HHsearch alignment for GI: 254780967 and conserved domain: pfam05977
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=100.00 E-value=4.2e-31 Score=187.95 Aligned_cols=375 Identities=13% Similarity=0.049 Sum_probs=267.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 9999988657669999999999819998899999999999999999999999986508289999999999999998510-
Q gi|254780967|r 9 MLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVT- 87 (398)
Q Consensus 9 ~~~~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~- 87 (398)
T Consensus 17 ~a~lvS~~Gtwmq~VA~~Wlv~~lT~S~~~vg-lV~~a~~LP~~ll~l~aGvlADr~dRRr~ll~~q~~~~~~a~~La~l 95 (524)
T pfam05977 17 IASLVSNLGWLMQTVAASWLMTDISASPLMVA-LVQAAATLPIFLLSIPAGAIADNFDRRKVMLAGQLLMAIASALLTVL 95 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999876508999999-99999998899999999999982250899999999999999999999
Q ss_pred ----CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ----0110111002232100111111100012332100011112212233100011111111112222111111014567
Q gi|254780967|r 88 ----INSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDGRDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVC 163 (398)
Q Consensus 88 ----a~~~~~l~~~r~l~G~g~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~g~~igp~ig~~l~~~~~gWr~~f~~ 163 (398)
T Consensus 96 ~~~g~~~~~~Ll~l~f~~G~~~A~~~PA~qA~vp~lVpr~~L~~AvALns~~~N~aR~iGPAlgG~Lia~-~G~~~~F~l 174 (524)
T pfam05977 96 AALGLLSPWLLLAFTFLIGIGTALNDPAWQASVGDLVPRRDVPAAVALNSVGYNLARSVGPALGGLLVAA-FGAATAFAV 174 (524)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 9859874999999999999999998789999999857997889899998589988999888999999997-726999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-C
Q ss_conf 888887777888761678864022101111112333100000000025677788763100146888765455431531-1
Q gi|254780967|r 164 MGVITTFITLWYYIRFPETLDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLG-N 242 (398)
Q Consensus 164 ~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 242 (398)
T Consensus 175 nAlSyl~~i~~L~~~~~~~~~~~~p~e~~~~a~~~Glryv~~sp~lr~vl~~~~~~~~~~~~~~aLLPl~Ar~~l~gga~ 254 (524)
T pfam05977 175 NALSYFAVIVAIARWKRDVPPSPLPRENLFGALRAGLRYTAMSREIRSVLVRAAAFGLSASAVWALLPLVARDLLGGDAG 254 (524)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999994787788988888776889999999997096699999999999999999999999999998379814
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01588998865767788999998500156512468877888999999998732577764037998998999999999999
Q gi|254780967|r 243 LFPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIHLLIFIAFFFLASFQFGLINSN 322 (398)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (398)
T Consensus 255 ~yGlLl~~~G~GAv~GAl~l~~lr~~~~~~~lv~~~~~~~a~~~~~la~-------~~~~~l~~~~l~~~G~awi~~lst 327 (524)
T pfam05977 255 FYGILLGAFGAGAVLGALILSRLRRRLSSERLVLLASVGFALCCLSLAL-------SPSLWVAAIALLLGGACWITALST 327 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7899999999889999998898750157243899999999999999996-------518999999999998999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 9999985346-67699999999999999999999999998311799999999999999999999942200034
Q gi|254780967|r 323 FSSISMEPFS-HLAGTASSIFGFINTVISTILGIIIGQSFNGTTYPITIGFFGIAVSSFICILIVEKNQMFRK 394 (398)
Q Consensus 323 ~~~~~~~~~~-~~~G~a~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 394 (398)
T Consensus 328 ~n~~vQ~~~P~wvRgR~lslY~~v~~Ggma~Gs~~WG~vA~~~g~~~aL~--~aa~~l~~~~~~~~~~~l~~~ 398 (524)
T pfam05977 328 LNVAVQLASPRWVVGRALSVYLTVFFGGMAAGSWLWGTVAEALGLTGALL--LAAAALLAGAALGLRLRLPEG 398 (524)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHHCCCCCCC
T ss_conf 98999970879999999999999998567888999999873007499999--999999999998712027886