HHsearch alignment for GI: 254780967 and conserved domain: pfam03137
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=99.84 E-value=7.3e-20 Score=126.02 Aligned_cols=269 Identities=18% Similarity=0.266 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 999999999988657669-9999999998199988999999999999999999999999865082899999999999999
Q gi|254780967|r 4 VIVIAMLMAINSLGIDII-LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST 82 (398)
Q Consensus 4 i~~l~~~~~~~~~~~~~~-~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 82 (398)
T Consensus 5 l~~l~~~~~~Q~~-v~gy~~~~ittiEkRF~l~S~~~G-~I~s~~di~~~i~~~~vsy~G~~~hrprwig~G~~l~~lG~ 82 (582)
T pfam03137 5 LLLLGLAALLQLL-VNGYFKSSITTIEKRFKISSSISG-IISSSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLLIMALGS 82 (582)
T ss_pred HHHHHHHHHHHHH-HHHHHHEEHHHHHHHCCCCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
T ss_conf 6899999999999-877321002112443699832112-34429779999999999971752787611009899999999
Q ss_pred HHHHCCC------------------------------------------------CHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf 9851001------------------------------------------------1011100223210011111110001
Q gi|254780967|r 83 FIMVTIN------------------------------------------------SFTGMLCMRLIQGIGGAAPRIITIS 114 (398)
Q Consensus 83 ~~~~~a~------------------------------------------------~~~~l~~~r~l~G~g~~~~~~~~~a 114 (398)
T Consensus 83 ~l~alPhFl~g~y~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~q~l~GiG~tp~~tLG~t 162 (582)
T pfam03137 83 LLTALPHFLYGPYSYESTNLTGSNESSNSTLCHGGALIPSPCQSEGCCHKEGTSLMWLLFFVAQLLRGIGATPIFTLGIS 162 (582)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCH
T ss_conf 99976786068861353445556667775334688877665665332357652089999999999851546741303611
Q ss_pred HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-----------------CCHH----HHHHHHHHHHHHH
Q ss_conf 233210001111221223310001111111111222211111-----------------1014----5678888877778
Q gi|254780967|r 115 IIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-----------------WIGI----FVCMGVITTFITL 173 (398)
Q Consensus 115 ~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-----------------Wr~~----f~~~~~~~~~~~~ 173 (398)
T Consensus 163 YiDdnv~~~~s~~Yigi~~~~~~lGP~~Gf~lg~~~L~~yvd~~~~~~~~~~i~~~dprWvGAWWLGfli~g~~~~~~ai 242 (582)
T pfam03137 163 YIDDNVKSKNSPLYLGILFTLAMFGPAIGFLLGSFCLRLYVDFGRVPTEDVIITPTDPRWVGAWWLGFLVCGGLLLLSAI 242 (582)
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 43167774557199999999987646899999998885001556688654667878814777888899999999999999
Q ss_pred HHHHHCCCCCCHHHHCC---------------------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
Q ss_conf 88761678864022101---------------------------111112333100000000025677788763100146
Q gi|254780967|r 174 WYYIRFPETLDPRDVRP---------------------------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGF 226 (398)
Q Consensus 174 ~~~~~~pet~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (398)
T Consensus 243 pl~-~FPk~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~Ll~N~~~m~~~l~~~~~~~~~~G~ 321 (582)
T pfam03137 243 PFF-FFPKELPKAGRLASLDLTRPKAKDETRKQAEEPKSGKSAPRFLKDFPKSLKRLLTNPTFMLVVLAQIFESSVIAGY 321 (582)
T ss_pred HHH-HCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 998-3851158403221122100233102232023333332011557789999999975919999999999999999889
Q ss_pred HHHHHHHHHHHCCCCCC-HHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 88876545543153110-1588998865-7677889999985001565124
Q gi|254780967|r 227 VNSSQQIYVGIYQLGNL-FPIAFAVGGF-AMSIASFINSRLVEKFGIRRVS 275 (398)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~ 275 (398)
T Consensus 322 ~tF~pKylE~qF~~sas~A~~l~G~i~vp~~~~G~llGG~ivkk~kl~~~~ 372 (582)
T pfam03137 322 STFLPKYLETQYGQSASYANFLTGVVALPAAAVGILIGGYIIKKFKLTARG 372 (582)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH
T ss_conf 887578889882887899999998788888899987543213220767899