HHsearch alignment for GI: 254780967 and conserved domain: pfam01306

>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=99.95  E-value=1.1e-23  Score=147.15  Aligned_cols=352  Identities=13%  Similarity=0.077  Sum_probs=212.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHH-H
Q ss_conf             9999999886576699999999998-1999889999999999999999999999998650828999999999--9999-9
Q gi|254780967|r    7 IAMLMAINSLGIDIILPCLPKISDS-LHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVI--HIIS-T   82 (398)
Q Consensus         7 l~~~~~~~~~~~~~~~p~lp~i~~~-l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~--~~i~-~   82 (398)
T Consensus        12 ls~~yf~yF~~~g~~~pf~~lwL~~~~Gls~~~IG-il~s~~~~~~il~qp~~G~lsDk~g~rk~ll~~i~~~l~l~~~f   90 (413)
T pfam01306        12 FGLFFFFYFFIMSAYFPFFPIWLHDVNHLSKTDTG-IVFSCISLFSILFQPLFGLISDKLGLRKHLLWCITGLLVLFAPF   90 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999998999997775798999999-99999999999982789986034455018999999999999999


Q ss_pred             HHHHCCC----CHHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9851001----1011-1002232100111111100012332100011112212233100011111111112222111111
Q gi|254780967|r   83 FIMVTIN----SFTG-MLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGW  157 (398)
Q Consensus        83 ~~~~~a~----~~~~-l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gW  157 (398)
T Consensus        91 fi~~~~pll~~~~~l~~lv~~i~~~~~~~~~~pl~ea~~~~~sr--~~~~~YGriRlwGSiGfai~a~~~G~l~~~~--p  166 (413)
T pfam01306        91 FIYVFGPLLQSNILVGAIVGGVYLGFVFSAGAGAIEAYIEKVSR--RSNFEYGKARMFGCVGWALCASIAGILFSID--P  166 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--C
T ss_conf             99999789899999999999999999985542799999999987--6377421368899999999999867887528--5


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH----HHHH
Q ss_conf             014567888887777888761678864022101----11111233310000000002567778876310014----6888
Q gi|254780967|r  158 IGIFVCMGVITTFITLWYYIRFPETLDPRDVRP----LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILG----FVNS  229 (398)
Q Consensus       158 r~~f~~~~~~~~~~~~~~~~~~pet~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  229 (398)
T Consensus       167 ~~~f~~~s~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~v~g~~~~y~v~d~~f~~f  246 (413)
T pfam01306       167 QIVFWLGSGFALILALLLMFAKPDKSSSAIVADALGANKSAFSLRLALELFRMPKFWVFVLYVVGVACVYDVFDQQFANF  246 (413)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             28999999999999999998078764102331010124577647779999615479999999999999988777778999


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             76545543153110158899886576778899999850015651246887788899999999873257776403799899
Q gi|254780967|r  230 SQQIYVGIYQLGNLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF  309 (398)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
T Consensus       247 ~~~~~~~~~~g~~~~G~l~s~~v~~E~~~m~~~~~l~~R~G~k~~Llla~~i~~iR~~---~~~----~~~~~~~ii~~q  319 (413)
T pfam01306       247 FTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIL---GSS----FATTALEVVILK  319 (413)
T ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHH----CCCCHHHHHHHH
T ss_conf             9999634276843121999999999999999989999870839899999999999999---974----323069999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999999999999985346-6769999999999-9999999999999998311799999
Q gi|254780967|r  310 FLASFQFGLINSNFSSISMEPFS-HLAGTASSIFGFI-NTVISTILGIIIGQSFNGTTYPITI  370 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~-~~~G~a~~l~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~  370 (398)
T Consensus       320 lLH~~t~~l~~va~~kyI~~~f~~rl~aT~~~v~~~~~~g~~~~i~s~~~G~l~D~~G~~~ty  382 (413)
T pfam01306       320 MLHMFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFSKQLAMILLSTLAGIMYDSIGFQGAY  382 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999989999999999999986793022149999999999888998611288899970378999