HHsearch alignment for GI: 254780967 and conserved domain: pfam06779

>pfam06779 DUF1228 Protein of unknown function (DUF1228). This family represents the N-terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many family members are hypothetical proteins.

Probab=98.85  E-value=2.8e-08  Score=62.19  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             99886576699999999998199988999999999999999999999999865082899999999999999985100110
Q gi|254780967|r   12 AINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLSDRFGRKIVMMFGLVIHIISTFIMVTINSF   91 (398)
Q Consensus        12 ~~~~~~~~~~~p~lp~i~~~l~~s~~~~~~~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~~~~~a~~~   91 (398)
T Consensus         5 GigRF---aYTpiLP~M~~~~~ls~~~ag-~lasaNy~GYL~GAl~a~~~~~~~~~~~~~~~gl~~~~~~~~~m~~t~~f   80 (85)
T pfam06779         5 GIGRF---SYTPILPGMMAEGQFSLSDAG-WIASANYAGYLVGALLASFGWSHGRERRVLLGGLLATVLLLAAMALTNGF   80 (85)
T ss_pred             HHHHH---HHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             56999---997561899984599888899-99999999999999999998850258999999999999999999834674


Q ss_pred             HHHC
Q ss_conf             1110
Q gi|254780967|r   92 TGML   95 (398)
Q Consensus        92 ~~l~   95 (398)
T Consensus        81 ~~~~   84 (85)
T pfam06779        81 AAVS   84 (85)
T ss_pred             EEEE
T ss_conf             1012