HHsearch alignment for GI: 254780967 and conserved domain: pfam03137

>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=99.84  E-value=7.3e-20  Score=126.02  Aligned_cols=269  Identities=18%  Similarity=0.266  Sum_probs=190.9

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             999999999988657669-9999999998199988999999999999999999999999865082899999999999999
Q gi|254780967|r    4 VIVIAMLMAINSLGIDII-LPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIIST   82 (398)
Q Consensus         4 i~~l~~~~~~~~~~~~~~-~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~   82 (398)
T Consensus         5 l~~l~~~~~~Q~~-v~gy~~~~ittiEkRF~l~S~~~G-~I~s~~di~~~i~~~~vsy~G~~~hrprwig~G~~l~~lG~   82 (582)
T pfam03137         5 LLLLGLAALLQLL-VNGYFKSSITTIEKRFKISSSISG-IISSSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLLIMALGS   82 (582)
T ss_pred             HHHHHHHHHHHHH-HHHHHHEEHHHHHHHCCCCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
T ss_conf             6899999999999-877321002112443699832112-34429779999999999971752787611009899999999


Q ss_pred             HHHHCCC------------------------------------------------CHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf             9851001------------------------------------------------1011100223210011111110001
Q gi|254780967|r   83 FIMVTIN------------------------------------------------SFTGMLCMRLIQGIGGAAPRIITIS  114 (398)
Q Consensus        83 ~~~~~a~------------------------------------------------~~~~l~~~r~l~G~g~~~~~~~~~a  114 (398)
T Consensus        83 ~l~alPhFl~g~y~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~q~l~GiG~tp~~tLG~t  162 (582)
T pfam03137        83 LLTALPHFLYGPYSYESTNLTGSNESSNSTLCHGGALIPSPCQSEGCCHKEGTSLMWLLFFVAQLLRGIGATPIFTLGIS  162 (582)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCH
T ss_conf             99976786068861353445556667775334688877665665332357652089999999999851546741303611


Q ss_pred             HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC-----------------CCHH----HHHHHHHHHHHHH
Q ss_conf             233210001111221223310001111111111222211111-----------------1014----5678888877778
Q gi|254780967|r  115 IIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGG-----------------WIGI----FVCMGVITTFITL  173 (398)
Q Consensus       115 ~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~g-----------------Wr~~----f~~~~~~~~~~~~  173 (398)
T Consensus       163 YiDdnv~~~~s~~Yigi~~~~~~lGP~~Gf~lg~~~L~~yvd~~~~~~~~~~i~~~dprWvGAWWLGfli~g~~~~~~ai  242 (582)
T pfam03137       163 YIDDNVKSKNSPLYLGILFTLAMFGPAIGFLLGSFCLRLYVDFGRVPTEDVIITPTDPRWVGAWWLGFLVCGGLLLLSAI  242 (582)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             43167774557199999999987646899999998885001556688654667878814777888899999999999999


Q ss_pred             HHHHHCCCCCCHHHHCC---------------------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
Q ss_conf             88761678864022101---------------------------111112333100000000025677788763100146
Q gi|254780967|r  174 WYYIRFPETLDPRDVRP---------------------------LNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGF  226 (398)
Q Consensus       174 ~~~~~~pet~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (398)
T Consensus       243 pl~-~FPk~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~Ll~N~~~m~~~l~~~~~~~~~~G~  321 (582)
T pfam03137       243 PFF-FFPKELPKAGRLASLDLTRPKAKDETRKQAEEPKSGKSAPRFLKDFPKSLKRLLTNPTFMLVVLAQIFESSVIAGY  321 (582)
T ss_pred             HHH-HCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             998-3851158403221122100233102232023333332011557789999999975919999999999999999889


Q ss_pred             HHHHHHHHHHHCCCCCC-HHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             88876545543153110-1588998865-7677889999985001565124
Q gi|254780967|r  227 VNSSQQIYVGIYQLGNL-FPIAFAVGGF-AMSIASFINSRLVEKFGIRRVS  275 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~  275 (398)
T Consensus       322 ~tF~pKylE~qF~~sas~A~~l~G~i~vp~~~~G~llGG~ivkk~kl~~~~  372 (582)
T pfam03137       322 STFLPKYLETQYGQSASYANFLTGVVALPAAAVGILIGGYIIKKFKLTARG  372 (582)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH
T ss_conf             887578889882887899999998788888899987543213220767899