HHsearch alignment for GI: 254780967 and conserved domain: pfam01770
>pfam01770 Folate_carrier Reduced folate carrier. The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy, such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules.
Probab=99.33 E-value=5.7e-11 Score=77.01 Aligned_cols=310 Identities=13% Similarity=0.118 Sum_probs=175.5
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC
Q ss_conf 98199988999999999999999999999999865082899999999999999985100110111002232100111111
Q gi|254780967|r 30 DSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPR 109 (398)
Q Consensus 30 ~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~~~l~~~r~l~G~g~~~~~ 109 (398)
T Consensus 33 ~~kN~T~~qv~neIyPv~TYSyl~~Lv~vfLlTD~lrYKPviil~~l~~i~~~~lLl~~~sl~~mQ~~e~fYG~~~Aa-E 111 (410)
T pfam01770 33 PDKNITQEQVNNEVYPVWTYSYLALLVPVFLLTDYLRYKPVIILQGLAGIVTWLLLLFTTSVIAMQVMEFFYGVATAA-E 111 (410)
T ss_pred CCCCCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-H
T ss_conf 867989899706000101898999999999999997204999998899999999999826399999999999988887-7
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH---
Q ss_conf 10001233210001111221223310001111111111222211-11110145678888877778887616788640---
Q gi|254780967|r 110 IITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVAL-SGGWIGIFVCMGVITTFITLWYYIRFPETLDP--- 185 (398)
Q Consensus 110 ~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~-~~gWr~~f~~~~~~~~~~~~~~~~~~pet~~~--- 185 (398)
T Consensus 112 vAYysYIYs~Vd~~~YQkvTsy~Raa~L~G~~~s~vlgQllvs~~~~~y~~Ln~ISl-~~~~~a~~~a~fLP~v~~Sl~F 190 (410)
T pfam01770 112 VAYYSYIYSKVDPERYQRVTSYTRAATLVGKFLSGVLGQLLVSLGRVSYFTLNYISL-ASQVVALFLSLFLPRPKRSLFF 190 (410)
T ss_pred HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCEE
T ss_conf 755402467438554156989999999999999888877831347777788879879-9999999999957999842111
Q ss_pred -----------HHH-------C---------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf -----------221-------0---------------1111112333100000000025677788763100146888765
Q gi|254780967|r 186 -----------RDV-------R---------------PLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQ 232 (398)
Q Consensus 186 -----------~~~-------~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (398)
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ysn~~vl~WSlWwa~at~gy~qV~~YvQ~ 270 (410)
T pfam01770 191 HRKSEADDTESESNVMEEGSENGGLTAESGGLEKFSRLSVLRLLWYHLKSCYSNPLLLYWSLWWAFATAGYYQVVNYVQN 270 (410)
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15674335776554334566666544455443422588999999999999847885112239999987389999999999
Q ss_pred HHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 455431531---10158899886576778899999850015651246887788899999999873257776403799899
Q gi|254780967|r 233 IYVGIYQLG---NLFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFF 309 (398)
Q Consensus 233 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (398)
T Consensus 271 LW~~v~~~~~~~~yNG~VeA~~TllgA~~a~~~G~v~~~w~~--~gel~l~~~S~~~~~ll~~m---~~t~~Iw~~Y~~y 345 (410)
T pfam01770 271 LWKHVEPSDKSSIYNGGVEAASTLLGAVAAFAAGYLKVRWNR--WGELLLAVFSALQAGLLFLM---GFTRNIWVCYVGY 345 (410)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHHHHHHHHHH---HHHCCHHHHHHHH
T ss_conf 999845778742005399999999999999987761576478--89999999999999999999---8635189999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 899999999999999999853-4667699999999999
Q gi|254780967|r 310 FLASFQFGLINSNFSSISMEP-FSHLAGTASSIFGFIN 346 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-~~~~~G~a~~l~~~~~ 346 (398)
T Consensus 346 Iif~~~Y~fliTIA~~qiA~~L~~~~yaLVFGiNtfvA 383 (410)
T pfam01770 346 VLFRASYMFLITIATFQIAANLSMERYALVFGINTFVA 383 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHH
T ss_conf 99999999999999999998516463366675588999