831
Q gi|254780967|r  299 PIHLLIFIAFFFLASFQFGLINSNFSS----ISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNG  363 (398)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~  363 (398)
                      .......+.......+...+......+    .+.-..|+.-|+-+.+.|+..+.+|..-+.++.++.|.
T Consensus       363 ~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~  431 (510)
T KOG3574         363 TFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG  431 (510)
T ss_pred             CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC
T ss_conf             543014899999999865678999999888871048831272189999999873487488899985154


No 175
>TIGR00900 2A0121 H+ Antiporter protein; InterPro: IPR004751   Drug antiporters which use the proton motive force for the active efflux of the drug .; GO: 0016021 integral to membrane.
Probab=98.82  E-value=6.8e-09  Score=65.56  Aligned_cols=117  Identities=11%  Similarity=0.163  Sum_probs=53.2

Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHH
Q ss_conf             554315311015889988657677889999985001565124688778889999999987325-7776403799899899
Q gi|254780967|r  234 YVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITS-NHPIHLLIFIAFFFLA  312 (398)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  312 (398)
                      ..+..+.+...+.......+...+.+++.|-+.||+++|++....=.+..............+ .....++...+..++.
T Consensus        28 vl~~~g~~~~l~la~~~~~~p~~~~~piaG~~~DR~~Rk~~~~~~Dlirav~~~~l~~~~~~~Gvd~l~~~~~~v~~~i~  107 (387)
T TIGR00900        28 VLAGTGSASVLSLAALAGLLPYVVLSPIAGVLVDRYDRKKVMIGADLIRAVLVAVLPFVALLGGVDVLEIWMVYVVAFIL  107 (387)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             98504766689999999887641430330023115771166788889999999999999984650123499999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999985346-6--76999999999999999
Q gi|254780967|r  313 SFQFGLINSNFSSISMEPFS-H--LAGTASSIFGFINTVIS  350 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~-~--~~G~a~~l~~~~~~~~~  350 (398)
                      +....+..|..++...+..| |  +--.++|+....+....
T Consensus       108 ~~~~~Ff~pa~~a~~P~~vp~e~W~l~~Ans~~~~~~~~~~  148 (387)
T TIGR00900       108 AIAQAFFTPAYQAMLPDLVPEEKWQLTRANSLSQLVRSLFY  148 (387)
T ss_pred             HHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             97764213022200200021123479999879999999988


No 176
>TIGR00897 2A0118 polyol permease; InterPro: IPR004748   Proteins in this entry are mostly known or predicted polyol transporters. The best characterised of these proteins are DalT and RbtT from Klebsiella pneumoniae, which tranpsort D-arabinatol and ribotol respectively. Like other members of the Major Facilitator Superfamily (MFS), DalT and RbtT appear to be secondary transporters capable only of transporting solutes in response to chemiosmotic ion gradients . They contain a total of twelve predicted transmembrane helices; six in the N-terminal portion of the protein, and six in the C-terminal portion. Residues defining substrate specificity lie in the N-terminal region of these proteins.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.82  E-value=3.6e-09  Score=67.08  Aligned_cols=158  Identities=21%  Similarity=0.286  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHCCC-
Q ss_conf             99886576699999999998199988999999999999999999999999865082899-9999999999999851001-
Q gi|254780967|r   12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIV-MMFGLVIHIISTFIMVTIN-   89 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~-l~~g~~~~~i~~~~~~~a~-   89 (398)
                      .++.++..+++|.  ...+++|.|.++=-| +-...+++..+..+++|.+.||+|=||+ +=.|.+.+++.++..-+.| 
T Consensus       243 ~ig~fGFavflPm--m~~a~~G~StseWLQ-iWg~~Ff~nIvfN~ifGivGdKlGW~~~V~WFGgvG~giftlalYY~P~  319 (411)
T TIGR00897       243 TIGLFGFAVFLPM--MFLAELGFSTSEWLQ-IWGTLFFTNIVFNVIFGIVGDKLGWKNTVIWFGGVGCGIFTLALYYIPQ  319 (411)
T ss_pred             HHHHCCHHHHHHH--HHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf             1322134676358--999763874025899-9999999999999999754144687316676376458999999986566


Q ss_pred             ----CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             ----1011100223210011111110001233210001111221223310001111111111222211111101456788
Q gi|254780967|r   90 ----SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMG  165 (398)
Q Consensus        90 ----~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~  165 (398)
                          ++++..+--+..|...++..|.+ |++.... ||+++.++|.++.+.++..-++|.+...++.. .|=+.+-++.+
T Consensus       320 ~~Ghs~av~~iia~~~G~~lAgyVPl~-A~~Ptla-pk~KGAA~SVlNL~aGlsaF~aPaia~lfig~-~ga~GVv~ifa  396 (411)
T TIGR00897       320 FIGHSFAVVLIIAIIYGILLAGYVPLA-AVLPTLA-PKDKGAAMSVLNLSAGLSAFVAPAIAVLFIGL-LGAIGVVWIFA  396 (411)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHH
T ss_conf             522589999999999999998663488-7422348-99873156488888628878889999999850-02027999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             8887777888
Q gi|254780967|r  166 VITTFITLWY  175 (398)
Q Consensus       166 ~~~~~~~~~~  175 (398)
                      .+-+....++
T Consensus       397 ALY~~safLt  406 (411)
T TIGR00897       397 ALYLVSAFLT  406 (411)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999998


No 177
>KOG3764 consensus
Probab=98.81  E-value=1.6e-09  Score=68.95  Aligned_cols=140  Identities=11%  Similarity=0.156  Sum_probs=69.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             11015889988657677889999985001565124688778889999999987325777640379989989999999999
Q gi|254780967|r  241 GNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLIN  320 (398)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (398)
                      ....++.++..++...+.+.+.|.+.||+|.|-....++.+.......+.+.   .    ........-.+-+.+.+...
T Consensus       105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg---~----sy~~l~vAR~LQgvgsA~~~  177 (464)
T KOG3764         105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG---N----SYPMLFVARSLQGVGSAFAD  177 (464)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC---C----HHHHHHHHHHHHHHHHHHHH
T ss_conf             2002378999999999745442156777356427999999999999999870---5----10789999998644388887


Q ss_pred             HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999853466--769999999999999999999999-999831--1799999999999999999999942
Q gi|254780967|r  321 SNFSSISMEPFSH--LAGTASSIFGFINTVISTILGIII-GQSFNG--TTYPITIGFFGIAVSSFICILIVEK  388 (398)
Q Consensus       321 ~~~~~~~~~~~~~--~~G~a~~l~~~~~~~~~~~~~~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  388 (398)
                      ....+...+.+|+  +||++++..-..- ..|.+.+|.. |.+++-  ...|+.+....+.+-..+.++....
T Consensus       178 tsglamlAd~f~~d~er~~vmGialgfi-slG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p  249 (464)
T KOG3764         178 TSGLAMLADVFPEDNERGSVMGIALGFI-SLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP  249 (464)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHH-HCCCEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHEECC
T ss_conf             5338999987155304447899999987-50332158744005764487574899999999999999865583


No 178
>KOG4686 consensus
Probab=98.80  E-value=2.6e-08  Score=62.36  Aligned_cols=98  Identities=11%  Similarity=0.041  Sum_probs=47.7

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCCEECCC
Q ss_conf             9865082899999999999999985100110111002232100111111100012332100011112-212233100011
Q gi|254780967|r   61 LSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAK-VLSIAMMIFMIM  139 (398)
Q Consensus        61 l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~-~~~~~~~~~~~g  139 (398)
                      +.||-|||.--+.+..  ...+.-.+.++-+-.+. ...+.|+|.=.++-.--++-.|.-.+.+... .+.++....+.-
T Consensus        15 ~i~~a~r~~~~~~~~~--~~~c~PS~l~hr~m~lv-~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwP   91 (459)
T KOG4686          15 LILRAGRRDNELFSFY--FVYCIPSALGHRFMALV-FMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWP   91 (459)
T ss_pred             CCCCCCCCCCCCCCCC--CEEECCHHHHHHHHHHH-HHHHHCCCCEEECCCCHHHHHHHHCCCCCCEEEEEEEEEECCCC
T ss_conf             7600145774445552--01216166666899999-99983466412247804665553046653413324544322178


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             1111111122221111110145
Q gi|254780967|r  140 PILAPSIGQATVALSGGWIGIF  161 (398)
Q Consensus       140 ~~igp~ig~~l~~~~~gWr~~f  161 (398)
                      .++-+..||++++...|-|+.-
T Consensus        92 NvVlcffgGflidr~fgir~gt  113 (459)
T KOG4686          92 NVVLCFFGGFLIDRRFGIRLGT  113 (459)
T ss_pred             CEEEEEECCEEEHHHHHHHHHH
T ss_conf             7777654112110123034778


No 179
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2; InterPro: IPR005988    SV2 proteins are abundant synaptic vesicle proteins expressed in two major (SV2A and SV2B) and one minor isoform (SV2C) that resemble transporter proteins. SV2B knockout mice are phenotypically normal while SV2A- and SV2A/SV2B double knockout mice exhibit severe seizures and die postnatally. Without SV2 proteins, presynaptic Ca^2+ accumulation during consecutive action potentials causes abnormal increases in neurotransmitter release that destabilize synaptic circuits and induce epilepsy . ; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=98.80  E-value=6.8e-10  Score=71.04  Aligned_cols=157  Identities=20%  Similarity=0.312  Sum_probs=125.1

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
Q ss_conf             99999999819998899999999999999999999999986508289999999999999998510011011100223210
Q gi|254780967|r   23 PCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQG  102 (398)
Q Consensus        23 p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G  102 (398)
                      -.+|.-.+|+-+++...+ ++-....++..++..++|-++||.|||..++++...-........+.+.+..++.+|.+.|
T Consensus       188 ~~~p~~~~~~c~~~~~~g-~~g~~~~~g~~~g~~~wgg~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~c~~~~g  266 (742)
T TIGR01299       188 FVLPSAEKDLCLPDSGKG-WLGLIVYLGLLVGAFLWGGLADKLGRKQCLLICLSVNGFFAFLSSFVQGYGFFLLCRLLSG  266 (742)
T ss_pred             EECCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             110444332202467763-2578888888887765210233204300023321012578888877543247887887622


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC-------------CCCHHHHHHHHHHH
Q ss_conf             01111111000123321000111122122331000111111111122221111-------------11014567888887
Q gi|254780967|r  103 IGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSG-------------GWIGIFVCMGVITT  169 (398)
Q Consensus       103 ~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~-------------gWr~~f~~~~~~~~  169 (398)
                      +|.+...|....+.++....++|+..+++.-..+.+|.+.+......++ .++             .||. |.+...+..
T Consensus       267 ~g~gg~~p~~~~~~~~~~~~~~~g~~~~w~c~~w~~gg~~~~~~~w~~~-p~~gw~~~~g~~~~~~~w~~-~~~~c~~p~  344 (742)
T TIGR01299       267 FGIGGAIPTVFSYFAEFLAREKRGEHLSWLCLFWLIGGVYAAALAWAII-PHYGWSFSLGSAYQFHSWRV-FVLVCALPC  344 (742)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCHH-HHHHHHHHH
T ss_conf             5666304688888888875420353256787888753466665554431-02453212454200011001-023244334


Q ss_pred             HHHHHHHHHCCCC
Q ss_conf             7778887616788
Q gi|254780967|r  170 FITLWYYIRFPET  182 (398)
Q Consensus       170 ~~~~~~~~~~pet  182 (398)
                      +..+......||+
T Consensus       345 ~~~~~~~~~~p~~  357 (742)
T TIGR01299       345 VFAVGALTFQPES  357 (742)
T ss_pred             HHHHHHHHCCCCC
T ss_conf             5554432115666


No 180
>pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.
Probab=98.72  E-value=1.3e-06  Score=53.04  Aligned_cols=18  Identities=17%  Similarity=0.207  Sum_probs=8.8

Q ss_pred             HHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999999422
Q gi|254780967|r  372 FFGIAVSSFICILIVEKN  389 (398)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~  389 (398)
                      ....+.+++++.++++..
T Consensus       539 si~fg~i~iiaalf~~d~  556 (598)
T pfam06609       539 AMALGVIPIIASLCMRDF  556 (598)
T ss_pred             HHHHHHHHHHHHHHCCCC
T ss_conf             999999999999981895


No 181
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747   This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.71  E-value=8.2e-08  Score=59.60  Aligned_cols=23  Identities=4%  Similarity=0.203  Sum_probs=8.8

Q ss_pred             CCCCCCCCCEECCCCCCCCCCCC
Q ss_conf             12212233100011111111112
Q gi|254780967|r  126 AKVLSIAMMIFMIMPILAPSIGQ  148 (398)
Q Consensus       126 ~~~~~~~~~~~~~g~~igp~ig~  148 (398)
                      .+..+.....++.....+..+++
T Consensus       118 p~~~g~m~GlYs~al~~gaaLaa  140 (372)
T TIGR00896       118 PERVGLMTGLYSMALALGAALAA  140 (372)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             55430467899999998876661


No 182
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.68  E-value=3.6e-06  Score=50.51  Aligned_cols=72  Identities=11%  Similarity=0.189  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             86576699999999998-1999889999999999----9999999999999986508289999999999999998510
Q gi|254780967|r   15 SLGIDIILPCLPKISDS-LHLSNENYGQHLISFY----LIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT   87 (398)
Q Consensus        15 ~~~~~~~~p~lp~i~~~-l~~s~~~~~~~~~s~~----~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~   87 (398)
                      .++...+-|....+-.| ++-++.... -..+.|    -+|..++.++.|.+.+++|-+..+..+.+...++.+...+
T Consensus       123 ~vG~G~~KpnisslvG~lY~~~d~rrD-~~FtiFYmgINiGafla~ll~g~l~~~~G~~~gF~~a~igM~igli~f~~  199 (500)
T PRK09584        123 AVGNGLFKANPSSLLSTCYEKDDPRLD-GAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAF  199 (500)
T ss_pred             HHCCCCCCCCHHHHHHHCCCCCCHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             955534676577888760589963322-44228999998999999999999998736167899899999999999999


No 183
>TIGR00901 2A0125 AmpG-related permease; InterPro: IPR004752 The signal transducer encoded by ampG is essential for induction of chromosomal AmpC beta-lactamase in Escherichia coli by beta-lactam antibiotics and 'unspecific' inducers . The ampG protein probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling..
Probab=98.68  E-value=1.1e-05  Score=47.87  Aligned_cols=157  Identities=18%  Similarity=0.245  Sum_probs=113.5

Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----C----CHHH-HHHHHHHHHHHHHHHHCCC----
Q ss_conf             999999981999889999999999999999999999998650-----8----2899-9999999999999851001----
Q gi|254780967|r   24 CLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-----G----RKIV-MMFGLVIHIISTFIMVTIN----   89 (398)
Q Consensus        24 ~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-----G----rr~~-l~~g~~~~~i~~~~~~~a~----   89 (398)
                      .+|..-++=|+|..+.|  ..|.-...|.+ .++|.|+.|+|     |    |||. ++.+........+..++-+    
T Consensus        10 ~lp~wL~~~~v~~~~iG--~~S~~~lpYsl-KfLWsPl~D~~~~~~~G~~~GRRrsWl~~tq~~L~~~l~~~s~~~P~~~   86 (531)
T TIGR00901        10 TLPVWLRSKNVSLKTIG--FFSLVGLPYSL-KFLWSPLLDTYYLPFLGKLLGRRRSWLVLTQVLLLLLLLILSFLDPRLL   86 (531)
T ss_pred             HHHHHHHHCCCCHHHHH--HHHHHHHHHHH-HHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             28877402067888999--99999999999-9997201362245636641453046899999999999999972286200


Q ss_pred             --------CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-----
Q ss_conf             --------1011100223210011111110001233210001111221223310001111111111222211111-----
Q gi|254780967|r   90 --------SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-----  156 (398)
Q Consensus        90 --------~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-----  156 (398)
                              +..++...-++..+.++.-..+-.++-.|+.++||++-+.+....+..+|..++..+. ..++....     
T Consensus        87 ~~tDD~~~~l~~l~~~a~L~~F~SAtQDI~~DA~r~~il~~e~lG~~s~~~~~Gyr~g~Ll~~~l~-L~La~~~~~n~~~  165 (531)
T TIGR00901        87 SKTDDRSTDLPLLAGLAFLIAFFSATQDIVLDAWRLEILSDEELGYGSTIYIVGYRVGMLLAGSLA-LVLASALFANKYL  165 (531)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH
T ss_conf             036788742999999999999985425578774666216845567889999999999999887999-9997476403000


Q ss_pred             ------------CCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             ------------1014567888887777888761678864
Q gi|254780967|r  157 ------------WIGIFVCMGVITTFITLWYYIRFPETLD  184 (398)
Q Consensus       157 ------------Wr~~f~~~~~~~~~~~~~~~~~~pet~~  184 (398)
                                  |..+|+....+-+...+...+..+|+..
T Consensus       166 R~~P~~~~~~~lw~~~f~~~~l~~l~~~~~~lFL~~E~~~  205 (531)
T TIGR00901       166 RFIPSNEGLVTLWGVIFVWTALLLLPGLLVTLFLAKEPQE  205 (531)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             0488547999999999999999999999988730247864


No 184
>pfam02487 CLN3 CLN3 protein. This is a family of proteins from the CLN3 gene. A missense mutation of glutamic acid (E) to lysine (K) at position 295 in the human protein has been implicated in Juvenile neuronal ceroid lipofuscinosis (Batten disease).
Probab=98.63  E-value=4e-06  Score=50.30  Aligned_cols=130  Identities=12%  Similarity=0.033  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             99999999999999998650828999999999999999851001101110022321001111111000123321000111
Q gi|254780967|r   46 FYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDM  125 (398)
Q Consensus        46 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~  125 (398)
                      +..+...+..+..-...+|+..+.=+.....+.+++.++.+++++++.-+++-++.+++.|.....-.++.+ .++++  
T Consensus        62 Adi~P~l~~kl~aP~fi~~vpy~~Ri~~~~~ls~~g~l~Va~s~~~~~~L~GVvlas~ssg~GE~tfL~lt~-~y~~~--  138 (409)
T pfam02487        62 ADILPSLIIKLTAPFFIHRFPFGFRVWIVILLQASSFFLVAFSKSIAMSLAGVVFASIGSGLGEITFLALTA-HYPRI--  138 (409)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHH-HCCHH--
T ss_conf             767889999998677333178309999999998612689998361899999999886331302999999985-45714--


Q ss_pred             CCCCCCCCCEECCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             12212233100011111111112222111--111014567888887777888761678
Q gi|254780967|r  126 AKVLSIAMMIFMIMPILAPSIGQATVALS--GGWIGIFVCMGVITTFITLWYYIRFPE  181 (398)
Q Consensus       126 ~~~~~~~~~~~~~g~~igp~ig~~l~~~~--~gWr~~f~~~~~~~~~~~~~~~~~~pe  181 (398)
                        .++-++.+.+.+.++|+..-.. ++..  .+-|..+.+...+..+..+..++.+|+
T Consensus       139 --~lsawsSGTG~AGl~Gs~~Y~~-lT~~~~ls~~~tlL~~~~lp~i~~~~yf~~L~~  193 (409)
T pfam02487       139 --VIAGWSSGTGGAGLIGAFSYAF-LTQIAGLSPKHTLLVMLFIPALFAFSYFFLLTS  193 (409)
T ss_pred             --HHHHCCCCCCCHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             --5430035667156777889998-873327689999999998899999999997078


No 185
>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734   Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=98.63  E-value=9.5e-06  Score=48.21  Aligned_cols=112  Identities=18%  Similarity=0.227  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88998865767788999998500156512468877888999999998732577764037998998999999999999999
Q gi|254780967|r  246 IAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSS  325 (398)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                      ......+++-.+.+++++.+.||+|||++...+..+..+....+.+   ... +.+...+.+.-++.+++.+...+...+
T Consensus         2 ~~~~~yAl~q~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al---~nP-h~~~~~L~i~R~~~G~~~~~~~~~g~a   77 (148)
T TIGR00880         2 LLVAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFAL---SNP-HSNITVLIISRFLQGFGAAAALVAGAA   77 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH---CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7999999999999999999884216289999999999999999884---487-237999999999999988899998988


Q ss_pred             HHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9985346-6-76999999999999999999999999983
Q gi|254780967|r  326 ISMEPFS-H-LAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       326 ~~~~~~~-~-~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ...|-.+ | +++.+.++.... ...+.+.+|.+|...+
T Consensus        78 ~~aD~~~~~~~~~~a~g~~~~~-~~~g~~lgP~~G~~~~  115 (148)
T TIGR00880        78 LIADIYPPEEERSVALGLMSAG-IALGPILGPPLGGVLA  115 (148)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf             8877426404788999999999-9999999999989998


No 186
>TIGR00886 2A0108 nitrite transporter; InterPro: IPR004737    This family represents nitrate/nitrite antiporters in bacteria, fungi, algae and marine diatoms. Nitrate transporters in Escherichia coli are involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. NarK is polytopic membrane protein with 12 transmembrane domains which is involved in nitrate uptake and nitrite excretion and is thought to function as a nitrate/nitrite antiporter. At low concentrations of nitrate, NarK mediates the electrogenic excretion of nitrite rather than nitrate/nitrite exchange. This process prevents intracellular accumulation of toxic levels of nitrite and allows further detoxification in the periplasm through the action of nitrite reductase .   In the opportunistic fungal pathogen Aspergillus fumigatus the nitrate transporter crnA clusters with nitrite reductase (niiA) and nitrate reductase (niaD). NiaD, niiA and crnA are induced by nitrate and repressed by ammonium at the transcriptional level . In Hebeloma cylindrosporum the nitrate transporter polypeptide (NRT2) is characterised by 12 transmembrane domains and presents both a long putative intracellular loop and a short C-terminal tail, two structural features which distinguish fungal high-affinity transporters from their plant homologues. Transcription is repressed by ammonium and strongly stimulated by nitrate but also by organic nitrogen or nitrogen deficiency.  ; GO: 0015103 inorganic anion transmembrane transporter activity, 0015698 inorganic anion transport, 0016021 integral to membrane.
Probab=98.61  E-value=1.7e-05  Score=46.77  Aligned_cols=58  Identities=19%  Similarity=0.272  Sum_probs=31.4

Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             45543153110158899886576778899999850015651246887788899999999
Q gi|254780967|r  233 IYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLL  291 (398)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~  291 (398)
                      +..+.-+.....++.-.++.+.-..|+.+++++.+|++.|- .........+..+...+
T Consensus       334 fg~~~~~aG~~a~~~~~~g~~~RP~GG~lsD~~gg~~g~~a-r~~~~~~~~~~~g~~~~  391 (472)
T TIGR00886       334 FGLSKVQAGAYASLGGLLGLLARPLGGLLSDRLGGRFGTRA-RKLLMSFLGVAMGAALV  391 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHHHHHH
T ss_conf             99887339999999998988863766689987268668249-99999999999987655


No 187
>TIGR00898 2A0119 cation transport protein; InterPro: IPR004749 Organic cation transport proteins belong to this group. The protein from human is a sodium-dependent, high affinity carnitine transporter that also transports organic cations without the involvement of sodium. It is involved in the active cellular uptake of carnitine.; GO: 0015075 ion transmembrane transporter activity, 0006811 ion transport, 0016021 integral to membrane.
Probab=98.55  E-value=7.2e-07  Score=54.38  Aligned_cols=116  Identities=12%  Similarity=0.095  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             58899886576778899999850015651246887788899999999873257776403799899899999999999999
Q gi|254780967|r  245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFS  324 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (398)
                      .+..+...+|..+|+.+.|.++||+|||+.................       ..+.+.++.++-++.|++.+-......
T Consensus       143 ~L~~s~~~~G~L~Gs~~~G~lsDrfGRk~~L~~s~l~~~~~g~~~a-------~SP~~~~~~vfR~L~G~~~~g~~~~~~  215 (557)
T TIGR00898       143 DLTQSLFFVGVLLGSLVLGYLSDRFGRKKVLLLSTLVTAVSGVLTA-------FSPNYTVFLVFRLLVGMGIAGIWVVAV  215 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_conf             6889999999998688887786352048999999999988786512-------756899999999996131002025777


Q ss_pred             HHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99985346-6769999999-99999999999999999983117999
Q gi|254780967|r  325 SISMEPFS-HLAGTASSIF-GFINTVISTILGIIIGQSFNGTTYPI  368 (398)
Q Consensus       325 ~~~~~~~~-~~~G~a~~l~-~~~~~~~~~~~~~~~g~~~~~~~~~~  368 (398)
                      .+..|-.| +.|.... +. ....+..|.+.=+.++++..++.|-+
T Consensus       216 ~L~~E~~~~~~R~~~~-~lG~~~~~~~G~~~L~l~AY~~~~SgWR~  260 (557)
T TIGR00898       216 VLNTEFLPKKQRAIVG-ILGIQVFFSLGLLLLPLVAYFIPDSGWRW  260 (557)
T ss_pred             EEEEEECCCCCCEEEE-EEHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             7677532736615766-10358888876999877886537855899


No 188
>pfam03219 TLC TLC ATP/ADP transporter.
Probab=98.52  E-value=3.6e-05  Score=45.04  Aligned_cols=267  Identities=14%  Similarity=0.161  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             999999999988657669999999999819998--899999999999999-99999999998650828999999999999
Q gi|254780967|r    4 VIVIAMLMAINSLGIDIILPCLPKISDSLHLSN--ENYGQHLISFYLIGY-GIAQIFYGPLSDRFGRKIVMMFGLVIHII   80 (398)
Q Consensus         4 i~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~--~~~~~~~~s~~~~~~-~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i   80 (398)
                      .+.++.++.+..+..+.    +-.+.|.+=++.  +++-..+-....+.. .+.......+++|++|++++-.-+..+..
T Consensus        26 f~~m~lmff~i~f~y~~----lR~~KD~lvv~~~gae~IpflK~~~vlP~a~~~~~~y~kl~n~~~~~klFy~~~~~Fl~  101 (491)
T pfam03219        26 FLPMALMMFCILFNYNI----LRDIKDSLVVTAIGAEVIPFLKVWGVLPSAILFTIIYAKLSNRLSREKVFYIIISFFLV  101 (491)
T ss_pred             HHHHHHHHHHHHHHHHH----HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             99999999999999999----98600207872588499999999999899999999999997527775789999999999


Q ss_pred             HHHHHHCC--CCHHHH-----------------------------CCCCCCCCCCCCC-CCCCCHHHHHHHHCCCCCCCC
Q ss_conf             99985100--110111-----------------------------0022321001111-111000123321000111122
Q gi|254780967|r   81 STFIMVTI--NSFTGM-----------------------------LCMRLIQGIGGAA-PRIITISIIRDIYDGRDMAKV  128 (398)
Q Consensus        81 ~~~~~~~a--~~~~~l-----------------------------~~~r~l~G~g~~~-~~~~~~a~i~~~~~~~~~~~~  128 (398)
                      .-.+.++.  ||-..+                             ....+..-+-++. ....-....+|.++.+|..|.
T Consensus       102 ff~lf~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~W~~slfYv~aElWgsvvlslLFW~fANeitt~~eAKRf  181 (491)
T pfam03219       102 FFALFAFVLYPNRDILHPNPEADKLLSILPPGFKWFIAMVRNWSYSLFYIMAELWGSVVLSLLFWQFANQITTVEEAKRF  181 (491)
T ss_pred             HHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             99999999926487519877999887325304799999998888999999999989999999999999850799999899


Q ss_pred             CCCCCCEECCCCCCCCCCCCCCCCC--------CCCCCHHHHH----HHHHHHHHHHHHHHHCC-----CCCCH----HH
Q ss_conf             1223310001111111111222211--------1111014567----88888777788876167-----88640----22
Q gi|254780967|r  129 LSIAMMIFMIMPILAPSIGQATVAL--------SGGWIGIFVC----MGVITTFITLWYYIRFP-----ETLDP----RD  187 (398)
Q Consensus       129 ~~~~~~~~~~g~~igp~ig~~l~~~--------~~gWr~~f~~----~~~~~~~~~~~~~~~~p-----et~~~----~~  187 (398)
                      .++...+.+++.++++.+...+...        ...|+...-.    ..+.++++ +..+..+.     ++...    ++
T Consensus       182 yplf~~gan~~li~sG~~~~~~s~~~~~~~~~~~~~~~~~l~~l~~~v~~~giii-~~l~~~l~~~vl~~~~~~~~~~k~  260 (491)
T pfam03219       182 YPLFGLGGNLALIISGQIIVYLSNLIRKALPSGVDSWEVSLKYLMSIVVLSGIII-ILLYRWINKNVLTDPRLYASAKKK  260 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             9999999999999999999999850233465332327999999999999999999-999999999861474311234300


Q ss_pred             HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHCCCCCC----HHHHHHHHHHHHHHHHHHH
Q ss_conf             1011111123331000000000256777887631001468887-6545543153110----1588998865767788999
Q gi|254780967|r  188 VRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSS-QQIYVGIYQLGNL----FPIAFAVGGFAMSIASFIN  262 (398)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  262 (398)
                      +++.+..+..++.+.++++|..+..++... .++......... .....+.+..++.    .+......++...+..++.
T Consensus       261 kk~k~K~s~~es~k~l~~S~yL~~Ia~lVi-~Ygi~inLvE~~wK~~~k~~yp~~~~y~afmg~~~~~tgi~tii~~ll~  339 (491)
T pfam03219       261 KKKKPKMSLKESFKYLLSSRYLLLIAILVI-SYGISINLVEVVWKAKVKELYPTPNEYNAFMGKFSTWTGIVTILFMLLG  339 (491)
T ss_pred             CCCCCCCCHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             146778778999999986789999999999-9999999999999999999779999999998889999999999999998


Q ss_pred             HHHHHCCCCCCHHH
Q ss_conf             99850015651246
Q gi|254780967|r  263 SRLVEKFGIRRVSH  276 (398)
Q Consensus       263 ~~l~~r~~~~~~~~  276 (398)
                      +++.+|+|-+....
T Consensus       340 ~~iir~~Gw~~~a~  353 (491)
T pfam03219       340 SNIIRKFGWTTAAL  353 (491)
T ss_pred             HHHHHHCCHHHHHH
T ss_conf             99999804788999


No 189
>PRK10207 inner membrane transporter YhiP; Provisional
Probab=98.49  E-value=2.3e-05  Score=46.09  Aligned_cols=69  Identities=14%  Similarity=0.205  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             576699999999-99819998899999999999----99999999999998650828999999999999999851
Q gi|254780967|r   17 GIDIILPCLPKI-SDSLHLSNENYGQHLISFYL----IGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMV   86 (398)
Q Consensus        17 ~~~~~~p~lp~i-~~~l~~s~~~~~~~~~s~~~----~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~   86 (398)
                      +...+-|....+ .+.++-++.... -..+.|.    +|..++.++.|.+.|++|....+..+.+...++.+...
T Consensus       118 G~Gl~Kpnis~~vg~lY~~~d~rrd-~~FtiFYmgINiGa~l~~ll~g~l~~~~G~~~~F~~a~igM~igli~f~  191 (490)
T PRK10207        118 GNGLFKANPASLLSKCYPPKDPRLD-GAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYF  191 (490)
T ss_pred             CCCCCCCCHHHHHHHCCCCCCCHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5644788766788860688982020-2036999999999999999889999886277677778999999999999


No 190
>KOG0255 consensus
Probab=98.48  E-value=5e-05  Score=44.24  Aligned_cols=112  Identities=20%  Similarity=0.141  Sum_probs=69.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             01588998865767788999998500156512468877888999999998732577764037998998999999999999
Q gi|254780967|r  243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN  322 (398)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (398)
                      ......+...++..+|+++.|.+.||+|||+....++....+......       .......+..+-++.|+..+.....
T Consensus       119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a-------~a~~~~~~~~~Rfl~G~~~~~~~~~  191 (521)
T KOG0255         119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA-------FAPNYWMFLIFRFLSGFFGSGPLTV  191 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-------HHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999887743760699999999999889999-------7330999999999999863108999


Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999998534-6676999999999999999999999999983
Q gi|254780967|r  323 FSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       323 ~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ......|.. |+.|+.+..+ ....+.++...++..+.+..
T Consensus       192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~  231 (521)
T KOG0255         192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR  231 (521)
T ss_pred             HHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999852265576688999-87877999999999999987


No 191
>TIGR00891 2A0112 MFS transporter, sialate:H+ symporter (SHS) family; InterPro: IPR004742   The sugar transporters belong to a family of membrane proteins responsible for the transport of various sugars in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . Proteins transporting sugars and other substrates are related in this broader family.   Sialic acid transporters belong to this group.; GO: 0015144 carbohydrate transmembrane transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.47  E-value=1.4e-08  Score=63.83  Aligned_cols=117  Identities=11%  Similarity=0.120  Sum_probs=73.6

Q ss_pred             HHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             554315311-0158899886576778899999850015651246887788899999999873257776403799899899
Q gi|254780967|r  234 YVGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLA  312 (398)
Q Consensus       234 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (398)
                      .++.++.++ +.....+...+.-.+|+.+.|...||.+||.........+.+..   +..    ...+....+...=.+.
T Consensus        38 ~a~~f~~t~~d~a~l~~a~l~~R~~Gal~fGlw~Dr~gRr~p~~t~~~lfs~~~---l~c----~fap~y~~~~i~Rl~~  110 (453)
T TIGR00891        38 VAEEFDRTTKDVAFLLSAVLIVRSVGALLFGLWADRVGRRLPLVTSVVLFSVAT---LLC----AFAPTYEKLLIVRLVI  110 (453)
T ss_pred             CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH---HHC----CCCCCHHHHHHHHHHH
T ss_conf             042006844789999999999975889999887422556037888879999999---750----5576078899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999985346-67699999999999999999999999
Q gi|254780967|r  313 SFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIG  358 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g  358 (398)
                      |.+++-.+....+.++|..| |.|+..|++.. -++..|.+...+..
T Consensus       111 GigMgG~yG~~aa~~iE~~P~~~R~~~SGll~-sgya~G~~~A~~~y  156 (453)
T TIGR00891       111 GIGMGGEYGLAAALAIEKVPAKLRSVLSGLLI-SGYAVGYVLAAVVY  156 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_conf             64410046679989998403876223325888-89999999999999


No 192
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740   This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=98.46  E-value=1.8e-07  Score=57.66  Aligned_cols=165  Identities=13%  Similarity=0.115  Sum_probs=118.3

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC--CC---HHHHCCCCCC
Q ss_conf             999998199988999999999999999999999999865082899999999999999985100--11---0111002232
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTI--NS---FTGMLCMRLI  100 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a--~~---~~~l~~~r~l  100 (398)
                      |+.+++|=+-+++. ++  |.-.+.-....+-.-....|||-|++++.|++.+.+=--..++-  |+   +..|+.+-++
T Consensus       249 P~FA~SF~vk~asi-~m--s~sQ~sE~~FiLtiPFFlkRfGIK~V~l~s~Vaw~lRfgfF~YGsdp~~fg~~LL~Ls~iv  325 (435)
T TIGR00889       249 PEFADSFVVKNASI-LM--SLSQFSEILFILTIPFFLKRFGIKKVLLLSLVAWALRFGFFAYGSDPEYFGYVLLLLSMIV  325 (435)
T ss_pred             CCCCCHHHHHCCHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
T ss_conf             86201123213288-77--4889999999985225531344789999999999998765030789854899999999999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC-CEECCCCCCCCCCCCCCCCC-----------CCCCCHHHHHHHHHH
Q ss_conf             100111111100012332100011112212233-10001111111111222211-----------111101456788888
Q gi|254780967|r  101 QGIGGAAPRIITISIIRDIYDGRDMAKVLSIAM-MIFMIMPILAPSIGQATVAL-----------SGGWIGIFVCMGVIT  168 (398)
Q Consensus       101 ~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~-~~~~~g~~igp~ig~~l~~~-----------~~gWr~~f~~~~~~~  168 (398)
                      .|++--.....+..++-+-.|++-|+.+=|+.. +..++|..+|..++|..++.           ..+|+.++.+.+...
T Consensus       326 yG~afDFfnisgsvfVek~v~~~iRasAQGl~~~~~~GfG~~lG~~lsG~~ve~~~~~gePvnGL~~dW~t~Wl~fAgy~  405 (435)
T TIGR00889       326 YGCAFDFFNISGSVFVEKEVPVAIRASAQGLFLLMVNGFGSLLGYILSGVVVEKYFADGEPVNGLVFDWQTVWLVFAGYI  405 (435)
T ss_pred             HHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHH
T ss_conf             86544103445789960027866667888999999701777775445636664331278744541405513678999999


Q ss_pred             HHHHHHHHHHCCCCCCHHHHCCCCC
Q ss_conf             7777888761678864022101111
Q gi|254780967|r  169 TFITLWYYIRFPETLDPRDVRPLNL  193 (398)
Q Consensus       169 ~~~~~~~~~~~pet~~~~~~~~~~~  193 (398)
                      ++..++.....||++++-.+.|.+.
T Consensus       406 ~~lAv~Fm~~Fky~~~eit~~k~~~  430 (435)
T TIGR00889       406 VILAVLFMIFFKYSHNEITAIKVDD  430 (435)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             9999999876302566400023576


No 193
>pfam06813 Nodulin-like Nodulin-like. This family represents a conserved region within plant nodulin-like proteins.
Probab=98.44  E-value=2.2e-05  Score=46.16  Aligned_cols=178  Identities=12%  Similarity=0.020  Sum_probs=90.4

Q ss_pred             HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             31001468887654554315311015889988657677889999985001565124688778889999999987325777
Q gi|254780967|r  220 MGAILGFVNSSQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP  299 (398)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (398)
                      .+..+.|-.+++. +++.++.++..-...+...-.....++..|.+.|+++++.....+............+........
T Consensus        15 ~G~~Y~F~~yS~~-LK~~l~~sQ~qL~~ls~a~d~G~~~G~~~G~~~d~~pp~~vlliGa~~~~~GY~l~wL~v~~~i~~   93 (248)
T pfam06813        15 AGANYDFSLYSSA-LKSSLGYSQVQLNLLGVAKDLGKNFGWLSGLAAEYLPPWVVLLVGAAMGFVGYGVQWLAVTGKIPG   93 (248)
T ss_pred             CCCCCCHHHCCHH-HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             4765560531589-997709899999999999998877066589998232669999999999999999999997282378


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q ss_conf             640379989989999999999999999985346676999999999999999999999999983117999999-9999999
Q gi|254780967|r  300 IHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIG-FFGIAVS  378 (398)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~  378 (398)
                      .+.+......++.+.+.+..........++.+|+.||.+.++.-...-.++++..-+...++.+..-.+... ...-.+.
T Consensus        94 ~~~~~~~l~~~l~~ns~~~~nTa~lvt~v~nFP~~RG~vvgilK~f~GLs~AI~t~iy~a~~~~~~s~~lllla~~p~~v  173 (248)
T pfam06813        94 LPYWLLCLAICLAGNSICWFNTASLVTCIRNFPESRGVVLGILKGYAGLSAAIYTQLYTAIFGNDASSLLLLNALVPLVV  173 (248)
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             98999999999982784043155788888747433452678887760112999999999980898689999999999999


Q ss_pred             HHHHHHHHHCC---HHHHHHHCC
Q ss_conf             99999999422---000343069
Q gi|254780967|r  379 SFICILIVEKN---QMFRKTELR  398 (398)
Q Consensus       379 ~~~~~~~~~~~---~~~r~~~~r  398 (398)
                      +++...++++.   +..|++|.|
T Consensus       174 ~l~~~~~iR~~~~~~~~~~~e~~  196 (248)
T pfam06813       174 SLVALYFIRPCPGKVGEQRSESV  196 (248)
T ss_pred             HHHHHHHEECCCCCCCCCCCCCH
T ss_conf             99887532525843456764220


No 194
>KOG2532 consensus
Probab=98.41  E-value=2.4e-06  Score=51.52  Aligned_cols=24  Identities=21%  Similarity=0.290  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHHHHHH-CCCHHHH
Q ss_conf             99999999999999865-0828999
Q gi|254780967|r   48 LIGYGIAQIFYGPLSDR-FGRKIVM   71 (398)
Q Consensus        48 ~~~~~i~~~~~G~l~Dr-~Grr~~l   71 (398)
                      .++..+..+..|.+.+. +|-+.++
T Consensus       174 q~g~v~~mp~sg~lc~s~~GW~sif  198 (466)
T KOG2532         174 QLGTIITMPVSGLLCESSLGWPSIF  198 (466)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf             9989998864899862576987799


No 195
>KOG2533 consensus
Probab=98.38  E-value=2.7e-06  Score=51.21  Aligned_cols=20  Identities=20%  Similarity=0.263  Sum_probs=13.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             89988657677889999985
Q gi|254780967|r  247 AFAVGGFAMSIASFINSRLV  266 (398)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~l~  266 (398)
                      ......++.++.+++.+++.
T Consensus       318 ~~~~g~v~~i~ag~lsdr~~  337 (495)
T KOG2533         318 YDVGGIVGLILAGYLSDRLK  337 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99989999999999999875


No 196
>PRK10133 L-fucose transporter; Provisional
Probab=98.34  E-value=0.00011  Score=42.31  Aligned_cols=10  Identities=30%  Similarity=0.411  Sum_probs=3.3

Q ss_pred             HHHHHHHHHC
Q ss_conf             8999998500
Q gi|254780967|r  259 SFINSRLVEK  268 (398)
Q Consensus       259 ~~~~~~l~~r  268 (398)
                      +.+..+..++
T Consensus       279 s~~i~y~~~~  288 (438)
T PRK10133        279 SYLIRYAVEE  288 (438)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999872


No 197
>PRK11462 putative transporter; Provisional
Probab=98.28  E-value=3.9e-06  Score=50.33  Aligned_cols=12  Identities=25%  Similarity=0.426  Sum_probs=4.4

Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780967|r   49 IGYGIAQIFYGP   60 (398)
Q Consensus        49 ~~~~i~~~~~G~   60 (398)
                      ..|.+...|.+.
T Consensus       121 ~~yT~~~iPy~a  132 (460)
T PRK11462        121 LLYTVVNIPYCA  132 (460)
T ss_pred             HHHHHHHHHHHH
T ss_conf             998864536875


No 198
>PTZ00207 hypothetical protein; Provisional
Probab=98.24  E-value=6.8e-06  Score=49.00  Aligned_cols=162  Identities=14%  Similarity=0.150  Sum_probs=73.9

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC--CC-CCHHHHHHHHHHHHHHHHHHHHHH----HHCCCC
Q ss_conf             31000000000256777887631001468887654554315--31-101588998865767788999998----500156
Q gi|254780967|r  199 SFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQ--LG-NLFPIAFAVGGFAMSIASFINSRL----VEKFGI  271 (398)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~l----~~r~~~  271 (398)
                      ++++-+++.++|...+...+..+..+.....+.+++....+  .+ +...+...+++++..+|....|.+    .+|...
T Consensus       345 tf~q~L~t~dlWll~~~~fc~~G~~~vvi~N~~qI~~Al~g~~~s~~~~tl~t~l~gVgsavGRl~~G~~E~~~q~r~ae  424 (591)
T PTZ00207        345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE  424 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             89998752759999999998507525899568899997438988801578999999888888788888899988421456


Q ss_pred             CCHH-HHHHHHHHHHHHHHH-HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5124-688778889999999-98732577764037998998999999999999999998534667699999999999999
Q gi|254780967|r  272 RRVS-HYSLLIFFMITGSWL-LVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVI  349 (398)
Q Consensus       272 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~  349 (398)
                      +|.. ...+.+...+....+ +....+..     .....+++.+++.|...+.......+.+.+.-|.-.......+..+
T Consensus       425 ~RipiTial~v~~~~~~~~lilfL~lP~~-----aL~lp~~l~~l~~Gf~~a~~~lv~r~iFakd~gkhYNF~f~a~~i~  499 (591)
T PTZ00207        425 DRVPITIALFIPSVCIITMLTLFLTLPKA-----ALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLS  499 (591)
T ss_pred             CCCCEEEHHHHHHHHHHHHHHHHHHCCCH-----HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             67744439988899999999999976201-----5788999999971152899999999985336086500576788999


Q ss_pred             HHHH-HHHHHHHHHHHH
Q ss_conf             9999-999999983117
Q gi|254780967|r  350 STIL-GIIIGQSFNGTT  365 (398)
Q Consensus       350 ~~~~-~~~~g~~~~~~~  365 (398)
                      ..+. ..+.|.++|..+
T Consensus       500 siilNr~l~G~~YD~eA  516 (591)
T PTZ00207        500 AIFLNRLLYGEWYTQQA  516 (591)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99998886637754999


No 199
>KOG3810 consensus
Probab=98.22  E-value=1.5e-05  Score=47.03  Aligned_cols=326  Identities=14%  Similarity=0.141  Sum_probs=167.5

Q ss_pred             HHHHHHHHH-----HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC
Q ss_conf             999999999-----981999889999999999999999999999998650828999999999999999851001101110
Q gi|254780967|r   21 ILPCLPKIS-----DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGML   95 (398)
Q Consensus        21 ~~p~lp~i~-----~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~   95 (398)
                      +-|.=|.+.     .|.++|+.|...=+.-.-.-.|.+.-++.=.+.|-.--|++++.-.+.....-.+.-+.++.+.+-
T Consensus        20 ~RPseP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQ   99 (433)
T KOG3810          20 FRPSEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQ   99 (433)
T ss_pred             HCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCHHEE
T ss_conf             17999733411048877744888714552024689999999999986334300036651222138899998568700213


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHH
Q ss_conf             02232100111111100012332100011112212233100011111111112222111-11101456788888777788
Q gi|254780967|r   96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFVCMGVITTFITLW  174 (398)
Q Consensus        96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~~~~~~~~~~~~~  174 (398)
                      +..++-|...+. ..+-.+++-+..||+++.|+.+....+.-.|...|..++..+++.. .+++..=++ .+....+...
T Consensus       100 vlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~I-SL~~~~ia~~  177 (433)
T KOG3810         100 VLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYI-SLAEVTIAVL  177 (433)
T ss_pred             EEHHHCCHHHHH-HHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHH-HHHHHHHHHH
T ss_conf             203432718788-77525014452488998999988679998876777677888760110233440510-2989999999


Q ss_pred             HHHHCCCCCCH-------HHH-----CCCCCC------------CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             87616788640-------221-----011111------------123331000000000256777887631001468887
Q gi|254780967|r  175 YYIRFPETLDP-------RDV-----RPLNLY------------AILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSS  230 (398)
Q Consensus       175 ~~~~~pet~~~-------~~~-----~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (398)
                      ...++|..++.       ++.     ++...+            ..+++++...+||+.....+-.++...+++...+..
T Consensus       178 ~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~  257 (433)
T KOG3810         178 LALFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYT  257 (433)
T ss_pred             HHHHCCCCCHHHHHHCCCCCCEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf             98007998644654014300300331203850035678999999999999998559603354799998624357789899


Q ss_pred             HHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             65455431531--1015889988657677889999985001565124688778889999999987325777640379989
Q gi|254780967|r  231 QQIYVGIYQLG--NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAF  308 (398)
Q Consensus       231 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
                      ..+-.+....+  ...|..-+.......++.+..|.+--++.+..-...+  +....-+++++...   ...++++.-+.
T Consensus       258 Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~--~~s~~~agllf~m~---~t~~Iw~~Ya~  332 (433)
T KOG3810         258 QILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLA--VGSAVQAGLLFIMA---QTQHIWVCYAG  332 (433)
T ss_pred             HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH--HHHHHHHHHHHHHH---CCCCEEHHHHH
T ss_conf             99997637981565527899999887789999877631050002678999--99987634555444---05623200246


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98999999999999999-9985346676999999999999999999
Q gi|254780967|r  309 FFLASFQFGLINSNFSS-ISMEPFSHLAGTASSIFGFINTVISTIL  353 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~a~~l~~~~~~~~~~~~  353 (398)
                      ..+......+..+.+.. .+.+...+.-|...|+..++.-+.-.+.
T Consensus       333 yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsil  378 (433)
T KOG3810         333 YVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSIL  378 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHH
T ss_conf             8987756753334879999986402230346610789999999763


No 200
>KOG2615 consensus
Probab=98.18  E-value=4.3e-05  Score=44.57  Aligned_cols=24  Identities=21%  Similarity=0.253  Sum_probs=10.1

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             657677889999985001565124
Q gi|254780967|r  252 GFAMSIASFINSRLVEKFGIRRVS  275 (398)
Q Consensus       252 ~~~~~~~~~~~~~l~~r~~~~~~~  275 (398)
                      .+.-.+.+...|.++||+|||...
T Consensus        78 ~ilQ~~sS~~~G~~SD~yGRkpvl  101 (451)
T KOG2615          78 SILQFISSPLWGCLSDRYGRKPVL  101 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             999997665542256650761899


No 201
>KOG1237 consensus
Probab=97.95  E-value=0.00074  Score=37.76  Aligned_cols=150  Identities=15%  Similarity=0.151  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCCCH---------
Q ss_conf             99999999981999889999999999999999999999998650-82899999999999999985100110---------
Q gi|254780967|r   22 LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFIMVTINSF---------   91 (398)
Q Consensus        22 ~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~~~~a~~~---------   91 (398)
                      .+.+..+.+++|.+..+... ..+.+.-......+..+.++|.| ||-+++.++..+..++..+..++...         
T Consensus        58 ~nlv~ylt~~~~~~~~~aa~-~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~  136 (571)
T KOG1237          58 SNLVTYLTLELHASGGGAAN-NVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK  136 (571)
T ss_pred             HHHHHHHHHHHCCCCHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             57999989985645154777-87622016888888999988788489999999999999999999998741540685324


Q ss_pred             ----------------HHHCCCCCCCCCCCCCCCCCCHHHHHHHHC---CCCCC---CCCCCCCCEECCCCCCCCCCCCC
Q ss_conf             ----------------111002232100111111100012332100---01111---22122331000111111111122
Q gi|254780967|r   92 ----------------TGMLCMRLIQGIGGAAPRIITISIIRDIYD---GRDMA---KVLSIAMMIFMIMPILAPSIGQA  149 (398)
Q Consensus        92 ----------------~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~---~~~~~---~~~~~~~~~~~~g~~igp~ig~~  149 (398)
                                      ..++.+.-+..+|.|..-|...+.=+|.++   ++++.   +.+.+.....+.|..++-.+ -.
T Consensus       137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~-~v  215 (571)
T KOG1237         137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTV-LV  215 (571)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH-HH
T ss_conf             67777767773078999999999885346575667353214432466673312225223679999999999999998-86


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             221111110145678888877778
Q gi|254780967|r  150 TVALSGGWIGIFVCMGVITTFITL  173 (398)
Q Consensus       150 l~~~~~gWr~~f~~~~~~~~~~~~  173 (398)
                      ......+|..-|.+..+...+..+
T Consensus       216 yiq~~~~w~lgf~i~~~~~~lai~  239 (571)
T KOG1237         216 YIQDNVGWKLGFGIPTVLNALAIL  239 (571)
T ss_pred             HHHHCCCCEECCCHHHHHHHHHHH
T ss_conf             765337401114636999999999


No 202
>KOG2325 consensus
Probab=97.95  E-value=0.00053  Score=38.59  Aligned_cols=34  Identities=15%  Similarity=0.145  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
Q ss_conf             999999999999986508-2899999999999999
Q gi|254780967|r   49 IGYGIAQIFYGPLSDRFG-RKIVMMFGLVIHIIST   82 (398)
Q Consensus        49 ~~~~i~~~~~G~l~Dr~G-rr~~l~~g~~~~~i~~   82 (398)
                      +-..++.+..+.+.++-. +|..++.+-.+.+++.
T Consensus       110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~  144 (488)
T KOG2325         110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV  144 (488)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
T ss_conf             99999999999998624230779999999757575


No 203
>pfam05978 UNC-93 Ion channel regulatory protein UNC-93. This family of proteins is a component of a multi-subunit protein complex which is involved in the coordination of muscle contraction. UNC-93 is most likely an ion channel regulatory protein.
Probab=97.93  E-value=1.4e-05  Score=47.36  Aligned_cols=126  Identities=11%  Similarity=0.048  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
Q ss_conf             699999999998-1999889999999999999999999999998650828999999999999999851001101110022
Q gi|254780967|r   20 IILPCLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMR   98 (398)
Q Consensus        20 ~~~p~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r   98 (398)
                      +..+.+..+.+| .+..+...|...++.-...++++.++...+.+|+|.|..+++|...+..... ..+-+|.+.++.+-
T Consensus        18 i~~svi~si~~~~p~~i~~~~Gy~SLaiiY~~f~~s~~faP~iv~~lg~K~~lv~g~~~Y~~f~~-~~~~p~~~~ly~as   96 (157)
T pfam05978        18 ILESVIHSLHERDPGTISAYAGYYSLAIIYFFFTVSCLFAPSVVDILTPKWAMVIGALCYASFQL-GFLFLNSYYLYFSS   96 (157)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_conf             99999998720376766578647879999999999997179999997509999999999999999-99898799999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCC
Q ss_conf             321001111111000123321000111122122331000111111111
Q gi|254780967|r   99 LIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSI  146 (398)
Q Consensus        99 ~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~i  146 (398)
                      ++.|++.+..+..--.++.+..++++++|..++.-..+..+.++|-++
T Consensus        97 ~l~G~~aa~lw~~qg~ylt~~s~~~t~~rn~giFW~i~q~s~i~Gnl~  144 (157)
T pfam05978        97 ALLGVGAAFLWTGQGQYLTENSTRETIERNTSIQWAIGKSSLIFGGIF  144 (157)
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             998873999998025034323872001103679999997839998899


No 204
>KOG2816 consensus
Probab=97.93  E-value=2e-05  Score=46.38  Aligned_cols=19  Identities=16%  Similarity=0.228  Sum_probs=8.4

Q ss_pred             HHHHHHHC-CCHHHHHHHHH
Q ss_conf             99998650-82899999999
Q gi|254780967|r   58 YGPLSDRF-GRKIVMMFGLV   76 (398)
Q Consensus        58 ~G~l~Dr~-Grr~~l~~g~~   76 (398)
                      ....+|.- .++|....|++
T Consensus       134 ~a~vadis~~~~R~~~~gll  153 (463)
T KOG2816         134 FAYVADISSEEERSSSIGLL  153 (463)
T ss_pred             HHHHHCCCCHHHHHHHHHHH
T ss_conf             66752021178999999999


No 205
>TIGR00882 2A0105 oligosaccharide:H+ symporter; InterPro: IPR000576 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) . The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli .; GO: 0005403 hydrogen:sugar symporter activity, 0006810 transport, 0016020 membrane.
Probab=97.88  E-value=6.3e-05  Score=43.68  Aligned_cols=112  Identities=7%  Similarity=0.099  Sum_probs=79.4

Q ss_pred             CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             00025677788763100146888765455431531-10158899886576778899999850015651246887788899
Q gi|254780967|r  207 RASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMI  285 (398)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~  285 (398)
                      +++|...+...+.+..+-.|....|.++.|..|.+ ++.|..++...+..+.-.++.|-+.||.|-||...+.+....+.
T Consensus         2 ~~f~~f~~ffFlyFfim~~~fpf~piWL~~~~gl~kt~tGi~fs~~sl~si~Fqp~~G~~sDkLGLkK~LlW~is~lLvl   81 (397)
T TIGR00882         2 TNFWIFGLFFFLYFFIMSAYFPFFPIWLKDVNGLTKTETGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISLLLVL   81 (397)
T ss_pred             CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             75120388999999999988533477884225477763577888899999987666400201235506899999999998


Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999873257776403799899899999999999
Q gi|254780967|r  286 TGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINS  321 (398)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (398)
                      .+-..+....+.....   ..+....++...|+.+.
T Consensus        82 faPFfiyVf~PLL~~N---i~~G~l~Gg~y~G~~f~  114 (397)
T TIGR00882        82 FAPFFIYVFAPLLQSN---ILVGALVGGLYLGFVFS  114 (397)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_conf             6159989867799989---99999986999877873


No 206
>TIGR00926 2A1704 Oligopeptide transporter (Peptide:H+ symporter); InterPro: IPR004768 Oligopeptide transporter, peptide:H+ symporter supports the proton-coupled intake of oligopeptides of 2 to 4 amino acids. These proteins may constitute a major route for the absorption of the end products of protein digestion.; GO: 0015198 oligopeptide transporter activity, 0006857 oligopeptide transport, 0016021 integral to membrane.
Probab=97.86  E-value=7.7e-06  Score=48.69  Aligned_cols=157  Identities=9%  Similarity=0.144  Sum_probs=100.3

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCC----------------
Q ss_conf             999981999889999999999999999999999998650-828999999999999999851001----------------
Q gi|254780967|r   27 KISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF-GRKIVMMFGLVIHIISTFIMVTIN----------------   89 (398)
Q Consensus        27 ~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~~~~~a~----------------   89 (398)
                      .+...++.++++...+--+.-.+.| +..+++..++|-| ||=|+++..-+++++|.++.+++.                
T Consensus        29 Yl~n~L~f~~~~sT~~fH~Ft~lcY-~tPLlGsiiADg~lGKFkTI~y~S~vY~~G~v~lslgai~~l~~hdhdGsPnn~  107 (781)
T TIGR00926        29 YLLNFLGFSESTSTVLFHAFTVLCY-LTPLLGSIIADGWLGKFKTILYLSIVYAIGQVVLSLGAIPLLGSHDHDGSPNNK  107 (781)
T ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             9987507783233347778889999-858899999633345244542035899998999888402356666677888777


Q ss_pred             --CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC-CC---CCCCCCCCCCEECCCCCCC----CCCCCCC--CC-CCCC
Q ss_conf             --101110022321001111111000123321000-11---1122122331000111111----1111222--21-1111
Q gi|254780967|r   90 --SFTGMLCMRLIQGIGGAAPRIITISIIRDIYDG-RD---MAKVLSIAMMIFMIMPILA----PSIGQAT--VA-LSGG  156 (398)
Q Consensus        90 --~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~-~~---~~~~~~~~~~~~~~g~~ig----p~ig~~l--~~-~~~g  156 (398)
                        +-++=+++-++.++|.|+.-|...|.-.|.|+. ++   |++.+|+...+.+.|.+++    |++=+-.  .. +..=
T Consensus       108 ~~h~~ldl~GL~lIAlGTGGIKPCVSAFGGDQF~~P~q~~~~s~FFS~FYfaINAGSLiSt~iTPiLR~~~~CfGs~~~C  187 (781)
T TIGR00926       108 SLHPALDLVGLLLIALGTGGIKPCVSAFGGDQFEEPGQERMRSRFFSMFYFAINAGSLISTIITPILRGSVKCFGSQQDC  187 (781)
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCC
T ss_conf             75157889999999985279776637887777787458999985201788898788999998625460002455888543


Q ss_pred             CCHHHHHHHHHHHHHHHHH---HHHCCCCCC
Q ss_conf             1014567888887777888---761678864
Q gi|254780967|r  157 WIGIFVCMGVITTFITLWY---YIRFPETLD  184 (398)
Q Consensus       157 Wr~~f~~~~~~~~~~~~~~---~~~~pet~~  184 (398)
                      +...|-+-|++.++..+..   ..+.|..+|
T Consensus       188 ypLAFGvPaiLMi~AlivF~~Gs~~YkK~PP  218 (781)
T TIGR00926       188 YPLAFGVPAILMIVALIVFMAGSFMYKKQPP  218 (781)
T ss_pred             CCHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             4200341689999999999830313475917


No 207
>PRK03612 spermidine synthase; Provisional
Probab=97.82  E-value=0.00023  Score=40.54  Aligned_cols=152  Identities=13%  Similarity=0.132  Sum_probs=81.5

Q ss_pred             HHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHH----HHCC-CCHHHH
Q ss_conf             99999998-19998899999999999999999999999986508289999---999999999998----5100-110111
Q gi|254780967|r   24 CLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMM---FGLVIHIISTFI----MVTI-NSFTGM   94 (398)
Q Consensus        24 ~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~---~g~~~~~i~~~~----~~~a-~~~~~l   94 (398)
                      .+..+... +|-|..|.. .+++.|+.++++|+....++.||--++-..+   ++++. ..+...    .++. +.-..+
T Consensus        36 ~~~~l~s~llG~sv~qfs-ivIg~~L~~mGlGs~lar~~~~~~~~~F~~iEl~lalig-g~s~~~l~~~fa~~~~~~~~l  113 (516)
T PRK03612         36 LLSTLASYLLGDSVLQFS-LIIGLYLFAMGVGALLSKYIRDDAAAGFVAVELLLALLG-GLSALILYAVFAFLGGQQLPL  113 (516)
T ss_pred             HHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999540999999-999999999999999986630006788999999999998-879999999999765689999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHH
Q ss_conf             002232100111111100012332100011112212233100011111111112222111111-0145678888877778
Q gi|254780967|r   95 LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW-IGIFVCMGVITTFITL  173 (398)
Q Consensus        95 ~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW-r~~f~~~~~~~~~~~~  173 (398)
                      +..-++.|+-.|+..|....+..+.. .++.++..+.+.....+|.++|+++.+.++-...|- |..+ +.+.+.++..+
T Consensus       114 ~~~~~~iG~LiG~EiPLl~rl~~~~~-~~~~~~~vg~v~a~DylGaliGsl~f~flLlP~lGl~~~~~-l~g~lN~~~al  191 (516)
T PRK03612        114 VLATLLIGLLIGMEIPLLMRILQRGR-DAHAGHNVATVLAADYLGALVGGLAFPFLLLPRLGLLRTAA-LTGSLNLLAAL  191 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf             99999999998527899999998622-00222467888867646788999999999987632678999-99999999999


Q ss_pred             HHHHHC
Q ss_conf             887616
Q gi|254780967|r  174 WYYIRF  179 (398)
Q Consensus       174 ~~~~~~  179 (398)
                      +..+..
T Consensus       192 ~~~~~f  197 (516)
T PRK03612        192 VFLWLF  197 (516)
T ss_pred             HHHHHH
T ss_conf             999986


No 208
>pfam07672 MFS_Mycoplasma Mycoplasma MFS transporter. These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.82  E-value=0.00048  Score=38.81  Aligned_cols=96  Identities=16%  Similarity=0.110  Sum_probs=55.0

Q ss_pred             CCCCCCCCCCCEECCCCCCC--CCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC---CHHHHCCCCCCCCC
Q ss_conf             11122122331000111111--111122-2211111101456788888777788876167886---40221011111123
Q gi|254780967|r  124 DMAKVLSIAMMIFMIMPILA--PSIGQA-TVALSGGWIGIFVCMGVITTFITLWYYIRFPETL---DPRDVRPLNLYAIL  197 (398)
Q Consensus       124 ~~~~~~~~~~~~~~~g~~ig--p~ig~~-l~~~~~gWr~~f~~~~~~~~~~~~~~~~~~pet~---~~~~~~~~~~~~~~  197 (398)
                      +++.......-++++|.++.  |.+-+. -.....+||.++.+.+++.++.+++...+-+|-.   ++++++.....+..
T Consensus         3 ~K~~~S~~~~~gfniGaii~~ipFl~~~~~~~~~~~W~~i~~~~~ll~~i~lily~~fgk~fD~~~~~k~~k~~~~~~~~   82 (265)
T pfam07672         3 TKSKLSNANTWGFNIGAIFANAPFLFSSVQQAATKNWVIILTAFILLIFAILILYAWFGKEVDPVAPQKQTKTEQTLSAK   82 (265)
T ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             66325675203464749999999988889999874079899999999999999999980465324652332312334457


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             3310000000002567778876
Q gi|254780967|r  198 HSFSLIFKHRASTLYNIANSLT  219 (398)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~  219 (398)
                      .+.++.+|+|..|...+..+..
T Consensus        83 ~s~~~~LK~K~Tw~~~l~yG~w  104 (265)
T pfam07672        83 PSALSILKNKETWKLILIYGIW  104 (265)
T ss_pred             CCHHHHHCCCHHHHHHHHHHHH
T ss_conf             2088885671377889998566


No 209
>TIGR00712 glpT glycerol-3-phosphate transporter; InterPro: IPR005267    This family includes very hydrophobic proteins, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. ; GO: 0015169 glycerol-3-phosphate transmembrane transporter activity, 0015794 glycerol-3-phosphate transport, 0016021 integral to membrane.
Probab=97.75  E-value=6.4e-06  Score=49.15  Aligned_cols=126  Identities=14%  Similarity=0.173  Sum_probs=93.0

Q ss_pred             HHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             8765455431531-101588998865767788999998500156512468877888999999998732577764037998
Q gi|254780967|r  229 SSQQIYVGIYQLG-NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIA  307 (398)
Q Consensus       229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (398)
                      ..|.+ ++....+ ...+...+...++....-++.+..+||-.+|.....++.+..++.   .+....+..+.++.+..+
T Consensus        51 A~PyL-~~~GlfSk~eLG~~lsa~siAYG~SKFiMg~vSDRsNPR~FL~~GL~Lsa~v~---~l~~~~PW~TSsiaiMfv  126 (468)
T TIGR00712        51 AIPYL-VEQGLFSKAELGLVLSAVSIAYGFSKFIMGSVSDRSNPRVFLPAGLLLSAIVM---LLMGLVPWATSSIAIMFV  126 (468)
T ss_pred             CCCHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHH
T ss_conf             27056-75575210357899999999864567886035567672168778899999999---998421403579999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             998999999999999999998534-667699999999999999999999999
Q gi|254780967|r  308 FFFLASFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIG  358 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g  358 (398)
                      ++++.|-..|+-.|++-.....=. .++||+..|+-|..+++||.+.+.++-
T Consensus       127 ~~Fl~GWFQGMGWPPCGRTMvHW~S~~ERGt~vSiWN~AHNiGG~i~~~lv~  178 (468)
T TIGR00712       127 LLFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVSIWNVAHNIGGGIPAALVL  178 (468)
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf             9998211048879885442000002357786257621520025305899999


No 210
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.75  E-value=0.00045  Score=38.96  Aligned_cols=33  Identities=33%  Similarity=0.359  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             999999999999986508289999999999999
Q gi|254780967|r   49 IGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus        49 ~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      +|..++.+..|.++|++|..-.+-.+.+...++
T Consensus       166 iGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~g  198 (498)
T COG3104         166 IGSLIAPIITGLLAINYGWHVGFGLAAVGMIIG  198 (498)
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf             487789999999998606899999999999999


No 211
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.66  E-value=0.0023  Score=35.04  Aligned_cols=263  Identities=14%  Similarity=0.153  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             99999999988657669999999999819998--8999999999999-99999999999986508289999999999999
Q gi|254780967|r    5 IVIAMLMAINSLGIDIILPCLPKISDSLHLSN--ENYGQHLISFYLI-GYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         5 ~~l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~--~~~~~~~~s~~~~-~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      +-+++++++..+..+    .+-.+.+++.++.  ++...++-+.+.+ ...+..++.+.+.+++.|++++-.-...+...
T Consensus        30 lpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~f  105 (509)
T COG3202          30 LPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGF  105 (509)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHCHHEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             999999999999999----9986110168605763211999999754199999999999973078999999999999999


Q ss_pred             HHHHHCC---------CC----------HHH-----HCCC--------CCCCCCCCCCCCC-CCHHHHHHHHCCCCCCCC
Q ss_conf             9985100---------11----------011-----1002--------2321001111111-000123321000111122
Q gi|254780967|r   82 TFIMVTI---------NS----------FTG-----MLCM--------RLIQGIGGAAPRI-ITISIIRDIYDGRDMAKV  128 (398)
Q Consensus        82 ~~~~~~a---------~~----------~~~-----l~~~--------r~l~G~g~~~~~~-~~~a~i~~~~~~~~~~~~  128 (398)
                      -+++++.         +|          .++     +.+.        ....-+-.+.... .-.....|.++.+|..|.
T Consensus       106 F~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRF  185 (509)
T COG3202         106 FALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRF  185 (509)
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999998235022689879999887418753257767722067999999999988999999999999886109875036


Q ss_pred             CCCCCCEECCCCCCCCCCCCCCCCCCCC---------CCHHHHHHHHHHHHHHHHHHHHCC-----CCCCH-HH----HC
Q ss_conf             1223310001111111111222211111---------101456788888777788876167-----88640-22----10
Q gi|254780967|r  129 LSIAMMIFMIMPILAPSIGQATVALSGG---------WIGIFVCMGVITTFITLWYYIRFP-----ETLDP-RD----VR  189 (398)
Q Consensus       129 ~~~~~~~~~~g~~igp~ig~~l~~~~~g---------Wr~~f~~~~~~~~~~~~~~~~~~p-----et~~~-~~----~~  189 (398)
                      ++..+.+.+++..++..+-..+......         -+..+.+.+..+.++.. ..+++.     +++.. ++    ++
T Consensus       186 y~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~-l~~~~~r~il~~~~f~~~~~~kk~~  264 (509)
T COG3202         186 YPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAIL-LYRYINRNVLTDPLFYLRAKKKKKK  264 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHCCCCC
T ss_conf             899999989999999999999863216675787899999999999999999999-9999975324674115777421445


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHCCCCCCH----HHHHHHHHHH-HHHHHHHHH
Q ss_conf             1111112333100000000025677788763100146888-765455431531101----5889988657-677889999
Q gi|254780967|r  190 PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNS-SQQIYVGIYQLGNLF----PIAFAVGGFA-MSIASFINS  263 (398)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~  263 (398)
                      +....+..++++.+.|+|..+..++.. ++++........ ...-..+.+......    +......++. ..+.-...+
T Consensus       265 ~k~k~~~~~s~k~i~~SkyL~~ial~v-l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s  343 (509)
T COG3202         265 KKLKLGLIESFKMILRSKYLGAIALLV-LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGS  343 (509)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             545675789999998656999999999-9998788888899986588856875479999888999999999999996258


Q ss_pred             HHHHCCCCCC
Q ss_conf             9850015651
Q gi|254780967|r  264 RLVEKFGIRR  273 (398)
Q Consensus       264 ~l~~r~~~~~  273 (398)
                      .+.+|.|-..
T Consensus       344 ~~ir~~GW~~  353 (509)
T COG3202         344 NLIRRVGWFT  353 (509)
T ss_pred             HHHHHHHHHH
T ss_conf             8998842578


No 212
>KOG0252 consensus
Probab=97.54  E-value=0.00079  Score=37.62  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             88657677889999985001565124688778889
Q gi|254780967|r  250 VGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFM  284 (398)
Q Consensus       250 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~  284 (398)
                      ...++.+.|.++.|++.||+|||+..-..+.+..+
T Consensus        92 ~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi  126 (538)
T KOG0252          92 AALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMII  126 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             89988999999998888662312466678999999


No 213
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter; InterPro: IPR004745 Na(+)-dependent inorganic phosphate cotransporter proteins belong to this group. The mammalian proteins are important for the resorption of phosphate by the kidney and may be involved in actively transporting phosphate into cells via sodium ion cotransport in the renal brush border membrane.; GO: 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=97.28  E-value=0.00015  Score=41.64  Aligned_cols=136  Identities=15%  Similarity=0.149  Sum_probs=74.3

Q ss_pred             HHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHH
Q ss_conf             54315311-01588998865767788999998500156512468877888999999998732577764037-99899899
Q gi|254780967|r  235 VGIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLI-FIAFFFLA  312 (398)
Q Consensus       235 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  312 (398)
                      .+.|.++. ..|..++-...+..+...-.|++++|++.+|..-.++.+..+...   +........  ... .+..=++.
T Consensus        84 ~~~f~Ws~~~QG~ilSS~fyG~~~~qiP~G~la~~Y~~k~~iG~~~~~~~v~~~---liP~aA~~g--~~~G~~~~Rv~q  158 (514)
T TIGR00894        84 NPEFNWSEDQQGLILSSFFYGSVIIQIPVGYLAGKYGTKKVIGFALLLSSVLSF---LIPIAAGVG--FAWGVIVLRVLQ  158 (514)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHH---HHHHHHHCC--CCEEEEEEEEHH
T ss_conf             888478677636887566661252341603563140437999999999999998---746554121--011023453212


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH
Q ss_conf             99999999999999985-34667699999999999999999999999998311------79999999999
Q gi|254780967|r  313 SFQFGLINSNFSSISME-PFSHLAGTASSIFGFINTVISTILGIIIGQSFNGT------TYPITIGFFGI  375 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~-~~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~  375 (398)
                      |.+.|.+.|....+... .+|++|++..|........|..+.-++.|.+.|.+      .||.....+++
T Consensus       159 G~~~G~~~p~~h~l~~KW~PP~ER~r~~s~~~sG~~~G~~i~lp~~G~i~~~~GskF~~GWP~vFYifGi  228 (514)
T TIGR00894       159 GIGQGLVSPAQHELLAKWIPPNERSRLTSAVLSGFQLGTFIVLPISGLICESDGSKFLLGWPMVFYIFGI  228 (514)
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHH
T ss_conf             0123311464302266305887505799998626889899998630455535674014776146778899


No 214
>TIGR00887 2A0109 phosphate:H+ symporter; InterPro: IPR004738 In yeast the high-affinity transporter for external inorganic phosphate is not essential since a constitutive, low-affinity transporter exists. The induction of the yeast protein is depressed by phosphate starvation.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=97.14  E-value=0.0031  Score=34.32  Aligned_cols=114  Identities=13%  Similarity=0.114  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf             588998865767788999998500156512468877888999999998732577764037998-9989999999999999
Q gi|254780967|r  245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIA-FFFLASFQFGLINSNF  323 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  323 (398)
                      +..-....++-.+|++..|++.|++||||+.-.-+.+..++.....+.......+......+. .-+..++|.|-=+|.+
T Consensus        69 ~~~~~sa~~Gt~~GQL~FG~laD~~GRK~vYG~el~i~i~at~a~~l~~~si~~~~~~~~~~~f~R~~lG~GIGGDYPLS  148 (557)
T TIGR00887        69 AAVKVSASIGTLAGQLFFGWLADILGRKRVYGLELIIMIVATVASALSAGSISSPTSVVATLCFWRVILGVGIGGDYPLS  148 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf             35653344326788887676411014300111344578776688650451001036777798656768715877760355


Q ss_pred             H--HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9--9998534-6676999999999999999999999999
Q gi|254780967|r  324 S--SISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQ  359 (398)
Q Consensus       324 ~--~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~  359 (398)
                      .  .+..|-. .|.||..++.+.+.| ..|.+++.++..
T Consensus       149 af~~ItSEfA~~K~RGA~~aaVFAmQ-GfG~LagaiVal  186 (557)
T TIGR00887       149 AFQIITSEFATKKWRGAMMAAVFAMQ-GFGILAGAIVAL  186 (557)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf             88788853225323478999999988-887999999999


No 215
>PRK03612 spermidine synthase; Provisional
Probab=96.97  E-value=0.016  Score=30.49  Aligned_cols=113  Identities=12%  Similarity=0.089  Sum_probs=46.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH--HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             10158899886576778899999850015651246887788899--9999998732577764037998998999999999
Q gi|254780967|r  242 NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMI--TGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLI  319 (398)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (398)
                      .+++...+....++.+|++++.++.++.-. ........+..+.  +...+.... ..............+..+.-.|+-
T Consensus        50 ~qfsivIg~~L~~mGlGs~lar~~~~~~~~-~F~~iEl~laligg~s~~~l~~~f-a~~~~~~~~l~~~~~~iG~LiG~E  127 (516)
T PRK03612         50 LQFSLIIGLYLFAMGVGALLSKYIRDDAAA-GFVAVELLLALLGGLSALILYAVF-AFLGGQQLPLVLATLLIGLLIGME  127 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999998663000678-899999999999887999999999-976568999999999999998527


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999985346676999999999999999999999
Q gi|254780967|r  320 NSNFSSISMEPFSHLAGTASSIFGFINTVISTILGII  356 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~  356 (398)
                      .|....+..+...+..|...+-.....+.|+.+++.+
T Consensus       128 iPLl~rl~~~~~~~~~~~~vg~v~a~DylGaliGsl~  164 (516)
T PRK03612        128 IPLLMRILQRGRDAHAGHNVATVLAADYLGALVGGLA  164 (516)
T ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999999986220022246788886764678899999


No 216
>TIGR00806 rfc reduced folate carrier; InterPro: IPR002666   The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy , such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules .; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane.
Probab=96.96  E-value=0.016  Score=30.41  Aligned_cols=326  Identities=14%  Similarity=0.134  Sum_probs=178.5

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf             99999819998899999999999999999999999986508289999999999999998510011011100223210011
Q gi|254780967|r   26 PKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGG  105 (398)
Q Consensus        26 p~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~  105 (398)
                      |..-.+.+.|..++..-+.-...-.+...-+|.=-|.|.+-.||++++-.+-+...-++..+-+|.+..=+.-++-|...
T Consensus        50 ~Y~~~~~n~~~~~~~~~i~P~l~YS~L~~LvP~FLLTd~l~YkP~L~l~~lSf~~~Wlll~lG~SV~~~QllE~FY~~~~  129 (542)
T TIGR00806        50 PYLLTVLNFTEETVTNEIIPVLPYSYLAVLVPVFLLTDYLRYKPVLVLQALSFVAVWLLLLLGKSVVHMQLLEVFYSVTM  129 (542)
T ss_pred             HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             24554553106764045211015889999999999866773126999988999999999996058999999999988999


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HHHHHHHHHHCCCC
Q ss_conf             111110001233210001111221223310001111111111222211111101456788888---77778887616788
Q gi|254780967|r  106 AAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVIT---TFITLWYYIRFPET  182 (398)
Q Consensus       106 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~---~~~~~~~~~~~pet  182 (398)
                      +.- .+-.++|-...++++-.++-++--++.-+|..++..+|..++.  .+|... ..+-.+.   ....+.....+|+.
T Consensus       130 A~~-IAY~~YIf~~V~~~~Y~~~~~y~RAA~L~G~F~~~~L~Q~L~~--l~~~s~-~~LN~isL~~~~f~v~Lal~L~~~  205 (542)
T TIGR00806       130 AAR-IAYSSYIFSLVRPSRYKRAAAYSRAAVLLGVFLSSVLGQLLVT--LNWVSY-STLNIISLVFLTFSVVLALFLKGR  205 (542)
T ss_pred             HHH-HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCHHHH-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             998-8888765300251333346778899999999999999999752--223567-786689999999999999870787


Q ss_pred             CCHH------------------------HH--CCCCCCCC-------------CCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             6402------------------------21--01111112-------------333100000000025677788763100
Q gi|254780967|r  183 LDPR------------------------DV--RPLNLYAI-------------LHSFSLIFKHRASTLYNIANSLTMGAI  223 (398)
Q Consensus       183 ~~~~------------------------~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (398)
                      +.++                        ..  ++.+....             .++..+..|+|......+-..+...++
T Consensus       206 p~~~~f~~~~~~~~~~~~~~~L~~~~~~~~rpe~~k~~~~L~~~C~~~flv~l~~~L~~~~r~P~~~~Ws~W~~~~S~~y  285 (542)
T TIGR00806       206 PKRSLFFNRLEDKRCEALPCELEQMVPGPGRPEPGKLEDYLRVACRDSFLVRLLSELVAILRNPLLLLWSLWWVLNSAGY  285 (542)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             32678742555432000155587615777887315799998656557899999999999861886215789999987789


Q ss_pred             HHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             1468887654554315311----015889988657677889999985001565124688778889999999987325777
Q gi|254780967|r  224 LGFVNSSQQIYVGIYQLGN----LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHP  299 (398)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (398)
                      +...++...+-.......+    ..|..-+...+..++..+.++.+--||.+-.-..  +......-+++++......+.
T Consensus       286 Y~i~~Y~~~LW~~~~~~~n~~~~YNG~~~A~~~LLg~~~~~~~~~~~~~W~~W~~ll--ia~~~~~QAgL~F~m~~~~~~  363 (542)
T TIGR00806       286 YLIVYYVHVLWGTLDESLNKARVYNGAVDAASTLLGAITSLIAGFLNIRWARWSKLL--IAVVSAIQAGLVFLMSQSHYV  363 (542)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH--HHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999999853114012100003776789888876788754123302133463588--999999999999999841343


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             64037998998999999999999999-99853466769999999999999999999999
Q gi|254780967|r  300 IHLLIFIAFFFLASFQFGLINSNFSS-ISMEPFSHLAGTASSIFGFINTVISTILGIII  357 (398)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~a~~l~~~~~~~~~~~~~~~~  357 (398)
                      ..+++....+.+.=...-+..|.++. ++.....+.-|...|+..++....-.+...++
T Consensus       364 ~~I~v~Y~~yvlfR~~YQ~~~~IA~~~~A~sL~~~L~aL~FGiNTF~A~~l~~~~T~vV  422 (542)
T TIGR00806       364 SEIWVLYVTYVLFRGIYQLLVPIATFQIASSLSKELCALVFGINTFLALALKTIITLVV  422 (542)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_conf             14456888999998899988789989998866477899997699999999987644001


No 217
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=96.85  E-value=0.02  Score=29.89  Aligned_cols=12  Identities=17%  Similarity=-0.036  Sum_probs=4.2

Q ss_pred             CCCCCCEECCCC
Q ss_conf             122331000111
Q gi|254780967|r  129 LSIAMMIFMIMP  140 (398)
Q Consensus       129 ~~~~~~~~~~g~  140 (398)
                      .+++...+-++.
T Consensus        40 ~G~I~s~~di~~   51 (582)
T pfam03137        40 SGIISSSYDIGN   51 (582)
T ss_pred             HHHHHHHHHHHH
T ss_conf             123442977999


No 218
>KOG3098 consensus
Probab=96.81  E-value=0.0029  Score=34.53  Aligned_cols=62  Identities=16%  Similarity=0.026  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC
Q ss_conf             99999999999999999865----082899999999999999985100110111002232100111
Q gi|254780967|r   45 SFYLIGYGIAQIFYGPLSDR----FGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGA  106 (398)
Q Consensus        45 s~~~~~~~i~~~~~G~l~Dr----~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~  106 (398)
                      ++|.-.--+...+.....+|    +...--+..-.+++...++.|.+++++--.+-.|..+-++..
T Consensus        23 ~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~   88 (461)
T KOG3098          23 TAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGAT   88 (461)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             862026778889999998418887577752799999999999999815889988607999999868


No 219
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter); InterPro: IPR005279   The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analysis of a number of recently discovered peptide transport proteins .   This family consists of bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. .
Probab=96.78  E-value=0.023  Score=29.60  Aligned_cols=119  Identities=8%  Similarity=0.060  Sum_probs=53.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CC--HHHHHHHHHHHHHHHHHHHH-----HCCCCCCCCHHHHHH
Q ss_conf             531101588998865767788999998500156---51--24688778889999999987-----325777640379989
Q gi|254780967|r  239 QLGNLFPIAFAVGGFAMSIASFINSRLVEKFGI---RR--VSHYSLLIFFMITGSWLLVQ-----ITSNHPIHLLIFIAF  308 (398)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~---~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  308 (398)
                      +.+-...+..+++.+..++.+.+...+-.|.++   +.  ..+.+..........+....     ....+..+.+.++..
T Consensus       324 g~svpv~w~qs~np~wv~~~spv~A~~wt~lgr~Gk~p~~plKF~~g~~~~gasFl~f~a~G~~fa~~g~~~~~~~~vlI  403 (501)
T TIGR00924       324 GFSVPVAWFQSLNPLWVVVLSPVLAAVWTKLGRKGKDPKTPLKFALGLLLVGASFLTFVASGLWFADAGGKASAAFLVLI  403 (501)
T ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
T ss_conf             44716200544238878898679999999847779998725788899999977999850453455338763469999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             989999999999999999985346-6769999999999999999999999
Q gi|254780967|r  309 FFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIII  357 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~  357 (398)
                      .+....|-=++.|..-+....-.| +..+...++....+..+....|.+.
T Consensus       404 yl~~t~GELMiSp~gLs~~tKiaP~~~~~q~~g~wFLa~~~g~~lgG~l~  453 (501)
T TIGR00924       404 YLVQTLGELMISPVGLSVSTKIAPQKYKSQMLGLWFLAVALGSLLGGLLA  453 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99997518886243211344036535778999999999999887630454


No 220
>KOG2563 consensus
Probab=96.70  E-value=0.026  Score=29.24  Aligned_cols=57  Identities=16%  Similarity=0.172  Sum_probs=26.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9989999999999999999985346-67699999999999999999999999998311
Q gi|254780967|r  308 FFFLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGT  364 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~  364 (398)
                      .....+.+.+........+....-+ ..-|...+..+......|.+++.+.|.+.|.+
T Consensus       271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt  328 (480)
T KOG2563         271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT  328 (480)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999853289999999984421012667742243567999998899998887544355


No 221
>TIGR00788 fbt folate/biopterin transporter; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters , . This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).; GO: 0016020 membrane.
Probab=96.65  E-value=0.004  Score=33.77  Aligned_cols=159  Identities=14%  Similarity=0.156  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---C-CHHHHH-HHHH-HHHHHHHHHHCCC--CHHH
Q ss_conf             99999999981999889999999999999999999999998650---8-289999-9999-9999999851001--1011
Q gi|254780967|r   22 LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRF---G-RKIVMM-FGLV-IHIISTFIMVTIN--SFTG   93 (398)
Q Consensus        22 ~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~---G-rr~~l~-~g~~-~~~i~~~~~~~a~--~~~~   93 (398)
                      .|.-|.+.++|+++..+.. -..+.+-+++.+ +++.|..+|-+   | |||-+. .+.+ ...++.....++.  +...
T Consensus        52 ~~~~~~l~~~l~l~~a~~~-~~~g~~~lg~~~-~~~~~~~~d~f~LfGY~~R~y~v~s~l~g~~~a~~~~~L~~~~~~~~  129 (594)
T TIGR00788        52 LALSPMLTDDLGLDGARYQ-RLTGLSSLGWAL-KPLAGVLSDLFPLFGYTKRWYLVLSGLLGSTVAILYGLLPGKVSSAK  129 (594)
T ss_pred             HCCHHHHHEECCCCHHHHH-HCCCHHHHHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf             1011221000024467673-136222188899-99999999751377742378899889999999999964033102588


Q ss_pred             H-CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC---CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             1-002232100111111100012332100011112---212233100011111111112222111111014567888887
Q gi|254780967|r   94 M-LCMRLIQGIGGAAPRIITISIIRDIYDGRDMAK---VLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITT  169 (398)
Q Consensus        94 l-~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~---~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~  169 (398)
                      . -..-++.-+..+...+.......|....+.+..   ..++.-.....|.+++..++|.+.+. ..-|..|++.+.+..
T Consensus       130 ~a~~~~~l~~l~~~~~Dv~~~~~~~~~~R~~~~~~gpsL~S~~w~~~~~G~~~~s~l~G~L~~~-~~~r~~f~i~a~l~l  208 (594)
T TIGR00788       130 VAALLIFLAALSKALSDVLVDSLYVERIRQESPSAGPSLVSLVWGASALGGLISSLLSGPLLDK-TLTRILFLITAALLL  208 (594)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEHHHHHHHH
T ss_conf             9999999999864467788888775554101322565168999999998899997544111026-785244128778899


Q ss_pred             HH-HHHHHHHCCCCC
Q ss_conf             77-788876167886
Q gi|254780967|r  170 FI-TLWYYIRFPETL  183 (398)
Q Consensus       170 ~~-~~~~~~~~pet~  183 (398)
                      +. ..++....+|..
T Consensus       209 l~~l~~V~~~~~E~~  223 (594)
T TIGR00788       209 LQGLLFVANLSKERR  223 (594)
T ss_pred             HHHHHHHHHHHCCCC
T ss_conf             999999987622553


No 222
>pfam05631 DUF791 Protein of unknown function (DUF791). This family consists of several eukaryotic proteins of unknown function.
Probab=96.41  E-value=0.041  Score=28.16  Aligned_cols=85  Identities=19%  Similarity=0.235  Sum_probs=43.5

Q ss_pred             HHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             4315311-015889988657677889999985001565124688778889999999987325777640379989989999
Q gi|254780967|r  236 GIYQLGN-LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASF  314 (398)
Q Consensus       236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (398)
                      +.|+.++ +.+..+........+.+.+.|.+.||+|+||....-+.....    ..+.    .+.....++...-.++|.
T Consensus        62 ~~yg~~~~~Ia~Lfv~GF~Ss~~fgt~vG~laD~~GRk~~cl~yc~~y~l----sClt----k~s~~~~vLllGRvLGGi  133 (354)
T pfam05631        62 SSYGFSKGDIGILFIAGFGSSMLFGTIVGSLADKQGRKRACLTYCILYIL----SCIT----KHSPNYKVLMIGRFLGGI  133 (354)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH----HHHH----HHCCCCHHHHHHHHHHHH
T ss_conf             97499899999999999888999998888888751740679999999999----9998----864640999999886128


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999998
Q gi|254780967|r  315 QFGLINSNFSSISM  328 (398)
Q Consensus       315 ~~~~~~~~~~~~~~  328 (398)
                      +.++.+...-+-..
T Consensus       134 sTSLLFSaFESWlV  147 (354)
T pfam05631       134 ATSLLFSAFESWLI  147 (354)
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             98888888999999


No 223
>pfam01733 Nucleoside_tran Nucleoside transporter. This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36, a protein of unknown function; although it has been hypothesized to be a plasma membrane nucleoside transporter.
Probab=96.24  E-value=0.051  Score=27.62  Aligned_cols=56  Identities=25%  Similarity=0.294  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             37998998999999999999999998534-6676999999999999999999999999
Q gi|254780967|r  303 LIFIAFFFLASFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQ  359 (398)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~  359 (398)
                      +.......+.++..|........+..+.. ++++..+..+.++ .-..|...|..++.
T Consensus       245 ~~~~i~~~lfglTNGyl~tl~m~~~P~~v~~~e~e~aG~~m~f-~L~~Gl~~Gs~ls~  301 (305)
T pfam01733       245 WLFIILMALFAFSNGYLSSLAMMYAPKQVPPHEAETAGMITVF-FLILGLALGSVFSF  301 (305)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHEECCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_conf             9999999999984218862113338998998999999999999-99999999999999


No 224
>KOG0637 consensus
Probab=95.76  E-value=0.033  Score=28.71  Aligned_cols=20  Identities=20%  Similarity=0.016  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999831179
Q gi|254780967|r  347 TVISTILGIIIGQSFNGTTY  366 (398)
Q Consensus       347 ~~~~~~~~~~~g~~~~~~~~  366 (398)
                      .+.+...+++......+...
T Consensus       458 vlvs~~~Gp~~~~~G~~~~~  477 (498)
T KOG0637         458 VLVSLGLGPLDQLFGGGNLP  477 (498)
T ss_pred             HEEECCCCHHHHHCCCCCHH
T ss_conf             03514531056651776426


No 225
>KOG3880 consensus
Probab=95.37  E-value=0.12  Score=25.57  Aligned_cols=129  Identities=12%  Similarity=0.057  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             99999999999999865082899999999999999985100110111002232100111111100012332100011112
Q gi|254780967|r   48 LIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAK  127 (398)
Q Consensus        48 ~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~  127 (398)
                      .+..-+-.+..-..-||+---.=......+.+.+.++.+++++.++=+.+-.+..++.|.....-.++-+ .+++.    
T Consensus        72 ilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~~----  146 (409)
T KOG3880          72 ILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RYPSI----  146 (409)
T ss_pred             HHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHC-CCCCC----
T ss_conf             2078999970312232156405899999997504289886041358876155564417864001333531-27773----


Q ss_pred             CCCCCCCEECCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             21223310001111111111222211--11110145678888877778887616788
Q gi|254780967|r  128 VLSIAMMIFMIMPILAPSIGQATVAL--SGGWIGIFVCMGVITTFITLWYYIRFPET  182 (398)
Q Consensus       128 ~~~~~~~~~~~g~~igp~ig~~l~~~--~~gWr~~f~~~~~~~~~~~~~~~~~~pet  182 (398)
                      .++.++.+.+.+..+|..- -..++.  ..+-|....+...+.++.....++.+|++
T Consensus       147 ~i~~WSSGTGgAGliGa~S-Ya~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p  202 (409)
T KOG3880         147 VIAGWSSGTGGAGLIGASS-YAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP  202 (409)
T ss_pred             EECCCCCCCCCCHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCC
T ss_conf             2222137888640553567-8887501179835677999988999999998522787


No 226
>pfam02487 CLN3 CLN3 protein. This is a family of proteins from the CLN3 gene. A missense mutation of glutamic acid (E) to lysine (K) at position 295 in the human protein has been implicated in Juvenile neuronal ceroid lipofuscinosis (Batten disease).
Probab=95.03  E-value=0.0089  Score=31.82  Aligned_cols=64  Identities=9%  Similarity=0.053  Sum_probs=34.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             776403799899899999999999999999853-46676999999999999999999999999983
Q gi|254780967|r  298 HPIHLLIFIAFFFLASFQFGLINSNFSSISMEP-FSHLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      ...+.+......+.-|...|..+.+......+. .+++|.-+.+..+ +....|...+.+++...+
T Consensus       338 fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~v~~~~rEFsmg~~s-vsds~GI~lAg~~~l~~e  402 (409)
T pfam02487       338 FTPSIWIVFLLILFEGLLGGASYVNTFHNIHKEVDPDVREFAMGAAS-ISDSLGVNLAALLALPLH  402 (409)
T ss_pred             HCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEHHEHHH-HHHHHHHHHHHHHHHHHH
T ss_conf             53519999999999874352677748898750298767130000024-353060999999875878


No 227
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2; InterPro: IPR005988    SV2 proteins are abundant synaptic vesicle proteins expressed in two major (SV2A and SV2B) and one minor isoform (SV2C) that resemble transporter proteins. SV2B knockout mice are phenotypically normal while SV2A- and SV2A/SV2B double knockout mice exhibit severe seizures and die postnatally. Without SV2 proteins, presynaptic Ca^2+ accumulation during consecutive action potentials causes abnormal increases in neurotransmitter release that destabilize synaptic circuits and induce epilepsy . ; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=92.51  E-value=0.058  Score=27.32  Aligned_cols=105  Identities=11%  Similarity=0.177  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86576778899999850015651246887788899999999873257776403799899899999999999999999853
Q gi|254780967|r  251 GGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSNFSSISMEP  330 (398)
Q Consensus       251 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      ..+....+..+...+.||.++.+..........+   .+......  ...... ........+.... .+........+.
T Consensus       604 g~~~~~pg~~~~~~~~~~~g~~~~~~g~~~~~~~---~c~~~~~g--~~~~~~-~~~~c~~~g~~~~-~w~~~~~~~~~~  676 (742)
T TIGR01299       604 GTLAVLPGNIVSALLLDKIGRLTLLGGSSVLSGV---SCFFLWFG--NSESAL-IGLLCLFGGLTIA-AWNALDVLTVEL  676 (742)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH---HHHHHCCC--CCHHHH-HHHHHHHCCCEEE-CCCCCEEEEEEE
T ss_conf             4444223046788877531002221012456544---43321026--622578-8777763452000-133210356652


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             46-676999999999999999999999999983
Q gi|254780967|r  331 FS-HLAGTASSIFGFINTVISTILGIIIGQSFN  362 (398)
Q Consensus       331 ~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~  362 (398)
                      +| +.+.++.+..+.+......+...+.+.+..
T Consensus       677 ~p~~~~~~~~g~~~~~c~~~~~~g~~~~~~~~~  709 (742)
T TIGR01299       677 YPTDKRATGFGFLNALCKLAAVLGNLIFGSLVG  709 (742)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             146431024567888888888876777665655


No 228
>KOG2601 consensus
Probab=92.04  E-value=0.52  Score=22.10  Aligned_cols=106  Identities=15%  Similarity=0.071  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHH------HHHHHCC------CCHHHHCCCCCCCCCCCCC--CCCCCHH--HHH
Q ss_conf             9999999986508289999999999999------9985100------1101110022321001111--1110001--233
Q gi|254780967|r   54 AQIFYGPLSDRFGRKIVMMFGLVIHIIS------TFIMVTI------NSFTGMLCMRLIQGIGGAA--PRIITIS--IIR  117 (398)
Q Consensus        54 ~~~~~G~l~Dr~Grr~~l~~g~~~~~i~------~~~~~~a------~~~~~l~~~r~l~G~g~~~--~~~~~~a--~i~  117 (398)
                      ..++.|...|+..|+|++...+.+--++      .+..-+.      .+++++..+-++.-.-++.  ....+.+  +-+
T Consensus        79 lg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~R  158 (503)
T KOG2601          79 LGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIER  158 (503)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
T ss_conf             57888887322158889988875333999998788764125122110356099999999999999999987521178604


Q ss_pred             HHH-------CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             210-------0011112212233100011111111112222111111014
Q gi|254780967|r  118 DIY-------DGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGI  160 (398)
Q Consensus       118 ~~~-------~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~  160 (398)
                      ||.       +++..++.++.+-..-.....++|.+-+.+++ +.+-|..
T Consensus       159 DWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iit-fvsl~~~  207 (503)
T KOG2601         159 DWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIIT-FVSLRAS  207 (503)
T ss_pred             CEEEEECCCCCHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCE-EECHHHH
T ss_conf             279996489987887530035530566641122555331020-4101321


No 229
>KOG4830 consensus
Probab=89.13  E-value=0.31  Score=23.31  Aligned_cols=44  Identities=20%  Similarity=0.259  Sum_probs=24.9

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHCCCHHHH
Q ss_conf             99998199988999999999999999999999999---------8650828999
Q gi|254780967|r   27 KISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPL---------SDRFGRKIVM   71 (398)
Q Consensus        27 ~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l---------~Dr~Grr~~l   71 (398)
                      ...++.+.++.+.+.+.++. .+.-++..++.|..         .||+|||+..
T Consensus        42 lfltqiglsp~~~AmlML~G-QVtda~st~ftGi~~d~nll~~~idr~G~~~~w   94 (412)
T KOG4830          42 LFLTQIGLSPSSRAMLMLIG-QVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW   94 (412)
T ss_pred             HHHHHHCCCCCHHHHHHHHH-HHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEE
T ss_conf             99998637830258998756-777787433001225455048886220434132


No 230
>TIGR00769 AAA ADP/ATP carrier protein family; InterPro: IPR004667   These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane.
Probab=88.10  E-value=1.2  Score=20.04  Aligned_cols=261  Identities=10%  Similarity=0.162  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             999999988657669999999999819998----8999999999999999-99999999986508289999999999999
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCLPKISDSLHLSN----ENYGQHLISFYLIGYG-IAQIFYGPLSDRFGRKIVMMFGLVIHIIS   81 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~lp~i~~~l~~s~----~~~~~~~~s~~~~~~~-i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~   81 (398)
                      |++|+++..+..++    |-++.|.|=+++    ++....+=+.-.+..+ +..++.++|+|++.|+.++..=..-+.+-
T Consensus        12 L~lm~FCi~fNYt~----Lrd~KD~LvVta~GsgAE~IPFLK~W~~vP~Avi~ml~Y~KL~~~L~k~alFY~v~~~Fl~f   87 (491)
T TIGR00769        12 LFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPSAVIFMLIYTKLSNILSKEALFYTVISPFLGF   87 (491)
T ss_pred             HHHHHHHHHHHHHH----HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
T ss_conf             89999999865687----62388678983589972102125574010258889999988851114332000105789999


Q ss_pred             HHHHHCC-----CCH--------------------------HHHCCCCCCCCCCCCC-CCCCCHHHHHHHHCCCCCCCCC
Q ss_conf             9985100-----110--------------------------1110022321001111-1110001233210001111221
Q gi|254780967|r   82 TFIMVTI-----NSF--------------------------TGMLCMRLIQGIGGAA-PRIITISIIRDIYDGRDMAKVL  129 (398)
Q Consensus        82 ~~~~~~a-----~~~--------------------------~~l~~~r~l~G~g~~~-~~~~~~a~i~~~~~~~~~~~~~  129 (398)
                      -.++++.     +.+                          |.+....++.=+=++. .+..--...+|..+-+|..|..
T Consensus        88 F~lF~~V~YP~~d~lHP~~~Ad~ll~~L~p~f~G~i~ilR~WsFa~FYv~aELWGSvvlSlLFWGfANqIT~i~EAKrFY  167 (491)
T TIGR00769        88 FALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFY  167 (491)
T ss_pred             HHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             85214875177765470058999998507764212454355889999999999999999998776305563211323245


Q ss_pred             CCCCCEECCCCCCCCCCCCCCCC-------C-CCCCCHHHHHHHH---HHHHHHHHHHHHCC----C-CCCH--------
Q ss_conf             22331000111111111122221-------1-1111014567888---88777788876167----8-8640--------
Q gi|254780967|r  130 SIAMMIFMIMPILAPSIGQATVA-------L-SGGWIGIFVCMGV---ITTFITLWYYIRFP----E-TLDP--------  185 (398)
Q Consensus       130 ~~~~~~~~~g~~igp~ig~~l~~-------~-~~gWr~~f~~~~~---~~~~~~~~~~~~~p----e-t~~~--------  185 (398)
                      ++.+.+-+++.+++.-+-.+...       . -.+|+..+.-+-.   ......++.+++..    | +.||        
T Consensus       168 ~LfG~GaN~al~~sG~~~~y~s~~r~~~yg~gvd~w~~~~~~l~~~~~~sg~~i~~~Y~w~nhltidtsiPPsr~Vl~~~  247 (491)
T TIGR00769       168 ALFGLGANVALIVSGRVIKYFSKLRASLYGEGVDGWHVSLLNLMAIVICSGLIIILLYRWINHLTIDTSIPPSRNVLTDP  247 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
T ss_conf             57878999999877789988630430233055152468888889999999999999963163301203588766557983


Q ss_pred             --------HHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHCCCCCCHHHHH----H
Q ss_conf             --------2210--11111123331000000000256777887631001468--887654554315311015889----9
Q gi|254780967|r  186 --------RDVR--PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFV--NSSQQIYVGIYQLGNLFPIAF----A  249 (398)
Q Consensus       186 --------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~  249 (398)
                              ++++  .++.-+..++++.+.++|.....++. ..+++......  .+-.. ..+.|...+.++..+    .
T Consensus       248 R~~~p~~lk~KK~g~KPk~~~~esl~~L~~S~Y~~~LA~L-V~aYGi~inLvEVtWKsk-lk~~yP~~~~Ys~fMG~f~~  325 (491)
T TIGR00769       248 RSYNPAELKEKKKGTKPKMSTMESLKFLVSSPYILDLALL-VIAYGISINLVEVTWKSK-LKEQYPSPNEYSAFMGNFST  325 (491)
T ss_pred             CCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH-HHHHCCEEEEEEEEEHHH-HCCCCCCHHHHHHHHHHHHH
T ss_conf             4479799860434678675188899986237128989999-875335788888644654-20316785577655422478


Q ss_pred             HHHHHHHHHHHHH-HHHHHCCCCCC
Q ss_conf             8865767788999-99850015651
Q gi|254780967|r  250 VGGFAMSIASFIN-SRLVEKFGIRR  273 (398)
Q Consensus       250 ~~~~~~~~~~~~~-~~l~~r~~~~~  273 (398)
                      ..++......++. +...+|+|-..
T Consensus       326 ~~Gvv~~~~mLl~~~~v~~K~GW~~  350 (491)
T TIGR00769       326 LTGVVSVLMMLLSGGNVIRKYGWLV  350 (491)
T ss_pred             HHHHHHHHHHHHHCCCEEEECHHHH
T ss_conf             9999999999983562353110122


No 231
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.52  E-value=1.7  Score=19.24  Aligned_cols=30  Identities=17%  Similarity=0.159  Sum_probs=13.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             769999999999999999999999999831
Q gi|254780967|r  334 LAGTASSIFGFINTVISTILGIIIGQSFNG  363 (398)
Q Consensus       334 ~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~  363 (398)
                      .++.++++--...++.|.+.+..+|++.|+
T Consensus        39 ~k~~~~a~klssefIsGilVGa~iG~llD~   68 (116)
T COG5336          39 IKGYAQAFKLSSEFISGILVGAGIGWLLDK   68 (116)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             665410488999998788999999999997


No 232
>pfam07760 DUF1616 Protein of unknown function (DUF1616). This is a family of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=81.51  E-value=2.2  Score=18.69  Aligned_cols=80  Identities=18%  Similarity=0.197  Sum_probs=43.6

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC-CCCCHHHH--HHHHHHHHHH
Q ss_conf             02232100111111100012332100011112212233100011111111112222111-11101456--7888887777
Q gi|254780967|r   96 CMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALS-GGWIGIFV--CMGVITTFIT  172 (398)
Q Consensus        96 ~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~-~gWr~~f~--~~~~~~~~~~  172 (398)
                      ..|.+.|+-. .....++++++-.||.++.-...-....+++++.++.|++|-. ++.. +|-|..-.  ..+.+.+++.
T Consensus        25 ~lR~~lglp~-VLf~PGYaliaaLfP~~~~l~~ieR~aLS~glSiaivpliGl~-ln~t~wgirl~pilisl~~ftl~~~  102 (278)
T pfam07760        25 PLRVLLGLPL-VLFIPGYALIAALFPARDDLDGIERAALSVGLSIAIVPLIGLG-LNYTPWGIRLAPILISLSAFTLIFC  102 (278)
T ss_pred             HHHHHHHHHH-HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE-EEECCCCCEECCHHHHHHHHHHHHH
T ss_conf             6999987588-5103759988867478678866787787877887998755117-8403342141209999999999999


Q ss_pred             HHHHH
Q ss_conf             88876
Q gi|254780967|r  173 LWYYI  177 (398)
Q Consensus       173 ~~~~~  177 (398)
                      +....
T Consensus       103 ~~A~~  107 (278)
T pfam07760       103 LVAYY  107 (278)
T ss_pred             HHHHH
T ss_conf             99998


No 233
>KOG3097 consensus
Probab=80.65  E-value=2.7  Score=18.12  Aligned_cols=92  Identities=10%  Similarity=0.083  Sum_probs=61.1

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
Q ss_conf             99999981999889999999999999999999999998650828999999999999999851001101110022321001
Q gi|254780967|r   25 LPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIG  104 (398)
Q Consensus        25 lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g  104 (398)
                      +-.++...+.+..++. + ... -.....+.++.+.+..++|-|..+..+...+...- ..=+-+.++.++-.-...|++
T Consensus        48 l~nlq~~vn~~lg~~s-l-~~~-y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~a  123 (390)
T KOG3097          48 LQNLQTSVNYDLGTVS-L-GAL-YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMA  123 (390)
T ss_pred             HHHHHHHHHCCCCCCH-H-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHCCHHHHHCCC
T ss_conf             9999999714756400-1-331-07787787889999999716999999998888888-730224677524077761256


Q ss_pred             CCCCCCCCHHHHHHHH
Q ss_conf             1111110001233210
Q gi|254780967|r  105 GAAPRIITISIIRDIY  120 (398)
Q Consensus       105 ~~~~~~~~~a~i~~~~  120 (398)
                      .+..+..--+++++.-
T Consensus       124 a~p~W~SkgtYlT~~g  139 (390)
T KOG3097         124 AGPIWASKGTYLTPMG  139 (390)
T ss_pred             CCCCCCCCCCEECHHH
T ss_conf             4665546751642777


No 234
>KOG1479 consensus
Probab=80.17  E-value=2.8  Score=18.03  Aligned_cols=58  Identities=17%  Similarity=0.168  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             37998998999999999999999998534-667699999999999999999999999998
Q gi|254780967|r  303 LIFIAFFFLASFQFGLINSNFSSISMEPF-SHLAGTASSIFGFINTVISTILGIIIGQSF  361 (398)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~a~~l~~~~~~~~~~~~~~~~g~~~  361 (398)
                      +..+......++..|........++.+.. |+++-.+..+. .+...+|...|...+++.
T Consensus       344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m-~~fl~~Gl~~G~~~s~l~  402 (406)
T KOG1479         344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLM-VFFLVGGLALGSLLSWVF  402 (406)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_conf             69999999998624468661032168888968999999999-999999999814999999


No 235
>pfam03741 TerC Integral membrane protein TerC family. This family contains a number of integral membrane proteins that also contains the TerC protein. TerC has been implicated in resistance to tellurium. This protein may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of the group of clinical isolates for antibiotics and heavy metal ion resistance. Determinant of the tellurite resistance of the strain was located on a large conjugative plasmid. Analyses showed, the genes terB, terC, terD and terE are essential for conservation of the resistance. The members of the family contain a number of conserved aspartates that could be involved in binding to metal ions.
Probab=56.31  E-value=9.8  Score=15.05  Aligned_cols=18  Identities=22%  Similarity=0.209  Sum_probs=10.5

Q ss_pred             CHHHHHHHHCCCCCCCCC
Q ss_conf             001233210001111221
Q gi|254780967|r  112 TISIIRDIYDGRDMAKVL  129 (398)
Q Consensus       112 ~~a~i~~~~~~~~~~~~~  129 (398)
                      ..+++.+..|+++|.|+.
T Consensus        17 vial~~~~lP~~~r~~al   34 (184)
T pfam03741        17 VIALIFRKLPPEQQKKAL   34 (184)
T ss_pred             HHHHHHHHCCHHHHHHHH
T ss_conf             999998048999999999


No 236
>PRK10580 proY putative proline-specific permease; Provisional
Probab=47.01  E-value=14  Score=14.21  Aligned_cols=22  Identities=5%  Similarity=0.039  Sum_probs=11.8

Q ss_pred             HHHHHHHHHHHCCHHHHHHHCC
Q ss_conf             9999999999422000343069
Q gi|254780967|r  377 VSSFICILIVEKNQMFRKTELR  398 (398)
Q Consensus       377 ~~~~~~~~~~~~~~~~r~~~~r  398 (398)
                      +..........|||.+|.+|-+
T Consensus       436 ~i~~~~~y~~~~r~~r~~~~~~  457 (457)
T PRK10580        436 IVLLLIGWMFKRRHDRQLAENQ  457 (457)
T ss_pred             HHHHHHHHHHHCCCCCHHHCCC
T ss_conf             9999999986110222220239


No 237
>TIGR00804 nupC nucleoside transporter, NupC family; InterPro: IPR008276   Nucleosides are hydrophilic molecules and require specialised transport proteins for permeation of cell membranes. There are two types of nucleoside transport processes: equilibrative bidirectional processes driven by chemical gradients and inwardly directed concentrative processes driven by an electrochemical gradient .   This entry represents a family of Concentrative Nucleoside Transporter (CNT) proteins found in bacteria and eukaryotes. So far, the members found in microorganisms such as bacteria and fungi are H+ symporters, while the mammalian members are Na+ symporters.   The microbial proteins include broad specificity transporters, such as the Escherichia coli NupC protein which transports all nucleosides (both ribo- and deoxyribonucleosides) except hypoxanthine and guanine nucleosides . Other proteins have higher specificity, like the Bacillus subtilis NupC transporter which is specific for pyrimidine nucleosides (cytidine and uridine and the corresponding deoxyribonucleosides). A recently characterised fungal protein, the first transporter of this type to be described in eukaryotes, exhibited transport activity for adenosine, uridine, inosine and guanosine but not cytidine, thymidine or the nucleobase hypoxanthine .   The characterised mammalian proteins can be divided into three subgroups; CNT1, CNT2 and CNT3 . CNT1 preferentially transports pyrimidines and weakly transports adenosine. Several antiviral and anticancer nucleoside analogues, including AZT and dFdC are also substrates for CNT1. CNT2 selectively transports purines, and the human form has also been shown to facilitate the uptake of some antiviral compounds including ddI and ribavirin. CNT3 has a broader specificity, transporting both purines and pyrimidines. Several anticancer nucleoside analogues such as CdA, dFdC and FdU are also transported by CNT3. Substrate specificity appears to depend on a region containing transmembrane regions 7, 8 and 9. Mutation of just four residues in this region was sufficient to convert the activity of human CNT1 to that of CNT2. At least three other concentrative nucleoside transport activities have been described in mammalian cells, but the proteins responsible for these activities have not yet been identified.; GO: 0005415 nucleoside:sodium symporter activity, 0006810 transport, 0016020 membrane.
Probab=45.36  E-value=10  Score=14.96  Aligned_cols=87  Identities=9%  Similarity=0.141  Sum_probs=39.2

Q ss_pred             HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHH-HHHHHHCCCCCCHHHHCCCC
Q ss_conf             23321000111122122331000111111111122221111110145678888-87777-88876167886402210111
Q gi|254780967|r  115 IIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVI-TTFIT-LWYYIRFPETLDPRDVRPLN  192 (398)
Q Consensus       115 ~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~-~~~~~-~~~~~~~pet~~~~~~~~~~  192 (398)
                      .+++.-++=.+.+.++....  +.+.+-|+.+|++. +  .|=...+.+.+.+ ...+. +..-+..||+.+.+++++.+
T Consensus       157 ~ikpyL~~mt~self~~~~~--Gma~iaGsv~gaY~-~--mG~~~~Yl~aAs~l~ap~~L~~akl~~P~~e~~~~~~~~~  231 (425)
T TIGR00804       157 VIKPYLGKMTDSELFTVMTS--GMATIAGSVLGAYA-S--MGVPATYLIAASVLAAPGGLAFAKLIYPETEESKEKSEED  231 (425)
T ss_pred             HHHHHHHHHCHHHHHHHHHH--HHHHHHHHHHHHHH-H--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
T ss_conf             99999874144698999997--34666899999998-7--3888989999999998999999863267534411022102


Q ss_pred             CCCCC---CCCCCCCCC
Q ss_conf             11123---331000000
Q gi|254780967|r  193 LYAIL---HSFSLIFKH  206 (398)
Q Consensus       193 ~~~~~---~~~~~~~~~  206 (398)
                      .+...   +++-+...+
T Consensus       232 ~~~e~~~~~~f~Ea~~~  248 (425)
T TIGR00804       232 VKLEEGDEKNFFEALSN  248 (425)
T ss_pred             CCCCCCCCCCHHHHHHH
T ss_conf             66777754687999999


No 238
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=43.55  E-value=16  Score=13.90  Aligned_cols=21  Identities=29%  Similarity=0.230  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCCC
Q ss_conf             865767788999998500156
Q gi|254780967|r  251 GGFAMSIASFINSRLVEKFGI  271 (398)
Q Consensus       251 ~~~~~~~~~~~~~~l~~r~~~  271 (398)
                      .-++..++.++.|++.||..+
T Consensus        91 yL~gfi~aa~l~G~l~~k~~~  111 (184)
T COG1268          91 YLIGFIIAAFLIGLLAEKIRK  111 (184)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC
T ss_conf             899999999999999986402


No 239
>PRK10323 neutral amino-acid efflux protein; Provisional
Probab=41.46  E-value=17  Score=13.71  Aligned_cols=18  Identities=39%  Similarity=0.534  Sum_probs=7.8

Q ss_pred             CCCCCCCCCCCHHHHHHH
Q ss_conf             333100000000025677
Q gi|254780967|r  197 LHSFSLIFKHRASTLYNI  214 (398)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~  214 (398)
                      ++...--+-||+.|...+
T Consensus       108 ~~g~~~Q~lNPKa~l~~~  125 (195)
T PRK10323        108 WASFALQFVNVKIILYGI  125 (195)
T ss_pred             HHHHHHHHHCHHHHHHHH
T ss_conf             999999973799999999


No 240
>TIGR00427 TIGR00427 conserved hypothetical protein TIGR00427; InterPro: IPR002771   Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. .
Probab=39.38  E-value=19  Score=13.53  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=32.1

Q ss_pred             CHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             00123321000111122122331000111111111122221111110-145678888877778887616788640221
Q gi|254780967|r  112 TISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWI-GIFVCMGVITTFITLWYYIRFPETLDPRDV  188 (398)
Q Consensus       112 ~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr-~~f~~~~~~~~~~~~~~~~~~pet~~~~~~  188 (398)
                      -.--++|.||+++|.+..-.......+--.+--..|..++. ++|=. -.|-+.|.+-++...+-...-||++.++++
T Consensus        29 iFi~LTe~y~~~~R~~i~kkA~I~~~~IL~~f~~fG~~Il~-~FGIsIdafriAGGILlf~Ia~dml~gK~~~~~~~k  105 (206)
T TIGR00427        29 IFISLTESYTAEEREKIAKKAVISAFVILLIFLLFGDLILK-YFGISIDAFRIAGGILLFLIALDMLSGKESEKKKHK  105 (206)
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
T ss_conf             22114888877899999899999999999999987457886-608727898998899999999999840255045204


No 241
>pfam07099 DUF1361 Protein of unknown function (DUF1361). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=35.21  E-value=22  Score=13.15  Aligned_cols=14  Identities=7%  Similarity=0.261  Sum_probs=5.9

Q ss_pred             HHHHHHHHHHHCCC
Q ss_conf             88876545543153
Q gi|254780967|r  227 VNSSQQIYVGIYQL  240 (398)
Q Consensus       227 ~~~~~~~~~~~~~~  240 (398)
                      .-.+|++..|..+.
T Consensus        39 ~PNApY~lTDliHL   52 (169)
T pfam07099        39 LPNAPYMLTDLIHL   52 (169)
T ss_pred             CCCCCHHHHHHHHH
T ss_conf             68862999999998


No 242
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=33.58  E-value=23  Score=13.00  Aligned_cols=12  Identities=8%  Similarity=0.407  Sum_probs=4.3

Q ss_pred             CCHHHHHHHHHH
Q ss_conf             828999999999
Q gi|254780967|r   66 GRKIVMMFGLVI   77 (398)
Q Consensus        66 Grr~~l~~g~~~   77 (398)
                      ++..+++.|+..
T Consensus        30 ~~~~Il~~Gla~   41 (225)
T cd02434          30 SPFVILIIGFAN   41 (225)
T ss_pred             CCCHHHHHHHHH
T ss_conf             830779999999


No 243
>pfam02632 BioY BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.
Probab=32.65  E-value=24  Score=12.91  Aligned_cols=24  Identities=29%  Similarity=0.490  Sum_probs=15.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf             865767788999998500156512
Q gi|254780967|r  251 GGFAMSIASFINSRLVEKFGIRRV  274 (398)
Q Consensus       251 ~~~~~~~~~~~~~~l~~r~~~~~~  274 (398)
                      ..++..+..++.+++.+|..+++.
T Consensus        62 yliGf~~aa~i~g~~~~~~~~~~~   85 (148)
T pfam02632        62 YLIGFLLAAFVIGLLAERFGRKRL   85 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf             999999999999999986344419


No 244
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666; InterPro: IPR010019   This entry identifies a clade of sequences from gamma and beta proteobacteria. These proteins are more than 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from Escherichia coli has been annotated as yccS..
Probab=32.35  E-value=24  Score=12.88  Aligned_cols=47  Identities=17%  Similarity=0.224  Sum_probs=32.8

Q ss_pred             HHHHHHHH---HC-CCHHHHHHHHHHHHHHHHHH-HCCCCHHHHCCCCCCCC
Q ss_conf             99999986---50-82899999999999999985-10011011100223210
Q gi|254780967|r   56 IFYGPLSD---RF-GRKIVMMFGLVIHIISTFIM-VTINSFTGMLCMRLIQG  102 (398)
Q Consensus        56 ~~~G~l~D---r~-Grr~~l~~g~~~~~i~~~~~-~~a~~~~~l~~~r~l~G  102 (398)
                      ++.|.|+|   |+ ||=|-+++.++++.+++... -.-+..|.+.++-++.-
T Consensus        41 ~iAaaL~DlDdRl~GRLkn~i~TLicF~Iasfsvellf~~Pwlfa~glt~st   92 (713)
T TIGR01666        41 VIAAALVDLDDRLAGRLKNVILTLICFAIASFSVELLFGKPWLFAVGLTVST   92 (713)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             9998751301012114899999999999999999998446499999999999


No 245
>pfam09930 DUF2162 Predicted transporter (DUF2162). Members of this family of bacterial proteins are thought to be membrane transporters, but their exact function has not, as yet, been elucidated.
Probab=28.77  E-value=28  Score=12.53  Aligned_cols=13  Identities=15%  Similarity=0.335  Sum_probs=5.1

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             3466769999999
Q gi|254780967|r  330 PFSHLAGTASSIF  342 (398)
Q Consensus       330 ~~~~~~G~a~~l~  342 (398)
                      +.|..-|.++=+.
T Consensus       162 ~~P~~LG~~Mi~l  174 (228)
T pfam09930       162 PYPITLGNFMIFL  174 (228)
T ss_pred             CCHHHHHHHHHHH
T ss_conf             9845888899999


No 246
>pfam02990 EMP70 Endomembrane protein 70.
Probab=27.79  E-value=29  Score=12.43  Aligned_cols=35  Identities=14%  Similarity=0.255  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             58899886576778899999850015651246887
Q gi|254780967|r  245 PIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSL  279 (398)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~  279 (398)
                      ........+...++++.++++-+.++.++..+...
T Consensus       297 t~~i~~y~~~~~~aGY~s~~lyk~~~g~~W~~~~~  331 (518)
T pfam02990       297 TAAIVLYALTGFVAGYVSARLYKTFKGKKWKRNLI  331 (518)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             99999999973568999999999808850799999


No 247
>pfam02554 CstA Carbon starvation protein CstA. This family consists of Carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilisation.
Probab=25.40  E-value=33  Score=12.18  Aligned_cols=40  Identities=18%  Similarity=0.257  Sum_probs=20.2

Q ss_pred             HHHCCCCCCCCCCCC-CCEECCCCCCCCCCCCCCCCCCCCCC-HHHHH
Q ss_conf             210001111221223-31000111111111122221111110-14567
Q gi|254780967|r  118 DIYDGRDMAKVLSIA-MMIFMIMPILAPSIGQATVALSGGWI-GIFVC  163 (398)
Q Consensus       118 ~~~~~~~~~~~~~~~-~~~~~~g~~igp~ig~~l~~~~~gWr-~~f~~  163 (398)
                      |..|.+ +-+.++.. ...-+.|+++||.++.     .+||- ...|+
T Consensus        48 DYVPt~-~~vlfghhF~sIAGaGPIvGPi~Aa-----~~GwlPa~LWI   89 (382)
T pfam02554        48 DYVPTN-KWVLFGHHFASIAGAGPIVGPILAA-----QFGWLPALLWI   89 (382)
T ss_pred             CCCCCC-CCEEHHHHHHHHHCCCCCHHHHHHH-----HHCCHHHHHHH
T ss_conf             600078-4321497887761666537899999-----96404888998


No 248
>pfam03616 Glt_symporter Sodium/glutamate symporter.
Probab=24.41  E-value=34  Score=12.08  Aligned_cols=15  Identities=7%  Similarity=0.306  Sum_probs=6.9

Q ss_pred             HHHCCCHHHHHHHHH
Q ss_conf             981999889999999
Q gi|254780967|r   30 DSLHLSNENYGQHLI   44 (398)
Q Consensus        30 ~~l~~s~~~~~~~~~   44 (398)
                      +++.++++-+|.++.
T Consensus        30 ~~~~IP~pViGGll~   44 (368)
T pfam03616        30 KKFNIPEPVVGGLIV   44 (368)
T ss_pred             HHCCCCHHHHHHHHH
T ss_conf             870896567999999


No 249
>pfam11298 DUF3099 Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.28  E-value=34  Score=12.06  Aligned_cols=31  Identities=13%  Similarity=0.217  Sum_probs=17.1

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             8650828999999999999999851001101
Q gi|254780967|r   62 SDRFGRKIVMMFGLVIHIISTFIMVTINSFT   92 (398)
Q Consensus        62 ~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~   92 (398)
                      -|+-+|++-+.+...+-..+.+++++..+.+
T Consensus        11 ~d~~~R~rrY~i~M~~R~~c~vla~~~~~~~   41 (73)
T pfam11298        11 EDRRHRMRKYVVLMAVRIVCLILAAVVYGLG   41 (73)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             8998789999999999999999999980207


No 250
>COG1288 Predicted membrane protein [Function unknown]
Probab=23.09  E-value=36  Score=11.93  Aligned_cols=53  Identities=13%  Similarity=0.172  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             01111221223310001111111111222211111101456788888777788876
Q gi|254780967|r  122 GRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYI  177 (398)
Q Consensus       122 ~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~~~~~~~~~~~~~~~  177 (398)
                      ..+-+.+.|..   +..+..++.-+++.-..+..+||...|+......+..+..+-
T Consensus       186 gt~iG~~~St~---NPF~~~IAq~iAGip~~sG~~~Riv~~iv~~~~~i~y~~~Ya  238 (481)
T COG1288         186 GTQIGFAASTM---NPFATVIAQNIAGIPFLSGMGLRIVVWVVFTLISIIYVYWYA  238 (481)
T ss_pred             HHCCCHHHHHC---CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             71200244415---835889877521786335626799999999999999999999


No 251
>pfam12273 RCR Chitin synthesis regulation, resistance to Congo red. RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5.
Probab=21.99  E-value=38  Score=11.82  Aligned_cols=22  Identities=14%  Similarity=0.248  Sum_probs=11.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             0145678888877778887616
Q gi|254780967|r  158 IGIFVCMGVITTFITLWYYIRF  179 (398)
Q Consensus       158 r~~f~~~~~~~~~~~~~~~~~~  179 (398)
                      ||+++.+.++.++++++....+
T Consensus         1 RWv~fav~i~~~~i~~f~~~~~   22 (124)
T pfam12273         1 RWVLFAIFIIALLILFFLTARI   22 (124)
T ss_pred             CEEEHHHHHHHHHHHHHHHHHH
T ss_conf             9110899999999999999987


No 252
>pfam09911 DUF2140 Uncharacterized protein conserved in bacteria (DUF2140). This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=21.72  E-value=39  Score=11.77  Aligned_cols=19  Identities=11%  Similarity=0.095  Sum_probs=11.3

Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q ss_conf             1101456788888777788
Q gi|254780967|r  156 GWIGIFVCMGVITTFITLW  174 (398)
Q Consensus       156 gWr~~f~~~~~~~~~~~~~  174 (398)
                      -|.|.|+++..+.++....
T Consensus         2 ~WKwaF~~Llal~l~~~~~   20 (187)
T pfam09911         2 KWKWAFFVLLALNLASIAV   20 (187)
T ss_pred             HHHHHHHHHHHHHHHHHHE
T ss_conf             0899999999999999712


No 253
>PRK02237 hypothetical protein; Provisional
Probab=21.41  E-value=39  Score=11.73  Aligned_cols=39  Identities=18%  Similarity=0.092  Sum_probs=26.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             015889988657677889999985001565124688778
Q gi|254780967|r  243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLI  281 (398)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~  281 (398)
                      .++-.++..+-..++.+++-++.+|+..+++....+..+
T Consensus        56 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v   94 (108)
T PRK02237         56 AFGRVYAAYGGVYIAGSLLWLWVVDGVRPDRWDWIGAAI   94 (108)
T ss_pred             CCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             120089985229999999999997488997558986999


Done!